Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0411270 | XP_003600351.1 | 88.312 | 77 | 9 | 0 | 7 | 83 | 446 | 522 | 4.13e-37 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0411270 | sp|Q8VZK9|CSLE1_ARATH | 65.217 | 69 | 24 | 0 | 7 | 75 | 443 | 511 | 2.50e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0411270 | G7IV14 | 88.312 | 77 | 9 | 0 | 7 | 83 | 446 | 522 | 1.97e-37 | 144 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005160 | Msa0411270 | 0.813311 | 2.729702e-51 | -8.615850e-47 |
| Msa0012460 | Msa0411270 | 0.800986 | 1.114056e-48 | -8.615850e-47 |
| Msa0030740 | Msa0411270 | 0.809644 | 1.708736e-50 | -8.615850e-47 |
| Msa0033930 | Msa0411270 | 0.805137 | 1.543450e-49 | -8.615850e-47 |
| Msa0034340 | Msa0411270 | 0.816952 | 4.240991e-52 | -8.615850e-47 |
| Msa0035090 | Msa0411270 | 0.822802 | 1.949568e-53 | -8.615850e-47 |
| Msa0039200 | Msa0411270 | 0.823013 | 1.740778e-53 | -8.615850e-47 |
| Msa0044380 | Msa0411270 | 0.807933 | 3.967233e-50 | -8.615850e-47 |
| Msa0046360 | Msa0411270 | 0.813623 | 2.330987e-51 | -8.615850e-47 |
| Msa0046670 | Msa0411270 | 0.810952 | 8.924187e-51 | -8.615850e-47 |
| Msa0046700 | Msa0411270 | 0.810131 | 1.342743e-50 | -8.615850e-47 |
| Msa0053210 | Msa0411270 | 0.807508 | 4.884565e-50 | -8.615850e-47 |
| Msa0055530 | Msa0411270 | 0.812102 | 5.019733e-51 | -8.615850e-47 |
| Msa0056160 | Msa0411270 | 0.809518 | 1.819156e-50 | -8.615850e-47 |
| Msa0057740 | Msa0411270 | 0.816791 | 4.608074e-52 | -8.615850e-47 |
| Msa0062750 | Msa0411270 | 0.819083 | 1.398717e-52 | -8.615850e-47 |
| Msa0065390 | Msa0411270 | 0.800157 | 1.644337e-48 | -8.615850e-47 |
| Msa0083160 | Msa0411270 | 0.803259 | 3.796590e-49 | -8.615850e-47 |
| Msa0083570 | Msa0411270 | 0.815436 | 9.253935e-52 | -8.615850e-47 |
| Msa0086820 | Msa0411270 | 0.818756 | 1.659991e-52 | -8.615850e-47 |
| Msa0098700 | Msa0411270 | 0.806839 | 6.768294e-50 | -8.615850e-47 |
| Msa0103060 | Msa0411270 | 0.815657 | 8.260976e-52 | -8.615850e-47 |
| Msa0116950 | Msa0411270 | 0.809692 | 1.668625e-50 | -8.615850e-47 |
| Msa0120120 | Msa0411270 | 0.822085 | 2.860246e-53 | -8.615850e-47 |
| Msa0120180 | Msa0411270 | 0.820004 | 8.623090e-53 | -8.615850e-47 |
| Msa0130120 | Msa0411270 | 0.835831 | 1.334500e-56 | -8.615850e-47 |
| Msa0133670 | Msa0411270 | 0.819454 | 1.151628e-52 | -8.615850e-47 |
| Msa0133880 | Msa0411270 | 0.820591 | 6.326763e-53 | -8.615850e-47 |
| Msa0135400 | Msa0411270 | 0.806314 | 8.735382e-50 | -8.615850e-47 |
| Msa0146600 | Msa0411270 | 0.808171 | 3.530428e-50 | -8.615850e-47 |
| Msa0153640 | Msa0411270 | 0.812299 | 4.547009e-51 | -8.615850e-47 |
| Msa0160470 | Msa0411270 | 0.809343 | 1.983089e-50 | -8.615850e-47 |
| Msa0164630 | Msa0411270 | 0.800506 | 1.396132e-48 | -8.615850e-47 |
| Msa0168900 | Msa0411270 | 0.800781 | 1.226928e-48 | -8.615850e-47 |
| Msa0173850 | Msa0411270 | 0.801770 | 7.696108e-49 | -8.615850e-47 |
| Msa0175900 | Msa0411270 | 0.825172 | 5.417080e-54 | -8.615850e-47 |
| Msa0181290 | Msa0411270 | 0.802629 | 5.123733e-49 | -8.615850e-47 |
| Msa0183490 | Msa0411270 | 0.802249 | 6.136320e-49 | -8.615850e-47 |
| Msa0184120 | Msa0411270 | 0.824395 | 8.262396e-54 | -8.615850e-47 |
| Msa0185550 | Msa0411270 | 0.811062 | 8.447985e-51 | -8.615850e-47 |
| Msa0186750 | Msa0411270 | 0.800790 | 1.221681e-48 | -8.615850e-47 |
| Msa0206600 | Msa0411270 | 0.807049 | 6.110007e-50 | -8.615850e-47 |
| Msa0221940 | Msa0411270 | 0.820479 | 6.710824e-53 | -8.615850e-47 |
| Msa0226800 | Msa0411270 | 0.833273 | 5.863634e-56 | -8.615850e-47 |
| Msa0227960 | Msa0411270 | 0.808560 | 2.916668e-50 | -8.615850e-47 |
| Msa0375430 | Msa0411270 | 0.815066 | 1.118056e-51 | -8.615850e-47 |
| Msa0376480 | Msa0411270 | 0.804017 | 2.643282e-49 | -8.615850e-47 |
| Msa0376900 | Msa0411270 | 0.837600 | 4.722946e-57 | -8.615850e-47 |
| Msa0377460 | Msa0411270 | 0.829142 | 6.074444e-55 | -8.615850e-47 |
| Msa0379900 | Msa0411270 | 0.805759 | 1.142830e-49 | -8.615850e-47 |
| Msa0380420 | Msa0411270 | 0.809722 | 1.644235e-50 | -8.615850e-47 |
| Msa0381990 | Msa0411270 | 0.800084 | 1.701233e-48 | -8.615850e-47 |
| Msa0387120 | Msa0411270 | 0.826171 | 3.140095e-54 | -8.615850e-47 |
