Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115810 | KEH44416.1 | 94.222 | 225 | 10 | 2 | 12 | 233 | 14 | 238 | 3.52e-150 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115810 | sp|Q39056|CNX3_ARATH | 58.712 | 264 | 71 | 8 | 1 | 230 | 9 | 268 | 9.01e-89 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115810 | A0A072VRX8 | 94.222 | 225 | 10 | 2 | 12 | 233 | 14 | 238 | 1.68e-150 | 427 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0115810 | -0.834938 | 2.243085e-56 | -8.615850e-47 |
| Msa0007080 | Msa0115810 | 0.810109 | 1.357345e-50 | -8.615850e-47 |
| Msa0011720 | Msa0115810 | 0.805055 | 1.605353e-49 | -8.615850e-47 |
| Msa0015120 | Msa0115810 | 0.802570 | 5.269204e-49 | -8.615850e-47 |
| Msa0015300 | Msa0115810 | 0.822605 | 2.166422e-53 | -8.615850e-47 |
| Msa0017510 | Msa0115810 | 0.809596 | 1.750286e-50 | -8.615850e-47 |
| Msa0036920 | Msa0115810 | 0.802590 | 5.220585e-49 | -8.615850e-47 |
| Msa0048000 | Msa0115810 | 0.840846 | 6.798646e-58 | -8.615850e-47 |
| Msa0050730 | Msa0115810 | 0.800288 | 1.546459e-48 | -8.615850e-47 |
| Msa0050760 | Msa0115810 | 0.819997 | 8.653422e-53 | -8.615850e-47 |
| Msa0064290 | Msa0115810 | 0.811909 | 5.529726e-51 | -8.615850e-47 |
| Msa0077610 | Msa0115810 | 0.811538 | 6.658003e-51 | -8.615850e-47 |
| Msa0077670 | Msa0115810 | 0.804010 | 2.651732e-49 | -8.615850e-47 |
| Msa0092990 | Msa0115810 | 0.815007 | 1.152690e-51 | -8.615850e-47 |
| Msa0101810 | Msa0115810 | -0.817976 | 2.493714e-52 | -8.615850e-47 |
| Msa0102750 | Msa0115810 | 0.814914 | 1.208893e-51 | -8.615850e-47 |
| Msa0105420 | Msa0115810 | 0.840037 | 1.106592e-57 | -8.615850e-47 |
| Msa0112750 | Msa0115810 | 0.809792 | 1.588214e-50 | -8.615850e-47 |
| Msa0113970 | Msa0115810 | 0.806706 | 7.220619e-50 | -8.615850e-47 |
| Msa0115810 | Msa0120340 | 0.821313 | 4.314155e-53 | -8.615850e-47 |
| Msa0115810 | Msa0122590 | 0.840025 | 1.114676e-57 | -8.615850e-47 |
| Msa0115810 | Msa0122810 | 0.808289 | 3.331632e-50 | -8.615850e-47 |
| Msa0115810 | Msa0141620 | 0.808827 | 2.557131e-50 | -8.615850e-47 |
| Msa0115810 | Msa0150800 | 0.806345 | 8.605292e-50 | -8.615850e-47 |
| Msa0115810 | Msa0157290 | 0.809162 | 2.168532e-50 | -8.615850e-47 |
| Msa0115810 | Msa0165510 | 0.802321 | 5.928920e-49 | -8.615850e-47 |
| Msa0115810 | Msa0166870 | 0.807711 | 4.424025e-50 | -8.615850e-47 |
| Msa0115810 | Msa0170140 | 0.807923 | 3.987520e-50 | -8.615850e-47 |
| Msa0115810 | Msa0170570 | 0.800226 | 1.591833e-48 | -8.615850e-47 |
| Msa0115810 | Msa0173990 | 0.837872 | 4.022091e-57 | -8.615850e-47 |
| Msa0115810 | Msa0185590 | 0.811970 | 5.364163e-51 | -8.615850e-47 |
| Msa0115810 | Msa0191250 | 0.830714 | 2.514343e-55 | -8.615850e-47 |
| Msa0115810 | Msa0195770 | 0.811273 | 7.602724e-51 | -8.615850e-47 |
| Msa0115810 | Msa0201070 | 0.804035 | 2.620733e-49 | -8.615850e-47 |
| Msa0115810 | Msa0205850 | 0.827214 | 1.770588e-54 | -8.615850e-47 |
| Msa0115810 | Msa0210450 | 0.812056 | 5.137714e-51 | -8.615850e-47 |
| Msa0115810 | Msa0215320 | -0.810787 | 9.689479e-51 | -8.615850e-47 |
| Msa0115810 | Msa0217400 | 0.831089 | 2.033811e-55 | -8.615850e-47 |
| Msa0115810 | Msa0219070 | 0.830149 | 3.455360e-55 | -8.615850e-47 |
| Msa0115810 | Msa0220580 | 0.821106 | 4.815118e-53 | -8.615850e-47 |
| Msa0115810 | Msa0223740 | 0.817275 | 3.588141e-52 | -8.615850e-47 |
| Msa0115810 | Msa0227470 | 0.801698 | 7.964553e-49 | -8.615850e-47 |
| Msa0115810 | Msa0233610 | 0.842888 | 1.963432e-58 | -8.615850e-47 |
| Msa0115810 | Msa0243100 | 0.806116 | 9.614265e-50 | -8.615850e-47 |
| Msa0115810 | Msa0243710 | 0.825265 | 5.150529e-54 | -8.615850e-47 |
| Msa0115810 | Msa0246430 | 0.835646 | 1.486691e-56 | -8.615850e-47 |
| Msa0115810 | Msa0248980 | 0.815369 | 9.574896e-52 | -8.615850e-47 |
| Msa0115810 | Msa0257250 | 0.807811 | 4.211738e-50 | -8.615850e-47 |
| Msa0115810 | Msa0258760 | 0.810821 | 9.524644e-51 | -8.615850e-47 |
| Msa0115810 | Msa0260810 | 0.845441 | 4.054623e-59 | -8.615850e-47 |
| Msa0115810 | Msa0264930 | 0.800144 | 1.654350e-48 | -8.615850e-47 |
| Msa0115810 | Msa0266000 | -0.847393 | 1.189979e-59 | -8.615850e-47 |
| Msa0115810 | Msa0269450 | 0.827463 | 1.543090e-54 | -8.615850e-47 |
| Msa0115810 | Msa0270100 | 0.818417 | 1.981352e-52 | -8.615850e-47 |
| Msa0115810 | Msa0275670 | 0.803464 | 3.442501e-49 | -8.615850e-47 |
| Msa0115810 | Msa0276920 | 0.835753 | 1.396364e-56 | -8.615850e-47 |
| Msa0115810 | Msa0282250 | 0.841422 | 4.797391e-58 | -8.615850e-47 |
| Msa0115810 | Msa0283520 | 0.801152 | 1.030504e-48 | -8.615850e-47 |
| Msa0115810 | Msa0285450 | 0.812505 | 4.098113e-51 | -8.615850e-47 |
| Msa0115810 | Msa0287310 | 0.811172 | 7.997627e-51 | -8.615850e-47 |
| Msa0115810 | Msa0287650 | 0.810856 | 9.362154e-51 | -8.615850e-47 |
| Msa0115810 | Msa0288100 | 0.837482 | 5.063812e-57 | -8.615850e-47 |
| Msa0115810 | Msa0296560 | 0.835977 | 1.225471e-56 | -8.615850e-47 |
| Msa0115810 | Msa0297960 | 0.804075 | 2.570390e-49 | -8.615850e-47 |
| Msa0115810 | Msa0311860 | 0.812808 | 3.518122e-51 | -8.615850e-47 |
| Msa0115810 | Msa0320100 | 0.829284 | 5.610193e-55 | -8.615850e-47 |
| Msa0115810 | Msa0323180 | 0.813413 | 2.592344e-51 | -8.615850e-47 |
| Msa0115810 | Msa0323620 | 0.804495 | 2.101358e-49 | -8.615850e-47 |
| Msa0115810 | Msa0325850 | 0.812891 | 3.373714e-51 | -8.615850e-47 |
| Msa0115810 | Msa0326520 | 0.812744 | 3.634486e-51 | -8.615850e-47 |
| Msa0115810 | Msa0332000 | 0.803142 | 4.014166e-49 | -8.615850e-47 |
| Msa0115810 | Msa0333720 | -0.848021 | 7.990020e-60 | -8.615850e-47 |
| Msa0115810 | Msa0334350 | 0.802815 | 4.690885e-49 | -8.615850e-47 |
| Msa0115810 | Msa0335040 | 0.846823 | 1.704681e-59 | -8.615850e-47 |
| Msa0115810 | Msa0336250 | 0.800261 | 1.565562e-48 | -8.615850e-47 |
| Msa0115810 | Msa0338110 | 0.810090 | 1.369955e-50 | -8.615850e-47 |
| Msa0115810 | Msa0342910 | 0.800720 | 1.262554e-48 | -8.615850e-47 |
| Msa0115810 | Msa0344870 | 0.805007 | 1.643572e-49 | -8.615850e-47 |
| Msa0115810 | Msa0350990 | 0.800755 | 1.241667e-48 | -8.615850e-47 |
| Msa0115810 | Msa0351810 | 0.817689 | 2.894086e-52 | -8.615850e-47 |
