AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0408830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0408830 MtrunA17_Chr3g0099621 98.980 196 2 0 1 196 49 244 3.68e-148 410
Msa0408830 MtrunA17_Chr2g0288961 68.878 196 61 0 1 196 47 242 4.82e-106 304
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0408830 AT4G26860.1 81.026 195 37 0 1 195 48 242 3.06e-121 343
Msa0408830 AT4G26860.2 77.073 205 37 1 1 195 48 252 7.05e-118 335
Msa0408830 AT1G11930.2 76.410 195 46 0 1 195 61 255 1.37e-111 319
Msa0408830 AT1G11930.1 75.635 197 46 1 1 195 61 257 1.80e-109 314

Find 81 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGCTTGTTCATGCTATT+TGG 0.154174 3_2:-48952877 Msa0408830:three_prime_UTR
CCCTCAACCATGGCCAAATT+TGG 0.192964 3_2:+48956081 None:intergenic
CATAGAAATGGGTTTGGTTT+TGG 0.202191 3_2:+48957667 None:intergenic
AGAATTGGGTCAACAATATT+TGG 0.205222 3_2:-48953130 Msa0408830:CDS
TGCAGGCGGAGTTCCAAATT+TGG 0.235525 3_2:-48956094 Msa0408830:intron
GAGCTTTCTCAACGATTTCT+TGG 0.267769 3_2:+48957594 None:intergenic
CTCAACTCCGCAGAACTTTC+GGG 0.271171 3_2:-48954542 Msa0408830:intron
GACGCAGGTCATAGAGTCTT+TGG 0.284655 3_2:-48957629 Msa0408830:CDS
AAGCATACTCAGAAGTGTTT+TGG 0.293617 3_2:+48956650 None:intergenic
CTTCAGTCCTGCAATTTGAT+AGG 0.293960 3_2:+48954328 None:intergenic
CCTCAACTCCGCAGAACTTT+CGG 0.295923 3_2:-48954543 Msa0408830:CDS
TATCTTCAATGACTATTTGC+AGG 0.301890 3_2:-48952737 Msa0408830:three_prime_UTR
CGTGATTATTCTTAATAATC+TGG 0.302849 3_2:-48952703 Msa0408830:three_prime_UTR
AATCATGTCTTATCTACTTT+AGG 0.323770 3_2:+48953050 None:intergenic
TATGGCACAGATCTCTTAAA+TGG 0.325301 3_2:-48953023 Msa0408830:intron
AAGAAATCGTCTGAGGGTTT+TGG 0.327681 3_2:-48955747 Msa0408830:CDS
GGTAGTACTAATGTGAGAAT+TGG 0.335377 3_2:-48953145 Msa0408830:CDS
GATATTCAGTGGCACTTCAT+TGG 0.337723 3_2:-48956693 Msa0408830:CDS
GGAAGGATCAACACCAGATT+TGG 0.364216 3_2:+48954654 None:intergenic
AAGCCAGAGAATTCTAAGTT+TGG 0.370526 3_2:+48954592 None:intergenic
TCCAAATTTGGCCATGGTTG+AGG 0.375364 3_2:-48956082 Msa0408830:CDS
GATCCAAACCCGATCGAGTT+CGG 0.378479 3_2:-48957703 Msa0408830:five_prime_UTR
CCAAATTTGGCCATGGTTGA+GGG 0.385322 3_2:-48956081 Msa0408830:CDS
GACCCGAACTCGATCGGGTT+TGG 0.389360 3_2:+48957700 None:intergenic
ACGCAGGTCATAGAGTCTTT+GGG 0.391806 3_2:-48957628 Msa0408830:CDS
ATCCAAACCCGATCGAGTTC+GGG 0.394346 3_2:-48957702 Msa0408830:five_prime_UTR
TTGTTTGTTGCAGCCAAATC+TGG 0.399983 3_2:-48954667 Msa0408830:intron
CCCTCAGACGATTTCTTCCC+AGG 0.401232 3_2:+48955753 None:intergenic
TGTAGACCCTATCAAATTGC+AGG 0.402948 3_2:-48954335 Msa0408830:intron
TTTATAAATAACATCCAGTT+AGG 0.406039 3_2:+48952648 None:intergenic
AGTTTGCAAGGCACTTGAAA+TGG 0.408160 3_2:-48954307 Msa0408830:CDS
ATATTCAGTGGCACTTCATT+GGG 0.425650 3_2:-48956692 Msa0408830:CDS
GAGTTGGCGAATCATAGAAA+TGG 0.426278 3_2:+48957655 None:intergenic
GGAGCAATGTGAACTGTCAA+TGG 0.426611 3_2:-48954280 Msa0408830:CDS
TTTGGCCATGGTTGAGGGCG+TGG 0.429084 3_2:-48956076 Msa0408830:CDS
AACTCGATCGGGTTTGGATC+CGG 0.434921 3_2:+48957706 None:intergenic
TGACCGTATGGTTTCAAACC+TGG 0.441164 3_2:-48955771 Msa0408830:CDS
GCGAATCATAGAAATGGGTT+TGG 0.446886 3_2:+48957661 None:intergenic
TGTCCAAACTTAGAATTCTC+TGG 0.463779 3_2:-48954595 Msa0408830:CDS
AGATGGTCACTGTATAATAA+TGG 0.465854 3_2:+48952804 None:intergenic
TTCTCTGGCTTAATGACAAT+AGG 0.469053 3_2:-48954580 Msa0408830:CDS
AGTTGGCGAATCATAGAAAT+GGG 0.472698 3_2:+48957656 None:intergenic
GAACTGTCAATGGGCATGTC+TGG 0.485338 3_2:-48954270 Msa0408830:CDS
CATGTCTTATCTACTTTAGG+AGG 0.487980 3_2:+48953053 None:intergenic
GTAGTACTAATGTGAGAATT+GGG 0.489318 3_2:-48953144 Msa0408830:CDS
CGGAGTTCCAAATTTGGCCA+TGG 0.493079 3_2:-48956088 Msa0408830:CDS
TTCAGTCCTGCAATTTGATA+GGG 0.493507 3_2:+48954329 None:intergenic
GATAAGACATGATTACACTA+TGG 0.495303 3_2:-48953041 Msa0408830:three_prime_UTR
TGCTATTTGGAAAGAGGGAA+AGG 0.499695 3_2:-48952864 Msa0408830:three_prime_UTR
GAACTTACATTCTTCTCCAC+TGG 0.501852 3_2:+48955712 None:intergenic
GCAACGACCCGAACTCGATC+GGG 0.502938 3_2:+48957695 None:intergenic
TGCGGAGTTGAGGTATAGTC+TGG 0.506981 3_2:+48954553 None:intergenic