| Msa0393540 | Msa0411270 | 0.817010 | 4.116552e-52 | -8.615850e-47 |
| Msa0403670 | Msa0411270 | 0.801450 | 8.952209e-49 | -8.615850e-47 |
| Msa0411260 | Msa0411270 | 0.878917 | 1.905237e-69 | -8.615850e-47 |
| Msa0411270 | Msa0414990 | 0.821746 | 3.427586e-53 | -8.615850e-47 |
| Msa0411270 | Msa0420800 | 0.807000 | 6.257866e-50 | -8.615850e-47 |
| Msa0411270 | Msa0423110 | 0.826422 | 2.736969e-54 | -8.615850e-47 |
| Msa0411270 | Msa0423590 | 0.810917 | 9.080790e-51 | -8.615850e-47 |
| Msa0411270 | Msa0423600 | 0.805565 | 1.255331e-49 | -8.615850e-47 |
| Msa0411270 | Msa0425080 | 0.812223 | 4.722727e-51 | -8.615850e-47 |
| Msa0411270 | Msa0426860 | 0.830433 | 2.945355e-55 | -8.615850e-47 |
| Msa0411270 | Msa0426890 | 0.828229 | 1.009719e-54 | -8.615850e-47 |
| Msa0411270 | Msa0427050 | 0.826144 | 3.187609e-54 | -8.615850e-47 |
| Msa0411270 | Msa0447830 | 0.808183 | 3.510802e-50 | -8.615850e-47 |
| Msa0411270 | Msa0449030 | 0.811045 | 8.519792e-51 | -8.615850e-47 |
| Msa0411270 | Msa0456480 | 0.801363 | 9.327863e-49 | -8.615850e-47 |
| Msa0411270 | Msa0462120 | 0.816682 | 4.875374e-52 | -8.615850e-47 |
| Msa0411270 | Msa0466830 | 0.807129 | 5.877856e-50 | -8.615850e-47 |
| Msa0411270 | Msa0467080 | 0.802322 | 5.926374e-49 | -8.615850e-47 |
| Msa0411270 | Msa0470650 | 0.807656 | 4.543287e-50 | -8.615850e-47 |
| Msa0411270 | Msa0471890 | 0.838142 | 3.427362e-57 | -8.615850e-47 |
| Msa0411270 | Msa0473320 | 0.833566 | 4.953909e-56 | -8.615850e-47 |
| Msa0411270 | Msa0473450 | 0.822086 | 2.858273e-53 | -8.615850e-47 |
| Msa0411270 | Msa0476150 | 0.809227 | 2.100402e-50 | -8.615850e-47 |
| Msa0411270 | Msa0476180 | 0.806379 | 8.466403e-50 | -8.615850e-47 |
| Msa0411270 | Msa0476490 | 0.805436 | 1.335974e-49 | -8.615850e-47 |
| Msa0411270 | Msa0488830 | 0.812525 | 4.058129e-51 | -8.615850e-47 |
| Msa0411270 | Msa0495510 | 0.801186 | 1.014072e-48 | -8.615850e-47 |
| Msa0411270 | Msa0513660 | 0.818839 | 1.589791e-52 | -8.615850e-47 |
| Msa0411270 | Msa0515680 | 0.816708 | 4.809791e-52 | -8.615850e-47 |
| Msa0411270 | Msa0515830 | 0.807258 | 5.518524e-50 | -8.615850e-47 |
| Msa0411270 | Msa0516480 | 0.809875 | 1.524540e-50 | -8.615850e-47 |
| Msa0411270 | Msa0517400 | 0.827215 | 1.769650e-54 | -8.615850e-47 |
| Msa0411270 | Msa0539400 | 0.800249 | 1.574618e-48 | -8.615850e-47 |
| Msa0411270 | Msa0542040 | 0.813096 | 3.042227e-51 | -8.615850e-47 |
| Msa0411270 | Msa0587060 | 0.802612 | 5.164459e-49 | -8.615850e-47 |
| Msa0411270 | Msa0591570 | 0.806733 | 7.127599e-50 | -8.615850e-47 |
| Msa0411270 | Msa0595780 | 0.815625 | 8.399195e-52 | -8.615850e-47 |
| Msa0411270 | Msa0606060 | 0.805774 | 1.134857e-49 | -8.615850e-47 |
| Msa0411270 | Msa0606140 | 0.800647 | 1.306333e-48 | -8.615850e-47 |
| Msa0411270 | Msa0606680 | 0.806614 | 7.552286e-50 | -8.615850e-47 |
| Msa0411270 | Msa0615850 | 0.807838 | 4.157594e-50 | -8.615850e-47 |
| Msa0411270 | Msa0619060 | 0.809510 | 1.826346e-50 | -8.615850e-47 |
| Msa0411270 | Msa0619170 | 0.815794 | 7.703347e-52 | -8.615850e-47 |
| Msa0411270 | Msa0622390 | 0.805950 | 1.042289e-49 | -8.615850e-47 |
| Msa0411270 | Msa0622400 | 0.808892 | 2.477631e-50 | -8.615850e-47 |
| Msa0411270 | Msa0626890 | 0.820026 | 8.523769e-53 | -8.615850e-47 |
| Msa0411270 | Msa0635350 | 0.806115 | 9.622188e-50 | -8.615850e-47 |
| Msa0411270 | Msa0635990 | 0.809746 | 1.624458e-50 | -8.615850e-47 |
| Msa0411270 | Msa0638040 | 0.835676 | 1.460718e-56 | -8.615850e-47 |
| Msa0411270 | Msa0646390 | 0.804854 | 1.768981e-49 | -8.615850e-47 |
| Msa0411270 | Msa0653710 | 0.806000 | 1.017406e-49 | -8.615850e-47 |
| Msa0411270 | Msa0657820 | 0.805202 | 1.495966e-49 | -8.615850e-47 |
| Msa0411270 | Msa0659130 | 0.814197 | 1.741760e-51 | -8.615850e-47 |
| Msa0411270 | Msa0665040 | 0.835830 | 1.335656e-56 | -8.615850e-47 |
| Msa0411270 | Msa0670490 | 0.803780 | 2.960285e-49 | -8.615850e-47 |
| Msa0411270 | Msa0672350 | 0.809814 | 1.571327e-50 | -8.615850e-47 |
| Msa0411270 | Msa0677110 | 0.812617 | 3.874711e-51 | -8.615850e-47 |
| Msa0411270 | Msa0685520 | 0.801382 | 9.243312e-49 | -8.615850e-47 |
| Msa0411270 | Msa0686610 | 0.801662 | 8.099409e-49 | -8.615850e-47 |
