AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0760080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760080 MtrunA17_Chr5g0408591 98.120 532 9 1 1 532 28 558 0.0 1074
Msa0760080 MtrunA17_Chr4g0038651 47.383 363 183 3 90 444 86 448 6.75e-113 346
Msa0760080 MtrunA17_Chr7g0240501 46.354 384 195 2 75 447 168 551 7.01e-113 349
Msa0760080 MtrunA17_Chr3g0112731 45.596 386 199 4 87 461 96 481 1.15e-110 341
Msa0760080 MtrunA17_Chr5g0436141 45.812 382 196 3 93 463 84 465 7.98e-110 338
Msa0760080 MtrunA17_Chr4g0008771 46.832 363 187 2 91 447 96 458 1.14e-106 329
Msa0760080 MtrunA17_Chr4g0004771 45.961 359 175 6 91 444 90 434 5.11e-105 325
Msa0760080 MtrunA17_Chr2g0331631 46.067 356 181 5 91 444 86 432 3.05e-103 320
Msa0760080 MtrunA17_Chr8g0348921 44.267 375 184 4 90 444 96 465 4.41e-101 312
Msa0760080 MtrunA17_Chr6g0485861 45.455 363 186 6 95 455 100 452 4.43e-100 312
Msa0760080 MtrunA17_Chr7g0247761 39.089 417 186 5 91 444 113 524 9.09e-87 277
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760080 AT1G31650.2 61.651 545 179 8 1 520 2 541 0.0 620
Msa0760080 AT1G31650.1 61.651 545 179 8 1 520 30 569 0.0 619
Msa0760080 AT4G38430.1 47.802 364 181 3 90 444 89 452 2.51e-112 344
Msa0760080 AT5G05940.1 44.872 390 200 3 87 461 98 487 3.61e-110 341
Msa0760080 AT5G02010.1 46.631 371 187 3 90 451 69 437 9.30e-110 338
Msa0760080 AT4G00460.2 41.892 444 212 9 23 444 47 466 5.66e-104 320
Msa0760080 AT4G00460.4 41.892 444 212 9 23 444 47 466 5.66e-104 320
Msa0760080 AT3G24620.1 43.716 366 196 3 88 452 82 438 1.78e-101 316
Msa0760080 AT1G79860.1 45.658 357 181 6 90 444 91 436 1.94e-101 315
Msa0760080 AT4G13240.1 45.152 361 188 4 88 447 71 422 3.33e-100 312
Msa0760080 AT1G01700.1 43.928 387 193 5 72 444 102 478 4.70e-99 308
Msa0760080 AT3G16130.1 41.860 387 211 5 70 453 71 446 6.89e-96 301
Msa0760080 AT5G05940.2 43.860 342 180 2 87 416 98 439 1.02e-95 300
Msa0760080 AT1G52240.1 43.646 362 191 5 87 447 100 449 1.25e-94 298
Msa0760080 AT1G01700.4 40.767 417 193 6 72 444 102 508 1.15e-92 293
Msa0760080 AT3G55660.1 42.975 363 198 4 88 441 104 466 4.19e-92 293
Msa0760080 AT5G19560.1 44.044 361 192 4 88 446 41 393 2.73e-89 283
Msa0760080 AT5G19560.5 44.044 361 192 4 88 446 41 393 2.73e-89 283
Msa0760080 AT5G19560.4 44.044 361 192 4 88 446 60 412 4.89e-89 283
Msa0760080 AT2G45890.1 41.979 374 192 5 88 444 90 455 3.22e-88 279
Msa0760080 AT1G01700.3 42.582 364 178 7 72 414 102 455 6.61e-84 268
Msa0760080 AT4G00460.3 42.515 334 167 5 128 444 8 333 3.33e-82 259
Msa0760080 AT3G55660.2 41.317 334 187 4 88 412 104 437 8.46e-81 259
Msa0760080 AT5G19560.2 42.508 327 178 4 88 412 60 378 2.22e-75 243
Msa0760080 AT4G00460.1 43.253 289 133 5 23 296 47 319 1.32e-66 219
Msa0760080 AT1G01700.5 42.014 288 138 4 27 296 55 331 9.27e-64 213
Msa0760080 AT1G01700.2 42.014 288 138 4 27 296 55 331 9.27e-64 213
Msa0760080 AT5G19560.3 40.449 267 149 4 182 446 5 263 1.90e-51 180

Find 127 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGAACAGTAACTGAATT+TGG 0.215558 5_2:+16309571 None:intergenic
AACAGCTTCCAATTTATTAA+TGG 0.226323 5_2:+16300392 None:intergenic
CCTTGAGACCATTAATAAAT+TGG 0.239944 5_2:-16300400 Msa0760080:CDS
TGATAAACTTGAGTTATTAT+TGG 0.246352 5_2:-16300274 Msa0760080:CDS
TTGACAGCTGAATCAACTTC+TGG 0.292107 5_2:-16300468 Msa0760080:CDS
TCAGGAATTATGACATATAA+TGG 0.295381 5_2:-16302436 Msa0760080:intron
TTGTTATCTCTGTAGGATAT+TGG 0.303057 5_2:-16299989 Msa0760080:intron
GAAGCGTATTCCAGAGTTCT+TGG 0.321753 5_2:-16299953 Msa0760080:CDS
AAGAAAGAGGTTGGTTCATC+AGG 0.325300 5_2:-16300911 Msa0760080:CDS
AAGAAATGTTTGAGGAAGAT+TGG 0.333774 5_2:+16300209 None:intergenic
ATTTGGCAGCCTTGAATACT+TGG 0.340330 5_2:+16300875 None:intergenic
CTGCATAACAATGCAATCTA+AGG 0.341741 5_2:-16309366 Msa0760080:intron
CTCTTTCTTTCTTCAGATAG+AGG 0.341999 5_2:+16301523 None:intergenic
TCAGAGATATTATTTATTCC+AGG 0.347750 5_2:+16299845 None:intergenic
TTACTTGGTGAAGATGTTAC+TGG 0.354068 5_2:-16302121 Msa0760080:CDS
CAATGGTGAAAACAGAGTTT+TGG 0.364768 5_2:-16301044 Msa0760080:CDS
GAGCAAATGGCGAAGAGAAA+TGG 0.382512 5_2:-16301503 Msa0760080:CDS
GTGTAGCTATTATCACATCT+TGG 0.389486 5_2:+16299705 None:intergenic
ATGAACCAACCTCTTTCTTT+CGG 0.392462 5_2:+16300915 None:intergenic
GGATATTGGACATTCCATTC+TGG 0.394307 5_2:-16299975 Msa0760080:CDS
TCTTCAAGCAAAGATGCGTT+TGG 0.398072 5_2:-16302307 Msa0760080:CDS
CAAAGTGTTTAACAATGAAA+AGG 0.400663 5_2:-16302273 Msa0760080:CDS
GATGCTGCTAAAGTTCAATA+TGG 0.402749 5_2:-16300186 Msa0760080:CDS
TAAGCATAGAGTCCAACTTC+TGG 0.406157 5_2:+16301263 None:intergenic
CAAATTCAGTTACTGTTCAT+AGG 0.409567 5_2:-16309570 Msa0760080:five_prime_UTR
GATGAGAATAAAGTAATGTA+TGG 0.412466 5_2:+16309501 None:intergenic
CACACTCATGTCTTTCCCTT+CGG 0.412875 5_2:+16300999 None:intergenic
TGTAGCTATTATCACATCTT+GGG 0.415683 5_2:+16299706 None:intergenic
TGAATGTCTGCACGAGCTTT+AGG 0.436123 5_2:+16301304 None:intergenic
AATCACCGGTTCGAACTTCA+TGG 0.438603 5_2:-16300326 Msa0760080:CDS
AGAAATGTTTGAGGAAGATT+GGG 0.439291 5_2:+16300210 None:intergenic
AGAACTATGGAACAAGTTAC+TGG 0.440000 5_2:-16300351 Msa0760080:CDS
ACTGTCTCCTACAAACTATA+TGG 0.440626 5_2:-16301473 Msa0760080:CDS
AGTTTATCAGCTTCTGACAT+AGG 0.450031 5_2:+16300288 None:intergenic
TTTAGCATATTGTCTAGAAT+AGG 0.451697 5_2:-16299920 Msa0760080:CDS
TGGCTTCAATATCTGAATGT+TGG 0.456977 5_2:+16302167 None:intergenic
AGCTCAACCATATAGTTTGT+AGG 0.458810 5_2:+16301466 None:intergenic
AGATGTTACTGGAGGAACTA+AGG 0.464313 5_2:-16302110 Msa0760080:CDS
CTGAAGAAAGAAAGAGCAAA+TGG 0.467672 5_2:-16301516 Msa0760080:CDS
GGTCTCAAGGGCCATATGTT+CGG 0.469228 5_2:+16300413 None:intergenic
AAAGTGTTTAACAATGAAAA+GGG 0.471202 5_2:-16302272 Msa0760080:CDS
TAAGGGCATCACTACAGCTT+TGG 0.471817 5_2:-16302092 Msa0760080:CDS
AACTCACTAAGTTGCTCCCC+TGG 0.474068 5_2:-16299863 Msa0760080:CDS
CAATTTGAAATCCGAACATA+TGG 0.474139 5_2:-16300424 Msa0760080:CDS
GAGTCCAACTTCTGGAGTGC+TGG 0.477913 5_2:+16301271 None:intergenic
GGATATAAGAATAGAGAGAG+AGG 0.483365 5_2:+16309536 None:intergenic
ATGAACAAGGACTTGAAGAA+TGG 0.484384 5_2:-16302246 Msa0760080:CDS
AATGCCATCACAAATTTGTC+AGG 0.484710 5_2:-16302061 Msa0760080:intron
ATCATCATCATCAAATGAAT+CGG 0.488207 5_2:+16302339 None:intergenic
AAAGTATGGACTTACTCTCT+TGG 0.489829 5_2:+16306952 None:intergenic
TCTTCCAGCACTCCAGAAGT+TGG 0.489929 5_2:-16301275 Msa0760080:CDS
GGCTAAATTTCCAAGAACTC+TGG 0.491194 5_2:+16299943 None:intergenic
GGTGGTACGCCAAGTATTCA+AGG 0.491614 5_2:-16300884 Msa0760080:CDS
CCAATTTATTAATGGTCTCA+AGG 0.492231 5_2:+16300400 None:intergenic
AGCAGAACAAGTAGAGGAGA+CGG 0.494848 5_2:-16302370 Msa0760080:CDS
TGAACAAGGACTTGAAGAAT+GGG 0.498886 5_2:-16302245 Msa0760080:CDS
TAAATAATATCTCTGAAACT+TGG 0.499561 5_2:-16299838 Msa0760080:CDS
GTTTATCAGCTTCTGACATA+GGG 0.501172 5_2:+16300289 None:intergenic
TGCCAATGGTAGAATCTTTG+AGG 0.504782 5_2:-16301422 Msa0760080:intron
AGTTTGTTAGAGCTTAACTT+TGG 0.505063 5_2:+16299346 None:intergenic
GAGGGAGGAAGCAGGACCGA+AGG 0.507585 5_2:-16301015 Msa0760080:CDS
ACAGGATGCACTTGATTCAA+TGG 0.509215 5_2:-16301061 Msa0760080:intron
CCTTGTGCAGTTCTTGTCCA+AGG 0.510155 5_2:+16300493 None:intergenic
GCAGCATCAAGAAATGTTTG+AGG 0.512844 5_2:+16300201 None:intergenic