GGCAAACAACCTTGACCGTA+TGG 0.508466 3_2:-48955783 Msa0408830:CDS
GTTCATGCTATTTGGAAAGA+GGG 0.509415 3_2:-48952869 Msa0408830:three_prime_UTR
TGTTCATGCTATTTGGAAAG+AGG 0.518238 3_2:-48952870 Msa0408830:three_prime_UTR
TGCAACGACCCGAACTCGAT+CGG 0.532215 3_2:+48957694 None:intergenic
TTCCCAGGTTTGAAACCATA+CGG 0.534502 3_2:+48955768 None:intergenic
ATCTTCAATGACTATTTGCA+GGG 0.545360 3_2:-48952736 Msa0408830:three_prime_UTR
AATCGTTGAGAAAGCTCCTC+AGG 0.548191 3_2:-48957588 Msa0408830:intron
CCGAAAGTTCTGCGGAGTTG+AGG 0.549382 3_2:+48954543 None:intergenic
GAGCAATGTGAACTGTCAAT+GGG 0.553747 3_2:-48954279 Msa0408830:CDS
GACCGTATGGTTTCAAACCT+GGG 0.557992 3_2:-48955770 Msa0408830:CDS
ATAAATAACATCCAGTTAGG+TGG 0.569714 3_2:+48952651 None:intergenic
CGCAGGTCATAGAGTCTTTG+GGG 0.571253 3_2:-48957627 Msa0408830:CDS
CAAGGCACTTGAAATGGACG+AGG 0.572444 3_2:-48954301 Msa0408830:CDS
GGTTTGAAACCATACGGTCA+AGG 0.578649 3_2:+48955774 None:intergenic
TTGCAGGACTGAAGTTTGCA+AGG 0.579031 3_2:-48954319 Msa0408830:CDS
TATGACCTGCGTCATAGAGT+TGG 0.585309 3_2:+48957639 None:intergenic
ATTCGCCAACTCTATGACGC+AGG 0.587190 3_2:-48957644 Msa0408830:CDS
GCAAGATCAACACAATCGGA+AGG 0.593111 3_2:+48954637 None:intergenic
CCTGGGAAGAAATCGTCTGA+GGG 0.593514 3_2:-48955753 Msa0408830:CDS
GATAAACAATATTCAAACAC+TGG 0.594099 3_2:+48952756 None:intergenic
ACCTGGGAAGAAATCGTCTG+AGG 0.602661 3_2:-48955754 Msa0408830:CDS
CAGATTATTAAGAATAATCA+CGG 0.604482 3_2:+48952704 None:intergenic
ATTGTCCACGCCCTCAACCA+TGG 0.606710 3_2:+48956071 None:intergenic
GCTATTTGGAAAGAGGGAAA+GGG 0.609438 3_2:-48952863 Msa0408830:three_prime_UTR
TGAGGGCGTGGACAATCAGA+AGG 0.626680 3_2:-48956064 Msa0408830:intron
AAGTGCCACTGAATATCTTG+CGG 0.648199 3_2:+48956699 None:intergenic
AGCTTCCGCAAGATATTCAG+TGG 0.656965 3_2:-48956704 Msa0408830:CDS
TTGGTGCAAGTAAATACCAG+TGG 0.675365 3_2:-48955728 Msa0408830:CDS
ACTATTACCCGAAAGTTCTG+CGG 0.684747 3_2:+48954535 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACAAATAATTTTTAAGT+AGG - chr3_2:48953118-48953137 Msa0408830:CDS 10.0%
!!! TTTTATTATATCAATTACAA+TGG + chr3_2:48957329-48957348 None:intergenic 10.0%
!!! TTTGTCAATTTCTTAATTTT+AGG - chr3_2:48953413-48953432 Msa0408830:intron 15.0%
!!! TTGTCAATTTCTTAATTTTA+GGG - chr3_2:48953414-48953433 Msa0408830:intron 15.0%
!!! CATTTATTCTAAGTTATTTT+AGG + chr3_2:48953980-48953999 None:intergenic 15.0%
!!! ATTATTTTTTATCATCTGTT+TGG - chr3_2:48955176-48955195 Msa0408830:intron 15.0%
!! TTTAATTATATTCTGACTTA+TGG + chr3_2:48955218-48955237 None:intergenic 15.0%
!! AATAGAAAAGTAAAACAATA+TGG + chr3_2:48955513-48955532 None:intergenic 15.0%
!!! TTTACTTTTCTATTATGTAT+TGG - chr3_2:48955519-48955538 Msa0408830:intron 15.0%
!! TTTATATATTTAGACATGTA+AGG + chr3_2:48955606-48955625 None:intergenic 15.0%
!!! ATTTTTTAGAATCATTTCAT+TGG - chr3_2:48955880-48955899 Msa0408830:intron 15.0%
!! CAAATTATTAGTGAAAAAAT+CGG - chr3_2:48956372-48956391 Msa0408830:intron 15.0%
!!! TACAATCTTTTTTAGAATTA+GGG + chr3_2:48956403-48956422 None:intergenic 15.0%
!!! TTTAAAATGCAATATGAAGA+AGG + chr3_2:48952770-48952789 None:intergenic 20.0%
!! CATAACTAACTACAATTTAA+TGG + chr3_2:48952814-48952833 None:intergenic 20.0%
!!! GTCATTTTTAAAATGATTAC+CGG - chr3_2:48953295-48953314 Msa0408830:intron 20.0%
!!! AAAGTTCTAAGAATTTTGTT+TGG - chr3_2:48953574-48953593 Msa0408830:intron 20.0%
!!! AAGTTCTAAGAATTTTGTTT+GGG - chr3_2:48953575-48953594 Msa0408830:intron 20.0%
!! AACATCCTTCATATTTATAA+AGG - chr3_2:48954113-48954132 Msa0408830:intron 20.0%
!! TAACTCCTTTATAAATATGA+AGG + chr3_2:48954121-48954140 None:intergenic 20.0%
!! TATTTATAAAGGAGTTATCT+TGG - chr3_2:48954124-48954143 Msa0408830:intron 20.0%
!! TTCTTTATCATCCTTATATT+AGG - chr3_2:48954169-48954188 Msa0408830:intron 20.0%
!!! GAGAGATTTATCTTTTTTTT+AGG - chr3_2:48954938-48954957 Msa0408830:intron 20.0%
!! CTTGAAATATCTGATAATTA+TGG - chr3_2:48956153-48956172 Msa0408830:intron 20.0%
!!! CTACAATCTTTTTTAGAATT+AGG + chr3_2:48956404-48956423 None:intergenic 20.0%
!! AACAAAATTTGACAACAATT+TGG - chr3_2:48956542-48956561 Msa0408830:intron 20.0%