| Msa0411270 | Msa0687320 | 0.801217 | 9.993511e-49 | -8.615850e-47 |
| Msa0411270 | Msa0692910 | 0.800503 | 1.397755e-48 | -8.615850e-47 |
| Msa0411270 | Msa0698900 | 0.809770 | 1.605738e-50 | -8.615850e-47 |
| Msa0411270 | Msa0702120 | 0.801508 | 8.710584e-49 | -8.615850e-47 |
| Msa0411270 | Msa0704570 | 0.807062 | 6.072437e-50 | -8.615850e-47 |
| Msa0411270 | Msa0705030 | 0.807253 | 5.532611e-50 | -8.615850e-47 |
| Msa0411270 | Msa0705610 | 0.818675 | 1.731971e-52 | -8.615850e-47 |
| Msa0411270 | Msa0714160 | 0.800124 | 1.669835e-48 | -8.615850e-47 |
| Msa0411270 | Msa0715180 | 0.809787 | 1.592424e-50 | -8.615850e-47 |
| Msa0411270 | Msa0719340 | 0.800464 | 1.423914e-48 | -8.615850e-47 |
| Msa0411270 | Msa0720850 | 0.805511 | 1.288786e-49 | -8.615850e-47 |
| Msa0411270 | Msa0729590 | 0.816574 | 5.155012e-52 | -8.615850e-47 |
| Msa0411270 | Msa0751640 | 0.802301 | 5.987672e-49 | -8.615850e-47 |
| Msa0411270 | Msa0752830 | 0.807673 | 4.506682e-50 | -8.615850e-47 |
| Msa0411270 | Msa0766880 | 0.805017 | 1.635668e-49 | -8.615850e-47 |
| Msa0411270 | Msa0789800 | 0.805648 | 1.206188e-49 | -8.615850e-47 |
| Msa0411270 | Msa0841980 | 0.824581 | 7.468133e-54 | -8.615850e-47 |
| Msa0411270 | Msa0854190 | 0.810300 | 1.234567e-50 | -8.615850e-47 |
| Msa0411270 | Msa0855490 | 0.803166 | 3.968873e-49 | -8.615850e-47 |
| Msa0411270 | Msa0899140 | 0.815951 | 7.106065e-52 | -8.615850e-47 |
| Msa0411270 | Msa0910650 | 0.813094 | 3.045975e-51 | -8.615850e-47 |
| Msa0411270 | Msa0930160 | 0.805074 | 1.591305e-49 | -8.615850e-47 |
| Msa0411270 | Msa0967670 | 0.819314 | 1.239808e-52 | -8.615850e-47 |
| Msa0411270 | Msa0971860 | 0.804564 | 2.033318e-49 | -8.615850e-47 |
| Msa0411270 | Msa0981300 | 0.800843 | 1.191568e-48 | -8.615850e-47 |
| Msa0411270 | Msa0985430 | 0.807572 | 4.733217e-50 | -8.615850e-47 |
| Msa0411270 | Msa0986620 | 0.817907 | 2.584374e-52 | -8.615850e-47 |
| Msa0411270 | Msa1029320 | 0.802858 | 4.595344e-49 | -8.615850e-47 |
| Msa0411270 | Msa1030430 | 0.803268 | 3.780239e-49 | -8.615850e-47 |
| Msa0411270 | Msa1039860 | 0.805631 | 1.216029e-49 | -8.615850e-47 |
| Msa0411270 | Msa1058980 | 0.811110 | 8.247453e-51 | -8.615850e-47 |
| Msa0411270 | Msa1067710 | 0.817445 | 3.286307e-52 | -8.615850e-47 |
| Msa0411270 | Msa1070900 | 0.811002 | 8.702354e-51 | -8.615850e-47 |
| Msa0411270 | Msa1070930 | 0.818039 | 2.413148e-52 | -8.615850e-47 |
| Msa0411270 | Msa1073140 | 0.807785 | 4.266920e-50 | -8.615850e-47 |
| Msa0411270 | Msa1081850 | 0.819834 | 9.432931e-53 | -8.615850e-47 |
| Msa0411270 | Msa1090230 | 0.811875 | 5.625830e-51 | -8.615850e-47 |
| Msa0411270 | Msa1102180 | 0.803091 | 4.112759e-49 | -8.615850e-47 |
| Msa0411270 | Msa1137800 | 0.811410 | 7.098048e-51 | -8.615850e-47 |
| Msa0411270 | Msa1140940 | 0.809054 | 2.286600e-50 | -8.615850e-47 |
| Msa0411270 | Msa1145370 | 0.809097 | 2.238803e-50 | -8.615850e-47 |
| Msa0411270 | Msa1150130 | 0.803271 | 3.775581e-49 | -8.615850e-47 |
| Msa0411270 | Msa1151120 | 0.817504 | 3.187227e-52 | -8.615850e-47 |
| Msa0411270 | Msa1160470 | 0.802350 | 5.849754e-49 | -8.615850e-47 |
| Msa0411270 | Msa1161160 | 0.811266 | 7.628144e-51 | -8.615850e-47 |
| Msa0411270 | Msa1161520 | 0.821870 | 3.208554e-53 | -8.615850e-47 |
| Msa0411270 | Msa1166180 | 0.803826 | 2.896833e-49 | -8.615850e-47 |
| Msa0411270 | Msa1166280 | 0.803388 | 3.569503e-49 | -8.615850e-47 |
| Msa0411270 | Msa1173410 | 0.834081 | 3.683220e-56 | -8.615850e-47 |
| Msa0411270 | Msa1178970 | 0.816600 | 5.087582e-52 | -8.615850e-47 |
| Msa0411270 | Msa1182400 | 0.801596 | 8.357827e-49 | -8.615850e-47 |
| Msa0411270 | Msa1182950 | 0.808588 | 2.876459e-50 | -8.615850e-47 |
| Msa0411270 | Msa1182970 | 0.801444 | 8.976598e-49 | -8.615850e-47 |
| Msa0411270 | Msa1206560 | 0.801353 | 9.373886e-49 | -8.615850e-47 |
| Msa0411270 | Msa1208250 | 0.811286 | 7.553430e-51 | -8.615850e-47 |
| Msa0411270 | Msa1218720 | 0.816424 | 5.569996e-52 | -8.615850e-47 |
| Msa0411270 | Msa1220740 | 0.806443 | 8.205106e-50 | -8.615850e-47 |
| Msa0411270 | Msa1230190 | 0.804388 | 2.212469e-49 | -8.615850e-47 |
| Msa0411270 | Msa1240090 | 0.823931 | 1.061698e-53 | -8.615850e-47 |
| Msa0411270 | Msa1272770 | 0.806749 | 7.073571e-50 | -8.615850e-47 |