| Msa0115810 | Msa0356890 | -0.807470 | 4.976095e-50 | -8.615850e-47 |
| Msa0115810 | Msa0366240 | 0.806473 | 8.087218e-50 | -8.615850e-47 |
| Msa0115810 | Msa0372660 | 0.817282 | 3.575344e-52 | -8.615850e-47 |
| Msa0115810 | Msa0376590 | 0.812888 | 3.379320e-51 | -8.615850e-47 |
| Msa0115810 | Msa0377530 | 0.802059 | 6.712815e-49 | -8.615850e-47 |
| Msa0115810 | Msa0379640 | 0.807236 | 5.577252e-50 | -8.615850e-47 |
| Msa0115810 | Msa0388960 | 0.831416 | 1.690449e-55 | -8.615850e-47 |
| Msa0115810 | Msa0389340 | 0.815012 | 1.149836e-51 | -8.615850e-47 |
| Msa0115810 | Msa0395870 | 0.815529 | 8.821548e-52 | -8.615850e-47 |
| Msa0115810 | Msa0414950 | -0.803297 | 3.727750e-49 | -8.615850e-47 |
| Msa0115810 | Msa0415810 | 0.810517 | 1.108099e-50 | -8.615850e-47 |
| Msa0115810 | Msa0417270 | 0.819948 | 8.880830e-53 | -8.615850e-47 |
| Msa0115810 | Msa0419820 | 0.812231 | 4.705585e-51 | -8.615850e-47 |
| Msa0115810 | Msa0423360 | -0.803275 | 3.768260e-49 | -8.615850e-47 |
| Msa0115810 | Msa0424920 | 0.802404 | 5.700081e-49 | -8.615850e-47 |
| Msa0115810 | Msa0426330 | 0.807479 | 4.953354e-50 | -8.615850e-47 |
| Msa0115810 | Msa0426360 | 0.800720 | 1.262407e-48 | -8.615850e-47 |
| Msa0115810 | Msa0426900 | 0.806458 | 8.145922e-50 | -8.615850e-47 |
| Msa0115810 | Msa0431670 | 0.810955 | 8.910266e-51 | -8.615850e-47 |
| Msa0115810 | Msa0442850 | 0.804408 | 2.191766e-49 | -8.615850e-47 |
| Msa0115810 | Msa0444090 | 0.800350 | 1.502109e-48 | -8.615850e-47 |
| Msa0115810 | Msa0452310 | 0.804456 | 2.141228e-49 | -8.615850e-47 |
| Msa0115810 | Msa0452920 | 0.808274 | 3.356096e-50 | -8.615850e-47 |
| Msa0115810 | Msa0458310 | 0.817624 | 2.994899e-52 | -8.615850e-47 |
| Msa0115810 | Msa0458440 | 0.809340 | 1.985944e-50 | -8.615850e-47 |
| Msa0115810 | Msa0459770 | -0.800742 | 1.249550e-48 | -8.615850e-47 |
| Msa0115810 | Msa0464900 | 0.846619 | 1.938664e-59 | -8.615850e-47 |
| Msa0115810 | Msa0465680 | -0.809008 | 2.338974e-50 | -8.615850e-47 |
| Msa0115810 | Msa0467900 | -0.805627 | 1.218528e-49 | -8.615850e-47 |
| Msa0115810 | Msa0469290 | 0.814043 | 1.883533e-51 | -8.615850e-47 |
| Msa0115810 | Msa0473080 | 0.813683 | 2.260552e-51 | -8.615850e-47 |
| Msa0115810 | Msa0473240 | 0.831392 | 1.713645e-55 | -8.615850e-47 |
| Msa0115810 | Msa0480600 | 0.809441 | 1.889013e-50 | -8.615850e-47 |
| Msa0115810 | Msa0484780 | 0.862847 | 3.791900e-64 | -8.615850e-47 |
| Msa0115810 | Msa0490350 | 0.801502 | 8.735896e-49 | -8.615850e-47 |
| Msa0115810 | Msa0495320 | 0.804534 | 2.062889e-49 | -8.615850e-47 |
| Msa0115810 | Msa0506890 | 0.808871 | 2.502318e-50 | -8.615850e-47 |
| Msa0115810 | Msa0512900 | 0.821881 | 3.188951e-53 | -8.615850e-47 |
| Msa0115810 | Msa0515010 | 0.822800 | 1.951006e-53 | -8.615850e-47 |
| Msa0115810 | Msa0516370 | 0.808203 | 3.475374e-50 | -8.615850e-47 |
| Msa0115810 | Msa0517330 | 0.805953 | 1.040885e-49 | -8.615850e-47 |
| Msa0115810 | Msa0517490 | 0.802878 | 4.552676e-49 | -8.615850e-47 |
| Msa0115810 | Msa0524890 | -0.801243 | 9.872901e-49 | -8.615850e-47 |
| Msa0115810 | Msa0526890 | 0.820536 | 6.511388e-53 | -8.615850e-47 |
| Msa0115810 | Msa0534590 | 0.822277 | 2.582305e-53 | -8.615850e-47 |
| Msa0115810 | Msa0535030 | 0.805297 | 1.428720e-49 | -8.615850e-47 |
| Msa0115810 | Msa0535060 | 0.812314 | 4.513138e-51 | -8.615850e-47 |
| Msa0115810 | Msa0535450 | 0.800284 | 1.549018e-48 | -8.615850e-47 |
| Msa0115810 | Msa0562440 | 0.800353 | 1.499780e-48 | -8.615850e-47 |
| Msa0115810 | Msa0567020 | 0.802197 | 6.290245e-49 | -8.615850e-47 |
| Msa0115810 | Msa0568820 | 0.827921 | 1.197395e-54 | -8.615850e-47 |
| Msa0115810 | Msa0572420 | 0.820746 | 5.827751e-53 | -8.615850e-47 |
| Msa0115810 | Msa0575470 | 0.814643 | 1.387565e-51 | -8.615850e-47 |
| Msa0115810 | Msa0577220 | 0.800705 | 1.271292e-48 | -8.615850e-47 |
| Msa0115810 | Msa0581760 | 0.804463 | 2.134161e-49 | -8.615850e-47 |
| Msa0115810 | Msa0585230 | 0.807370 | 5.225463e-50 | -8.615850e-47 |
| Msa0115810 | Msa0590800 | 0.819293 | 1.253486e-52 | -8.615850e-47 |
| Msa0115810 | Msa0598460 | 0.817740 | 2.818573e-52 | -8.615850e-47 |
| Msa0115810 | Msa0599580 | 0.823796 | 1.142104e-53 | -8.615850e-47 |
| Msa0115810 | Msa0599890 | 0.813903 | 2.022017e-51 | -8.615850e-47 |
| Msa0115810 | Msa0603540 | 0.801865 | 7.359229e-49 | -8.615850e-47 |
| Msa0115810 | Msa0619070 | 0.814051 | 1.875485e-51 | -8.615850e-47 |
| Msa0115810 | Msa0621590 | 0.817602 | 3.028820e-52 | -8.615850e-47 |
| Msa0115810 | Msa0622650 | 0.800079 | 1.704858e-48 | -8.615850e-47 |
| Msa0115810 | Msa0631120 | 0.812565 | 3.976777e-51 | -8.615850e-47 |
| Msa0115810 | Msa0633840 | 0.819032 | 1.437220e-52 | -8.615850e-47 |
| Msa0115810 | Msa0637070 | 0.803073 | 4.149066e-49 | -8.615850e-47 |
| Msa0115810 | Msa0638070 | 0.808831 | 2.552858e-50 | -8.615850e-47 |
| Msa0115810 | Msa0638280 | 0.820902 | 5.366590e-53 | -8.615850e-47 |
| Msa0115810 | Msa0638320 | 0.825576 | 4.348714e-54 | -8.615850e-47 |
| Msa0115810 | Msa0644840 | 0.812036 | 5.188679e-51 | -8.615850e-47 |
| Msa0115810 | Msa0647450 | -0.805109 | 1.564760e-49 | -8.615850e-47 |
| Msa0115810 | Msa0657970 | 0.821700 | 3.511740e-53 | -8.615850e-47 |
| Msa0115810 | Msa0658570 | 0.817029 | 4.076043e-52 | -8.615850e-47 |
| Msa0115810 | Msa0662650 | 0.828255 | 9.951428e-55 | -8.615850e-47 |
| Msa0115810 | Msa0663240 | 0.804420 | 2.178654e-49 | -8.615850e-47 |
| Msa0115810 | Msa0672690 | 0.805508 | 1.290646e-49 | -8.615850e-47 |
| Msa0115810 | Msa0677270 | 0.823998 | 1.023941e-53 | -8.615850e-47 |
| Msa0115810 | Msa0682550 | 0.807743 | 4.354489e-50 | -8.615850e-47 |
| Msa0115810 | Msa0688070 | 0.807527 | 4.840193e-50 | -8.615850e-47 |
| Msa0115810 | Msa0688480 | 0.802812 | 4.697269e-49 | -8.615850e-47 |
| Msa0115810 | Msa0692230 | 0.816389 | 5.670319e-52 | -8.615850e-47 |
| Msa0115810 | Msa0693380 | 0.847955 | 8.332834e-60 | -8.615850e-47 |
| Msa0115810 | Msa0696640 | 0.850049 | 2.182570e-60 | -8.615850e-47 |
| Msa0115810 | Msa0703490 | 0.804524 | 2.072649e-49 | -8.615850e-47 |
| Msa0115810 | Msa0708860 | 0.827314 | 1.675026e-54 | -8.615850e-47 |