!! TAACTAACCATATATTCAAA+CGG - chr3_2:48956869-48956888 Msa0408830:intron 20.0%
!! AAAATCAACAACAATTTGAA+TGG + chr3_2:48956901-48956920 None:intergenic 20.0%
!! CAGATTATTAAGAATAATCA+CGG + chr3_2:48957612-48957631 None:intergenic 20.0%
!! TTTATAAATAACATCCAGTT+AGG + chr3_2:48957668-48957687 None:intergenic 20.0%
!!! TCTTTTAGCAATATTTTGAG+TGG - chr3_2:48953064-48953083 Msa0408830:three_prime_UTR 25.0%
! TATAATTTCAGGGACAAATT+TGG - chr3_2:48953454-48953473 Msa0408830:intron 25.0%
! ATAATTTCAGGGACAAATTT+GGG - chr3_2:48953455-48953474 Msa0408830:intron 25.0%
!!! AGTTCTAAGAATTTTGTTTG+GGG - chr3_2:48953576-48953595 Msa0408830:intron 25.0%
!! ACTAAACTCAAAGTATTCTA+AGG + chr3_2:48953824-48953843 None:intergenic 25.0%
!! AGAAGTTGAAATAAGCTTTT+GGG + chr3_2:48953908-48953927 None:intergenic 25.0%
!! AAGAAGTTGAAATAAGCTTT+TGG + chr3_2:48953909-48953928 None:intergenic 25.0%
! AGTATAAAAATCAGAAACAG+TGG + chr3_2:48954080-48954099 None:intergenic 25.0%
! GTTAACGTTAACCTAATATA+AGG + chr3_2:48954183-48954202 None:intergenic 25.0%
! GTTGTGCTCAATTATAATTT+AGG - chr3_2:48954360-48954379 Msa0408830:intron 25.0%
!! ATTCCTTTTAGATAACTAGT+TGG - chr3_2:48954403-48954422 Msa0408830:intron 25.0%
! TAAAGGTTTGTCAAATGATA+TGG + chr3_2:48954479-48954498 None:intergenic 25.0%
!! CTCTAAATTCTTGTTGTATT+TGG - chr3_2:48954643-48954662 Msa0408830:CDS 25.0%
! TTGTATTTGGTTATTTACGA+GGG - chr3_2:48954656-48954675 Msa0408830:CDS 25.0%
! GAGTGATGTTAGTAAAATAT+AGG - chr3_2:48954783-48954802 Msa0408830:intron 25.0%
! GATGTTAGTAAAATATAGGA+AGG - chr3_2:48954787-48954806 Msa0408830:intron 25.0%
! TTAGTAAAATATAGGAAGGA+GGG - chr3_2:48954791-48954810 Msa0408830:intron 25.0%
! GTGACCAATTATGTTATAAA+TGG - chr3_2:48954856-48954875 Msa0408830:intron 25.0%
! CACACCATTTATAACATAAT+TGG + chr3_2:48954863-48954882 None:intergenic 25.0%
!! ATATATTCTCCTCTTATTTG+AGG - chr3_2:48955027-48955046 Msa0408830:intron 25.0%
! ATTTGTCTATCAAAAAAGAG+AGG + chr3_2:48955248-48955267 None:intergenic 25.0%
!! AGTGATTATGTTAGTTTCTA+AGG - chr3_2:48955279-48955298 Msa0408830:intron 25.0%
!!! TAGTTATATTCTAAAGCATG+TGG - chr3_2:48955797-48955816 Msa0408830:intron 25.0%
! ATAATATGAACTCAAGAAAC+AGG + chr3_2:48955840-48955859 None:intergenic 25.0%
!! ATCTGATAATTATGGTCTTA+CGG - chr3_2:48956161-48956180 Msa0408830:intron 25.0%
! TTAGTTATGTCATGATAGAT+CGG - chr3_2:48956323-48956342 Msa0408830:intron 25.0%
! AAATTTGACAACAATTTGGA+TGG - chr3_2:48956546-48956565 Msa0408830:intron 25.0%
! GGTTAATTACATTAAGTAGA+TGG - chr3_2:48956586-48956605 Msa0408830:intron 25.0%
! AATTCAACAATTGTGTTATG+TGG + chr3_2:48956650-48956669 None:intergenic 25.0%
! GTTAATGACATTCAAAATTG+TGG + chr3_2:48956675-48956694 None:intergenic 25.0%
!! TATGGTTAGTTATGTTAAGT+GGG + chr3_2:48956861-48956880 None:intergenic 25.0%
!! ATATGGTTAGTTATGTTAAG+TGG + chr3_2:48956862-48956881 None:intergenic 25.0%
! GATTCATGAATCATATCTAA+AGG + chr3_2:48957014-48957033 None:intergenic 25.0%
!!! TGTTTTTTTGCATATTCTCT+TGG + chr3_2:48957210-48957229 None:intergenic 25.0%
! AATCATGTCTTATCTACTTT+AGG + chr3_2:48957266-48957285 None:intergenic 25.0%
! GATAAACAATATTCAAACAC+TGG + chr3_2:48957560-48957579 None:intergenic 25.0%
! CGTGATTATTCTTAATAATC+TGG - chr3_2:48957610-48957629 Msa0408830:CDS 25.0%
AAAAAAAGTTTGAGTACCTG+AGG + chr3_2:48952744-48952763 None:intergenic 30.0%
GTAATCATAGATATAGCTGT+CGG + chr3_2:48952891-48952910 None:intergenic 30.0%
TTATTATCTGTGTTGTGTGT+TGG - chr3_2:48952938-48952957 Msa0408830:intron 30.0%
CATGTTATCATATGAATGCT+TGG - chr3_2:48952986-48953005 Msa0408830:intron 30.0%
ATGAATGTAATCACATGAGT+TGG + chr3_2:48953273-48953292 None:intergenic 30.0%
TCGCTAGCAAATATAATTTC+AGG - chr3_2:48953443-48953462 Msa0408830:intron 30.0%
CGCTAGCAAATATAATTTCA+GGG - chr3_2:48953444-48953463 Msa0408830:intron 30.0%
TAATTTCAGGGACAAATTTG+GGG - chr3_2:48953456-48953475 Msa0408830:intron 30.0%
!!! TGTGTTATTTTTGTTCTGTC+TGG - chr3_2:48953547-48953566 Msa0408830:intron 30.0%
!! AAGAATTTTGTTTGGGGATT+TGG - chr3_2:48953582-48953601 Msa0408830:intron 30.0%
!!! GCTTTTTTTGTAGTTTCACT+AGG - chr3_2:48953779-48953798 Msa0408830:intron 30.0%