| Msa0411270 | Msa1279240 | 0.800288 | 1.546110e-48 | -8.615850e-47 |
| Msa0411270 | Msa1286910 | 0.812100 | 5.023359e-51 | -8.615850e-47 |
| Msa0411270 | Msa1291140 | 0.809464 | 1.867823e-50 | -8.615850e-47 |
| Msa0411270 | Msa1300880 | 0.814556 | 1.450840e-51 | -8.615850e-47 |
| Msa0411270 | Msa1302920 | 0.802360 | 5.821211e-49 | -8.615850e-47 |
| Msa0411270 | Msa1309100 | 0.803415 | 3.524021e-49 | -8.615850e-47 |
| Msa0411270 | Msa1309910 | 0.824616 | 7.329056e-54 | -8.615850e-47 |
| Msa0411270 | Msa1327040 | 0.801333 | 9.459658e-49 | -8.615850e-47 |
| Msa0411270 | Msa1331900 | 0.809177 | 2.152191e-50 | -8.615850e-47 |
| Msa0411270 | Msa1334650 | 0.804266 | 2.345443e-49 | -8.615850e-47 |
| Msa0411270 | Msa1335130 | 0.808761 | 2.641910e-50 | -8.615850e-47 |
| Msa0411270 | Msa1345120 | 0.805543 | 1.268716e-49 | -8.615850e-47 |
| Msa0411270 | Msa1348770 | 0.823190 | 1.583001e-53 | -8.615850e-47 |
| Msa0411270 | Msa1349640 | 0.816813 | 4.558166e-52 | -8.615850e-47 |
| Msa0411270 | Msa1351560 | 0.804380 | 2.220769e-49 | -8.615850e-47 |
| Msa0411270 | Msa1352820 | 0.810752 | 9.858589e-51 | -8.615850e-47 |
| Msa0411270 | Msa1357380 | 0.810073 | 1.381684e-50 | -8.615850e-47 |
| Msa0411270 | Msa1365210 | 0.800651 | 1.304249e-48 | -8.615850e-47 |
| Msa0411270 | Msa1366700 | 0.817317 | 3.510821e-52 | -8.615850e-47 |
| Msa0411270 | Msa1373340 | 0.808321 | 3.280295e-50 | -8.615850e-47 |
| Msa0411270 | Msa1374850 | 0.802104 | 6.572207e-49 | -8.615850e-47 |
| Msa0411270 | Msa1375630 | 0.809461 | 1.871058e-50 | -8.615850e-47 |
| Msa0411270 | Msa1376530 | 0.802116 | 6.536078e-49 | -8.615850e-47 |
| Msa0411270 | Msa1385940 | 0.837881 | 4.000902e-57 | -8.615850e-47 |
| Msa0411270 | Msa1392680 | 0.818985 | 1.472735e-52 | -8.615850e-47 |
| Msa0411270 | Msa1395640 | 0.818553 | 1.845926e-52 | -8.615850e-47 |
| Msa0411270 | Msa1397110 | 0.839011 | 2.044309e-57 | -8.615850e-47 |
| Msa0411270 | Msa1403900 | 0.832466 | 9.304759e-56 | -8.615850e-47 |
| Msa0411270 | Msa1408190 | 0.816941 | 4.264338e-52 | -8.615850e-47 |
| Msa0411270 | Msa1410170 | 0.808541 | 2.944033e-50 | -8.615850e-47 |
| Msa0411270 | Msa1419040 | 0.808831 | 2.552929e-50 | -8.615850e-47 |
| Msa0411270 | Msa1420130 | 0.800557 | 1.362804e-48 | -8.615850e-47 |
| Msa0411270 | Msa1425110 | 0.815073 | 1.114390e-51 | -8.615850e-47 |
| Msa0411270 | Msa1427020 | 0.808252 | 3.393371e-50 | -8.615850e-47 |
| Msa0411270 | Msa1432250 | 0.802196 | 6.292468e-49 | -8.615850e-47 |
| Msa0411270 | Msa1433380 | 0.800587 | 1.343906e-48 | -8.615850e-47 |
| Msa0411270 | Msa1435470 | 0.807482 | 4.947468e-50 | -8.615850e-47 |
| Msa0411270 | Msa1439800 | 0.807483 | 4.945237e-50 | -8.615850e-47 |
| Msa0411270 | Msa1448990 | 0.818096 | 2.342084e-52 | -8.615850e-47 |
| Msa0411270 | Msa1450420 | 0.804359 | 2.243815e-49 | -8.615850e-47 |
| Msa0411270 | Msa1450850 | 0.816159 | 6.384421e-52 | -8.615850e-47 |
| Msa0411270 | Msa1458920 | 0.802001 | 6.902146e-49 | -8.615850e-47 |
| Msa0411270 | Msa1459590 | 0.812056 | 5.137012e-51 | -8.615850e-47 |
| Msa0411270 | Msa1466170 | 0.800326 | 1.519191e-48 | -8.615850e-47 |
| Msa0244320 | Msa0411270 | 0.821559 | 3.785033e-53 | -8.615850e-47 |
| Msa0264020 | Msa0411270 | 0.801257 | 9.804141e-49 | -8.615850e-47 |
| Msa0282860 | Msa0411270 | 0.800735 | 1.253677e-48 | -8.615850e-47 |
| Msa0292150 | Msa0411270 | 0.825275 | 5.123967e-54 | -8.615850e-47 |
| Msa0304870 | Msa0411270 | 0.826492 | 2.634060e-54 | -8.615850e-47 |
| Msa0330370 | Msa0411270 | 0.810719 | 1.002190e-50 | -8.615850e-47 |
| Msa0341260 | Msa0411270 | 0.825046 | 5.803803e-54 | -8.615850e-47 |
| Msa0349000 | Msa0411270 | 0.815064 | 1.119447e-51 | -8.615850e-47 |
| Msa0355590 | Msa0411270 | 0.811936 | 5.455405e-51 | -8.615850e-47 |
| Msa0358720 | Msa0411270 | 0.800666 | 1.294794e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0411270 | MtrunA17_Chr3g0102541 | 88.312 | 77 | 9 | 0 | 7 | 83 | 446 | 522 | 3.80e-41 | 144 |
| Msa0411270 | MtrunA17_Chr3g0102541 | 68.889 | 45 | 13 | 1 | 66 | 110 | 600 | 643 | 7.84e-13 | 63.2 |
| Msa0411270 | MtrunA17_Chr3g0102531 | 83.117 | 77 | 13 | 0 | 7 | 83 | 445 | 521 | 2.13e-39 | 139 |