TGATACCGAAAGAAAGAGGT+TGG 0.513523 5_2:-16300920 Msa0760080:CDS
AAGAATAGAGAGAGAGGGGA+AGG 0.513815 5_2:+16309542 None:intergenic
CAATTTATTAATGGTCTCAA+GGG 0.515889 5_2:+16300401 None:intergenic
CAGAGATATTATTTATTCCA+GGG 0.516460 5_2:+16299846 None:intergenic
TTCAGATATTGAAGCCATGA+AGG 0.518288 5_2:-16302161 Msa0760080:CDS
CTCGTTGAAAGAGAGAACTA+TGG 0.524461 5_2:-16300364 Msa0760080:CDS
GGGATGTTTAGAATGAAGAA+AGG 0.525317 5_2:-16307023 Msa0760080:intron
CACCAAGCAGGAGTAGTGTC+TGG 0.526331 5_2:-16299685 Msa0760080:CDS
AATGTATGGAGGAAGAAGAA+TGG 0.526877 5_2:+16309515 None:intergenic
GACTAGCTTGCTGCAGCAGA+GGG 0.530037 5_2:-16307001 Msa0760080:five_prime_UTR
TACCTCAAAGATTCTACCAT+TGG 0.531632 5_2:+16301420 None:intergenic
TTGCATTGTTATGCAGTGAA+AGG 0.533000 5_2:+16309373 None:intergenic
GATATAAGAATAGAGAGAGA+GGG 0.537060 5_2:+16309537 None:intergenic
GAGAATAAAGTAATGTATGG+AGG 0.538610 5_2:+16309504 None:intergenic
TATTCTAGACAATATGCTAA+AGG 0.538905 5_2:+16299922 None:intergenic
ATATAAGAATAGAGAGAGAG+GGG 0.543473 5_2:+16309538 None:intergenic
CACCAGACACTACTCCTGCT+TGG 0.546870 5_2:+16299683 None:intergenic
AAAGACCATGAAGTTCGAAC+CGG 0.547808 5_2:+16300321 None:intergenic
TCTGGAATACGCTTCCAGAA+TGG 0.548749 5_2:+16299961 None:intergenic
TAATATCTCTGAAACTTGGA+TGG 0.549387 5_2:-16299834 Msa0760080:CDS
GAATGTTGGATTGCATAAGA+AGG 0.550363 5_2:+16302181 None:intergenic
AAACAATCAGTCTTATGAAG+AGG 0.554003 5_2:-16302395 Msa0760080:CDS
TTTCTGATACCGAAAGAAAG+AGG 0.554133 5_2:-16300924 Msa0760080:CDS
TTCTATGTTGCAGTCTGGAA+AGG 0.559632 5_2:-16300520 Msa0760080:intron
AGAGATATTATTTATTCCAG+GGG 0.565546 5_2:+16299847 None:intergenic
TATTAGAGATGCACTTGCAA+AGG 0.565718 5_2:-16300809 Msa0760080:intron
AGTGCATCTCTAATAACTGT+TGG 0.565972 5_2:+16300817 None:intergenic
GATGTTACTGGAGGAACTAA+GGG 0.566443 5_2:-16302109 Msa0760080:CDS
AGAAAGAGGTTGGTTCATCA+GGG 0.566470 5_2:-16300910 Msa0760080:CDS
AGGGAGGAAGCAGGACCGAA+GGG 0.567526 5_2:-16301014 Msa0760080:CDS
TGATAATAGCTACACCAAGC+AGG 0.570801 5_2:-16299697 Msa0760080:CDS
GGTTCAATAGTGCTGGTGAT+GGG 0.572105 5_2:+16309394 None:intergenic
GTTCTTTATTGACAATGAAG+AGG 0.574025 5_2:-16299496 Msa0760080:three_prime_UTR
TGTTTAGAATGCAACTCTCA+AGG 0.576910 5_2:+16302413 None:intergenic
CAAAAGATGAACAAAGCAGA+TGG 0.584707 5_2:-16299782 Msa0760080:CDS
GGTATGGTGAGGGAGGAAGC+AGG 0.588600 5_2:-16301023 Msa0760080:CDS
CAGTCTGGAAAGGCAAACCT+TGG 0.594632 5_2:-16300510 Msa0760080:CDS
ACAAGTTACTGGCAAATCAC+CGG 0.594634 5_2:-16300340 Msa0760080:CDS
GAGGAAAGCAGAACAAGTAG+AGG 0.594944 5_2:-16302376 Msa0760080:CDS
GGACTAGCTTGCTGCAGCAG+AGG 0.599307 5_2:-16307002 Msa0760080:five_prime_UTR
AGGTTCAATAGTGCTGGTGA+TGG 0.599842 5_2:+16309393 None:intergenic
TGCTAAAGTTCAATATGGCA+AGG 0.601273 5_2:-16300181 Msa0760080:intron
TCTCTAATAACTGTTGGCAC+AGG 0.604103 5_2:+16300823 None:intergenic
AATAGGAGATATATTACAAG+AGG 0.605594 5_2:-16299903 Msa0760080:CDS
AGTGAAAGGTTCAATAGTGC+TGG 0.606853 5_2:+16309387 None:intergenic
CAATGTCCAATCAAATTCAA+CGG 0.609901 5_2:-16309595 None:intergenic
GAGGTTGGTTCATCAGGGAA+AGG 0.610824 5_2:-16300905 Msa0760080:CDS
TATCTCTGAAACTTGGATGG+TGG 0.612314 5_2:-16299831 Msa0760080:CDS
TCACTTTAACAAATGTACTG+TGG 0.612760 5_2:+16307066 None:intergenic
CCTTGGACAAGAACTGCACA+AGG 0.620947 5_2:-16300493 Msa0760080:CDS
AATGGCGAAGAGAAATGGAC+TGG 0.621786 5_2:-16301498 Msa0760080:CDS
GCTAAGCAAAACAATGCCAA+TGG 0.628095 5_2:-16301436 Msa0760080:CDS
CTTGGTGAAGATGTTACTGG+AGG 0.629794 5_2:-16302118 Msa0760080:CDS
ATGAAAAGGGAGGATGAACA+AGG 0.630346 5_2:-16302259 Msa0760080:CDS
CATACCTGACAAATTTGTGA+TGG 0.631933 5_2:+16302057 None:intergenic
GTTGGTTCATCAGGGAAAGG+TGG 0.638880 5_2:-16300902 Msa0760080:CDS
TGTCTGGTGCATTAGTAGAG+AGG 0.658828 5_2:-16299669 Msa0760080:CDS
AGAACAAGTAGAGGAGACGG+AGG 0.669728 5_2:-16302367 Msa0760080:CDS
GTGTGCGGCATAGTAAAAGA+TGG 0.678764 5_2:-16300981 Msa0760080:CDS
GTGTTTAACAATGAAAAGGG+AGG 0.680778 5_2:-16302269 Msa0760080:CDS
TGCGGCATAGTAAAAGATGG+TGG 0.684737 5_2:-16300978 Msa0760080:CDS
AAGGGAAAGACATGAGTGTG+CGG 0.684788 5_2:-16300996 Msa0760080:CDS
GCTGTAAAAGTGTTTCAGCA+CGG 0.690145 5_2:+16300250 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAATAAATTCATACA+CGG + chr5_2:16300954-16300973 None:intergenic 10.0%
!!! TACTTTTTTTTTTTTTTTGA+AGG - chr5_2:16301180-16301199 Msa0760080:intron 10.0%
!!! TAGTTTATCTTTTTTTTTTT+TGG - chr5_2:16301261-16301280 Msa0760080:CDS 10.0%
!! CTAAAAAAAATACAAAATTA+AGG + chr5_2:16301478-16301497 None:intergenic 10.0%
!!! TTGTTTAGAATAATATATTT+TGG - chr5_2:16301811-16301830 Msa0760080:intron 10.0%
!! TAAAAAAAATTATAACAAAC+GGG + chr5_2:16302136-16302155 None:intergenic 10.0%
!!! TCATTTTGTTATAATTTTTT+TGG - chr5_2:16302281-16302300 Msa0760080:CDS 10.0%
!!! AGAGATTTTTTTAAAATTTT+AGG + chr5_2:16302309-16302328 None:intergenic 10.0%
!!! ATTTTTAAAAATGGATTTTT+TGG + chr5_2:16302501-16302520 None:intergenic 10.0%
!!! TTTCTTTGTATTTTTAAAAA+TGG + chr5_2:16302510-16302529 None:intergenic 10.0%
!!! TTTTTAAAATCTAAAACAAA+CGG - chr5_2:16302538-16302557 Msa0760080:intron 10.0%
!!! TAATTTTATTTATTATCACA+TGG - chr5_2:16303101-16303120 Msa0760080:intron 10.0%
!! AATTTGTAATATTAAAATGT+GGG + chr5_2:16304211-16304230 None:intergenic 10.0%
!! AAATTTGTAATATTAAAATG+TGG + chr5_2:16304212-16304231 None:intergenic 10.0%
!!! TTAATTTCTTTTACATTTTA+CGG + chr5_2:16305064-16305083 None:intergenic 10.0%
!!! TTTTATTTTAATTTCAAGTT+TGG + chr5_2:16305594-16305613 None:intergenic 10.0%
!!! TAAATTTTTTACATTGTTAT+TGG + chr5_2:16306113-16306132 None:intergenic 10.0%
!! TTAAAGTTTCTTTAATATTA+TGG - chr5_2:16306179-16306198 Msa0760080:intron 10.0%
!!! TTTGTGTGAATAATTTTTTT+TGG + chr5_2:16300365-16300384 None:intergenic 15.0%
!!! AATTAAGGTTTAAATTTTCA+AGG - chr5_2:16300449-16300468 Msa0760080:CDS 15.0%
!!! TTTTAAATAAATTCATACAC+GGG + chr5_2:16300953-16300972 None:intergenic 15.0%
!!! TTCTAAAATCAAAATATGAT+TGG + chr5_2:16300982-16301001 None:intergenic 15.0%
!!! TAGAAGTTCTTAAATTTTTT+TGG - chr5_2:16300997-16301016 Msa0760080:CDS 15.0%
!!! AGAAGTTCTTAAATTTTTTT+GGG - chr5_2:16300998-16301017 Msa0760080:CDS 15.0%
!!! TTTATCTTTTTTTTTTTTGG+AGG - chr5_2:16301264-16301283 Msa0760080:CDS 15.0%
!! TATTCACCAAAAAAAAATTT+AGG - chr5_2:16301387-16301406 Msa0760080:intron 15.0%
!!! TAATTTTATAATGAGACTTT+GGG - chr5_2:16301417-16301436 Msa0760080:intron 15.0%
!!! GTATATAGTATTTTTAACAT+AGG - chr5_2:16301506-16301525 Msa0760080:CDS 15.0%
!!! TTTTAACAAAGAAATTTTCA+AGG - chr5_2:16302196-16302215 Msa0760080:CDS 15.0%
!!! TTTTAAAATCTAAAACAAAC+GGG - chr5_2:16302539-16302558 Msa0760080:intron 15.0%
!! TATATAAATGTACTACAAAT+GGG + chr5_2:16302565-16302584 None:intergenic 15.0%
!! ATATATAAATGTACTACAAA+TGG + chr5_2:16302566-16302585 None:intergenic 15.0%
!!! CTTTTACTTCATTTTTTATT+TGG + chr5_2:16302704-16302723 None:intergenic 15.0%
!!! TTCAATATTTAAGTTTACTA+TGG - chr5_2:16303069-16303088 Msa0760080:intron 15.0%
!! TTAAATTTAAGTAACCAAAA+CGG + chr5_2:16303348-16303367 None:intergenic 15.0%
!! ATTATCATTATCAAAAACAA+AGG + chr5_2:16304069-16304088 None:intergenic 15.0%
!! ATTACAAATTTCTTACTATT+TGG - chr5_2:16304221-16304240 Msa0760080:intron 15.0%
!!! AATCCATTATAAGAAATTTT+AGG - chr5_2:16304463-16304482 Msa0760080:intron 15.0%
!! TTACCTAAAATTTCTTATAA+TGG + chr5_2:16304469-16304488 None:intergenic 15.0%