! AAACATCATAGAGTATCTCA+TGG - chr3_2:48953934-48953953 Msa0408830:intron 30.0%
!! TATGCTTTAATTTGATCTCC+AGG - chr3_2:48954338-48954357 Msa0408830:intron 30.0%
AATTATAATTGAGCACAACC+TGG + chr3_2:48954359-48954378 None:intergenic 30.0%
ACTCCAACTAGTTATCTAAA+AGG + chr3_2:48954409-48954428 None:intergenic 30.0%
GAAGTACAAGAACACATTAA+AGG + chr3_2:48954496-48954515 None:intergenic 30.0%
GTTGTATTTGGTTATTTACG+AGG - chr3_2:48954655-48954674 Msa0408830:CDS 30.0%
ATTTGCCCACATTCAAATAT+GGG + chr3_2:48954726-48954745 None:intergenic 30.0%
TATTTGCCCACATTCAAATA+TGG + chr3_2:48954727-48954746 None:intergenic 30.0%
ATATTTGAATGTGGGCAAAT+AGG - chr3_2:48954726-48954745 Msa0408830:intron 30.0%
GTTAGTAAAATATAGGAAGG+AGG - chr3_2:48954790-48954809 Msa0408830:intron 30.0%
TATAAATGGTGTGAAAAGAG+AGG - chr3_2:48954870-48954889 Msa0408830:intron 30.0%
ATAAATGGTGTGAAAAGAGA+GGG - chr3_2:48954871-48954890 Msa0408830:intron 30.0%
! CTTTTCTATTAGAGCTGTAA+AGG - chr3_2:48954906-48954925 Msa0408830:intron 30.0%
AGTCACAACATACACAATAA+GGG + chr3_2:48955082-48955101 None:intergenic 30.0%
AAGTCACAACATACACAATA+AGG + chr3_2:48955083-48955102 None:intergenic 30.0%
TTCCTGACACTAAATTAAGA+AGG + chr3_2:48955156-48955175 None:intergenic 30.0%
!! TCAGTAACTTTGGAATAAGA+GGG + chr3_2:48955389-48955408 None:intergenic 30.0%
ATTCATTGCAGATAATGACA+TGG - chr3_2:48955429-48955448 Msa0408830:intron 30.0%
TAGTTCAACAGCTATTAGAT+TGG - chr3_2:48955472-48955491 Msa0408830:intron 30.0%
! TTTTGCAAGATCAACACAAT+CGG + chr3_2:48955683-48955702 None:intergenic 30.0%
! AATGAATTGACTCCTAATAC+TGG - chr3_2:48956205-48956224 Msa0408830:intron 30.0%
TGCACAAACTACATAAAACA+AGG + chr3_2:48956429-48956448 None:intergenic 30.0%
! GTGTGTTTTACTTTCCTTAT+TGG + chr3_2:48956477-48956496 None:intergenic 30.0%
!!! CTGGGTTATTTTAACACAAT+GGG - chr3_2:48956517-48956536 Msa0408830:intron 30.0%
ATGGTTAATGCAATTCAACA+TGG - chr3_2:48956565-48956584 Msa0408830:intron 30.0%
GTGTTATGTGGATGATTAAT+GGG + chr3_2:48956638-48956657 None:intergenic 30.0%
TGTGTTATGTGGATGATTAA+TGG + chr3_2:48956639-48956658 None:intergenic 30.0%
TGTCATTAACCACAAATTTC+AGG - chr3_2:48956685-48956704 Msa0408830:CDS 30.0%
AAATCTACACCTGAAATTTG+TGG + chr3_2:48956697-48956716 None:intergenic 30.0%
GTTAACGAAGTTCAAAATTG+TGG - chr3_2:48956777-48956796 Msa0408830:intron 30.0%
GGTGGTTAATGAATATAACA+GGG + chr3_2:48956840-48956859 None:intergenic 30.0%
! GTTAATGCCGTTTGAATATA+TGG + chr3_2:48956879-48956898 None:intergenic 30.0%
TTTCTCATCTAATTGTTCAG+AGG - chr3_2:48956937-48956956 Msa0408830:intron 30.0%
GACTAACATATATAAGACCA+AGG - chr3_2:48956985-48957004 Msa0408830:intron 30.0%
ATCATATCTAAAGGTTTCCT+TGG + chr3_2:48957005-48957024 None:intergenic 30.0%
GTAGTACTAATGTGAGAATT+GGG - chr3_2:48957169-48957188 Msa0408830:intron 30.0%
AGAATTGGGTCAACAATATT+TGG - chr3_2:48957183-48957202 Msa0408830:intron 30.0%
GATAAGACATGATTACACTA+TGG - chr3_2:48957272-48957291 Msa0408830:intron 30.0%
AGATGGTCACTGTATAATAA+TGG + chr3_2:48957512-48957531 None:intergenic 30.0%
! GTTAAGTTTCTTTTTGCAGA+TGG + chr3_2:48957529-48957548 None:intergenic 30.0%
TATCTTCAATGACTATTTGC+AGG - chr3_2:48957576-48957595 Msa0408830:intron 30.0%
ATCTTCAATGACTATTTGCA+GGG - chr3_2:48957577-48957596 Msa0408830:intron 30.0%
!!! TTATTTTTTTGCCACCTAAC+TGG - chr3_2:48957651-48957670 Msa0408830:exon 30.0%
ATAAATAACATCCAGTTAGG+TGG + chr3_2:48957665-48957684 None:intergenic 30.0%
!! CATAGAAATGGGTTTGGTTT+TGG + chr3_2:48952649-48952668 None:intergenic 35.0%
AGTTGGCGAATCATAGAAAT+GGG + chr3_2:48952660-48952679 None:intergenic 35.0%
ACGAAAAACTTGTATGCATG+AGG - chr3_2:48953166-48953185 Msa0408830:intron 35.0%
ATATTCAGTGGCACTTCATT+GGG - chr3_2:48953621-48953640 Msa0408830:intron 35.0%
!!! AAGCATACTCAGAAGTGTTT+TGG + chr3_2:48953666-48953685 None:intergenic 35.0%
!!! GGGCATGTCATTGTTTTTAT+AGG + chr3_2:48953888-48953907 None:intergenic 35.0%
! CATGGATAAGTGCTTGATTT+TGG - chr3_2:48953952-48953971 Msa0408830:intron 35.0%
ACTAAGCTGATTATCTAGAC+AGG - chr3_2:48954004-48954023 Msa0408830:intron 35.0%
!! TTATCTAGACAGGTTCTAAG+TGG - chr3_2:48954014-48954033 Msa0408830:intron 35.0%