| Msa0411270 | MtrunA17_Chr3g0102531 | 71.111 | 45 | 12 | 1 | 66 | 110 | 599 | 642 | 5.21e-13 | 63.9 |
| Msa0411270 | MtrunA17_Chr3g0102551 | 73.239 | 71 | 19 | 0 | 7 | 77 | 451 | 521 | 1.36e-30 | 114 |
| Msa0411270 | MtrunA17_Chr8g0383701 | 41.463 | 82 | 45 | 1 | 7 | 88 | 797 | 875 | 9.71e-15 | 68.9 |
| Msa0411270 | MtrunA17_Chr2g0296991 | 46.032 | 63 | 34 | 0 | 7 | 69 | 745 | 807 | 1.48e-14 | 68.2 |
| Msa0411270 | MtrunA17_Chr8g0379241 | 44.444 | 63 | 35 | 0 | 7 | 69 | 689 | 751 | 2.55e-14 | 67.8 |
| Msa0411270 | MtrunA17_Chr2g0284211 | 42.857 | 63 | 36 | 0 | 7 | 69 | 677 | 739 | 8.17e-14 | 66.2 |
| Msa0411270 | MtrunA17_Chr1g0201731 | 46.032 | 63 | 34 | 0 | 7 | 69 | 798 | 860 | 1.52e-13 | 65.5 |
| Msa0411270 | MtrunA17_Chr7g0267731 | 42.857 | 63 | 36 | 0 | 7 | 69 | 686 | 748 | 1.94e-13 | 65.1 |
| Msa0411270 | MtrunA17_Chr8g0352231 | 42.857 | 63 | 36 | 0 | 7 | 69 | 778 | 840 | 2.11e-13 | 65.1 |
| Msa0411270 | MtrunA17_Chr1g0183381 | 43.548 | 62 | 35 | 0 | 7 | 68 | 606 | 667 | 3.92e-13 | 64.3 |
| Msa0411270 | MtrunA17_Chr8g0364641 | 43.750 | 64 | 36 | 0 | 5 | 68 | 677 | 740 | 1.15e-12 | 62.8 |
| Msa0411270 | MtrunA17_Chr3g0137951 | 37.838 | 74 | 45 | 1 | 7 | 79 | 786 | 859 | 3.81e-12 | 61.2 |
| Msa0411270 | MtrunA17_Chr4g0073711 | 40.984 | 61 | 36 | 0 | 7 | 67 | 738 | 798 | 3.84e-12 | 61.2 |
| Msa0411270 | MtrunA17_Chr3g0088821 | 41.935 | 62 | 36 | 0 | 7 | 68 | 778 | 839 | 4.20e-12 | 61.2 |
| Msa0411270 | MtrunA17_Chr4g0046401 | 42.857 | 70 | 39 | 1 | 7 | 76 | 453 | 521 | 9.79e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0411270 | AT1G55850.1 | 65.217 | 69 | 24 | 0 | 7 | 75 | 443 | 511 | 2.54e-26 | 102 |
| Msa0411270 | AT4G39350.1 | 41.463 | 82 | 45 | 1 | 7 | 88 | 784 | 862 | 1.41e-14 | 68.6 |
| Msa0411270 | AT2G21770.1 | 41.463 | 82 | 45 | 1 | 7 | 88 | 788 | 866 | 1.50e-14 | 68.6 |
| Msa0411270 | AT5G44030.2 | 46.032 | 63 | 34 | 0 | 7 | 69 | 777 | 839 | 3.75e-14 | 67.4 |
| Msa0411270 | AT5G44030.1 | 46.032 | 63 | 34 | 0 | 7 | 69 | 748 | 810 | 3.82e-14 | 67.4 |
| Msa0411270 | AT5G44030.3 | 46.032 | 63 | 34 | 0 | 7 | 69 | 469 | 531 | 4.04e-14 | 67.4 |
| Msa0411270 | AT4G32410.1 | 45.161 | 62 | 34 | 0 | 7 | 68 | 780 | 841 | 2.01e-13 | 65.5 |
| Msa0411270 | AT5G17420.1 | 41.935 | 62 | 36 | 0 | 7 | 68 | 726 | 787 | 2.51e-13 | 65.1 |
| Msa0411270 | AT4G24010.1 | 42.500 | 80 | 44 | 1 | 7 | 86 | 447 | 524 | 4.66e-13 | 64.3 |
| Msa0411270 | AT4G18780.1 | 42.623 | 61 | 35 | 0 | 7 | 67 | 683 | 743 | 9.56e-13 | 63.5 |
| Msa0411270 | AT2G25540.1 | 42.857 | 63 | 36 | 0 | 7 | 69 | 760 | 822 | 1.59e-12 | 62.8 |
| Msa0411270 | AT5G64740.1 | 42.857 | 63 | 36 | 0 | 7 | 69 | 785 | 847 | 5.26e-12 | 61.2 |
| Msa0411270 | AT4G23990.1 | 40.000 | 75 | 43 | 1 | 7 | 81 | 466 | 538 | 7.07e-12 | 60.8 |
| Msa0411270 | AT5G09870.1 | 42.857 | 63 | 36 | 0 | 7 | 69 | 770 | 832 | 7.32e-12 | 60.8 |
| Msa0411270 | AT4G23990.2 | 40.000 | 75 | 43 | 1 | 7 | 81 | 252 | 324 | 8.97e-12 | 60.8 |
| Msa0411270 | AT5G05170.1 | 40.323 | 62 | 37 | 0 | 7 | 68 | 765 | 826 | 2.61e-11 | 59.3 |
| Msa0411270 | AT4G15320.2 | 41.379 | 58 | 34 | 0 | 7 | 64 | 506 | 563 | 9.39e-11 | 57.8 |
Find 20 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAAAGTTCAGTCCTATT+TGG | 0.223598 | 3_2:+53485628 | Msa0411270:CDS |
| AGTCCTATTTGGTACGCTTT+TGG | 0.262148 | 3_2:+53485639 | Msa0411270:CDS |
| CCAACAAGGAAAGCTTTCTT+AGG | 0.270056 | 3_2:+53485531 | Msa0411270:CDS |
| TTATGTTGAACAAGTGATTC+TGG | 0.278433 | 3_2:-53485573 | None:intergenic |
| CCTAAGAAAGCTTTCCTTGT+TGG | 0.298769 | 3_2:-53485531 | None:intergenic |
| GAGAAGGATATTATGGAGTT+TGG | 0.300136 | 3_2:+53486373 | Msa0411270:CDS |
| AAGATATGAGAAGGATATTA+TGG | 0.313246 | 3_2:+53486366 | Msa0411270:CDS |
| AATCCAAAAGCGTACCAAAT+AGG | 0.362728 | 3_2:-53485642 | None:intergenic |
| AGTGATTCTGGCAAGGTTGT+TGG | 0.401127 | 3_2:-53485561 | None:intergenic |
| AGTGACAGTAAGACATTTGA+AGG | 0.417903 | 3_2:-53485677 | None:intergenic |
| AAATTTCATAATATCTACTA+AGG | 0.468679 | 3_2:+53486321 | Msa0411270:CDS |
| CAGTAAGACATTTGAAGGCC+TGG | 0.486113 | 3_2:-53485672 | None:intergenic |
| CAGTGTGGAGATGTAATAAC+AGG | 0.506505 | 3_2:+53485465 | Msa0411270:CDS |
| CCTTGTTGGATTATAGTACA+CGG | 0.570690 | 3_2:-53485517 | None:intergenic |