!!! TAAGTTTTCATGTAAAATTT+CGG + chr5_2:16304659-16304678 None:intergenic 15.0%
!!! ATTTTTAAAAACATAACAGT+AGG - chr5_2:16304774-16304793 Msa0760080:intron 15.0%
!!! TATTATTTAAAAGAAAGTGT+TGG - chr5_2:16304973-16304992 Msa0760080:intron 15.0%
!!! ATTATTTAAAAGAAAGTGTT+GGG - chr5_2:16304974-16304993 Msa0760080:intron 15.0%
!!! TTAAAACCATGTTATATTTT+TGG + chr5_2:16306215-16306234 None:intergenic 15.0%
!!! ATAACATGGTTTTAATTAAT+TGG - chr5_2:16306220-16306239 Msa0760080:intron 15.0%
!!! ATATTTATGATTTTCCAAAA+GGG + chr5_2:16306457-16306476 None:intergenic 15.0%
!!! AATATTTATGATTTTCCAAA+AGG + chr5_2:16306458-16306477 None:intergenic 15.0%
!!! ATTCATTTCTATTTTTCTTT+CGG - chr5_2:16307316-16307335 Msa0760080:intron 15.0%
!! TCAGATATAAAAAAAATCTA+TGG + chr5_2:16309325-16309344 None:intergenic 15.0%
!!! ATTAATATGAAGTTTTAAGC+TGG + chr5_2:16299628-16299647 None:intergenic 20.0%
!!! TTGTCTTTTAAAAATAGATC+TGG - chr5_2:16300198-16300217 Msa0760080:CDS 20.0%
!! TAGAAAAAATCATTGAATGT+TGG - chr5_2:16300235-16300254 Msa0760080:CDS 20.0%
!! AGATAAGATAAGCATAATTA+AGG - chr5_2:16300434-16300453 Msa0760080:CDS 20.0%
!! TCAATAACCATGAATAAATT+AGG - chr5_2:16300618-16300637 Msa0760080:intron 20.0%
!! TTTCTTACCTAATTTATTCA+TGG + chr5_2:16300628-16300647 None:intergenic 20.0%
!!! CAATGTTCTTTTTAATCTAA+TGG - chr5_2:16300787-16300806 Msa0760080:intron 20.0%
!! TTTAAATAAATTCATACACG+GGG + chr5_2:16300952-16300971 None:intergenic 20.0%
!!! GTTAACCATTTGATTTTTAT+GGG - chr5_2:16301020-16301039 Msa0760080:CDS 20.0%
!! CTCAAATTATATTTATCTCT+CGG + chr5_2:16301073-16301092 None:intergenic 20.0%
!!! TTTTTTTTTTTTGAAGGAAG+TGG - chr5_2:16301186-16301205 Msa0760080:intron 20.0%
!!! TTTACTTTTGTACAAACATA+TGG - chr5_2:16301340-16301359 Msa0760080:intron 20.0%
!!! AATTTTTTTTTGGTGAATAC+AGG + chr5_2:16301386-16301405 None:intergenic 20.0%
!! AAGTCTCATTATAAAATTAC+AGG + chr5_2:16301416-16301435 None:intergenic 20.0%
!!! GTAATTTTATAATGAGACTT+TGG - chr5_2:16301416-16301435 Msa0760080:intron 20.0%
!!! TAGTATTTTTAACATAGGTA+TGG - chr5_2:16301511-16301530 Msa0760080:CDS 20.0%
!!! TAATATATTTTGGACATTGT+TGG - chr5_2:16301821-16301840 Msa0760080:intron 20.0%
!!! AACTCTGTATGTTTTATTTT+TGG - chr5_2:16302012-16302031 Msa0760080:intron 20.0%
!!! TTTTAAGAGGGTTTTTTTTA+GGG + chr5_2:16302648-16302667 None:intergenic 20.0%
!! AATGATACATTAAAATTCCA+TGG - chr5_2:16303044-16303063 Msa0760080:intron 20.0%
!! AACTTAAATATTGAATTCCA+TGG + chr5_2:16303064-16303083 None:intergenic 20.0%
!!! ATTTTAAAGTCAATTTGCTA+TGG + chr5_2:16303187-16303206 None:intergenic 20.0%
!!! TTTAAAATAGAGAAGATTTC+AGG - chr5_2:16303389-16303408 Msa0760080:intron 20.0%
!! TTAAAATAGAGAAGATTTCA+GGG - chr5_2:16303390-16303409 Msa0760080:intron 20.0%
!!! GTTTTGTCATTTCATAAATT+TGG + chr5_2:16303458-16303477 None:intergenic 20.0%
!!! GATAATGATAATGATAATGA+AGG - chr5_2:16304077-16304096 Msa0760080:intron 20.0%
!!! CAAAAATACCATATTTTTGA+AGG - chr5_2:16304108-16304127 Msa0760080:intron 20.0%
!! AAATTTCTTACTATTTGGAT+AGG - chr5_2:16304226-16304245 Msa0760080:intron 20.0%
!! TTTCTCTCTTTCTAATTATT+AGG - chr5_2:16304308-16304327 Msa0760080:intron 20.0%
!! TTATCAAATGAAAAAAAGGT+AGG + chr5_2:16304858-16304877 None:intergenic 20.0%
!! CGAATTATCAAATGAAAAAA+AGG + chr5_2:16304862-16304881 None:intergenic 20.0%
!!! TTATTTAAAAGAAAGTGTTG+GGG - chr5_2:16304975-16304994 Msa0760080:intron 20.0%
!! ATAAATTAACGATCATTTGT+AGG + chr5_2:16305176-16305195 None:intergenic 20.0%
!!! GATCGTTAATTTATTAGTTT+AGG - chr5_2:16305182-16305201 Msa0760080:intron 20.0%
!!! TATTTTGATAAATAAGGTCA+TGG - chr5_2:16305442-16305461 Msa0760080:intron 20.0%
!! AATCAAATAGTACATTAGTA+CGG + chr5_2:16305557-16305576 None:intergenic 20.0%
!!! TCTAGCAAACATTTTTAAAA+AGG - chr5_2:16305708-16305727 Msa0760080:intron 20.0%
!!! AGTTGATACAAACTTTTATA+CGG + chr5_2:16305932-16305951 None:intergenic 20.0%
!!! ACAAATATGTTTGTTACAAA+TGG + chr5_2:16306013-16306032 None:intergenic 20.0%
!! ATGTAACCAAAAATATAACA+TGG - chr5_2:16306206-16306225 Msa0760080:intron 20.0%
!!! TTTTAATTAATTGGAAACCA+TGG - chr5_2:16306229-16306248 Msa0760080:intron 20.0%
!!! AATATATTCTTGCATTGTTT+TGG - chr5_2:16306315-16306334 Msa0760080:intron 20.0%
!!! TATTTATGATTTTCCAAAAG+GGG + chr5_2:16306456-16306475 None:intergenic 20.0%
!!! AAAGTGTTTAACAATGAAAA+GGG - chr5_2:16306667-16306686 Msa0760080:intron 20.0%
!!! AATTTTTCAAAGCTTTTACT+TGG - chr5_2:16306803-16306822 Msa0760080:intron 20.0%
!!! AATCATGTTAATTTTAGACT+AGG + chr5_2:16307053-16307072 None:intergenic 20.0%
!!! AAATTAACATGATTCGTTTT+AGG - chr5_2:16307059-16307078 Msa0760080:five_prime_UTR 20.0%
!!! TGACACTTTAAAAAAGATAA+AGG - chr5_2:16307247-16307266 Msa0760080:intron 20.0%
!!! AACAAAACTTTCTTATTTAG+TGG + chr5_2:16307596-16307615 None:intergenic 20.0%
!!! AAATAAGAAAGTTTTGTTCT+TGG - chr5_2:16307598-16307617 Msa0760080:intron 20.0%
!! AATCACATATTAAGTGTATA+CGG + chr5_2:16308219-16308238 None:intergenic 20.0%
!! TATACACTTAATATGTGATT+TGG - chr5_2:16308219-16308238 Msa0760080:intron 20.0%
!! TGATAAACTTGAGTTATTAT+TGG - chr5_2:16308665-16308684 Msa0760080:intron 20.0%
!!! TAAATAATATCTCTGAAACT+TGG - chr5_2:16309101-16309120 Msa0760080:intron 20.0%
! GATGAGAATAAAGTAATGTA+TGG + chr5_2:16299441-16299460 None:intergenic 25.0%
!!! GTCTATATTTTTTACTGTTC+TGG - chr5_2:16299725-16299744 Msa0760080:CDS 25.0%
! TTGATTGTGTTAATGTTCAT+GGG + chr5_2:16300104-16300123 None:intergenic 25.0%
! TTTGATTGTGTTAATGTTCA+TGG + chr5_2:16300105-16300124 None:intergenic 25.0%
! TCTTGAAATCACAAAGTTAA+CGG - chr5_2:16300135-16300154 Msa0760080:intron 25.0%
!! ATTCGATTTGATTTCTATAG+AGG + chr5_2:16300400-16300419 None:intergenic 25.0%
!!! TAAGGTTTAAATTTTCAAGG+TGG - chr5_2:16300452-16300471 Msa0760080:CDS 25.0%
!!! AAGGTTTAAATTTTCAAGGT+GGG - chr5_2:16300453-16300472 Msa0760080:CDS 25.0%
!! GAACATGAAGATGATTTTAA+TGG + chr5_2:16300492-16300511 None:intergenic 25.0%
! AAAGTAAGAAAGATATAGTG+TGG - chr5_2:16300746-16300765 Msa0760080:intron 25.0%
!!! AACTTTACTTAATTTGTGTG+TGG - chr5_2:16300819-16300838 Msa0760080:CDS 25.0%
!!! ATAACAAAAGGTACTCATTA+TGG + chr5_2:16300912-16300931 None:intergenic 25.0%
!!! GGTTAACCATTTGATTTTTA+TGG - chr5_2:16301019-16301038 Msa0760080:CDS 25.0%
! TCTTACCCATAAAAATCAAA+TGG + chr5_2:16301028-16301047 None:intergenic 25.0%
! AATTTAGGTAGCTTATTAAG+TGG - chr5_2:16301151-16301170 Msa0760080:intron 25.0%
! ATATGGCACCTTATTAATTT+AGG - chr5_2:16301357-16301376 Msa0760080:intron 25.0%
! TCACCAAAAAAAAATTTAGG+TGG - chr5_2:16301390-16301409 Msa0760080:intron 25.0%
! TTCGAAATTAATGTATACTG+AGG + chr5_2:16301731-16301750 None:intergenic 25.0%
! TTTCGAAATTTCATAAAGTG+TGG - chr5_2:16301744-16301763 Msa0760080:intron 25.0%
! TTCGAAATTTCATAAAGTGT+GGG - chr5_2:16301745-16301764 Msa0760080:intron 25.0%
! ACATACAGAGTTTAAAAGTA+TGG + chr5_2:16302004-16302023 None:intergenic 25.0%
!! TTGATCTAACTTTCTGTTTT+CGG - chr5_2:16302076-16302095 Msa0760080:CDS 25.0%
!!! TTTAAGAGGGTTTTTTTTAG+GGG + chr5_2:16302647-16302666 None:intergenic 25.0%
!!! GTTTTAAGAGGGTTTTTTTT+AGG + chr5_2:16302649-16302668 None:intergenic 25.0%
! TATCAAATTGTTTGTCACAT+TGG + chr5_2:16302727-16302746 None:intergenic 25.0%
! ATAAATGTGTCCTACAATAA+AGG + chr5_2:16302877-16302896 None:intergenic 25.0%