TAAAGGAGTTATCTTGGTTG+AGG - chr3_2:48954130-48954149 Msa0408830:intron 35.0%
TTATCTTGGTTGAGGTTGTT+TGG - chr3_2:48954138-48954157 Msa0408830:intron 35.0%
CTAAGAGCTACTGGTAATAT+TGG + chr3_2:48954288-48954307 None:intergenic 35.0%
! TTCATATCTCTAAGAGCTAC+TGG + chr3_2:48954297-48954316 None:intergenic 35.0%
AGCTTATCGAAATCACAGTT+TGG + chr3_2:48954433-48954452 None:intergenic 35.0%
TTGTCAAATGATATGGCAAG+TGG + chr3_2:48954472-48954491 None:intergenic 35.0%
TGTTCTTGTACTTCTGTAAC+TGG - chr3_2:48954502-48954521 Msa0408830:intron 35.0%
AATATGGGATCCTAACAGTA+TGG + chr3_2:48954711-48954730 None:intergenic 35.0%
TAGGATCCCATATTTGAATG+TGG - chr3_2:48954717-48954736 Msa0408830:intron 35.0%
AGGATCCCATATTTGAATGT+GGG - chr3_2:48954718-48954737 Msa0408830:intron 35.0%
GGCATGCAAGAATTAACTAA+CGG + chr3_2:48954752-48954771 None:intergenic 35.0%
ATTCTTGCATGCCTATTATG+TGG - chr3_2:48954759-48954778 Msa0408830:intron 35.0%
TTCTTGCATGCCTATTATGT+GGG - chr3_2:48954760-48954779 Msa0408830:intron 35.0%
AAAATATAGGAAGGAGGGAA+AGG - chr3_2:48954796-48954815 Msa0408830:intron 35.0%
TCTATTAGAGCTGTAAAGGT+TGG - chr3_2:48954910-48954929 Msa0408830:intron 35.0%
CTATTAGAGCTGTAAAGGTT+GGG - chr3_2:48954911-48954930 Msa0408830:intron 35.0%
!! TTTTTAGGAGCAATAGCTCT+TGG - chr3_2:48954953-48954972 Msa0408830:intron 35.0%
!! TTTTAGGAGCAATAGCTCTT+GGG - chr3_2:48954954-48954973 Msa0408830:intron 35.0%
TGATAGGAACCTCAAATAAG+AGG + chr3_2:48955039-48955058 None:intergenic 35.0%
TGAGGTTCCTATCACATATT+CGG - chr3_2:48955045-48955064 Msa0408830:intron 35.0%
AGATATGCCGAATATGTGAT+AGG + chr3_2:48955055-48955074 None:intergenic 35.0%
! TCTGCATCACTGTAATTTTG+TGG - chr3_2:48955110-48955129 Msa0408830:intron 35.0%
GACACTAAATTAAGAAGGCA+CGG + chr3_2:48955151-48955170 None:intergenic 35.0%
TGCCTTCTTAATTTAGTGTC+AGG - chr3_2:48955151-48955170 Msa0408830:intron 35.0%
!! TTGAAGGAGTTTTAACCAAG+AGG + chr3_2:48955318-48955337 None:intergenic 35.0%
!! CAGTAACTTTGGAATAAGAG+GGG + chr3_2:48955388-48955407 None:intergenic 35.0%
!! CTCAGTAACTTTGGAATAAG+AGG + chr3_2:48955390-48955409 None:intergenic 35.0%
CTTATTCCAAAGTTACTGAG+TGG - chr3_2:48955390-48955409 Msa0408830:intron 35.0%
TAAAAGCCACTCAGTAACTT+TGG + chr3_2:48955399-48955418 None:intergenic 35.0%
GTGCATTGTTTGTCAGAATA+CGG - chr3_2:48955570-48955589 Msa0408830:intron 35.0%
TGTCCAAACTTAGAATTCTC+TGG - chr3_2:48955718-48955737 Msa0408830:intron 35.0%
AAGCCAGAGAATTCTAAGTT+TGG + chr3_2:48955724-48955743 None:intergenic 35.0%
! TTCTCTGGCTTAATGACAAT+AGG - chr3_2:48955733-48955752 Msa0408830:CDS 35.0%
!! GAATCATTTCATTGGTTTCG+TGG - chr3_2:48955888-48955907 Msa0408830:intron 35.0%
TTCAGTCCTGCAATTTGATA+GGG + chr3_2:48955987-48956006 None:intergenic 35.0%
!! GGATGCTTTTTACCTCATAA+GGG - chr3_2:48956182-48956201 Msa0408830:intron 35.0%
AGTCAATTCATTCCCTTATG+AGG + chr3_2:48956197-48956216 None:intergenic 35.0%
AAAAATCCCACTCCAGTATT+AGG + chr3_2:48956220-48956239 None:intergenic 35.0%
!!! AATACTGGAGTGGGATTTTT+TGG - chr3_2:48956220-48956239 Msa0408830:intron 35.0%
! CTGACACATTCTCTTTTCTA+AGG - chr3_2:48956292-48956311 Msa0408830:intron 35.0%
TCCTTATTGGCACTTCTAAT+GGG + chr3_2:48956464-48956483 None:intergenic 35.0%
TTCCTTATTGGCACTTCTAA+TGG + chr3_2:48956465-48956484 None:intergenic 35.0%
AAGGAAAGTAAAACACACAG+AGG - chr3_2:48956479-48956498 Msa0408830:intron 35.0%
!!! GCTGGGTTATTTTAACACAA+TGG - chr3_2:48956516-48956535 Msa0408830:intron 35.0%
GATTGATCACTTGACAATCA+TGG - chr3_2:48956755-48956774 Msa0408830:intron 35.0%
TTGTGGTTAATTACGTTCAG+TGG - chr3_2:48956794-48956813 Msa0408830:intron 35.0%
GGGTGGTTAATGAATATAAC+AGG + chr3_2:48956841-48956860 None:intergenic 35.0%
TCATCTAATTGTTCAGAGGT+AGG - chr3_2:48956941-48956960 Msa0408830:intron 35.0%
GGTAGTACTAATGTGAGAAT+TGG - chr3_2:48957168-48957187 Msa0408830:intron 35.0%
CATGTCTTATCTACTTTAGG+AGG + chr3_2:48957263-48957282 None:intergenic 35.0%
TATGGCACAGATCTCTTAAA+TGG - chr3_2:48957290-48957309 Msa0408830:intron 35.0%
TGTACTAAGAACAAACTGCA+TGG - chr3_2:48957379-48957398 Msa0408830:intron 35.0%
GAATGCTTGTTCATGCTATT+TGG - chr3_2:48957436-48957455 Msa0408830:intron 35.0%