| CACTTGTTCAACATAAGAGA+TGG | 0.602865 | 3_2:+53485580 | Msa0411270:CDS |
| CAACATAAGAGATGGTCTGA+AGG | 0.609206 | 3_2:+53485588 | Msa0411270:CDS |
| TGTTTCACAAAGATATGAGA+AGG | 0.620914 | 3_2:+53486357 | Msa0411270:CDS |
| CCGTGTACTATAATCCAACA+AGG | 0.621803 | 3_2:+53485517 | Msa0411270:CDS |
| TTGAACAAGTGATTCTGGCA+AGG | 0.652845 | 3_2:-53485568 | None:intergenic |
| TATTATATGGTTGTGCAGTG+TGG | 0.658058 | 3_2:+53485450 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTGTTATTAGTAAAATTC+AGG | + | chr3_2:53485943-53485962 | Msa0411270:intron | 15.0% |
| !! | AAATTTCATAATATCTACTA+AGG | + | chr3_2:53486321-53486340 | Msa0411270:CDS | 15.0% |
| !!! | TATTGTTATTAGTAAAATTC+AGG | + | chr3_2:53485943-53485962 | Msa0411270:intron | 15.0% |
| !! | AAATTTCATAATATCTACTA+AGG | + | chr3_2:53486321-53486340 | Msa0411270:CDS | 15.0% |
| !! | GGATTATCTATTTTATGCAA+AGG | + | chr3_2:53485486-53485505 | Msa0411270:CDS | 25.0% |
| !! | TATCTATTTTATGCAAAGGA+TGG | + | chr3_2:53485490-53485509 | Msa0411270:CDS | 25.0% |
| ! | TTACTGTCACTATAATATGT+GGG | + | chr3_2:53485689-53485708 | Msa0411270:intron | 25.0% |
| !! | ATGATGGAATAATACATAGT+TGG | - | chr3_2:53485729-53485748 | None:intergenic | 25.0% |
| !! | TAGTAAAATTTTCATACCTG+TGG | - | chr3_2:53485789-53485808 | None:intergenic | 25.0% |
| !! | TATCCTTTAGAAGAGATAAT+TGG | + | chr3_2:53485918-53485937 | Msa0411270:intron | 25.0% |
| ! | AAACCAATTATCTCTTCTAA+AGG | - | chr3_2:53485924-53485943 | None:intergenic | 25.0% |
| ! | TTGCAATATAACGTTTATAG+AGG | - | chr3_2:53486018-53486037 | None:intergenic | 25.0% |
| !! | TTTTGTTGATACCATGTTAA+AGG | + | chr3_2:53486278-53486297 | Msa0411270:intron | 25.0% |
| !!! | ATACCATGTTAAAGGTTTTT+TGG | + | chr3_2:53486286-53486305 | Msa0411270:intron | 25.0% |
| ! | AATCCAAAAAACCTTTAACA+TGG | - | chr3_2:53486292-53486311 | None:intergenic | 25.0% |
| ! | AAGATATGAGAAGGATATTA+TGG | + | chr3_2:53486366-53486385 | Msa0411270:CDS | 25.0% |
| !! | GGATTATCTATTTTATGCAA+AGG | + | chr3_2:53485486-53485505 | Msa0411270:CDS | 25.0% |
| !! | TATCTATTTTATGCAAAGGA+TGG | + | chr3_2:53485490-53485509 | Msa0411270:CDS | 25.0% |
| ! | TTACTGTCACTATAATATGT+GGG | + | chr3_2:53485689-53485708 | Msa0411270:intron | 25.0% |
| !! | ATGATGGAATAATACATAGT+TGG | - | chr3_2:53485729-53485748 | None:intergenic | 25.0% |
| !! | TAGTAAAATTTTCATACCTG+TGG | - | chr3_2:53485789-53485808 | None:intergenic | 25.0% |
| !! | TATCCTTTAGAAGAGATAAT+TGG | + | chr3_2:53485918-53485937 | Msa0411270:intron | 25.0% |
| ! | AAACCAATTATCTCTTCTAA+AGG | - | chr3_2:53485924-53485943 | None:intergenic | 25.0% |
| ! | TTGCAATATAACGTTTATAG+AGG | - | chr3_2:53486018-53486037 | None:intergenic | 25.0% |
| !! | TTTTGTTGATACCATGTTAA+AGG | + | chr3_2:53486278-53486297 | Msa0411270:intron | 25.0% |
| !!! | ATACCATGTTAAAGGTTTTT+TGG | + | chr3_2:53486286-53486305 | Msa0411270:intron | 25.0% |
| ! | AATCCAAAAAACCTTTAACA+TGG | - | chr3_2:53486292-53486311 | None:intergenic | 25.0% |
| ! | AAGATATGAGAAGGATATTA+TGG | + | chr3_2:53486366-53486385 | Msa0411270:CDS | 25.0% |
| TTATGTTGAACAAGTGATTC+TGG | - | chr3_2:53485576-53485595 | None:intergenic | 30.0% | |
| TTTCAAAGTTCAGTCCTATT+TGG | + | chr3_2:53485628-53485647 | Msa0411270:CDS | 30.0% | |
| CTTACTGTCACTATAATATG+TGG | + | chr3_2:53485688-53485707 | Msa0411270:intron | 30.0% | |
| GGAATAATACATAGTTGGAA+AGG | - | chr3_2:53485724-53485743 | None:intergenic | 30.0% | |
| CTACATCAGTTCCTATATAT+AGG | + | chr3_2:53485806-53485825 | Msa0411270:intron | 30.0% | |
| ATTGATCAGATTTAAGTCCT+TGG | + | chr3_2:53486113-53486132 | Msa0411270:intron | 30.0% | |
| !! | TGTTTGTTAGAGTTTTTGTG+AGG | + | chr3_2:53486178-53486197 | Msa0411270:intron | 30.0% |
| !! | GTTTGTTAGAGTTTTTGTGA+GGG | + | chr3_2:53486179-53486198 | Msa0411270:intron | 30.0% |
| TGGTATCAACAAAAGCAAAA+AGG | - | chr3_2:53486272-53486291 | None:intergenic | 30.0% | |
| TGTTTCACAAAGATATGAGA+AGG | + | chr3_2:53486357-53486376 | Msa0411270:CDS | 30.0% | |
| TTATGTTGAACAAGTGATTC+TGG | - | chr3_2:53485576-53485595 | None:intergenic | 30.0% | |
| TTTCAAAGTTCAGTCCTATT+TGG | + | chr3_2:53485628-53485647 | Msa0411270:CDS | 30.0% | |
| CTTACTGTCACTATAATATG+TGG | + | chr3_2:53485688-53485707 | Msa0411270:intron | 30.0% | |