!! GGTTACTTAAATTTAAAGCA+AGG - chr5_2:16303352-16303371 Msa0760080:intron 25.0%
! TATCATGTTAGATGTGATAT+GGG - chr5_2:16303617-16303636 Msa0760080:intron 25.0%
! TTGATTTATATCAAGCAAGT+AGG - chr5_2:16303650-16303669 Msa0760080:intron 25.0%
! TGAGCTAAATCTTTATCAAT+TGG - chr5_2:16304024-16304043 Msa0760080:intron 25.0%
! TCAATTGGACTAATTTACTT+TGG - chr5_2:16304039-16304058 Msa0760080:intron 25.0%
! TTTAGTGTCCTTCAAAAATA+TGG + chr5_2:16304119-16304138 None:intergenic 25.0%
! TTGTAATATTAAAATGTGGG+TGG + chr5_2:16304208-16304227 None:intergenic 25.0%
!!! TATGTTTTTCAATGCAAAGT+TGG - chr5_2:16304586-16304605 Msa0760080:intron 25.0%
!!! AATGCAAAGTTGGTTTTTTT+GGG - chr5_2:16304596-16304615 Msa0760080:intron 25.0%
! TTTAAAAACATAACAGTAGG+TGG - chr5_2:16304777-16304796 Msa0760080:intron 25.0%
! CAAGTAAAAACACATTAAAG+TGG - chr5_2:16305291-16305310 Msa0760080:intron 25.0%
! CTTTAGTGTTTATAATCTCA+CGG - chr5_2:16305329-16305348 Msa0760080:intron 25.0%
! ATGTCATAGTAATACTAACA+TGG + chr5_2:16305790-16305809 None:intergenic 25.0%
! CATATTAATGTACTATTGCT+AGG + chr5_2:16305862-16305881 None:intergenic 25.0%
! TACTCAAAGAACTTTGAATA+AGG + chr5_2:16306047-16306066 None:intergenic 25.0%
!!! GTTTAGTCATATGCTATTTT+TGG - chr5_2:16306253-16306272 Msa0760080:intron 25.0%
!!! CTTAGTTTTATTTGTGTCAA+AGG - chr5_2:16306369-16306388 Msa0760080:intron 25.0%
!! ACTATGTTCTAGACTATATT+TGG - chr5_2:16306396-16306415 Msa0760080:intron 25.0%
!!! TTTTTATAATGGAACCTTTC+AGG - chr5_2:16306485-16306504 Msa0760080:intron 25.0%
! TATATGTCATAATTCCTGAA+AGG + chr5_2:16306502-16306521 None:intergenic 25.0%
! TCAGGAATTATGACATATAA+TGG - chr5_2:16306503-16306522 Msa0760080:intron 25.0%
! ATCATCATCATCAAATGAAT+CGG + chr5_2:16306603-16306622 None:intergenic 25.0%
!! CAAAGTGTTTAACAATGAAA+AGG - chr5_2:16306666-16306685 Msa0760080:intron 25.0%
! TCTTTGACATAAAAATGTTG+AGG + chr5_2:16306734-16306753 None:intergenic 25.0%
!!! CTTTGAAAAATTTTCCTTCA+TGG + chr5_2:16306795-16306814 None:intergenic 25.0%
! TTTAAAAACGTCAACATTGT+TGG - chr5_2:16306931-16306950 Msa0760080:intron 25.0%
! TAAGCTCTTGACTATTTAAA+AGG - chr5_2:16306965-16306984 Msa0760080:intron 25.0%
! ATGAACGTTGAATTATACTA+TGG + chr5_2:16307151-16307170 None:intergenic 25.0%
! GATCATATAAGTACATAGAT+TGG + chr5_2:16307356-16307375 None:intergenic 25.0%
! ATCTTTACTAGCAACATATT+AGG - chr5_2:16307819-16307838 Msa0760080:intron 25.0%
!! TATTTGGATTATTTGTTGAC+AGG - chr5_2:16307860-16307879 Msa0760080:intron 25.0%
!! CACATTTTCATTGATAGATT+TGG + chr5_2:16308084-16308103 None:intergenic 25.0%
! AATAAATTCTAATGCATCGA+AGG - chr5_2:16308186-16308205 Msa0760080:intron 25.0%
! TGACTATTTGATTATAACCT+AGG - chr5_2:16308309-16308328 Msa0760080:intron 25.0%
! CAATTTATTAATGGTCTCAA+GGG + chr5_2:16308541-16308560 None:intergenic 25.0%
! AACAGCTTCCAATTTATTAA+TGG + chr5_2:16308550-16308569 None:intergenic 25.0%
!! TTGGTTTCTTTAGTTTAGAA+AGG + chr5_2:16308853-16308872 None:intergenic 25.0%
! TATTCTAGACAATATGCTAA+AGG + chr5_2:16309020-16309039 None:intergenic 25.0%
!! TTTAGCATATTGTCTAGAAT+AGG - chr5_2:16309019-16309038 Msa0760080:intron 25.0%
! AATAGGAGATATATTACAAG+AGG - chr5_2:16309036-16309055 Msa0760080:intron 25.0%
! AGAGATATTATTTATTCCAG+GGG + chr5_2:16309095-16309114 None:intergenic 25.0%
! CAGAGATATTATTTATTCCA+GGG + chr5_2:16309096-16309115 None:intergenic 25.0%
! TCAGAGATATTATTTATTCC+AGG + chr5_2:16309097-16309116 None:intergenic 25.0%
!!! TTTGTTCATCTTTTGAAGTA+AGG + chr5_2:16309152-16309171 None:intergenic 25.0%
CTATGAACAGTAACTGAATT+TGG + chr5_2:16299371-16299390 None:intergenic 30.0%
CAAATTCAGTTACTGTTCAT+AGG - chr5_2:16299369-16299388 Msa0760080:three_prime_UTR 30.0%
ATATAAGAATAGAGAGAGAG+GGG + chr5_2:16299404-16299423 None:intergenic 30.0%
GATATAAGAATAGAGAGAGA+GGG + chr5_2:16299405-16299424 None:intergenic 30.0%
GAGAATAAAGTAATGTATGG+AGG + chr5_2:16299438-16299457 None:intergenic 30.0%
!!! AGACAAGTTACTTTTTCACA+TGG - chr5_2:16299807-16299826 Msa0760080:CDS 30.0%
!!! GACAAGTTACTTTTTCACAT+GGG - chr5_2:16299808-16299827 Msa0760080:CDS 30.0%
AGTGTTCGATTTAATACTGA+CGG + chr5_2:16299885-16299904 None:intergenic 30.0%
!! TAAAGAAGATGAGTTTGTTG+AGG + chr5_2:16299908-16299927 None:intergenic 30.0%
CATCCACTTGATATATTTGT+AGG - chr5_2:16299939-16299958 Msa0760080:CDS 30.0%
ACACCTACAAATATATCAAG+TGG + chr5_2:16299945-16299964 None:intergenic 30.0%
CTTGAAATCACAAAGTTAAC+GGG - chr5_2:16300136-16300155 Msa0760080:intron 30.0%
ATTGAATGTTGGAGAACATT+AGG - chr5_2:16300246-16300265 Msa0760080:CDS 30.0%
!! ATTTTAATGGCCAAAACAAC+AGG + chr5_2:16300479-16300498 None:intergenic 30.0%
AGTCAAAAGAATCAGAAAGA+GGG + chr5_2:16300880-16300899 None:intergenic 30.0%
TAGTCAAAAGAATCAGAAAG+AGG + chr5_2:16300881-16300900 None:intergenic 30.0%
! AGGTAAAAGTGCATAACAAA+AGG + chr5_2:16300924-16300943 None:intergenic 30.0%
CTTTACAGAAAGATTCAACA+TGG - chr5_2:16301126-16301145 Msa0760080:intron 30.0%
AGATTCAACATGGCAAATTT+AGG - chr5_2:16301136-16301155 Msa0760080:intron 30.0%
!!! AGGCCACCTAAATTTTTTTT+TGG + chr5_2:16301396-16301415 None:intergenic 30.0%
TCCATGGTCATTAATTGATT+TGG - chr5_2:16301443-16301462 Msa0760080:CDS 30.0%
TCCAAATCAATTAATGACCA+TGG + chr5_2:16301447-16301466 None:intergenic 30.0%
GTACGTGAAATTAAATGCTT+AGG - chr5_2:16301670-16301689 Msa0760080:intron 30.0%
TCACTTTAACAAATGTACTG+TGG + chr5_2:16301876-16301895 None:intergenic 30.0%
AAAGTGAAAGTGAAAGTGAA+AGG - chr5_2:16301889-16301908 Msa0760080:intron 30.0%
AAGTGAAAGTGAAAGTGAAA+GGG - chr5_2:16301890-16301909 Msa0760080:intron 30.0%
!!! TTGGCAGAGGTTTTTTTTTA+GGG + chr5_2:16302685-16302704 None:intergenic 30.0%
!!! TTTGGCAGAGGTTTTTTTTT+AGG + chr5_2:16302686-16302705 None:intergenic 30.0%
!!! CTTCATTTTTTATTTGGCAG+AGG + chr5_2:16302698-16302717 None:intergenic 30.0%
GTTGCATAAAACAATAGTGA+AGG + chr5_2:16302944-16302963 None:intergenic 30.0%
TTGTAATGATATCCACAGAA+AGG - chr5_2:16303232-16303251 Msa0760080:intron 30.0%
!! AGTGTGGAAGTTATTTTCAT+TGG + chr5_2:16303305-16303324 None:intergenic 30.0%
!! TCGCAAATGAAATTTTAGTG+TGG + chr5_2:16303321-16303340 None:intergenic 30.0%
! GTACTCATTTTCTCACAAAT+TGG + chr5_2:16303424-16303443 None:intergenic 30.0%
TGACATTTATGACGAATAGA+TGG + chr5_2:16303499-16303518 None:intergenic 30.0%
! CAAAGATGCTTACTGTTTTA+AGG - chr5_2:16303527-16303546 Msa0760080:intron 30.0%
TAGCAAATGGTTCAAATTGT+GGG + chr5_2:16303592-16303611 None:intergenic 30.0%
ATAGCAAATGGTTCAAATTG+TGG + chr5_2:16303593-16303612 None:intergenic 30.0%
ACATGATAGAACATAGCAAA+TGG + chr5_2:16303605-16303624 None:intergenic 30.0%
CTATCATGTTAGATGTGATA+TGG - chr5_2:16303616-16303635 Msa0760080:intron 30.0%
ATTTATATCAAGCAAGTAGG+AGG - chr5_2:16303653-16303672 Msa0760080:intron 30.0%
ACATTAACAATACGTGTTTG+TGG - chr5_2:16303728-16303747 Msa0760080:intron 30.0%
!! GGACCATTAGTGTTTTTATT+AGG - chr5_2:16303752-16303771 Msa0760080:intron 30.0%
AGGCCTAATAAAAACACTAA+TGG + chr5_2:16303758-16303777 None:intergenic 30.0%
!! CACTCACAAAATTTAGTTTG+TGG - chr5_2:16303822-16303841 Msa0760080:intron 30.0%
! GATTTAGCTCATATCTAACA+AGG + chr5_2:16304015-16304034 None:intergenic 30.0%
ACTCAAATTCATGTTGAGAT+AGG - chr5_2:16304175-16304194 Msa0760080:intron 30.0%
TAATATTAAAATGTGGGTGG+TGG + chr5_2:16304205-16304224 None:intergenic 30.0%