! TGTTCATGCTATTTGGAAAG+AGG - chr3_2:48957443-48957462 Msa0408830:intron 35.0%
! GTTCATGCTATTTGGAAAGA+GGG - chr3_2:48957444-48957463 Msa0408830:intron 35.0%
! GCGAATCATAGAAATGGGTT+TGG + chr3_2:48952655-48952674 None:intergenic 40.0%
GAGTTGGCGAATCATAGAAA+TGG + chr3_2:48952661-48952680 None:intergenic 40.0%
GAGCTTTCTCAACGATTTCT+TGG + chr3_2:48952722-48952741 None:intergenic 40.0%
TATGAAACACAGACACTCCT+CGG - chr3_2:48952830-48952849 Msa0408830:three_prime_UTR 40.0%
GCACGAACATTTCTGATTGA+AGG - chr3_2:48953205-48953224 Msa0408830:intron 40.0%
! TTTCTGATTGAAGGTGTGTC+TGG - chr3_2:48953214-48953233 Msa0408830:intron 40.0%
GTCACTAATGGAAGTGATGA+TGG - chr3_2:48953353-48953372 Msa0408830:intron 40.0%
! AAGTGCCACTGAATATCTTG+CGG + chr3_2:48953617-48953636 None:intergenic 40.0%
GATATTCAGTGGCACTTCAT+TGG - chr3_2:48953620-48953639 Msa0408830:intron 40.0%
TCCCAAGAACAAGTTTATCC+CGG + chr3_2:48954040-48954059 None:intergenic 40.0%
CCTGCATAATAAAGCACACA+AGG + chr3_2:48954205-48954224 None:intergenic 40.0%
! CCTTGTGTGCTTTATTATGC+AGG - chr3_2:48954202-48954221 Msa0408830:intron 40.0%
! TGTGTGCTTTATTATGCAGG+CGG - chr3_2:48954205-48954224 Msa0408830:intron 40.0%
! TTCCCAGGTTTGAAACCATA+CGG + chr3_2:48954548-48954567 None:intergenic 40.0%
! AAGAAATCGTCTGAGGGTTT+TGG - chr3_2:48954566-48954585 Msa0408830:CDS 40.0%
TTGGTGCAAGTAAATACCAG+TGG - chr3_2:48954585-48954604 Msa0408830:CDS 40.0%
GAACTTACATTCTTCTCCAC+TGG + chr3_2:48954604-48954623 None:intergenic 40.0%
TCTTGCATGCCTATTATGTG+GGG - chr3_2:48954761-48954780 Msa0408830:intron 40.0%
AACATCACTCCCCACATAAT+AGG + chr3_2:48954773-48954792 None:intergenic 40.0%
AAACTCCTTCAACATTGCTC+AGG - chr3_2:48955326-48955345 Msa0408830:intron 40.0%
!! AACTTTGGAATAAGAGGGGA+AGG + chr3_2:48955384-48955403 None:intergenic 40.0%
! TTGTTTGTTGCAGCCAAATC+TGG - chr3_2:48955646-48955665 Msa0408830:intron 40.0%
ACTATTACCCGAAAGTTCTG+CGG + chr3_2:48955781-48955800 None:intergenic 40.0%
TGTAGACCCTATCAAATTGC+AGG - chr3_2:48955978-48955997 Msa0408830:intron 40.0%
CTTCAGTCCTGCAATTTGAT+AGG + chr3_2:48955988-48956007 None:intergenic 40.0%
! AGTTTGCAAGGCACTTGAAA+TGG - chr3_2:48956006-48956025 Msa0408830:intron 40.0%
GAGCAATGTGAACTGTCAAT+GGG - chr3_2:48956034-48956053 Msa0408830:intron 40.0%
!! CGGATGCTTTTTACCTCATA+AGG - chr3_2:48956181-48956200 Msa0408830:intron 40.0%
! ATTGACTCCTAATACTGGAG+TGG - chr3_2:48956210-48956229 Msa0408830:intron 40.0%
TTGACTCCTAATACTGGAGT+GGG - chr3_2:48956211-48956230 Msa0408830:intron 40.0%
GTTATGTCATGATAGATCGG+TGG - chr3_2:48956326-48956345 Msa0408830:intron 40.0%
CCTTATTGGCACTTCTAATG+GGG + chr3_2:48956463-48956482 None:intergenic 40.0%
CACACAGAGGATAGTCTAAT+AGG - chr3_2:48956492-48956511 Msa0408830:intron 40.0%
AGGATAGTCTAATAGGAGCT+GGG - chr3_2:48956499-48956518 Msa0408830:intron 40.0%
! GGTTAGTTATGTTAAGTGGG+TGG + chr3_2:48956858-48956877 None:intergenic 40.0%
TCAGAGGTAGGAGATGATTA+AGG - chr3_2:48956953-48956972 Msa0408830:intron 40.0%
! CTTGCCTTTTCAGATCGAAT+CGG - chr3_2:48957146-48957165 Msa0408830:intron 40.0%
! TTGCCTTTTCAGATCGAATC+GGG - chr3_2:48957147-48957166 Msa0408830:intron 40.0%
! TGCTATTTGGAAAGAGGGAA+AGG - chr3_2:48957449-48957468 Msa0408830:intron 40.0%
GCTATTTGGAAAGAGGGAAA+GGG - chr3_2:48957450-48957469 Msa0408830:intron 40.0%
TATGACCTGCGTCATAGAGT+TGG + chr3_2:48952677-48952696 None:intergenic 45.0%
ACGCAGGTCATAGAGTCTTT+GGG - chr3_2:48952685-48952704 Msa0408830:three_prime_UTR 45.0%
AATCGTTGAGAAAGCTCCTC+AGG - chr3_2:48952725-48952744 Msa0408830:three_prime_UTR 45.0%
!! ACATGAGTTGGTGTTGTGTC+AGG + chr3_2:48953261-48953280 None:intergenic 45.0%
CAACGTGTCAGTGTCAAGTT+CGG - chr3_2:48953321-48953340 Msa0408830:intron 45.0%
AGCTTCCGCAAGATATTCAG+TGG - chr3_2:48953609-48953628 Msa0408830:intron 45.0%
! GCCGGGATAAACTTGTTCTT+GGG - chr3_2:48954036-48954055 Msa0408830:intron 45.0%
TCCAAATTTGGCCATGGTTG+AGG - chr3_2:48954231-48954250 Msa0408830:intron 45.0%
CCAAATTTGGCCATGGTTGA+GGG - chr3_2:48954232-48954251 Msa0408830:intron 45.0%
CTTGTACTTCTGTAACTGGC+AGG - chr3_2:48954506-48954525 Msa0408830:intron 45.0%
! GGTTTGAAACCATACGGTCA+AGG + chr3_2:48954542-48954561 None:intergenic 45.0%