| Msa0115810 | Msa0715110 | 0.808018 | 3.804940e-50 | -8.615850e-47 |
| Msa0115810 | Msa0715470 | 0.803321 | 3.685327e-49 | -8.615850e-47 |
| Msa0115810 | Msa0724830 | 0.820319 | 7.304029e-53 | -8.615850e-47 |
| Msa0115810 | Msa0750350 | 0.832746 | 7.927286e-56 | -8.615850e-47 |
| Msa0115810 | Msa0754720 | -0.826704 | 2.344021e-54 | -8.615850e-47 |
| Msa0115810 | Msa0756630 | -0.822272 | 2.588677e-53 | -8.615850e-47 |
| Msa0115810 | Msa0765380 | 0.806709 | 7.212227e-50 | -8.615850e-47 |
| Msa0115810 | Msa0787260 | 0.807158 | 5.795535e-50 | -8.615850e-47 |
| Msa0115810 | Msa0788710 | 0.811155 | 8.063273e-51 | -8.615850e-47 |
| Msa0115810 | Msa0789570 | 0.809520 | 1.817112e-50 | -8.615850e-47 |
| Msa0115810 | Msa0790510 | 0.815337 | 9.733651e-52 | -8.615850e-47 |
| Msa0115810 | Msa0791070 | 0.810891 | 9.200545e-51 | -8.615850e-47 |
| Msa0115810 | Msa0824660 | 0.833067 | 6.598375e-56 | -8.615850e-47 |
| Msa0115810 | Msa0829620 | 0.825168 | 5.429929e-54 | -8.615850e-47 |
| Msa0115810 | Msa0835310 | 0.811694 | 6.157732e-51 | -8.615850e-47 |
| Msa0115810 | Msa0844240 | 0.825294 | 5.069372e-54 | -8.615850e-47 |
| Msa0115810 | Msa0855430 | 0.817511 | 3.175757e-52 | -8.615850e-47 |
| Msa0115810 | Msa0867890 | 0.832532 | 8.958110e-56 | -8.615850e-47 |
| Msa0115810 | Msa0870530 | 0.827961 | 1.171464e-54 | -8.615850e-47 |
| Msa0115810 | Msa0870620 | 0.805702 | 1.175244e-49 | -8.615850e-47 |
| Msa0115810 | Msa0871400 | 0.827138 | 1.846326e-54 | -8.615850e-47 |
| Msa0115810 | Msa0880140 | 0.815136 | 1.078716e-51 | -8.615850e-47 |
| Msa0115810 | Msa0881020 | 0.801965 | 7.019739e-49 | -8.615850e-47 |
| Msa0115810 | Msa0882510 | 0.804339 | 2.265088e-49 | -8.615850e-47 |
| Msa0115810 | Msa0891040 | 0.840192 | 1.008073e-57 | -8.615850e-47 |
| Msa0115810 | Msa0893810 | 0.821278 | 4.396061e-53 | -8.615850e-47 |
| Msa0115810 | Msa0898670 | 0.804662 | 1.939968e-49 | -8.615850e-47 |
| Msa0115810 | Msa0899230 | 0.815006 | 1.153253e-51 | -8.615850e-47 |
| Msa0115810 | Msa0903700 | 0.843202 | 1.619574e-58 | -8.615850e-47 |
| Msa0115810 | Msa0908050 | 0.804390 | 2.210136e-49 | -8.615850e-47 |
| Msa0115810 | Msa0908170 | 0.836944 | 6.951980e-57 | -8.615850e-47 |
| Msa0115810 | Msa0910980 | -0.840961 | 6.343845e-58 | -8.615850e-47 |
| Msa0115810 | Msa0922410 | 0.800554 | 1.365001e-48 | -8.615850e-47 |
| Msa0115810 | Msa0927670 | 0.813654 | 2.293977e-51 | -8.615850e-47 |
| Msa0115810 | Msa0931520 | 0.802846 | 4.621923e-49 | -8.615850e-47 |
| Msa0115810 | Msa0933230 | 0.831343 | 1.761250e-55 | -8.615850e-47 |
| Msa0115810 | Msa0933310 | 0.831726 | 1.417988e-55 | -8.615850e-47 |
| Msa0115810 | Msa0933440 | 0.803845 | 2.870566e-49 | -8.615850e-47 |
| Msa0115810 | Msa0936270 | 0.813660 | 2.287907e-51 | -8.615850e-47 |
| Msa0115810 | Msa0944770 | 0.804448 | 2.149380e-49 | -8.615850e-47 |
| Msa0115810 | Msa0954130 | 0.810819 | 9.536315e-51 | -8.615850e-47 |
| Msa0115810 | Msa0954550 | 0.822290 | 2.563720e-53 | -8.615850e-47 |
| Msa0115810 | Msa0960160 | 0.814018 | 1.907715e-51 | -8.615850e-47 |
| Msa0115810 | Msa0961420 | -0.810833 | 9.470074e-51 | -8.615850e-47 |
| Msa0115810 | Msa0965520 | 0.806184 | 9.304126e-50 | -8.615850e-47 |
| Msa0115810 | Msa0971090 | 0.825818 | 3.809378e-54 | -8.615850e-47 |
| Msa0115810 | Msa0973150 | 0.829102 | 6.212051e-55 | -8.615850e-47 |
| Msa0115810 | Msa0990960 | 0.813540 | 2.430191e-51 | -8.615850e-47 |
| Msa0115810 | Msa0993530 | 0.821161 | 4.677164e-53 | -8.615850e-47 |
| Msa0115810 | Msa0999040 | 0.812313 | 4.513874e-51 | -8.615850e-47 |
| Msa0115810 | Msa1000020 | 0.815639 | 8.339591e-52 | -8.615850e-47 |
| Msa0115810 | Msa1006850 | 0.813508 | 2.470295e-51 | -8.615850e-47 |
| Msa0115810 | Msa1027290 | 0.809640 | 1.712609e-50 | -8.615850e-47 |
| Msa0115810 | Msa1037700 | -0.823567 | 1.292340e-53 | -8.615850e-47 |
| Msa0115810 | Msa1039880 | 0.819358 | 1.211480e-52 | -8.615850e-47 |
| Msa0115810 | Msa1041730 | 0.816437 | 5.531470e-52 | -8.615850e-47 |
| Msa0115810 | Msa1043920 | 0.839340 | 1.680542e-57 | -8.615850e-47 |
| Msa0115810 | Msa1046300 | 0.810195 | 1.300433e-50 | -8.615850e-47 |
| Msa0115810 | Msa1073070 | -0.809786 | 1.592747e-50 | -8.615850e-47 |
| Msa0115810 | Msa1075220 | -0.818756 | 1.660037e-52 | -8.615850e-47 |
| Msa0115810 | Msa1080160 | 0.838288 | 3.143451e-57 | -8.615850e-47 |
| Msa0115810 | Msa1082500 | 0.855826 | 4.862105e-62 | -8.615850e-47 |
| Msa0115810 | Msa1085300 | 0.816126 | 6.492204e-52 | -8.615850e-47 |
| Msa0115810 | Msa1087470 | 0.835945 | 1.248272e-56 | -8.615850e-47 |
| Msa0115810 | Msa1091830 | 0.807190 | 5.703596e-50 | -8.615850e-47 |
| Msa0115810 | Msa1092090 | 0.801947 | 7.079320e-49 | -8.615850e-47 |
| Msa0115810 | Msa1098400 | 0.807419 | 5.102233e-50 | -8.615850e-47 |
| Msa0115810 | Msa1098560 | 0.803265 | 3.785661e-49 | -8.615850e-47 |
| Msa0115810 | Msa1100480 | 0.823873 | 1.095372e-53 | -8.615850e-47 |
| Msa0115810 | Msa1116130 | -0.817313 | 3.518679e-52 | -8.615850e-47 |
| Msa0115810 | Msa1124310 | 0.806275 | 8.903755e-50 | -8.615850e-47 |
| Msa0115810 | Msa1125080 | 0.830549 | 2.758384e-55 | -8.615850e-47 |
| Msa0115810 | Msa1130270 | -0.831920 | 1.269562e-55 | -8.615850e-47 |
| Msa0115810 | Msa1139000 | -0.806148 | 9.470339e-50 | -8.615850e-47 |
| Msa0115810 | Msa1145250 | -0.806746 | 7.080599e-50 | -8.615850e-47 |
| Msa0115810 | Msa1147900 | 0.808101 | 3.654945e-50 | -8.615850e-47 |
| Msa0115810 | Msa1151910 | 0.810198 | 1.298566e-50 | -8.615850e-47 |
| Msa0115810 | Msa1162550 | -0.843500 | 1.348470e-58 | -8.615850e-47 |
| Msa0115810 | Msa1167220 | 0.816676 | 4.892362e-52 | -8.615850e-47 |
| Msa0115810 | Msa1170730 | 0.804569 | 2.028372e-49 | -8.615850e-47 |
| Msa0115810 | Msa1172670 | 0.846733 | 1.804262e-59 | -8.615850e-47 |
| Msa0115810 | Msa1179460 | 0.800640 | 1.310660e-48 | -8.615850e-47 |
| Msa0115810 | Msa1181550 | 0.802832 | 4.652740e-49 | -8.615850e-47 |
| Msa0115810 | Msa1197590 | 0.823495 | 1.342955e-53 | -8.615850e-47 |
| Msa0115810 | Msa1199560 | 0.805876 | 1.080416e-49 | -8.615850e-47 |
| Msa0115810 | Msa1214880 | 0.814751 | 1.313417e-51 | -8.615850e-47 |
| Msa0115810 | Msa1214890 | 0.800086 | 1.699840e-48 | -8.615850e-47 |