TCCTTAATATGTGTCTTTGA+AGG + chr5_2:16304505-16304524 None:intergenic 30.0%
!!! CAATGCAAAGTTGGTTTTTT+TGG - chr5_2:16304595-16304614 Msa0760080:intron 30.0%
TTCATAAAGAGCTGAACAAA+GGG + chr5_2:16305230-16305249 None:intergenic 30.0%
TTTCATAAAGAGCTGAACAA+AGG + chr5_2:16305231-16305250 None:intergenic 30.0%
TAGATTATCTAACTCCTTAG+AGG + chr5_2:16305692-16305711 None:intergenic 30.0%
ATTCTATCACATCTCTATCA+CGG + chr5_2:16305971-16305990 None:intergenic 30.0%
CAAAGAACTTTGAATAAGGA+AGG + chr5_2:16306043-16306062 None:intergenic 30.0%
GAATATATTCTCTCTGTTGT+TGG + chr5_2:16306304-16306323 None:intergenic 30.0%
! AAACAATCAGTCTTATGAAG+AGG - chr5_2:16306544-16306563 Msa0760080:intron 30.0%
AGTCAAGAGCTTAGAAAATT+CGG + chr5_2:16306958-16306977 None:intergenic 30.0%
GCAATATTCAACATTGAACT+TGG + chr5_2:16307274-16307293 None:intergenic 30.0%
! CTTTCTTATTTAGTGGCAAA+GGG + chr5_2:16307589-16307608 None:intergenic 30.0%
! ACTTTCTTATTTAGTGGCAA+AGG + chr5_2:16307590-16307609 None:intergenic 30.0%
TGTAGAAAACAAATGACAGA+AGG + chr5_2:16307779-16307798 None:intergenic 30.0%
!! TTAATATGTGATTTGGCTCT+TGG - chr5_2:16308226-16308245 Msa0760080:intron 30.0%
TTTAAGCAATAACAAGTCCT+AGG + chr5_2:16308329-16308348 None:intergenic 30.0%
TTAAAGCAAATCACAATCAC+AGG - chr5_2:16308344-16308363 Msa0760080:intron 30.0%
TAAAGCAAATCACAATCACA+GGG - chr5_2:16308345-16308364 Msa0760080:intron 30.0%
! CAATTTGAAATCCGAACATA+TGG - chr5_2:16308515-16308534 Msa0760080:intron 30.0%
CCAATTTATTAATGGTCTCA+AGG + chr5_2:16308542-16308561 None:intergenic 30.0%
CCTTGAGACCATTAATAAAT+TGG - chr5_2:16308539-16308558 Msa0760080:intron 30.0%
AGAAATGTTTGAGGAAGATT+GGG + chr5_2:16308732-16308751 None:intergenic 30.0%
AAGAAATGTTTGAGGAAGAT+TGG + chr5_2:16308733-16308752 None:intergenic 30.0%
!! AAATTGGCTTGATTAACTGT+TGG + chr5_2:16308872-16308891 None:intergenic 30.0%
ATGTATGTTGTTATCTCTGT+AGG - chr5_2:16308943-16308962 Msa0760080:intron 30.0%
TTGTTATCTCTGTAGGATAT+TGG - chr5_2:16308950-16308969 Msa0760080:intron 30.0%
!! TAATATCTCTGAAACTTGGA+TGG - chr5_2:16309105-16309124 Msa0760080:intron 30.0%
TGTAGCTATTATCACATCTT+GGG + chr5_2:16309236-16309255 None:intergenic 30.0%
CTAATAACCCAAAAACTATG+AGG + chr5_2:16309416-16309435 None:intergenic 30.0%
GTTCTTTATTGACAATGAAG+AGG - chr5_2:16309443-16309462 Msa0760080:five_prime_UTR 30.0%
GGATATAAGAATAGAGAGAG+AGG + chr5_2:16299406-16299425 None:intergenic 35.0%
AATGTATGGAGGAAGAAGAA+TGG + chr5_2:16299427-16299446 None:intergenic 35.0%
TTGCATTGTTATGCAGTGAA+AGG + chr5_2:16299569-16299588 None:intergenic 35.0%
CTGCATAACAATGCAATCTA+AGG - chr5_2:16299573-16299592 Msa0760080:three_prime_UTR 35.0%
!!! GGTCAATTTGTTTTGACCAT+TGG - chr5_2:16299829-16299848 Msa0760080:CDS 35.0%
ATGTTCTTTAGCTGATCCAA+TGG + chr5_2:16299848-16299867 None:intergenic 35.0%
! TATATTTGTAGGTGTTACCC+AGG - chr5_2:16299950-16299969 Msa0760080:CDS 35.0%
TGTGTCGAATACAAATTCCT+GGG + chr5_2:16299970-16299989 None:intergenic 35.0%
! TGTTAATGTTCATGGGTTGT+GGG + chr5_2:16300097-16300116 None:intergenic 35.0%
AAACAGAAAAGCTTCAACTC+CGG + chr5_2:16300325-16300344 None:intergenic 35.0%
! ATTTCTATAGAGGCGTGATT+TGG + chr5_2:16300390-16300409 None:intergenic 35.0%
CACAAATTTGTGCATTGTGT+AGG - chr5_2:16300844-16300863 Msa0760080:CDS 35.0%
! TTTTGCTTTAATCGCGCTTA+TGG - chr5_2:16301308-16301327 Msa0760080:CDS 35.0%
TGGCACCTTATTAATTTAGG+TGG - chr5_2:16301360-16301379 Msa0760080:intron 35.0%
ACAGGCCACCTAAATTAATA+AGG + chr5_2:16301368-16301387 None:intergenic 35.0%
!! GTCATTAATTGATTTGGACG+TGG - chr5_2:16301449-16301468 Msa0760080:CDS 35.0%
ATTAGTACATGAACGTGACT+TGG - chr5_2:16301648-16301667 Msa0760080:intron 35.0%
AACACAATACTGTGACATAG+TGG - chr5_2:16301693-16301712 Msa0760080:intron 35.0%
GTATACTGAGGAAACCATAT+GGG + chr5_2:16301719-16301738 None:intergenic 35.0%
TGTATACTGAGGAAACCATA+TGG + chr5_2:16301720-16301739 None:intergenic 35.0%
!! ATTTTGGACATTGTTGGTGA+AGG - chr5_2:16301827-16301846 Msa0760080:intron 35.0%
! GGGATGTTTAGAATGAAGAA+AGG - chr5_2:16301916-16301935 Msa0760080:intron 35.0%
AAAGTATGGACTTACTCTCT+TGG + chr5_2:16301990-16302009 None:intergenic 35.0%
!!! TTTTTTAGGGGTCTTAAGAG+AGG + chr5_2:16302635-16302654 None:intergenic 35.0%
!!! CTTAAGAGAGGGTTTTAAGA+GGG + chr5_2:16302660-16302679 None:intergenic 35.0%
!!! TCTTAAGAGAGGGTTTTAAG+AGG + chr5_2:16302661-16302680 None:intergenic 35.0%
!! TTTTTAGGGGTCTTAAGAGA+GGG + chr5_2:16302634-16302653 None:intergenic 35.0%
!!! TTTTTTAGGGGTCTTAAGAG+AGG + chr5_2:16302635-16302654 None:intergenic 35.0%
!!! TGGCAGAGGTTTTTTTTTAG+GGG + chr5_2:16302684-16302703 None:intergenic 35.0%
TTGAGCAAGTCCTTTATTGT+AGG - chr5_2:16302864-16302883 Msa0760080:intron 35.0%
ATATTTATGACTCGTGAGGT+AGG + chr5_2:16302914-16302933 None:intergenic 35.0%
ATGCATATTTATGACTCGTG+AGG + chr5_2:16302918-16302937 None:intergenic 35.0%
TAATGTCAAGTTCATGTGCT+TGG + chr5_2:16302970-16302989 None:intergenic 35.0%
GATAGCTGTCTCAACATAAA+AGG - chr5_2:16302996-16303015 Msa0760080:intron 35.0%
GGAATGAATAATTGAGTCGA+AGG - chr5_2:16303139-16303158 Msa0760080:intron 35.0%
GAATAATTGAGTCGAAGGAT+TGG - chr5_2:16303144-16303163 Msa0760080:intron 35.0%
GGCAAACAATTCTCATCTTA+AGG + chr5_2:16303261-16303280 None:intergenic 35.0%
GATGAGAATTGTTTGCCAAA+TGG - chr5_2:16303264-16303283 Msa0760080:intron 35.0%
TTCAAATCACAATCTGAACG+TGG - chr5_2:16303701-16303720 Msa0760080:intron 35.0%
TTAACAATACGTGTTTGTGG+TGG - chr5_2:16303731-16303750 Msa0760080:intron 35.0%
AAGTAAAACGGGTAGTAGTT+AGG + chr5_2:16303778-16303797 None:intergenic 35.0%
!! TTTTGTGAGTGTCTTTGAGA+AGG + chr5_2:16303813-16303832 None:intergenic 35.0%
!!! CGATTTGGGTTTTAAAACAC+CGG + chr5_2:16303860-16303879 None:intergenic 35.0%
!!! CGGTGTTTTAAAACCCAAAT+CGG - chr5_2:16303858-16303877 Msa0760080:intron 35.0%
!! ATCAGATCAATCACCGATTT+GGG + chr5_2:16303874-16303893 None:intergenic 35.0%
ATGATTCACTAGTAGAGATC+AGG + chr5_2:16303956-16303975 None:intergenic 35.0%
GATCTCTACTAGTGAATCAT+TGG - chr5_2:16303956-16303975 Msa0760080:intron 35.0%
CTCATATCTAACAAGGACAT+GGG + chr5_2:16304008-16304027 None:intergenic 35.0%
! ATTTGGATAGGATCCTTTTG+TGG - chr5_2:16304238-16304257 Msa0760080:intron 35.0%
! TTTGGATAGGATCCTTTTGT+GGG - chr5_2:16304239-16304258 Msa0760080:intron 35.0%
AAAGAACAAATGAGCCAAGA+AGG + chr5_2:16304277-16304296 None:intergenic 35.0%
GTTCTATCCTATCATAGACT+CGG - chr5_2:16304361-16304380 Msa0760080:intron 35.0%
!!! GAGACAAAGTTTTGAAGACA+CGG + chr5_2:16304395-16304414 None:intergenic 35.0%
GCCTTCAAAGACACATATTA+AGG - chr5_2:16304501-16304520 Msa0760080:intron 35.0%
GAGATATGCTTGACATTGTT+TGG - chr5_2:16305903-16305922 Msa0760080:intron 35.0%
TAGCATATGACTAAACACCA+TGG + chr5_2:16306249-16306268 None:intergenic 35.0%
!!! TTGTTTTGGTATTGACAGCT+AGG - chr5_2:16306329-16306348 Msa0760080:intron 35.0%
! TGTTTAGAATGCAACTCTCA+AGG + chr5_2:16306529-16306548 None:intergenic 35.0%
GTGTTTAACAATGAAAAGGG+AGG - chr5_2:16306670-16306689 Msa0760080:intron 35.0%
ATGAACAAGGACTTGAAGAA+TGG - chr5_2:16306693-16306712 Msa0760080:intron 35.0%
TGAACAAGGACTTGAAGAAT+GGG - chr5_2:16306694-16306713 Msa0760080:intron 35.0%
GAATGTTGGATTGCATAAGA+AGG + chr5_2:16306761-16306780 None:intergenic 35.0%
TGGCTTCAATATCTGAATGT+TGG + chr5_2:16306775-16306794 None:intergenic 35.0%