| GGAATAATACATAGTTGGAA+AGG | - | chr3_2:53485724-53485743 | None:intergenic | 30.0% | |
| CTACATCAGTTCCTATATAT+AGG | + | chr3_2:53485806-53485825 | Msa0411270:intron | 30.0% | |
| ATTGATCAGATTTAAGTCCT+TGG | + | chr3_2:53486113-53486132 | Msa0411270:intron | 30.0% | |
| !! | TGTTTGTTAGAGTTTTTGTG+AGG | + | chr3_2:53486178-53486197 | Msa0411270:intron | 30.0% |
| !! | GTTTGTTAGAGTTTTTGTGA+GGG | + | chr3_2:53486179-53486198 | Msa0411270:intron | 30.0% |
| TGGTATCAACAAAAGCAAAA+AGG | - | chr3_2:53486272-53486291 | None:intergenic | 30.0% | |
| TGTTTCACAAAGATATGAGA+AGG | + | chr3_2:53486357-53486376 | Msa0411270:CDS | 30.0% | |
| CCTTGTTGGATTATAGTACA+CGG | - | chr3_2:53485520-53485539 | None:intergenic | 35.0% | |
| CACTTGTTCAACATAAGAGA+TGG | + | chr3_2:53485580-53485599 | Msa0411270:CDS | 35.0% | |
| ! | AATCCAAAAGCGTACCAAAT+AGG | - | chr3_2:53485645-53485664 | None:intergenic | 35.0% |
| AGTGACAGTAAGACATTTGA+AGG | - | chr3_2:53485680-53485699 | None:intergenic | 35.0% | |
| ! | GAGAAAAAGTGAAGGTATGA+TGG | - | chr3_2:53485745-53485764 | None:intergenic | 35.0% |
| TTTCATACCTGTGGAAACAA+GGG | - | chr3_2:53485780-53485799 | None:intergenic | 35.0% | |
| ! | TTTTCATACCTGTGGAAACA+AGG | - | chr3_2:53485781-53485800 | None:intergenic | 35.0% |
| CACAACGAGATCCTATATAT+AGG | - | chr3_2:53485820-53485839 | None:intergenic | 35.0% | |
| TATTGCAATCACAATTGCAG+TGG | + | chr3_2:53486030-53486049 | Msa0411270:intron | 35.0% | |
| ! | TATGCAAAAGGTATGAACCA+AGG | - | chr3_2:53486133-53486152 | None:intergenic | 35.0% |
| CCAACTATGACATATGCAAA+AGG | - | chr3_2:53486145-53486164 | None:intergenic | 35.0% | |
| ! | CCTTTTGCATATGTCATAGT+TGG | + | chr3_2:53486142-53486161 | Msa0411270:intron | 35.0% |
| GAGAAGGATATTATGGAGTT+TGG | + | chr3_2:53486373-53486392 | Msa0411270:CDS | 35.0% | |
| CCTTGTTGGATTATAGTACA+CGG | - | chr3_2:53485520-53485539 | None:intergenic | 35.0% | |
| CACTTGTTCAACATAAGAGA+TGG | + | chr3_2:53485580-53485599 | Msa0411270:CDS | 35.0% | |
| ! | AATCCAAAAGCGTACCAAAT+AGG | - | chr3_2:53485645-53485664 | None:intergenic | 35.0% |
| AGTGACAGTAAGACATTTGA+AGG | - | chr3_2:53485680-53485699 | None:intergenic | 35.0% | |
| ! | GAGAAAAAGTGAAGGTATGA+TGG | - | chr3_2:53485745-53485764 | None:intergenic | 35.0% |
| TTTCATACCTGTGGAAACAA+GGG | - | chr3_2:53485780-53485799 | None:intergenic | 35.0% | |
| ! | TTTTCATACCTGTGGAAACA+AGG | - | chr3_2:53485781-53485800 | None:intergenic | 35.0% |
| CACAACGAGATCCTATATAT+AGG | - | chr3_2:53485820-53485839 | None:intergenic | 35.0% | |
| TATTGCAATCACAATTGCAG+TGG | + | chr3_2:53486030-53486049 | Msa0411270:intron | 35.0% | |
| ! | TATGCAAAAGGTATGAACCA+AGG | - | chr3_2:53486133-53486152 | None:intergenic | 35.0% |
| CCAACTATGACATATGCAAA+AGG | - | chr3_2:53486145-53486164 | None:intergenic | 35.0% | |
| ! | CCTTTTGCATATGTCATAGT+TGG | + | chr3_2:53486142-53486161 | Msa0411270:intron | 35.0% |
| GAGAAGGATATTATGGAGTT+TGG | + | chr3_2:53486373-53486392 | Msa0411270:CDS | 35.0% | |
| CAGTGTGGAGATGTAATAAC+AGG | + | chr3_2:53485465-53485484 | Msa0411270:CDS | 40.0% | |
| CCGTGTACTATAATCCAACA+AGG | + | chr3_2:53485517-53485536 | Msa0411270:CDS | 40.0% | |
| CCTAAGAAAGCTTTCCTTGT+TGG | - | chr3_2:53485534-53485553 | None:intergenic | 40.0% | |
| CCAACAAGGAAAGCTTTCTT+AGG | + | chr3_2:53485531-53485550 | Msa0411270:CDS | 40.0% | |
| TTGAACAAGTGATTCTGGCA+AGG | - | chr3_2:53485571-53485590 | None:intergenic | 40.0% | |
| CAACATAAGAGATGGTCTGA+AGG | + | chr3_2:53485588-53485607 | Msa0411270:CDS | 40.0% | |
| ! | AGTCCTATTTGGTACGCTTT+TGG | + | chr3_2:53485639-53485658 | Msa0411270:CDS | 40.0% |
| !! | GCTTTTGGATTGATTAGTCC+AGG | + | chr3_2:53485654-53485673 | Msa0411270:CDS | 40.0% |
| ! | CCTTTGAGGAGAAAAAGTGA+AGG | - | chr3_2:53485753-53485772 | None:intergenic | 40.0% |
| !!! | CCTTCACTTTTTCTCCTCAA+AGG | + | chr3_2:53485750-53485769 | Msa0411270:intron | 40.0% |
| TTCAGGCAAATGTAACCATG+TGG | + | chr3_2:53485960-53485979 | Msa0411270:intron | 40.0% | |
| ! | GTTAGAGTTTTTGTGAGGGT+AGG | + | chr3_2:53486183-53486202 | Msa0411270:intron | 40.0% |
| AGGAGGTTACACTTAAAGGT+TGG | + | chr3_2:53486203-53486222 | Msa0411270:intron | 40.0% | |
| AGGTTACACTTAAAGGTTGG+TGG | + | chr3_2:53486206-53486225 | Msa0411270:intron | 40.0% | |