| Msa0115810 | Msa1217810 | 0.804607 | 1.991764e-49 | -8.615850e-47 |
| Msa0115810 | Msa1217860 | 0.816776 | 4.645862e-52 | -8.615850e-47 |
| Msa0115810 | Msa1224480 | 0.807121 | 5.901476e-50 | -8.615850e-47 |
| Msa0115810 | Msa1233500 | 0.871000 | 9.533091e-67 | -8.615850e-47 |
| Msa0115810 | Msa1233890 | 0.825577 | 4.344983e-54 | -8.615850e-47 |
| Msa0115810 | Msa1238930 | 0.823038 | 1.717249e-53 | -8.615850e-47 |
| Msa0115810 | Msa1247250 | 0.801787 | 7.637255e-49 | -8.615850e-47 |
| Msa0115810 | Msa1264020 | 0.811537 | 6.661890e-51 | -8.615850e-47 |
| Msa0115810 | Msa1275770 | 0.803086 | 4.122399e-49 | -8.615850e-47 |
| Msa0115810 | Msa1276440 | 0.813612 | 2.344061e-51 | -8.615850e-47 |
| Msa0115810 | Msa1283860 | 0.827448 | 1.555613e-54 | -8.615850e-47 |
| Msa0115810 | Msa1288340 | 0.803651 | 3.149058e-49 | -8.615850e-47 |
| Msa0115810 | Msa1288420 | 0.801554 | 8.525591e-49 | -8.615850e-47 |
| Msa0115810 | Msa1296940 | 0.801756 | 7.748893e-49 | -8.615850e-47 |
| Msa0115810 | Msa1297290 | 0.802532 | 5.366182e-49 | -8.615850e-47 |
| Msa0115810 | Msa1299070 | 0.809922 | 1.488916e-50 | -8.615850e-47 |
| Msa0115810 | Msa1305340 | 0.805574 | 1.249814e-49 | -8.615850e-47 |
| Msa0115810 | Msa1308380 | 0.801665 | 8.089705e-49 | -8.615850e-47 |
| Msa0115810 | Msa1308590 | 0.815321 | 9.815966e-52 | -8.615850e-47 |
| Msa0115810 | Msa1308640 | 0.801648 | 8.153754e-49 | -8.615850e-47 |
| Msa0115810 | Msa1313150 | 0.828991 | 6.607998e-55 | -8.615850e-47 |
| Msa0115810 | Msa1314340 | 0.820333 | 7.251579e-53 | -8.615850e-47 |
| Msa0115810 | Msa1316830 | 0.804883 | 1.743859e-49 | -8.615850e-47 |
| Msa0115810 | Msa1319650 | 0.802413 | 5.677821e-49 | -8.615850e-47 |
| Msa0115810 | Msa1320620 | 0.804701 | 1.903724e-49 | -8.615850e-47 |
| Msa0115810 | Msa1320740 | 0.817306 | 3.531331e-52 | -8.615850e-47 |
| Msa0115810 | Msa1322190 | 0.811715 | 6.095658e-51 | -8.615850e-47 |
| Msa0115810 | Msa1322890 | 0.811231 | 7.762536e-51 | -8.615850e-47 |
| Msa0115810 | Msa1328700 | 0.810716 | 1.003905e-50 | -8.615850e-47 |
| Msa0115810 | Msa1329700 | 0.803120 | 4.055875e-49 | -8.615850e-47 |
| Msa0115810 | Msa1331910 | 0.805593 | 1.238340e-49 | -8.615850e-47 |
| Msa0115810 | Msa1331920 | 0.821138 | 4.733768e-53 | -8.615850e-47 |
| Msa0115810 | Msa1333410 | 0.805322 | 1.411744e-49 | -8.615850e-47 |
| Msa0115810 | Msa1340650 | 0.836927 | 7.022205e-57 | -8.615850e-47 |
| Msa0115810 | Msa1342430 | 0.800325 | 1.519542e-48 | -8.615850e-47 |
| Msa0115810 | Msa1359040 | 0.805562 | 1.257010e-49 | -8.615850e-47 |
| Msa0115810 | Msa1376890 | 0.819134 | 1.362162e-52 | -8.615850e-47 |
| Msa0115810 | Msa1384350 | 0.814989 | 1.163280e-51 | -8.615850e-47 |
| Msa0115810 | Msa1385000 | 0.805581 | 1.245520e-49 | -8.615850e-47 |
| Msa0115810 | Msa1385670 | 0.803423 | 3.511442e-49 | -8.615850e-47 |
| Msa0115810 | Msa1390050 | 0.807527 | 4.840066e-50 | -8.615850e-47 |
| Msa0115810 | Msa1392260 | 0.800474 | 1.416861e-48 | -8.615850e-47 |
| Msa0115810 | Msa1393040 | 0.805254 | 1.458799e-49 | -8.615850e-47 |
| Msa0115810 | Msa1404540 | 0.842398 | 2.649233e-58 | -8.615850e-47 |
| Msa0115810 | Msa1404670 | 0.810259 | 1.260167e-50 | -8.615850e-47 |
| Msa0115810 | Msa1408790 | 0.838145 | 3.421575e-57 | -8.615850e-47 |
| Msa0115810 | Msa1410210 | 0.809703 | 1.659996e-50 | -8.615850e-47 |
| Msa0115810 | Msa1411020 | 0.801879 | 7.309977e-49 | -8.615850e-47 |
| Msa0115810 | Msa1414740 | 0.865606 | 5.226745e-65 | -8.615850e-47 |
| Msa0115810 | Msa1415940 | 0.801459 | 8.916897e-49 | -8.615850e-47 |
| Msa0115810 | Msa1416390 | 0.802613 | 5.163137e-49 | -8.615850e-47 |
| Msa0115810 | Msa1420140 | 0.816598 | 5.092532e-52 | -8.615850e-47 |
| Msa0115810 | Msa1423450 | 0.808966 | 2.388284e-50 | -8.615850e-47 |
| Msa0115810 | Msa1423880 | 0.833772 | 4.400682e-56 | -8.615850e-47 |
| Msa0115810 | Msa1425100 | 0.817487 | 3.215038e-52 | -8.615850e-47 |
| Msa0115810 | Msa1427760 | 0.808272 | 3.359552e-50 | -8.615850e-47 |
| Msa0115810 | Msa1431060 | 0.834949 | 2.230013e-56 | -8.615850e-47 |
| Msa0115810 | Msa1436040 | 0.836141 | 1.113275e-56 | -8.615850e-47 |
| Msa0115810 | Msa1439960 | 0.808461 | 3.061892e-50 | -8.615850e-47 |
| Msa0115810 | Msa1440600 | 0.819025 | 1.441879e-52 | -8.615850e-47 |
| Msa0115810 | Msa1451620 | -0.813290 | 2.758486e-51 | -8.615850e-47 |
| Msa0115810 | Msa1452120 | 0.806229 | 9.104173e-50 | -8.615850e-47 |
| Msa0115810 | Msa1454120 | 0.802399 | 5.713679e-49 | -8.615850e-47 |
| Msa0115810 | Msa1455390 | 0.809493 | 1.841641e-50 | -8.615850e-47 |
| Msa0115810 | Msa1457430 | 0.809603 | 1.743585e-50 | -8.615850e-47 |
| Msa0115810 | Msa1458550 | 0.805960 | 1.037003e-49 | -8.615850e-47 |
| Msa0115810 | Msa1460890 | 0.807845 | 4.141671e-50 | -8.615850e-47 |
| Msa0115810 | Msa1463670 | 0.825090 | 5.665664e-54 | -8.615850e-47 |
| Msa0115810 | Msa1464940 | 0.809191 | 2.137365e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115810 | MtrunA17_Chr1g0212051 | 94.222 | 225 | 10 | 2 | 12 | 233 | 14 | 238 | 4.65e-154 | 427 |
| Msa0115810 | MtrunA17_Chr5g0401321 | 94.222 | 225 | 10 | 2 | 12 | 233 | 14 | 238 | 8.40e-154 | 426 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115810 | AT1G01290.2 | 58.712 | 264 | 71 | 8 | 1 | 230 | 9 | 268 | 9.16e-90 | 266 |
| Msa0115810 | AT1G01290.1 | 58.712 | 264 | 71 | 8 | 1 | 230 | 9 | 268 | 9.16e-90 | 266 |
Find 60 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGGGTGCATCAATATT+TGG | 0.107907 | 1_3:-34717952 | Msa0115810:three_prime_UTR |
| CCTCATATAGTCTTTGAATA+TGG | 0.183936 | 1_3:-34717968 | Msa0115810:three_prime_UTR |
| CACAGTGTGTTCTTAGAAAT+TGG | 0.203322 | 1_3:+34718003 | None:intergenic |
| CAGGAAATGGAATCTGTATT+TGG | 0.204645 | 1_3:-34718613 | Msa0115810:CDS |
| GTTCTCTTGCTACTTTCTTT+TGG | 0.215531 | 1_3:+34718445 | None:intergenic |
| AGTTTACCTTATTGAGTTCT+TGG | 0.229145 | 1_3:+34720742 | None:intergenic |
| TTGACTCATACTGGAAATTC+AGG | 0.267783 | 1_3:-34718493 | Msa0115810:CDS |
| TTAATTTAACAAAGTATTGT+AGG | 0.312901 | 1_3:+34717884 | None:intergenic |
| GCTGTTTGCAAAGTAAATCT+TGG | 0.336888 | 1_3:-34718415 | Msa0115810:CDS |