TTCAGATATTGAAGCCATGA+AGG - chr5_2:16306778-16306797 Msa0760080:intron 35.0%
! TTACTTGGTGAAGATGTTAC+TGG - chr5_2:16306818-16306837 Msa0760080:intron 35.0%
AATGCCATCACAAATTTGTC+AGG - chr5_2:16306878-16306897 Msa0760080:intron 35.0%
CATACCTGACAAATTTGTGA+TGG + chr5_2:16306885-16306904 None:intergenic 35.0%
!! CAACGACTAAGTTGATAAGA+AGG + chr5_2:16306908-16306927 None:intergenic 35.0%
GAACAGAGAATGAAGTTGAA+CGG - chr5_2:16307194-16307213 Msa0760080:intron 35.0%
! TCATACGCAGTTACTGTTTT+TGG - chr5_2:16307374-16307393 Msa0760080:intron 35.0%
!!! TTACTGTTTTTGGTGAGCTA+TGG - chr5_2:16307384-16307403 Msa0760080:intron 35.0%
! TTTTGGTGAGCTATGGAAAT+TGG - chr5_2:16307391-16307410 Msa0760080:intron 35.0%
CTCTTTCTTTCTTCAGATAG+AGG + chr5_2:16307419-16307438 None:intergenic 35.0%
CTGAAGAAAGAAAGAGCAAA+TGG - chr5_2:16307423-16307442 Msa0760080:intron 35.0%
ACTGTCTCCTACAAACTATA+TGG - chr5_2:16307466-16307485 Msa0760080:intron 35.0%
! AGCTCAACCATATAGTTTGT+AGG + chr5_2:16307476-16307495 None:intergenic 35.0%
TACCTCAAAGATTCTACCAT+TGG + chr5_2:16307522-16307541 None:intergenic 35.0%
! CGTTTAAGATCGTTGTTGAT+TGG + chr5_2:16307722-16307741 None:intergenic 35.0%
GCTAAGTGCAACATCTTATT+TGG - chr5_2:16307844-16307863 Msa0760080:intron 35.0%
! CAATGGTGAAAACAGAGTTT+TGG - chr5_2:16307895-16307914 Msa0760080:intron 35.0%
!! GTGAAAACAGAGTTTTGGTA+TGG - chr5_2:16307900-16307919 Msa0760080:intron 35.0%
! GTATCAGAAAGACCAGTTTT+TGG + chr5_2:16308005-16308024 None:intergenic 35.0%
TTTCTGATACCGAAAGAAAG+AGG - chr5_2:16308015-16308034 Msa0760080:intron 35.0%
ATGAACCAACCTCTTTCTTT+CGG + chr5_2:16308027-16308046 None:intergenic 35.0%
AGTGCATCTCTAATAACTGT+TGG + chr5_2:16308125-16308144 None:intergenic 35.0%
TATTAGAGATGCACTTGCAA+AGG - chr5_2:16308130-16308149 Msa0760080:intron 35.0%
AGAACTATGGAACAAGTTAC+TGG - chr5_2:16308588-16308607 Msa0760080:intron 35.0%
! AACTTCATGGTCTTTTGTGA+AGG - chr5_2:16308626-16308645 Msa0760080:intron 35.0%
! ACTTCATGGTCTTTTGTGAA+GGG - chr5_2:16308627-16308646 Msa0760080:intron 35.0%
GTTTATCAGCTTCTGACATA+GGG + chr5_2:16308653-16308672 None:intergenic 35.0%
AGTTTATCAGCTTCTGACAT+AGG + chr5_2:16308654-16308673 None:intergenic 35.0%
GATGCTGCTAAAGTTCAATA+TGG - chr5_2:16308753-16308772 Msa0760080:intron 35.0%
TGCTAAAGTTCAATATGGCA+AGG - chr5_2:16308758-16308777 Msa0760080:intron 35.0%
!! AAGCCAATTTGTTGTACATG+TGG - chr5_2:16308882-16308901 Msa0760080:intron 35.0%
AATCACATTACCACTGAACT+AGG + chr5_2:16308921-16308940 None:intergenic 35.0%
CAAAAGATGAACAAAGCAGA+TGG - chr5_2:16309157-16309176 Msa0760080:intron 35.0%
GTGTAGCTATTATCACATCT+TGG + chr5_2:16309237-16309256 None:intergenic 35.0%
! TTTGCCTCCTCATAGTTTTT+GGG - chr5_2:16309406-16309425 Msa0760080:five_prime_UTR 35.0%
ATAACCCAAAAACTATGAGG+AGG + chr5_2:16309413-16309432 None:intergenic 35.0%
AGTGAAAGGTTCAATAGTGC+TGG + chr5_2:16299555-16299574 None:intergenic 40.0%
TGGTTTCAGACTCTCTTTCT+GGG - chr5_2:16299745-16299764 Msa0760080:CDS 40.0%
ATATCAAGTGGATGATGCAG+CGG + chr5_2:16299933-16299952 None:intergenic 40.0%
CTGTGTCGAATACAAATTCC+TGG + chr5_2:16299971-16299990 None:intergenic 40.0%
! GTGTTAATGTTCATGGGTTG+TGG + chr5_2:16300098-16300117 None:intergenic 40.0%
GATACACTAGCTGGTGTATA+TGG + chr5_2:16300278-16300297 None:intergenic 40.0%
AACAGAAAAGCTTCAACTCC+GGG + chr5_2:16300324-16300343 None:intergenic 40.0%
TAGTGATTCTCAATCGAAGC+CGG + chr5_2:16300597-16300616 None:intergenic 40.0%
CAAAAGAATCAGAAAGAGGG+TGG + chr5_2:16300877-16300896 None:intergenic 40.0%
AATTCATACACGGGGCAAAA+AGG + chr5_2:16300944-16300963 None:intergenic 40.0%
! CAAACGGGCTCATAAACATT+CGG + chr5_2:16302121-16302140 None:intergenic 40.0%
AAAGAGAGAAGTAGCAGCTA+TGG + chr5_2:16302806-16302825 None:intergenic 40.0%
CACATGGACTTTCTTGTATG+CGG - chr5_2:16303117-16303136 Msa0760080:intron 40.0%
ACATGGACTTTCTTGTATGC+GGG - chr5_2:16303118-16303137 Msa0760080:intron 40.0%
ATCTTAAGGAGTCCTTTCTG+TGG + chr5_2:16303247-16303266 None:intergenic 40.0%
ACCACTAGCTACAATCCATT+TGG + chr5_2:16303282-16303301 None:intergenic 40.0%
! TCATTTGCGATCAACCGTTT+TGG - chr5_2:16303331-16303350 Msa0760080:intron 40.0%
ATGTGTAGCCCTAAAGACAA+AGG - chr5_2:16303559-16303578 Msa0760080:intron 40.0%
TGTGTAGCCCTAAAGACAAA+GGG - chr5_2:16303560-16303579 Msa0760080:intron 40.0%
TGTTAGATGTGATATGGGTG+TGG - chr5_2:16303622-16303641 Msa0760080:intron 40.0%
!! AAGTAGGAGGTTGATGTGTA+AGG - chr5_2:16303666-16303685 Msa0760080:intron 40.0%
ACCATGGAGTGGAAGTAAAA+CGG + chr5_2:16303790-16303809 None:intergenic 40.0%
! GATCAGATCAATCACCGATT+TGG + chr5_2:16303875-16303894 None:intergenic 40.0%
GATTGATCTGATCAAGACAC+TGG - chr5_2:16303882-16303901 Msa0760080:intron 40.0%
TGATCAAGACACTGGATTAC+TGG - chr5_2:16303890-16303909 Msa0760080:intron 40.0%
!! TGGTTGGATTGGTGAATCAT+TGG - chr5_2:16303910-16303929 Msa0760080:intron 40.0%
GAGATCAGGTCAACAATCTT+AGG + chr5_2:16303942-16303961 None:intergenic 40.0%
GCTCATATCTAACAAGGACA+TGG + chr5_2:16304009-16304028 None:intergenic 40.0%
! TTGGATAGGATCCTTTTGTG+GGG - chr5_2:16304240-16304259 Msa0760080:intron 40.0%
GGTTCATTAGCATACCCTTA+GGG - chr5_2:16304617-16304636 Msa0760080:intron 40.0%
! AATGGTAACTTGTGCCCTAA+GGG + chr5_2:16304634-16304653 None:intergenic 40.0%
AAAGAGCTGAACAAAGGGAA+AGG + chr5_2:16305225-16305244 None:intergenic 40.0%
! TAGTCACGTGCAAGTCTTAT+TGG + chr5_2:16305624-16305643 None:intergenic 40.0%
! TAGAGGTTCACACTTTTGAG+AGG + chr5_2:16305675-16305694 None:intergenic 40.0%
! CTCAAAAGTGTGAACCTCTA+AGG - chr5_2:16305675-16305694 Msa0760080:intron 40.0%
! TTTTGGATGTATGCCTGCAT+AGG - chr5_2:16306270-16306289 Msa0760080:intron 40.0%
GTTGGACAAATAACCTATGC+AGG + chr5_2:16306286-16306305 None:intergenic 40.0%
! CATTTGAGTGTAACCCCTTT+TGG - chr5_2:16306440-16306459 Msa0760080:intron 40.0%
TCTTCAAGCAAAGATGCGTT+TGG - chr5_2:16306632-16306651 Msa0760080:intron 40.0%
ATGAAAAGGGAGGATGAACA+AGG - chr5_2:16306680-16306699 Msa0760080:intron 40.0%
AGATGTTACTGGAGGAACTA+AGG - chr5_2:16306829-16306848 Msa0760080:intron 40.0%
GATGTTACTGGAGGAACTAA+GGG - chr5_2:16306830-16306849 Msa0760080:intron 40.0%
TTGACTACGAGTGTCTAATG+TGG - chr5_2:16307104-16307123 Msa0760080:intron 40.0%
!! TTGGCATTGTTTTGCTTAGC+AGG + chr5_2:16307503-16307522 None:intergenic 40.0%
GCTAAGCAAAACAATGCCAA+TGG - chr5_2:16307503-16307522 Msa0760080:intron 40.0%
TGCCAATGGTAGAATCTTTG+AGG - chr5_2:16307517-16307536 Msa0760080:intron 40.0%
TAAGCATAGAGTCCAACTTC+TGG + chr5_2:16307679-16307698 None:intergenic 40.0%
ACAGGATGCACTTGATTCAA+TGG - chr5_2:16307878-16307897 Msa0760080:intron 40.0%
!! AACAGAGTTTTGGTATGGTG+AGG - chr5_2:16307905-16307924 Msa0760080:intron 40.0%
!! ACAGAGTTTTGGTATGGTGA+GGG - chr5_2:16307906-16307925 Msa0760080:intron 40.0%
!!! GTTTTTGGTACTTGAGGTGA+TGG + chr5_2:16307990-16308009 None:intergenic 40.0%
TCACCTCAAGTACCAAAAAC+TGG - chr5_2:16307990-16308009 Msa0760080:intron 40.0%
!!! AGACCAGTTTTTGGTACTTG+AGG + chr5_2:16307996-16308015 None:intergenic 40.0%
TGATACCGAAAGAAAGAGGT+TGG - chr5_2:16308019-16308038 Msa0760080:intron 40.0%
! AAGAAAGAGGTTGGTTCATC+AGG - chr5_2:16308028-16308047 Msa0760080:intron 40.0%
! AGAAAGAGGTTGGTTCATCA+GGG - chr5_2:16308029-16308048 Msa0760080:intron 40.0%
ATTTGGCAGCCTTGAATACT+TGG + chr5_2:16308067-16308086 None:intergenic 40.0%