TGACCGTATGGTTTCAAACC+TGG - chr3_2:48954542-48954561 Msa0408830:intron 45.0%
GACCGTATGGTTTCAAACCT+GGG - chr3_2:48954543-48954562 Msa0408830:CDS 45.0%
AAAGGATTATGACCTGGCAG+AGG - chr3_2:48954814-48954833 Msa0408830:intron 45.0%
AGCAATAGCTCTTGGGTTAC+AGG - chr3_2:48954961-48954980 Msa0408830:intron 45.0%
GCAATAGCTCTTGGGTTACA+GGG - chr3_2:48954962-48954981 Msa0408830:intron 45.0%
!! GGAGTTTTAACCAAGAGGTC+TGG + chr3_2:48955313-48955332 None:intergenic 45.0%
GATGACCTGAGCAATGTTGA+AGG + chr3_2:48955334-48955353 None:intergenic 45.0%
GGAAGGATCAACACCAGATT+TGG + chr3_2:48955662-48955681 None:intergenic 45.0%
GCAAGATCAACACAATCGGA+AGG + chr3_2:48955679-48955698 None:intergenic 45.0%
GACATTAGAGTTTAGCGTCG+AGG + chr3_2:48955928-48955947 None:intergenic 45.0%
TTGCAGGACTGAAGTTTGCA+AGG - chr3_2:48955994-48956013 Msa0408830:intron 45.0%
GGAGCAATGTGAACTGTCAA+TGG - chr3_2:48956033-48956052 Msa0408830:intron 45.0%
!!! GTCTGGCGATTTTGAGTTAG+CGG - chr3_2:48956060-48956079 Msa0408830:intron 45.0%
!!! GCGATTTTGAGTTAGCGGTA+TGG - chr3_2:48956065-48956084 Msa0408830:CDS 45.0%
!! CCCCATTAGAAGTGCCAATA+AGG - chr3_2:48956460-48956479 Msa0408830:intron 45.0%
GAGGATAGTCTAATAGGAGC+TGG - chr3_2:48956498-48956517 Msa0408830:intron 45.0%
! CTACCCGATTCGATCTGAAA+AGG + chr3_2:48957153-48957172 None:intergenic 45.0%
AACTCGATCGGGTTTGGATC+CGG + chr3_2:48952610-48952629 None:intergenic 50.0%
GATCCAAACCCGATCGAGTT+CGG - chr3_2:48952610-48952629 Msa0408830:three_prime_UTR 50.0%
ATCCAAACCCGATCGAGTTC+GGG - chr3_2:48952611-48952630 Msa0408830:three_prime_UTR 50.0%
ATTCGCCAACTCTATGACGC+AGG - chr3_2:48952669-48952688 Msa0408830:three_prime_UTR 50.0%
GACGCAGGTCATAGAGTCTT+TGG - chr3_2:48952684-48952703 Msa0408830:three_prime_UTR 50.0%
CGCAGGTCATAGAGTCTTTG+GGG - chr3_2:48952686-48952705 Msa0408830:three_prime_UTR 50.0%
ACACAGACACTCCTCGGATT+AGG - chr3_2:48952836-48952855 Msa0408830:three_prime_UTR 50.0%
GAAGCAGAGAGACACAGACA+CGG + chr3_2:48952967-48952986 None:intergenic 50.0%
TGACACTGACACGTTGACAC+CGG + chr3_2:48953317-48953336 None:intergenic 50.0%
CGGTGTGCGTATGTCACTAA+TGG - chr3_2:48953341-48953360 Msa0408830:intron 50.0%
!! CTAGACAGGTTCTAAGTGGC+CGG - chr3_2:48954018-48954037 Msa0408830:intron 50.0%
!! TAGACAGGTTCTAAGTGGCC+GGG - chr3_2:48954019-48954038 Msa0408830:intron 50.0%
! GGCCGGGATAAACTTGTTCT+TGG - chr3_2:48954035-48954054 Msa0408830:intron 50.0%
TGCAGGCGGAGTTCCAAATT+TGG - chr3_2:48954219-48954238 Msa0408830:intron 50.0%
CGGAGTTCCAAATTTGGCCA+TGG - chr3_2:48954225-48954244 Msa0408830:intron 50.0%
CCCTCAACCATGGCCAAATT+TGG + chr3_2:48954235-48954254 None:intergenic 50.0%
GTACTTCTGTAACTGGCAGG+TGG - chr3_2:48954509-48954528 Msa0408830:intron 50.0%
GGCAAACAACCTTGACCGTA+TGG - chr3_2:48954530-48954549 Msa0408830:intron 50.0%
ACCTGGGAAGAAATCGTCTG+AGG - chr3_2:48954559-48954578 Msa0408830:CDS 50.0%
CCTGGGAAGAAATCGTCTGA+GGG - chr3_2:48954560-48954579 Msa0408830:CDS 50.0%
ACGAGGGTTTCCAACATCCT+CGG - chr3_2:48954672-48954691 Msa0408830:intron 50.0%
CGAAGCTGAGCCATACTGTT+AGG - chr3_2:48954698-48954717 Msa0408830:intron 50.0%
GGAGGGAAAGGATTATGACC+TGG - chr3_2:48954808-48954827 Msa0408830:intron 50.0%
TTATGACCTGGCAGAGGCTA+AGG - chr3_2:48954820-48954839 Msa0408830:intron 50.0%
TATGACCTGGCAGAGGCTAA+GGG - chr3_2:48954821-48954840 Msa0408830:intron 50.0%
GGTTAGAACTCCAGACCTCT+TGG - chr3_2:48955300-48955319 Msa0408830:intron 50.0%
TGATTCCCAAGTAGGCAGCT+CGG + chr3_2:48955359-48955378 None:intergenic 50.0%
! GGAAGGTGTGATTCCCAAGT+AGG + chr3_2:48955367-48955386 None:intergenic 50.0%
TGCGGAGTTGAGGTATAGTC+TGG + chr3_2:48955763-48955782 None:intergenic 50.0%
CCTCAACTCCGCAGAACTTT+CGG - chr3_2:48955770-48955789 Msa0408830:CDS 50.0%
CTCAACTCCGCAGAACTTTC+GGG - chr3_2:48955771-48955790 Msa0408830:CDS 50.0%
! CAAGGCACTTGAAATGGACG+AGG - chr3_2:48956012-48956031 Msa0408830:intron 50.0%
GAACTGTCAATGGGCATGTC+TGG - chr3_2:48956043-48956062 Msa0408830:intron 50.0%
TGCAACGACCCGAACTCGAT+CGG + chr3_2:48952622-48952641 None:intergenic 55.0%
! TCCTCGGATTAGGCGTGTCA+CGG - chr3_2:48952846-48952865 Msa0408830:three_prime_UTR 55.0%