| AGGAAATGGAATCTGTATTT+GGG | 0.339342 | 1_3:-34718612 | Msa0115810:CDS |
| ATTACTCCTGGAAACAATAA+TGG | 0.339691 | 1_3:-34718042 | Msa0115810:exon |
| GACTTCAGTGTAACAATAGA+AGG | 0.351874 | 1_3:-34718223 | Msa0115810:CDS |
| TCAAAACCATTATTGTTTCC+AGG | 0.353708 | 1_3:+34718036 | None:intergenic |
| TGGAAAGAAGGTGTTTGATT+TGG | 0.355147 | 1_3:-34718395 | Msa0115810:CDS |
| TTAGCCAATCAAATGGAAAA+AGG | 0.360550 | 1_3:-34718370 | Msa0115810:CDS |
| TTCAATCCAAGAACTCAATA+AGG | 0.367737 | 1_3:-34720748 | Msa0115810:intron |
| CTTACGGTTGCGAAAATTGC+CGG | 0.375291 | 1_3:-34718340 | Msa0115810:CDS |
| CTGCATCTCCTCAATCAAAA+AGG | 0.375864 | 1_3:-34720812 | Msa0115810:CDS |
| TGAATTGAAAATTACTCAAC+TGG | 0.383032 | 1_3:+34720930 | None:intergenic |
| ATATGGGTGCATCAATATTT+GGG | 0.396949 | 1_3:-34717951 | Msa0115810:three_prime_UTR |
| AATCCACTTGCACGTGTGTA+AGG | 0.416239 | 1_3:+34718263 | None:intergenic |
| CTCATATAGTCTTTGAATAT+GGG | 0.419951 | 1_3:-34717967 | Msa0115810:three_prime_UTR |
| ATTAGACTTAAGCATAAATC+TGG | 0.421153 | 1_3:-34718079 | Msa0115810:CDS |
| TGTTATGGCACAATGGAATC+AGG | 0.423838 | 1_3:+34718290 | None:intergenic |
| ATGACAGCAGTGTCTATTGC+TGG | 0.424673 | 1_3:-34718157 | Msa0115810:CDS |
| GAAGGGGAAGCTGCTTCAAC+CGG | 0.424889 | 1_3:-34718205 | Msa0115810:CDS |
| CAAAGTAAATCTTGGAAAGA+AGG | 0.428041 | 1_3:-34718407 | Msa0115810:CDS |
| TTTGGTATTAGCCAATCAAA+TGG | 0.445523 | 1_3:-34718377 | Msa0115810:CDS |
| AAATTCAGGGGAAGCTCAAA+TGG | 0.480022 | 1_3:-34718479 | Msa0115810:CDS |
| ATGTGCAAAGCTGCTTCAAA+AGG | 0.492586 | 1_3:-34718118 | Msa0115810:CDS |
| CCATATTCAAAGACTATATG+AGG | 0.499993 | 1_3:+34717968 | None:intergenic |
| TACTTAAGAAATTCTTCTGA+AGG | 0.508913 | 1_3:+34717781 | None:intergenic |
| GTCTATGATGCAATTTGAGT+GGG | 0.511560 | 1_3:+34720887 | None:intergenic |
| CATAGACAACGACAAGAGAA+AGG | 0.516922 | 1_3:-34720871 | Msa0115810:five_prime_UTR |
| CATTGCTTCCATCTCAACCC+CGG | 0.540442 | 1_3:+34718177 | None:intergenic |
| GTCATGAATAACAGAAGAAG+AGG | 0.542322 | 1_3:+34720779 | None:intergenic |
| ATTCCATTGTGCCATAACAT+AGG | 0.562881 | 1_3:-34718286 | Msa0115810:CDS |
| GTGTGTTCTTAGAAATTGGA+AGG | 0.564925 | 1_3:+34718007 | None:intergenic |
| GACACATGAGGTTCATTCGC+AGG | 0.569067 | 1_3:+34718547 | None:intergenic |
| ATAGACAACGACAAGAGAAA+GGG | 0.569586 | 1_3:-34720870 | Msa0115810:five_prime_UTR |
| TTTGGGGACTTTCCGCCAGA+CGG | 0.570296 | 1_3:-34718595 | Msa0115810:CDS |
| ACAGAGCTAAGTAGTCCGTC+TGG | 0.573316 | 1_3:+34718580 | None:intergenic |
| TAAAATGCTGAGTTAAAACT+AGG | 0.575143 | 1_3:+34717804 | None:intergenic |
| ACTTCAGTGTAACAATAGAA+GGG | 0.575457 | 1_3:-34718222 | Msa0115810:CDS |
| AGGCCTTACACACGTGCAAG+TGG | 0.575488 | 1_3:-34718266 | Msa0115810:CDS |
| CGTGTGTAAGGCCTATGTTA+TGG | 0.577316 | 1_3:+34718275 | None:intergenic |
| CATGTGTCATCTCGAAACAT+AGG | 0.582301 | 1_3:-34718532 | Msa0115810:CDS |
| CATGTTTGTTCGAAGAATTG+TGG | 0.583411 | 1_3:-34720841 | Msa0115810:CDS |
| TGACTCATACTGGAAATTCA+GGG | 0.590004 | 1_3:-34718492 | Msa0115810:CDS |
| TGTCTATGATGCAATTTGAG+TGG | 0.597119 | 1_3:+34720886 | None:intergenic |
| AGACTTAAGCATAAATCTGG+TGG | 0.599754 | 1_3:-34718076 | Msa0115810:CDS |
| ATTTACTTTGCAAACAGCAG+TGG | 0.619074 | 1_3:+34718420 | None:intergenic |
| CTTCAGTGTAACAATAGAAG+GGG | 0.630495 | 1_3:-34718221 | Msa0115810:CDS |
| GGAAATGGAATCTGTATTTG+GGG | 0.639864 | 1_3:-34718611 | Msa0115810:CDS |
| GACTCATACTGGAAATTCAG+GGG | 0.640275 | 1_3:-34718491 | Msa0115810:CDS |
| GGATTTGAGATTGAATCATG+AGG | 0.642472 | 1_3:-34718245 | Msa0115810:CDS |
| AGGCCTATGTTATGGCACAA+TGG | 0.661858 | 1_3:+34718283 | None:intergenic |
| TATTCAAAGACTATATGAGG+AGG | 0.664485 | 1_3:+34717971 | None:intergenic |
| GAGCTAAGTAGTCCGTCTGG+CGG | 0.683671 | 1_3:+34718583 | None:intergenic |
| ATGTTTCGAGATGACACATG+AGG | 0.689895 | 1_3:+34718535 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTGTTAAATTAATTTT+AGG | - | chr1_3:34720819-34720838 | Msa0115810:CDS | 10.0% |
| !!! | AATTAATTTTAGGTAAATTA+TGG | - | chr1_3:34720829-34720848 | Msa0115810:CDS | 10.0% |
| !! | ATGAAGGATTAAAAAAAAAA+AGG | - | chr1_3:34719193-34719212 | Msa0115810:intron | 15.0% |
| !! | TGAAGGATTAAAAAAAAAAA+GGG | - | chr1_3:34719194-34719213 | Msa0115810:intron | 15.0% |
| !!! | TTAATTTAACAAAGTATTGT+AGG | + | chr1_3:34720815-34720834 | None:intergenic | 15.0% |
| !!! | TAATTTTCAATTCAACAGAA+AGG | - | chr1_3:34717775-34717794 | Msa0115810:three_prime_UTR | 20.0% |
| !!! | ATTTTTGCAGAAATAACTTA+TGG | + | chr1_3:34718066-34718085 | None:intergenic | 20.0% |
| !!! | GTTATTTCTGCAAAAATAAA+CGG | - | chr1_3:34718069-34718088 | Msa0115810:CDS | 20.0% |
| !! | AGCAAAAAGAAGAAATAAAA+AGG | - | chr1_3:34719120-34719139 | Msa0115810:intron | 20.0% |
| !! | GCAAAAAGAAGAAATAAAAA+GGG | - | chr1_3:34719121-34719140 | Msa0115810:intron | 20.0% |
| !!! | TTAATCCTTCATTTTTGAAA+CGG | + | chr1_3:34719185-34719204 | None:intergenic | 20.0% |
| !! | ATATATAAGAAGAACAAACA+AGG | + | chr1_3:34719639-34719658 | None:intergenic | 20.0% |
| !!! | GATTAAGTTATTTGAGTTTA+TGG | + | chr1_3:34719782-34719801 | None:intergenic | 20.0% |
| !! | ATAGAAATCACACATAAATT+TGG | + | chr1_3:34719984-34720003 | None:intergenic | 20.0% |
| ! | TGAATTGAAAATTACTCAAC+TGG | + | chr1_3:34717769-34717788 | None:intergenic | 25.0% |
| ! | CAAAGAAAAGATAAGAAAGA+AGG | + | chr1_3:34717980-34717999 | None:intergenic | 25.0% |
| ! | TTGATATTATTGTTCAAACG+AGG | + | chr1_3:34718461-34718480 | None:intergenic | 25.0% |
| ! | AAGTTAATGTTGTCAAACAA+TGG | + | chr1_3:34718696-34718715 | None:intergenic | 25.0% |
| ! | AGAACTTAAAGGCAAATATT+AGG | + | chr1_3:34718794-34718813 | None:intergenic | 25.0% |
| ! | AATTGTTAACAAAGTGATCA+AGG | + | chr1_3:34718869-34718888 | None:intergenic | 25.0% |
| ! | AAATAAAAAGGGAACTTAGT+GGG | - | chr1_3:34719132-34719151 | Msa0115810:intron | 25.0% |
| ! | TATCACGTTGAAAATTAAGT+AGG | - | chr1_3:34719413-34719432 | Msa0115810:intron | 25.0% |
| ! | ATCACGTTGAAAATTAAGTA+GGG | - | chr1_3:34719414-34719433 | Msa0115810:intron | 25.0% |
| !!! | ATATTCTTCGGGTTTTTTTT+GGG | - | chr1_3:34719575-34719594 | Msa0115810:intron | 25.0% |