TCTCTAATAACTGTTGGCAC+AGG + chr5_2:16308119-16308138 None:intergenic 40.0%
GAATGTTCTATGTTGCAGTC+TGG - chr5_2:16308414-16308433 Msa0760080:intron 40.0%
TTCTATGTTGCAGTCTGGAA+AGG - chr5_2:16308419-16308438 Msa0760080:intron 40.0%
TTGACAGCTGAATCAACTTC+TGG - chr5_2:16308471-16308490 Msa0760080:intron 40.0%
CTCGTTGAAAGAGAGAACTA+TGG - chr5_2:16308575-16308594 Msa0760080:intron 40.0%
ACAAGTTACTGGCAAATCAC+CGG - chr5_2:16308599-16308618 Msa0760080:intron 40.0%
AAAGACCATGAAGTTCGAAC+CGG + chr5_2:16308621-16308640 None:intergenic 40.0%
!! GCTGTAAAAGTGTTTCAGCA+CGG + chr5_2:16308692-16308711 None:intergenic 40.0%
GCAGCATCAAGAAATGTTTG+AGG + chr5_2:16308741-16308760 None:intergenic 40.0%
TAGAAAGGCTCGAATGTAGA+TGG + chr5_2:16308838-16308857 None:intergenic 40.0%
TGGCCACATGTACAACAAAT+TGG + chr5_2:16308888-16308907 None:intergenic 40.0%
TGTACATGTGGCCAAAAAGT+TGG - chr5_2:16308894-16308913 Msa0760080:intron 40.0%
! CTGAACTAGGACCAACTTTT+TGG + chr5_2:16308908-16308927 None:intergenic 40.0%
! AAAAGTTGGTCCTAGTTCAG+TGG - chr5_2:16308908-16308927 Msa0760080:intron 40.0%
GGATATTGGACATTCCATTC+TGG - chr5_2:16308964-16308983 Msa0760080:intron 40.0%
GGCTAAATTTCCAAGAACTC+TGG + chr5_2:16308999-16309018 None:intergenic 40.0%
!! TATCTCTGAAACTTGGATGG+TGG - chr5_2:16309108-16309127 Msa0760080:intron 40.0%
TGATAATAGCTACACCAAGC+AGG - chr5_2:16309242-16309261 Msa0760080:intron 40.0%
! GTTTGCCTCCTCATAGTTTT+TGG - chr5_2:16309405-16309424 Msa0760080:five_prime_UTR 40.0%
AAGAATAGAGAGAGAGGGGA+AGG + chr5_2:16299400-16299419 None:intergenic 45.0%
!! GGTTCAATAGTGCTGGTGAT+GGG + chr5_2:16299548-16299567 None:intergenic 45.0%
!! AGGTTCAATAGTGCTGGTGA+TGG + chr5_2:16299549-16299568 None:intergenic 45.0%
CTGGTTTCAGACTCTCTTTC+TGG - chr5_2:16299744-16299763 Msa0760080:CDS 45.0%
TTTCAGACTCTCTTTCTGGG+TGG - chr5_2:16299748-16299767 Msa0760080:CDS 45.0%
TATCAAGTGGATGATGCAGC+GGG + chr5_2:16299932-16299951 None:intergenic 45.0%
AGCTCAGAACTCAGAAGCAA+TGG - chr5_2:16300060-16300079 Msa0760080:intron 45.0%
TACACCAGCTAGTGTATCCT+TGG - chr5_2:16300280-16300299 Msa0760080:CDS 45.0%
TTTGCCAAGGATACACTAGC+TGG + chr5_2:16300287-16300306 None:intergenic 45.0%
!! GCGTGATTTGGATTTTGCCA+AGG + chr5_2:16300300-16300319 None:intergenic 45.0%
ACAGAAAAGCTTCAACTCCG+GGG + chr5_2:16300323-16300342 None:intergenic 45.0%
TCATGAGTGAGCAACAGTAG+CGG + chr5_2:16300665-16300684 None:intergenic 45.0%
TGTTGCTCACTCATGACTAG+TGG - chr5_2:16300669-16300688 Msa0760080:intron 45.0%
AAAAGAGGGAGATGGATGAG+AGG - chr5_2:16300715-16300734 Msa0760080:intron 45.0%
ATGAGACTTTGGGCTATCCA+TGG - chr5_2:16301427-16301446 Msa0760080:CDS 45.0%
AGAAGTAGCAGCTATGGCTA+TGG + chr5_2:16302800-16302819 None:intergenic 45.0%
!! GCCAAATGGATTGTAGCTAG+TGG - chr5_2:16303278-16303297 Msa0760080:intron 45.0%
GATGCCACCCTTTGTCTTTA+GGG + chr5_2:16303570-16303589 None:intergenic 45.0%
CCATGGAGTGGAAGTAAAAC+GGG + chr5_2:16303789-16303808 None:intergenic 45.0%
! AGTGTCTTTGAGAAGGACCA+TGG + chr5_2:16303806-16303825 None:intergenic 45.0%
TTTGTGGCTTCATTGTCAGC+CGG - chr5_2:16303838-16303857 Msa0760080:intron 45.0%
CAAGACACTGGATTACTGGT+TGG - chr5_2:16303894-16303913 Msa0760080:intron 45.0%
! CACTGGATTACTGGTTGGAT+TGG - chr5_2:16303899-16303918 Msa0760080:intron 45.0%
TCATTGGTCGAAGCGTAAGA+TGG - chr5_2:16303972-16303991 Msa0760080:intron 45.0%
GAAGCTTCCGAGTCTATGAT+AGG + chr5_2:16304371-16304390 None:intergenic 45.0%
GGGTTCATTAGCATACCCTT+AGG - chr5_2:16304616-16304635 Msa0760080:intron 45.0%
GACTTGCACGTGACTATATG+TGG - chr5_2:16305628-16305647 Msa0760080:intron 45.0%
GAGGAAAGCAGAACAAGTAG+AGG - chr5_2:16306563-16306582 Msa0760080:intron 45.0%
AGCAGAACAAGTAGAGGAGA+CGG - chr5_2:16306569-16306588 Msa0760080:intron 45.0%
CTTGGTGAAGATGTTACTGG+AGG - chr5_2:16306821-16306840 Msa0760080:intron 45.0%
!! TAAGGGCATCACTACAGCTT+TGG - chr5_2:16306847-16306866 Msa0760080:intron 45.0%
GAGCAAATGGCGAAGAGAAA+TGG - chr5_2:16307436-16307455 Msa0760080:intron 45.0%
AATGGCGAAGAGAAATGGAC+TGG - chr5_2:16307441-16307460 Msa0760080:intron 45.0%
TGAATGTCTGCACGAGCTTT+AGG + chr5_2:16307638-16307657 None:intergenic 45.0%
CACACTCATGTCTTTCCCTT+CGG + chr5_2:16307943-16307962 None:intergenic 45.0%
AAGGGAAAGACATGAGTGTG+CGG - chr5_2:16307943-16307962 Msa0760080:intron 45.0%
GTGTGCGGCATAGTAAAAGA+TGG - chr5_2:16307958-16307977 Msa0760080:intron 45.0%
TGCGGCATAGTAAAAGATGG+TGG - chr5_2:16307961-16307980 Msa0760080:intron 45.0%
!! AATCACCGGTTCGAACTTCA+TGG - chr5_2:16308613-16308632 Msa0760080:intron 45.0%
! TCTGGAATACGCTTCCAGAA+TGG + chr5_2:16308981-16309000 None:intergenic 45.0%
GAAGCGTATTCCAGAGTTCT+TGG - chr5_2:16308986-16309005 Msa0760080:intron 45.0%
TGTCTGGTGCATTAGTAGAG+AGG - chr5_2:16309270-16309289 Msa0760080:intron 45.0%
!! TTAAAAAAAATTATAACAAA+CGG + chr5_2:16302137-16302156 None:intergenic 5.0%
!! AAATAATAAAATTCATAAAA+TGG + chr5_2:16305013-16305032 None:intergenic 5.0%
!!! TATATATATTTTGATAAATA+AGG - chr5_2:16305436-16305455 Msa0760080:intron 5.0%
!! TTTAAATAATATCAATTAAT+TGG - chr5_2:16306145-16306164 Msa0760080:intron 5.0%
!! TTAAATAATATCAATTAATT+GGG - chr5_2:16306146-16306165 Msa0760080:intron 5.0%
!!! TATTTTATGAATTTTTATAA+TGG - chr5_2:16306474-16306493 Msa0760080:intron 5.0%
ATCAAGTGGATGATGCAGCG+GGG + chr5_2:16299931-16299950 None:intergenic 50.0%
CAAAATCCAAATCACGCCCC+CGG - chr5_2:16300303-16300322 Msa0760080:CDS 50.0%
CAGAAAAGCTTCAACTCCGG+GGG + chr5_2:16300322-16300341 None:intergenic 50.0%
!! TCAAGGTGGGCCTGTTGTTT+TGG - chr5_2:16300466-16300485 Msa0760080:CDS 50.0%
TACCACGACGGTTGTTACGA+AGG + chr5_2:16300528-16300547 None:intergenic 50.0%
AACCGTCGTGGTAGCTGTAA+CGG - chr5_2:16300535-16300554 Msa0760080:intron 50.0%
AACCGTAACTGCGACAGTTC+CGG + chr5_2:16300564-16300583 None:intergenic 50.0%
GTTACGGTTGCCAGTGTTTC+CGG - chr5_2:16300575-16300594 Msa0760080:intron 50.0%
TCAATCGAAGCCGGAAACAC+TGG + chr5_2:16300588-16300607 None:intergenic 50.0%
TGCTCACTCATGACTAGTGG+TGG - chr5_2:16300672-16300691 Msa0760080:intron 50.0%
TCACTCATGACTAGTGGTGG+TGG - chr5_2:16300675-16300694 Msa0760080:intron 50.0%
!! TGGTGGTGGTGGTGAAAAGA+GGG - chr5_2:16300701-16300720 Msa0760080:intron 50.0%
! TGGTGGTGAAAAGAGGGAGA+TGG - chr5_2:16300707-16300726 Msa0760080:intron 50.0%
GGAGATGGATGAGAGGTTGT+AGG - chr5_2:16300722-16300741 Msa0760080:intron 50.0%
CTGTGACATAGTGGCCCATA+TGG - chr5_2:16301702-16301721 Msa0760080:intron 50.0%
AGGATTGGAGCTTGACGAGT+AGG - chr5_2:16303159-16303178 Msa0760080:intron 50.0%
GGATTGGAGCTTGACGAGTA+GGG - chr5_2:16303160-16303179 Msa0760080:intron 50.0%
GTAGCCCTAAAGACAAAGGG+TGG - chr5_2:16303563-16303582 Msa0760080:intron 50.0%
GGATGCCACCCTTTGTCTTT+AGG + chr5_2:16303571-16303590 None:intergenic 50.0%
! CCCGTTTTACTTCCACTCCA+TGG - chr5_2:16303786-16303805 Msa0760080:intron 50.0%
! CTTTGAGAAGGACCATGGAG+TGG + chr5_2:16303801-16303820 None:intergenic 50.0%
GAAGCGTAAGATGGTTGACC+TGG - chr5_2:16303981-16304000 Msa0760080:intron 50.0%
TCTAACAAGGACATGGGACC+AGG + chr5_2:16304002-16304021 None:intergenic 50.0%
GAGCCAAGAAGGAGAGAAGA+GGG + chr5_2:16304266-16304285 None:intergenic 50.0%
TGAGCCAAGAAGGAGAGAAG+AGG + chr5_2:16304267-16304286 None:intergenic 50.0%
TAGGTGGAGCAAGTCTTCTG+TGG - chr5_2:16304793-16304812 Msa0760080:intron 50.0%