GATTAGGCGTGTCACGGTGT+CGG - chr3_2:48952852-48952871 Msa0408830:three_prime_UTR 55.0%
ATTGTCCACGCCCTCAACCA+TGG + chr3_2:48954245-48954264 None:intergenic 55.0%
! TGAGGGCGTGGACAATCAGA+AGG - chr3_2:48954249-48954268 Msa0408830:intron 55.0%
CCCTCAGACGATTTCTTCCC+AGG + chr3_2:48954563-48954582 None:intergenic 55.0%
CGAGGGTTTCCAACATCCTC+GGG - chr3_2:48954673-48954692 Msa0408830:intron 55.0%
ATCCACCGAGCTGCCTACTT+GGG - chr3_2:48955351-48955370 Msa0408830:intron 55.0%
CCGAAAGTTCTGCGGAGTTG+AGG + chr3_2:48955773-48955792 None:intergenic 55.0%
GACCCGAACTCGATCGGGTT+TGG + chr3_2:48952616-48952635 None:intergenic 60.0%
GCAACGACCCGAACTCGATC+GGG + chr3_2:48952621-48952640 None:intergenic 60.0%
ACCGTGACACGCCTAATCCG+AGG + chr3_2:48952850-48952869 None:intergenic 60.0%
TTTGGCCATGGTTGAGGGCG+TGG - chr3_2:48954237-48954256 Msa0408830:intron 60.0%
CATCCACCGAGCTGCCTACT+TGG - chr3_2:48955350-48955369 Msa0408830:intron 60.0%
TTCCCAAGTAGGCAGCTCGG+TGG + chr3_2:48955356-48955375 None:intergenic 60.0%
AGCTTCGCGCCCGAGGATGT+TGG + chr3_2:48954685-48954704 None:intergenic 65.0%
GTGCACCCTTAGCCTCTGCC+AGG + chr3_2:48954829-48954848 None:intergenic 65.0%
ATGGCTCAGCTTCGCGCCCG+AGG + chr3_2:48954692-48954711 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 48952597 48957738 48952597 ID=Msa0408830;Name=Msa0408830
chr3_2 mRNA 48952597 48957738 48952597 ID=Msa0408830-mRNA-1;Parent=Msa0408830;Name=Msa0408830-mRNA-1;_AED=0.12;_eAED=0.12;_QI=69|1|1|1|0.85|0.75|8|380|196
chr3_2 exon 48952597 48952898 48952597 ID=Msa0408830-mRNA-1:exon:9554;Parent=Msa0408830-mRNA-1
chr3_2 exon 48953024 48953176 48953024 ID=Msa0408830-mRNA-1:exon:9553;Parent=Msa0408830-mRNA-1
chr3_2 exon 48954254 48954352 48954254 ID=Msa0408830-mRNA-1:exon:9552;Parent=Msa0408830-mRNA-1
chr3_2 exon 48954543 48954676 48954543 ID=Msa0408830-mRNA-1:exon:9551;Parent=Msa0408830-mRNA-1
chr3_2 exon 48955720 48955807 48955720 ID=Msa0408830-mRNA-1:exon:9550;Parent=Msa0408830-mRNA-1
chr3_2 exon 48956065 48956111 48956065 ID=Msa0408830-mRNA-1:exon:9549;Parent=Msa0408830-mRNA-1
chr3_2 exon 48956658 48956724 48956658 ID=Msa0408830-mRNA-1:exon:9548;Parent=Msa0408830-mRNA-1
chr3_2 exon 48957589 48957738 48957589 ID=Msa0408830-mRNA-1:exon:9547;Parent=Msa0408830-mRNA-1
chr3_2 five_prime_UTR 48957670 48957738 48957670 ID=Msa0408830-mRNA-1:five_prime_utr;Parent=Msa0408830-mRNA-1
chr3_2 CDS 48957589 48957669 48957589 ID=Msa0408830-mRNA-1:cds;Parent=Msa0408830-mRNA-1
chr3_2 CDS 48956658 48956724 48956658 ID=Msa0408830-mRNA-1:cds;Parent=Msa0408830-mRNA-1
chr3_2 CDS 48956065 48956111 48956065 ID=Msa0408830-mRNA-1:cds;Parent=Msa0408830-mRNA-1
chr3_2 CDS 48955720 48955807 48955720 ID=Msa0408830-mRNA-1:cds;Parent=Msa0408830-mRNA-1
chr3_2 CDS 48954543 48954676 48954543 ID=Msa0408830-mRNA-1:cds;Parent=Msa0408830-mRNA-1
chr3_2 CDS 48954254 48954352 48954254 ID=Msa0408830-mRNA-1:cds;Parent=Msa0408830-mRNA-1
chr3_2 CDS 48953102 48953176 48953102 ID=Msa0408830-mRNA-1:cds;Parent=Msa0408830-mRNA-1
chr3_2 three_prime_UTR 48953024 48953101 48953024 ID=Msa0408830-mRNA-1:three_prime_utr;Parent=Msa0408830-mRNA-1
chr3_2 three_prime_UTR 48952597 48952898 48952597 ID=Msa0408830-mRNA-1:three_prime_utr;Parent=Msa0408830-mRNA-1
Gene Sequence

>Msa0408830

ATGATTCGCCAACTCTATGACGCAGGTCATAGAGTCTTTGGGGAAAACTATGTCCAAGAAATCGTTGAGAAAGCTCCTCAGCTTCCGCAAGATATTCAGTGGCACTTCATTGGGCATTTGCAGAGCAATAAAGCCAAAACACTTCTGAGCGGAGTTCCAAATTTGGCCATGGTTGAGGGCGTGGACAATCAGAAGGTGGCAAACAACCTTGACCGTATGGTTTCAAACCTGGGAAGAAATCGTCTGAGGGTTTTGGTGCAAGTAAATACCAGTGGAGAAGAATCCAAATCTGGTGTTGATCCTTCCGATTGTGTTGATCTTGCAAAACATGTTAAATTGAGCTGTCCAAACTTAGAATTCTCTGGCTTAATGACAATAGGAATGCCAGACTATACCTCAACTCCGCAGAACTTTCGGACCCTATCAAATTGCAGGACTGAAGTTTGCAAGGCACTTGAAATGGACGAGGAGCAATGTGAACTGTCAATGGGCATGTCTGGCGATTTTGAGTTAGCGATCGAATCGGGTAGTACTAATGTGAGAATTGGGTCAACAATATTTGGTCCAAGAGAATATGCAAAAAAACAATGA

Protein sequence

>Msa0408830

MIRQLYDAGHRVFGENYVQEIVEKAPQLPQDIQWHFIGHLQSNKAKTLLSGVPNLAMVEGVDNQKVANNLDRMVSNLGRNRLRVLVQVNTSGEESKSGVDPSDCVDLAKHVKLSCPNLEFSGLMTIGMPDYTSTPQNFRTLSNCRTEVCKALEMDEEQCELSMGMSGDFELAIESGSTNVRIGSTIFGPREYAKKQ*