| ! | CTACTTATGAAAATGTCATA+AGG | - | chr1_3:34719714-34719733 | Msa0115810:intron | 25.0% |
| ! | GATTTATGATAGATATGCTA+GGG | + | chr1_3:34719876-34719895 | None:intergenic | 25.0% |
| ! | TTAGTAATATTGCATTAAGC+AGG | - | chr1_3:34719936-34719955 | Msa0115810:intron | 25.0% |
| ! | TAGTAATATTGCATTAAGCA+GGG | - | chr1_3:34719937-34719956 | Msa0115810:intron | 25.0% |
| ! | ATTAGACTTAAGCATAAATC+TGG | - | chr1_3:34720617-34720636 | Msa0115810:intron | 25.0% |
| ! | CTCATATAGTCTTTGAATAT+GGG | - | chr1_3:34720729-34720748 | Msa0115810:intron | 25.0% |
| ! | TAAAATGCTGAGTTAAAACT+AGG | + | chr1_3:34720895-34720914 | None:intergenic | 25.0% |
| ! | TACTTAAGAAATTCTTCTGA+AGG | + | chr1_3:34720918-34720937 | None:intergenic | 25.0% |
| TTCAATCCAAGAACTCAATA+AGG | - | chr1_3:34717948-34717967 | Msa0115810:three_prime_UTR | 30.0% | |
| AGTTTACCTTATTGAGTTCT+TGG | + | chr1_3:34717957-34717976 | None:intergenic | 30.0% | |
| !! | TTTTCTTTGTTCTGCTACTT+AGG | - | chr1_3:34717991-34718010 | Msa0115810:three_prime_UTR | 30.0% |
| ! | ATGATGCGTCTTTTATGTTT+AGG | - | chr1_3:34718017-34718036 | Msa0115810:three_prime_UTR | 30.0% |
| ! | TGATGCGTCTTTTATGTTTA+GGG | - | chr1_3:34718018-34718037 | Msa0115810:three_prime_UTR | 30.0% |
| ACTATAACACTATAGCATAG+CGG | + | chr1_3:34718239-34718258 | None:intergenic | 30.0% | |
| ATACGCTATTTAGTACACAA+TGG | + | chr1_3:34718285-34718304 | None:intergenic | 30.0% | |
| ! | TGTTCATATAGTCTTGAACA+TGG | + | chr1_3:34718432-34718451 | None:intergenic | 30.0% |
| TTTGAACAAACCACTATTTC+TGG | + | chr1_3:34718528-34718547 | None:intergenic | 30.0% | |
| GGAAATCGTTCAAAGAATTT+AGG | + | chr1_3:34718773-34718792 | None:intergenic | 30.0% | |
| AAACAGCTCAAAGAACTTAA+AGG | + | chr1_3:34718805-34718824 | None:intergenic | 30.0% | |
| TGTGTTGAAAGGTTTCATTT+GGG | + | chr1_3:34718842-34718861 | None:intergenic | 30.0% | |
| TTGTGTTGAAAGGTTTCATT+TGG | + | chr1_3:34718843-34718862 | None:intergenic | 30.0% | |
| GAAATAAAAAGGGAACTTAG+TGG | - | chr1_3:34719131-34719150 | Msa0115810:intron | 30.0% | |
| ACTAACCGTTTCAAAAATGA+AGG | - | chr1_3:34719177-34719196 | Msa0115810:intron | 30.0% | |
| TCACGTTGAAAATTAAGTAG+GGG | - | chr1_3:34719415-34719434 | Msa0115810:intron | 30.0% | |
| GGTTGTGTTTGGTTAAAAAT+TGG | - | chr1_3:34719440-34719459 | Msa0115810:intron | 30.0% | |
| TGTTTGGTTAAAAATTGGAG+AGG | - | chr1_3:34719445-34719464 | Msa0115810:intron | 30.0% | |
| GTTTGGTTAAAAATTGGAGA+GGG | - | chr1_3:34719446-34719465 | Msa0115810:intron | 30.0% | |
| ATCTGTGATTCCATATTCTT+CGG | - | chr1_3:34719563-34719582 | Msa0115810:intron | 30.0% | |
| CAAAAAAAACCCGAAGAATA+TGG | + | chr1_3:34719576-34719595 | None:intergenic | 30.0% | |
| !!! | CATATTCTTCGGGTTTTTTT+TGG | - | chr1_3:34719574-34719593 | Msa0115810:intron | 30.0% |
| AAGAAGAACAAACAAGGTTT+CGG | + | chr1_3:34719633-34719652 | None:intergenic | 30.0% | |
| GTATTTATTCAGGGATTGTT+GGG | + | chr1_3:34719804-34719823 | None:intergenic | 30.0% | |
| AGTATTTATTCAGGGATTGT+TGG | + | chr1_3:34719805-34719824 | None:intergenic | 30.0% | |
| GCTAGAGTAGTATTTATTCA+GGG | + | chr1_3:34719813-34719832 | None:intergenic | 30.0% | |
| TGCTAGAGTAGTATTTATTC+AGG | + | chr1_3:34719814-34719833 | None:intergenic | 30.0% | |
| GGATTTATGATAGATATGCT+AGG | + | chr1_3:34719877-34719896 | None:intergenic | 30.0% | |
| AGTAATATTGCATTAAGCAG+GGG | - | chr1_3:34719938-34719957 | Msa0115810:intron | 30.0% | |
| AGGAAATGGAATCTGTATTT+GGG | - | chr1_3:34720084-34720103 | Msa0115810:intron | 30.0% | |
| !! | TCTTTTGAATTGACTCATAC+TGG | - | chr1_3:34720194-34720213 | Msa0115810:intron | 30.0% |
| CAAAGTAAATCTTGGAAAGA+AGG | - | chr1_3:34720289-34720308 | Msa0115810:intron | 30.0% | |
| TTTGGTATTAGCCAATCAAA+TGG | - | chr1_3:34720319-34720338 | Msa0115810:intron | 30.0% | |
| TTAGCCAATCAAATGGAAAA+AGG | - | chr1_3:34720326-34720345 | Msa0115810:intron | 30.0% | |
| ACTTCAGTGTAACAATAGAA+GGG | - | chr1_3:34720474-34720493 | Msa0115810:intron | 30.0% | |
| ATAAATCTGGTGGAAAAAGT+GGG | - | chr1_3:34720630-34720649 | Msa0115810:intron | 30.0% | |
| ATTACTCCTGGAAACAATAA+TGG | - | chr1_3:34720654-34720673 | Msa0115810:intron | 30.0% | |
| TCAAAACCATTATTGTTTCC+AGG | + | chr1_3:34720663-34720682 | None:intergenic | 30.0% | |
| TATTCAAAGACTATATGAGG+AGG | + | chr1_3:34720728-34720747 | None:intergenic | 30.0% | |
| CCATATTCAAAGACTATATG+AGG | + | chr1_3:34720731-34720750 | None:intergenic | 30.0% | |
| CCTCATATAGTCTTTGAATA+TGG | - | chr1_3:34720728-34720747 | Msa0115810:intron | 30.0% | |
| AATATGGGTGCATCAATATT+TGG | - | chr1_3:34720744-34720763 | Msa0115810:intron | 30.0% | |
| ATATGGGTGCATCAATATTT+GGG | - | chr1_3:34720745-34720764 | Msa0115810:intron | 30.0% | |
| GTCTATGATGCAATTTGAGT+GGG | + | chr1_3:34717812-34717831 | None:intergenic | 35.0% | |
| TGTCTATGATGCAATTTGAG+TGG | + | chr1_3:34717813-34717832 | None:intergenic | 35.0% | |
| ATAGACAACGACAAGAGAAA+GGG | - | chr1_3:34717826-34717845 | Msa0115810:three_prime_UTR | 35.0% | |
| CATGTTTGTTCGAAGAATTG+TGG | - | chr1_3:34717855-34717874 | Msa0115810:three_prime_UTR | 35.0% | |
| !! | CAGAAGATCCTTTTTGATTG+AGG | + | chr1_3:34717895-34717914 | None:intergenic | 35.0% |
| GTCATGAATAACAGAAGAAG+AGG | + | chr1_3:34717920-34717939 | None:intergenic | 35.0% | |
| GTGTGAAATAGAAGCTATAG+CGG | + | chr1_3:34718263-34718282 | None:intergenic | 35.0% | |
| GTGTACTAAATAGCGTATTG+CGG | - | chr1_3:34718287-34718306 | Msa0115810:CDS | 35.0% | |
| AAACGAGGTGACAATGTAAT+AGG | - | chr1_3:34718344-34718363 | Msa0115810:CDS | 35.0% | |
| ATGTAATAGGAGACGATCAA+AGG | - | chr1_3:34718357-34718376 | Msa0115810:CDS | 35.0% | |
| AACATGGCTGCATCAATATT+GGG | + | chr1_3:34718416-34718435 | None:intergenic | 35.0% | |
| TCCACCAATATTGTTAACTG+TGG | - | chr1_3:34718498-34718517 | Msa0115810:CDS | 35.0% | |
| TCCACAGTTAACAATATTGG+TGG | + | chr1_3:34718502-34718521 | None:intergenic | 35.0% | |
| CGATCCACAGTTAACAATAT+TGG | + | chr1_3:34718505-34718524 | None:intergenic | 35.0% | |
| ACTATAGAACTGTAGCATAG+TGG | + | chr1_3:34718553-34718572 | None:intergenic | 35.0% | |
| ACACCACTGTGTACTAAATT+GGG | - | chr1_3:34718625-34718644 | Msa0115810:intron | 35.0% | |