AGAACAAGTAGAGGAGACGG+AGG - chr5_2:16306572-16306591 Msa0760080:intron 50.0%
TCTTCCAGCACTCCAGAAGT+TGG - chr5_2:16307664-16307683 Msa0760080:intron 50.0%
!! GAGTTTTGGTATGGTGAGGG+AGG - chr5_2:16307909-16307928 Msa0760080:intron 50.0%
! GAGGTTGGTTCATCAGGGAA+AGG - chr5_2:16308034-16308053 Msa0760080:intron 50.0%
! GTTGGTTCATCAGGGAAAGG+TGG - chr5_2:16308037-16308056 Msa0760080:intron 50.0%
GGTGGTACGCCAAGTATTCA+AGG - chr5_2:16308055-16308074 Msa0760080:intron 50.0%
CAGTCTGGAAAGGCAAACCT+TGG - chr5_2:16308429-16308448 Msa0760080:intron 50.0%
CCTTGTGCAGTTCTTGTCCA+AGG + chr5_2:16308449-16308468 None:intergenic 50.0%
CCTTGGACAAGAACTGCACA+AGG - chr5_2:16308446-16308465 Msa0760080:intron 50.0%
GGTCTCAAGGGCCATATGTT+CGG + chr5_2:16308529-16308548 None:intergenic 50.0%
AACTCACTAAGTTGCTCCCC+TGG - chr5_2:16309076-16309095 Msa0760080:intron 50.0%
AGCCTTCGTAACAACCGTCG+TGG - chr5_2:16300523-16300542 Msa0760080:intron 55.0%
GACCGTTACAGCTACCACGA+CGG + chr5_2:16300540-16300559 None:intergenic 55.0%
GTGGTAGCTGTAACGGTCAC+CGG - chr5_2:16300542-16300561 Msa0760080:intron 55.0%
CACCGGAACTGTCGCAGTTA+CGG - chr5_2:16300559-16300578 Msa0760080:intron 55.0%
GCAACAGTAGCGGCGAAAGT+AGG + chr5_2:16300655-16300674 None:intergenic 55.0%
!! CTCATGACTAGTGGTGGTGG+TGG - chr5_2:16300678-16300697 Msa0760080:intron 55.0%
!! ATGACTAGTGGTGGTGGTGG+TGG - chr5_2:16300681-16300700 Msa0760080:intron 55.0%
!! GTGGTGGTGGTGGTGAAAAG+AGG - chr5_2:16300700-16300719 Msa0760080:intron 55.0%
!! GACTAGCTTGCTGCAGCAGA+GGG - chr5_2:16301938-16301957 Msa0760080:intron 55.0%
GTGAGGTAGGACTGTAGGAC+AGG + chr5_2:16302901-16302920 None:intergenic 55.0%
GACTCGTGAGGTAGGACTGT+AGG + chr5_2:16302906-16302925 None:intergenic 55.0%
AGAGAAGAGGGCCCCACAAA+AGG + chr5_2:16304254-16304273 None:intergenic 55.0%
!! GAGTCCAACTTCTGGAGTGC+TGG + chr5_2:16307671-16307690 None:intergenic 55.0%
CACCAAGCAGGAGTAGTGTC+TGG - chr5_2:16309254-16309273 Msa0760080:intron 55.0%
CACCAGACACTACTCCTGCT+TGG + chr5_2:16309259-16309278 None:intergenic 55.0%
! TCAACTCCGGGGGCGTGATT+TGG + chr5_2:16300312-16300331 None:intergenic 60.0%
!! ACTAGTGGTGGTGGTGGTGG+TGG - chr5_2:16300684-16300703 Msa0760080:intron 60.0%
!! GGACTAGCTTGCTGCAGCAG+AGG - chr5_2:16301937-16301956 Msa0760080:intron 60.0%
GGGCCCTCTTCTCTCCTTCT+TGG - chr5_2:16304260-16304279 Msa0760080:intron 60.0%
GGTATGGTGAGGGAGGAAGC+AGG - chr5_2:16307916-16307935 Msa0760080:intron 60.0%
AGGGAGGAAGCAGGACCGAA+GGG - chr5_2:16307925-16307944 Msa0760080:intron 60.0%
!! AGTGGTGGTGGTGGTGGTGG+TGG - chr5_2:16300687-16300706 Msa0760080:intron 65.0%
GAGGGAGGAAGCAGGACCGA+AGG - chr5_2:16307924-16307943 Msa0760080:intron 65.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr5_2:16300690-16300709 Msa0760080:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 16299354 16309607 16299354 ID=Msa0760080;Name=Msa0760080
chr5_2 mRNA 16299354 16309607 16299354 ID=Msa0760080-mRNA-1;Parent=Msa0760080;Name=Msa0760080-mRNA-1;_AED=0.07;_eAED=0.07;_QI=372|1|1|1|0.62|0.55|9|280|532
chr5_2 exon 16299354 16299996 16299354 ID=Msa0760080-mRNA-1:exon:7253;Parent=Msa0760080-mRNA-1
chr5_2 exon 16300182 16300529 16300182 ID=Msa0760080-mRNA-1:exon:7252;Parent=Msa0760080-mRNA-1
chr5_2 exon 16300810 16301079 16300810 ID=Msa0760080-mRNA-1:exon:7251;Parent=Msa0760080-mRNA-1
chr5_2 exon 16301261 16301335 16301261 ID=Msa0760080-mRNA-1:exon:7250;Parent=Msa0760080-mRNA-1
chr5_2 exon 16301423 16301577 16301423 ID=Msa0760080-mRNA-1:exon:7249;Parent=Msa0760080-mRNA-1
chr5_2 exon 16302062 16302454 16302062 ID=Msa0760080-mRNA-1:exon:7248;Parent=Msa0760080-mRNA-1
chr5_2 exon 16306967 16307031 16306967 ID=Msa0760080-mRNA-1:exon:7247;Parent=Msa0760080-mRNA-1
chr5_2 exon 16307052 16307112 16307052 ID=Msa0760080-mRNA-1:exon:7246;Parent=Msa0760080-mRNA-1
chr5_2 exon 16309367 16309607 16309367 ID=Msa0760080-mRNA-1:exon:7245;Parent=Msa0760080-mRNA-1
chr5_2 five_prime_UTR 16309367 16309607 16309367 ID=Msa0760080-mRNA-1:five_prime_utr;Parent=Msa0760080-mRNA-1
chr5_2 five_prime_UTR 16307052 16307112 16307052 ID=Msa0760080-mRNA-1:five_prime_utr;Parent=Msa0760080-mRNA-1
chr5_2 five_prime_UTR 16306967 16307031 16306967 ID=Msa0760080-mRNA-1:five_prime_utr;Parent=Msa0760080-mRNA-1
chr5_2 five_prime_UTR 16302450 16302454 16302450 ID=Msa0760080-mRNA-1:five_prime_utr;Parent=Msa0760080-mRNA-1
chr5_2 CDS 16302062 16302449 16302062 ID=Msa0760080-mRNA-1:cds;Parent=Msa0760080-mRNA-1
chr5_2 CDS 16301423 16301577 16301423 ID=Msa0760080-mRNA-1:cds;Parent=Msa0760080-mRNA-1
chr5_2 CDS 16301261 16301335 16301261 ID=Msa0760080-mRNA-1:cds;Parent=Msa0760080-mRNA-1
chr5_2 CDS 16300810 16301079 16300810 ID=Msa0760080-mRNA-1:cds;Parent=Msa0760080-mRNA-1
chr5_2 CDS 16300182 16300529 16300182 ID=Msa0760080-mRNA-1:cds;Parent=Msa0760080-mRNA-1
chr5_2 CDS 16299634 16299996 16299634 ID=Msa0760080-mRNA-1:cds;Parent=Msa0760080-mRNA-1
chr5_2 three_prime_UTR 16299354 16299633 16299354 ID=Msa0760080-mRNA-1:three_prime_utr;Parent=Msa0760080-mRNA-1
Gene Sequence

>Msa0760080

ATGACATATAATGGCCTTGAGAGTTGCATTCTAAACAATCAGTCTTATGAAGAGGAAAGCAGAACAAGTAGAGGAGACGGAGGCATAACCGATTCATTTGATGATGATGATTCAAGCTGTTCTTCAAGCAAAGATGCGTTTGGATCATTCTCTTCAAAGTGTTTAACAATGAAAAGGGAGGATGAACAAGGACTTGAAGAATGGGAACTTTCAGAAAGTCCTCAACATTTTTATGTCAAAGAGAAACCTTCTTATGCAATCCAACATTCAGATATTGAAGCCATGAAGGAAAATTTTTCAAAGCTTTTACTTGGTGAAGATGTTACTGGAGGAACTAAGGGCATCACTACAGCTTTGGCACTGTCTAATGCCATCACAAATTTGTCAGTTACTGTTTTTGGTGAGCTATGGAAATTGGAACCTCTATCTGAAGAAAGAAAGAGCAAATGGCGAAGAGAAATGGACTGGTTACTGTCTCCTACAAACTATATGGTTGAGCTAGTTCCTGCTAAGCAAAACAATGCCAATGGTAGAATCTTTGAGATAATGACGCCTAAAGCTCGTGCAGACATTCACATGAATCTTCCAGCACTCCAGAAGTTGGACTCTATGCTTATCGATGCACTTGATTCAATGGTGAAAACAGAGTTTTGGTATGGTGAGGGAGGAAGCAGGACCGAAGGGAAAGACATGAGTGTGCGGCATAGTAAAAGATGGTGGCTTCCATCACCTCAAGTACCAAAAACTGGTCTTTCTGATACCGAAAGAAAGAGGTTGGTTCATCAGGGAAAGGTGGTACGCCAAGTATTCAAGGCTGCCAAATCTATCAATGAAAATGTGTTGCTTGAAATGCCTGTGCCAACAGTTATTAGAGATGCACTTGCAAAGTCTGGAAAGGCAAACCTTGGACAAGAACTGCACAAGGTTTTGACAGCTGAATCAACTTCTGGAGAAGACATGATTAAATCTCTCAATTTGAAATCCGAACATATGGCCCTTGAGACCATTAATAAATTGGAAGCTGTTATATTCTCGTTGAAAGAGAGAACTATGGAACAAGTTACTGGCAAATCACCGGTTCGAACTTCATGGTCTTTTGTGAAGGGCCCTATGTCAGAAGCTGATAAACTTGAGTTATTATTGGACCGTGCTGAAACACTTTTACAGCTTCTTAAAATCAGATATCCCAATCTTCCTCAAACATTTCTTGATGCTGCTAAAGTTCAATATGGCAAGGATATTGGACATTCCATTCTGGAAGCGTATTCCAGAGTTCTTGGAAATTTAGCCTTTAGCATATTGTCTAGAATAGGAGATATATTACAAGAGGATTGTCTAAGCAGTTCTAACTCACTAAGTTGCTCCCCTGGAATAAATAATATCTCTGAAACTTGGATGGTGGATTCACATATTAAGCAATCCTTACTTCAAAAGATGAACAAAGCAGATGGACAATGTTGTGACAGTACTTCAGATTTAGAGCTCAAATCATTTGATGCTAAATCCCAAGATGTGATAATAGCTACACCAAGCAGGAGTAGTGTCTGGTGCATTAGTAGAGAGGCTTGTACGAGTGTGTCTACTCAAAATTCGCCATAG

Protein sequence

>Msa0760080

MTYNGLESCILNNQSYEEESRTSRGDGGITDSFDDDDSSCSSSKDAFGSFSSKCLTMKREDEQGLEEWELSESPQHFYVKEKPSYAIQHSDIEAMKENFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNNANGRIFEIMTPKARADIHMNLPALQKLDSMLIDALDSMVKTEFWYGEGGSRTEGKDMSVRHSKRWWLPSPQVPKTGLSDTERKRLVHQGKVVRQVFKAAKSINENVLLEMPVPTVIRDALAKSGKANLGQELHKVLTAESTSGEDMIKSLNLKSEHMALETINKLEAVIFSLKERTMEQVTGKSPVRTSWSFVKGPMSEADKLELLLDRAETLLQLLKIRYPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLGNLAFSILSRIGDILQEDCLSSSNSLSCSPGINNISETWMVDSHIKQSLLQKMNKADGQCCDSTSDLELKSFDAKSQDVIIATPSRSSVWCISREACTSVSTQNSP*