| !! | ACTTAAAGGTTGGTGGAATG+AGG | + | chr3_2:53486213-53486232 | Msa0411270:intron | 40.0% |
| CAGTGTGGAGATGTAATAAC+AGG | + | chr3_2:53485465-53485484 | Msa0411270:CDS | 40.0% | |
| CCGTGTACTATAATCCAACA+AGG | + | chr3_2:53485517-53485536 | Msa0411270:CDS | 40.0% | |
| CCTAAGAAAGCTTTCCTTGT+TGG | - | chr3_2:53485534-53485553 | None:intergenic | 40.0% | |
| CCAACAAGGAAAGCTTTCTT+AGG | + | chr3_2:53485531-53485550 | Msa0411270:CDS | 40.0% | |
| TTGAACAAGTGATTCTGGCA+AGG | - | chr3_2:53485571-53485590 | None:intergenic | 40.0% | |
| CAACATAAGAGATGGTCTGA+AGG | + | chr3_2:53485588-53485607 | Msa0411270:CDS | 40.0% | |
| ! | AGTCCTATTTGGTACGCTTT+TGG | + | chr3_2:53485639-53485658 | Msa0411270:CDS | 40.0% |
| !! | GCTTTTGGATTGATTAGTCC+AGG | + | chr3_2:53485654-53485673 | Msa0411270:CDS | 40.0% |
| ! | CCTTTGAGGAGAAAAAGTGA+AGG | - | chr3_2:53485753-53485772 | None:intergenic | 40.0% |
| !!! | CCTTCACTTTTTCTCCTCAA+AGG | + | chr3_2:53485750-53485769 | Msa0411270:intron | 40.0% |
| TTCAGGCAAATGTAACCATG+TGG | + | chr3_2:53485960-53485979 | Msa0411270:intron | 40.0% | |
| ! | GTTAGAGTTTTTGTGAGGGT+AGG | + | chr3_2:53486183-53486202 | Msa0411270:intron | 40.0% |
| AGGAGGTTACACTTAAAGGT+TGG | + | chr3_2:53486203-53486222 | Msa0411270:intron | 40.0% | |
| AGGTTACACTTAAAGGTTGG+TGG | + | chr3_2:53486206-53486225 | Msa0411270:intron | 40.0% | |
| !! | ACTTAAAGGTTGGTGGAATG+AGG | + | chr3_2:53486213-53486232 | Msa0411270:intron | 40.0% |
| AGTGATTCTGGCAAGGTTGT+TGG | - | chr3_2:53485564-53485583 | None:intergenic | 45.0% | |
| CAGTAAGACATTTGAAGGCC+TGG | - | chr3_2:53485675-53485694 | None:intergenic | 45.0% | |
| GAAACAAGGGAATGCCTTTG+AGG | - | chr3_2:53485767-53485786 | None:intergenic | 45.0% | |
| TGACATCACAACCACACTTG+CGG | - | chr3_2:53485986-53486005 | None:intergenic | 45.0% | |
| ! | AGAGTTTTTGTGAGGGTAGG+AGG | + | chr3_2:53486186-53486205 | Msa0411270:intron | 45.0% |
| GGGTAGGAGGTTACACTTAA+AGG | + | chr3_2:53486199-53486218 | Msa0411270:intron | 45.0% | |
| AGTGATTCTGGCAAGGTTGT+TGG | - | chr3_2:53485564-53485583 | None:intergenic | 45.0% | |
| CAGTAAGACATTTGAAGGCC+TGG | - | chr3_2:53485675-53485694 | None:intergenic | 45.0% | |
| GAAACAAGGGAATGCCTTTG+AGG | - | chr3_2:53485767-53485786 | None:intergenic | 45.0% | |
| TGACATCACAACCACACTTG+CGG | - | chr3_2:53485986-53486005 | None:intergenic | 45.0% | |
| ! | AGAGTTTTTGTGAGGGTAGG+AGG | + | chr3_2:53486186-53486205 | Msa0411270:intron | 45.0% |
| GGGTAGGAGGTTACACTTAA+AGG | + | chr3_2:53486199-53486218 | Msa0411270:intron | 45.0% | |
| ! | AGGCATTCCCTTGTTTCCAC+AGG | + | chr3_2:53485770-53485789 | Msa0411270:intron | 50.0% |
| !! | AAGGTTGGTGGAATGAGGTG+AGG | + | chr3_2:53486218-53486237 | Msa0411270:intron | 50.0% |
| ! | AGGCATTCCCTTGTTTCCAC+AGG | + | chr3_2:53485770-53485789 | Msa0411270:intron | 50.0% |
| !! | AAGGTTGGTGGAATGAGGTG+AGG | + | chr3_2:53486218-53486237 | Msa0411270:intron | 50.0% |
| TAACCATGTGGCCGCAAGTG+TGG | + | chr3_2:53485972-53485991 | Msa0411270:intron | 55.0% | |
| GGTGGAATGAGGTGAGGATG+TGG | + | chr3_2:53486224-53486243 | Msa0411270:intron | 55.0% | |
| TAACCATGTGGCCGCAAGTG+TGG | + | chr3_2:53485972-53485991 | Msa0411270:intron | 55.0% | |
| GGTGGAATGAGGTGAGGATG+TGG | + | chr3_2:53486224-53486243 | Msa0411270:intron | 55.0% | |
| CAACCACACTTGCGGCCACA+TGG | - | chr3_2:53485978-53485997 | None:intergenic | 60.0% | |
| CAACCACACTTGCGGCCACA+TGG | - | chr3_2:53485978-53485997 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 53485456 | 53486411 | 53485456 | ID=Msa0411270;Name=Msa0411270 |
| chr3_2 | mRNA | 53485456 | 53486411 | 53485456 | ID=Msa0411270-mRNA-1;Parent=Msa0411270;Name=Msa0411270-mRNA-1;_AED=0.47;_eAED=0.48;_QI=0|0|0|1|1|1|2|0|113 |
| chr3_2 | exon | 53485456 | 53485685 | 53485456 | ID=Msa0411270-mRNA-1:exon:10688;Parent=Msa0411270-mRNA-1 |
| chr3_2 | exon | 53486300 | 53486411 | 53486300 | ID=Msa0411270-mRNA-1:exon:10689;Parent=Msa0411270-mRNA-1 |
| chr3_2 | CDS | 53485456 | 53485685 | 53485456 | ID=Msa0411270-mRNA-1:cds;Parent=Msa0411270-mRNA-1 |
| chr3_2 | CDS | 53486300 | 53486411 | 53486300 | ID=Msa0411270-mRNA-1:cds;Parent=Msa0411270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