| ATACCCAATTTAGTACACAG+TGG | + | chr1_3:34718631-34718650 | None:intergenic | 35.0% | |
| ! | GTGTACTAAATTGGGTATTG+CGG | - | chr1_3:34718633-34718652 | Msa0115810:intron | 35.0% |
| !! | CACAGTTCTAAGAACTTTAG+AGG | + | chr1_3:34718729-34718748 | None:intergenic | 35.0% |
| !! | CTCTAAAGTTCTTAGAACTG+TGG | - | chr1_3:34718727-34718746 | Msa0115810:intron | 35.0% |
| ATCAAGGAGATTGTGTTGAA+AGG | + | chr1_3:34718853-34718872 | None:intergenic | 35.0% | |
| CATGACAATGAAACACATGA+TGG | + | chr1_3:34719016-34719035 | None:intergenic | 35.0% | |
| TGTACAATACACCGAATAGT+GGG | + | chr1_3:34719268-34719287 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr1_3:34719294-34719313 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr1_3:34719293-34719312 | Msa0115810:intron | 35.0% |
| ATGTCACGATTTATTGTGTG+TGG | - | chr1_3:34719344-34719363 | Msa0115810:intron | 35.0% | |
| GTTGAAAATTAAGTAGGGGA+TGG | - | chr1_3:34719419-34719438 | Msa0115810:intron | 35.0% | |
| !! | TGACATTTTAACAAACCTCG+AGG | - | chr1_3:34719475-34719494 | Msa0115810:intron | 35.0% |
| !! | GACATTTTAACAAACCTCGA+GGG | - | chr1_3:34719476-34719495 | Msa0115810:intron | 35.0% |
| TCTGTGATTCCATATTCTTC+GGG | - | chr1_3:34719564-34719583 | Msa0115810:intron | 35.0% | |
| ATAAATCCATTCACATGCCT+AGG | - | chr1_3:34719889-34719908 | Msa0115810:intron | 35.0% | |
| GTAATATTGCATTAAGCAGG+GGG | - | chr1_3:34719939-34719958 | Msa0115810:intron | 35.0% | |
| ACGGAATAAGCAATTTAGCA+TGG | + | chr1_3:34720061-34720080 | None:intergenic | 35.0% | |
| TAAATTGCTTATTCCGTCTC+AGG | - | chr1_3:34720064-34720083 | Msa0115810:intron | 35.0% | |
| CAGGAAATGGAATCTGTATT+TGG | - | chr1_3:34720083-34720102 | Msa0115810:intron | 35.0% | |
| GGAAATGGAATCTGTATTTG+GGG | - | chr1_3:34720085-34720104 | Msa0115810:intron | 35.0% | |
| TTGACTCATACTGGAAATTC+AGG | - | chr1_3:34720203-34720222 | Msa0115810:intron | 35.0% | |
| TGACTCATACTGGAAATTCA+GGG | - | chr1_3:34720204-34720223 | Msa0115810:intron | 35.0% | |
| !!! | GTTCTCTTGCTACTTTCTTT+TGG | + | chr1_3:34720254-34720273 | None:intergenic | 35.0% |
| ATTTACTTTGCAAACAGCAG+TGG | + | chr1_3:34720279-34720298 | None:intergenic | 35.0% | |
| GCTGTTTGCAAAGTAAATCT+TGG | - | chr1_3:34720281-34720300 | Msa0115810:intron | 35.0% | |
| !! | TGGAAAGAAGGTGTTTGATT+TGG | - | chr1_3:34720301-34720320 | Msa0115810:intron | 35.0% |
| ! | GTCTCCTTTTTCCATTTGAT+TGG | + | chr1_3:34720333-34720352 | None:intergenic | 35.0% |
| ATTCCATTGTGCCATAACAT+AGG | - | chr1_3:34720410-34720429 | Msa0115810:intron | 35.0% | |
| ! | GGATTTGAGATTGAATCATG+AGG | - | chr1_3:34720451-34720470 | Msa0115810:intron | 35.0% |
| GACTTCAGTGTAACAATAGA+AGG | - | chr1_3:34720473-34720492 | Msa0115810:intron | 35.0% | |
| CTTCAGTGTAACAATAGAAG+GGG | - | chr1_3:34720475-34720494 | Msa0115810:intron | 35.0% | |
| AGACTTAAGCATAAATCTGG+TGG | - | chr1_3:34720620-34720639 | Msa0115810:intron | 35.0% | |
| CATAAATCTGGTGGAAAAAG+TGG | - | chr1_3:34720629-34720648 | Msa0115810:intron | 35.0% | |
| TAAATCTGGTGGAAAAAGTG+GGG | - | chr1_3:34720631-34720650 | Msa0115810:intron | 35.0% | |
| GTGTGTTCTTAGAAATTGGA+AGG | + | chr1_3:34720692-34720711 | None:intergenic | 35.0% | |
| CACAGTGTGTTCTTAGAAAT+TGG | + | chr1_3:34720696-34720715 | None:intergenic | 35.0% | |
| CATAGACAACGACAAGAGAA+AGG | - | chr1_3:34717825-34717844 | Msa0115810:three_prime_UTR | 40.0% | |
| CTGCATCTCCTCAATCAAAA+AGG | - | chr1_3:34717884-34717903 | Msa0115810:three_prime_UTR | 40.0% | |
| TTCTCACTAACAGCGTTAAC+AGG | + | chr1_3:34718149-34718168 | None:intergenic | 40.0% | |
| GAAGAAACCATTATATCCCG+CGG | + | chr1_3:34718211-34718230 | None:intergenic | 40.0% | |
| AGTTCTGCTATGCTAAAACG+AGG | - | chr1_3:34718329-34718348 | Msa0115810:CDS | 40.0% | |
| ACATGGCTGCATCAATATTG+GGG | + | chr1_3:34718415-34718434 | None:intergenic | 40.0% | |
| GAACATGGCTGCATCAATAT+TGG | + | chr1_3:34718417-34718436 | None:intergenic | 40.0% | |
| TGTCAAATAGAGGCTATAGC+GGG | + | chr1_3:34718608-34718627 | None:intergenic | 40.0% | |
| GTGTCAAATAGAGGCTATAG+CGG | + | chr1_3:34718609-34718628 | None:intergenic | 40.0% | |
| ! | TACACAGTGGTGTCAAATAG+AGG | + | chr1_3:34718618-34718637 | None:intergenic | 40.0% |
| GACACCACTGTGTACTAAAT+TGG | - | chr1_3:34718624-34718643 | Msa0115810:intron | 40.0% | |
| TTTCATTTGGGCCATCTTAG+AGG | + | chr1_3:34718830-34718849 | None:intergenic | 40.0% | |
| ACACATGATGGCAAAGCTAT+TGG | + | chr1_3:34719004-34719023 | None:intergenic | 40.0% | |
| TAAAAAGGGAACTTAGTGGG+TGG | - | chr1_3:34719135-34719154 | Msa0115810:intron | 40.0% | |
| GTGTACAATACACCGAATAG+TGG | + | chr1_3:34719269-34719288 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr1_3:34719299-34719318 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr1_3:34719300-34719319 | None:intergenic | 40.0% | |
| TCCAGGCGTTTCAAAAATGA+AGG | - | chr1_3:34719321-34719340 | Msa0115810:intron | 40.0% | |
| !!! | TCCTTCATTTTTGAAACGCC+TGG | + | chr1_3:34719325-34719344 | None:intergenic | 40.0% |
| ! | TTTTAACAGAGTGCAGACAG+TGG | - | chr1_3:34719382-34719401 | Msa0115810:intron | 40.0% |
| TTTAACAGAGTGCAGACAGT+GGG | - | chr1_3:34719383-34719402 | Msa0115810:intron | 40.0% | |
| !! | ATTTTAACAAACCTCGAGGG+AGG | - | chr1_3:34719479-34719498 | Msa0115810:intron | 40.0% |
| GCTTACTGTTATAAGCTCTC+TGG | + | chr1_3:34719688-34719707 | None:intergenic | 40.0% | |
| AGTTTATGTGTGAACCACCT+AGG | + | chr1_3:34719909-34719928 | None:intergenic | 40.0% | |
| ACAGATTCCATTTCCTGAGA+CGG | + | chr1_3:34720080-34720099 | None:intergenic | 40.0% | |
| ATGTTTCGAGATGACACATG+AGG | + | chr1_3:34720164-34720183 | None:intergenic | 40.0% | |
| CATGTGTCATCTCGAAACAT+AGG | - | chr1_3:34720164-34720183 | Msa0115810:intron | 40.0% | |
| GACTCATACTGGAAATTCAG+GGG | - | chr1_3:34720205-34720224 | Msa0115810:intron | 40.0% | |
| AAATTCAGGGGAAGCTCAAA+TGG | - | chr1_3:34720217-34720236 | Msa0115810:intron | 40.0% | |
| !! | TTGTTTTGCTGCAGTTATGC+CGG | + | chr1_3:34720378-34720397 | None:intergenic | 40.0% |
| TGTTATGGCACAATGGAATC+AGG | + | chr1_3:34720409-34720428 | None:intergenic | 40.0% | |
| ATGTGCAAAGCTGCTTCAAA+AGG | - | chr1_3:34720578-34720597 | Msa0115810:intron | 40.0% | |
| ACATCAATCAACCTGTCACG+AGG | - | chr1_3:34718102-34718121 | Msa0115810:CDS | 45.0% | |
| GTTGACAACATTGGTGGAAC+TGG | + | chr1_3:34718182-34718201 | None:intergenic | 45.0% | |
| TCCACCAATGTTGTCAACTG+TGG | - | chr1_3:34718184-34718203 | Msa0115810:CDS | 45.0% | |
| TCCACAGTTGACAACATTGG+TGG | + | chr1_3:34718188-34718207 | None:intergenic | 45.0% | |
| AGCGTATTGCGGAACAATAG+CGG | - | chr1_3:34718298-34718317 | Msa0115810:CDS | 45.0% | |
| !! | CATCAATATTGGGGCTAGCT+TGG | + | chr1_3:34718406-34718425 | None:intergenic | 45.0% |
| ! | TTCTATAGTGCCGCTAACAG+AGG | - | chr1_3:34718564-34718583 | Msa0115810:CDS | 45.0% |
| GCATCTATAGCCTCTGTTAG+CGG | + | chr1_3:34718577-34718596 | None:intergenic | 45.0% | |
| ! | TGGGTATTGCGGAACATTAG+CGG | - | chr1_3:34718644-34718663 | Msa0115810:intron | 45.0% |
| !! | GAGCTGTTTTGCCTCTAAGA+TGG | - | chr1_3:34718816-34718835 | Msa0115810:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1_3:34719304-34719323 | Msa0115810:intron | 45.0% |
| AAGTAGGGGATGGTTGTGTT+TGG | - | chr1_3:34719429-34719448 | Msa0115810:intron | 45.0% | |
| AGGGAGGAGAATGGAATTTG+CGG | - | chr1_3:34719495-34719514 | Msa0115810:intron | 45.0% | |
| GTTTCGGTTGAGACTAGACA+TGG | + | chr1_3:34719617-34719636 | None:intergenic | 45.0% | |
| AGACTGTTGTGGAGAGCTTA+TGG | + | chr1_3:34719745-34719764 | None:intergenic | 45.0% | |
| AAGCACTAGTGAGACTGTTG+TGG | + | chr1_3:34719756-34719775 | None:intergenic | 45.0% | |
| AATCCATTCACATGCCTAGG+TGG | - | chr1_3:34719892-34719911 | Msa0115810:intron | 45.0% | |
| GCTTATTCCGTCTCAGGAAA+TGG | - | chr1_3:34720070-34720089 | Msa0115810:intron | 45.0% | |
| GGAAAAAGGAGACGTGCTTA+CGG | - | chr1_3:34720340-34720359 | Msa0115810:intron | 45.0% | |
| CTTACGGTTGCGAAAATTGC+CGG | - | chr1_3:34720356-34720375 | Msa0115810:intron | 45.0% | |
| AGGCCTATGTTATGGCACAA+TGG | + | chr1_3:34720416-34720435 | None:intergenic | 45.0% | |
| CGTGTGTAAGGCCTATGTTA+TGG | + | chr1_3:34720424-34720443 | None:intergenic | 45.0% | |
| AATCCACTTGCACGTGTGTA+AGG | + | chr1_3:34720436-34720455 | None:intergenic | 45.0% | |
| ATGACAGCAGTGTCTATTGC+TGG | - | chr1_3:34720539-34720558 | Msa0115810:intron | 45.0% | |
| GAAAAAGTGGGGATTACTCC+TGG | - | chr1_3:34720642-34720661 | Msa0115810:intron | 45.0% | |
| CGGTCCACAGTTGACAACAT+TGG | + | chr1_3:34718191-34718210 | None:intergenic | 50.0% | |
| ATGTTGTCAACTGTGGACCG+CGG | - | chr1_3:34718191-34718210 | Msa0115810:CDS | 50.0% | |
| GCGTATTGCGGAACAATAGC+GGG | - | chr1_3:34718299-34718318 | Msa0115810:CDS | 50.0% | |
| !! | GGTGGACTAACAGCGTTAAC+AGG | + | chr1_3:34718484-34718503 | None:intergenic | 50.0% |
| CTGTGGATCGCCAGAAATAG+TGG | - | chr1_3:34718515-34718534 | Msa0115810:CDS | 50.0% | |
| ! | GGGTATTGCGGAACATTAGC+GGG | - | chr1_3:34718645-34718664 | Msa0115810:intron | 50.0% |
| ! | TGCGGGAGCTTTAGTGCATT+GGG | + | chr1_3:34719223-34719242 | None:intergenic | 50.0% |
| ! | ATGCGGGAGCTTTAGTGCAT+TGG | + | chr1_3:34719224-34719243 | None:intergenic | 50.0% |
| ACTAAAGCTCCCGCATATGC+AGG | - | chr1_3:34719228-34719247 | Msa0115810:intron | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | - | chr1_3:34719229-34719248 | Msa0115810:intron | 50.0% | |
| AATTCCATTCTCCTCCCTCG+AGG | + | chr1_3:34719493-34719512 | None:intergenic | 50.0% | |
| GGGCAAGACGATCTAGTAAG+TGG | + | chr1_3:34719856-34719875 | None:intergenic | 50.0% | |
| GAACCACCTAGGCATGTGAA+TGG | + | chr1_3:34719898-34719917 | None:intergenic | 50.0% | |
| ACAGAGCTAAGTAGTCCGTC+TGG | + | chr1_3:34720119-34720138 | None:intergenic | 50.0% | |
| GACACATGAGGTTCATTCGC+AGG | + | chr1_3:34720152-34720171 | None:intergenic | 50.0% | |
| GCTGCTTCAACCGGAAAAAC+CGG | - | chr1_3:34720500-34720519 | Msa0115810:intron | 50.0% | |
| CTGCTTCAACCGGAAAAACC+GGG | - | chr1_3:34720501-34720520 | Msa0115810:intron | 50.0% | |
| TGCTTCAACCGGAAAAACCG+GGG | - | chr1_3:34720502-34720521 | Msa0115810:intron | 50.0% | |
| ! | CATCTCAACCCCGGTTTTTC+CGG | + | chr1_3:34720513-34720532 | None:intergenic | 50.0% |
| CATTGCTTCCATCTCAACCC+CGG | + | chr1_3:34720522-34720541 | None:intergenic | 50.0% | |
| GTGCTGTGAAACCTCGTGAC+AGG | + | chr1_3:34718116-34718135 | None:intergenic | 55.0% | |
| TGTTGTCAACTGTGGACCGC+GGG | - | chr1_3:34718192-34718211 | Msa0115810:CDS | 55.0% | |
| CTGTGGACCGCGGGATATAA+TGG | - | chr1_3:34718201-34718220 | Msa0115810:CDS | 55.0% | |
| CAAACCTCGAGGGAGGAGAA+TGG | - | chr1_3:34719486-34719505 | Msa0115810:intron | 55.0% | |
| TTTGGGGACTTTCCGCCAGA+CGG | - | chr1_3:34720101-34720120 | Msa0115810:intron | 55.0% | |
| GAGCTAAGTAGTCCGTCTGG+CGG | + | chr1_3:34720116-34720135 | None:intergenic | 55.0% | |
| AGGCCTTACACACGTGCAAG+TGG | - | chr1_3:34720430-34720449 | Msa0115810:intron | 55.0% | |
| GAAGGGGAAGCTGCTTCAAC+CGG | - | chr1_3:34720491-34720510 | Msa0115810:intron | 55.0% | |
| CGGAAAAACCGGGGTTGAGA+TGG | - | chr1_3:34720511-34720530 | Msa0115810:intron | 55.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr1_3:34719240-34719259 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr1_3:34719241-34719260 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr1_3:34719240-34719259 | Msa0115810:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr1_3:34719241-34719260 | Msa0115810:intron | 60.0% | |
| ! | CGAATAGTGGGACCCCTTCC+CGG | + | chr1_3:34719256-34719275 | None:intergenic | 60.0% |
| CGGGAAGGGGTCCCACTATT+CGG | - | chr1_3:34719254-34719273 | Msa0115810:intron | 60.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr1_3:34719234-34719253 | Msa0115810:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr1_3:34719235-34719254 | Msa0115810:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr1_3:34719239-34719258 | Msa0115810:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 34717750 | 34720968 | 34717750 | ID=Msa0115810;Name=Msa0115810 |
| chr1_3 | mRNA | 34717750 | 34720968 | 34717750 | ID=Msa0115810-mRNA-1;Parent=Msa0115810;Name=Msa0115810-mRNA-1;_AED=0.03;_eAED=0.03;_QI=106|1|1|1|1|1|2|295|233 |
| chr1_3 | exon | 34717750 | 34718632 | 34717750 | ID=Msa0115810-mRNA-1:exon:11020;Parent=Msa0115810-mRNA-1 |
| chr1_3 | exon | 34720749 | 34720968 | 34720749 | ID=Msa0115810-mRNA-1:exon:11019;Parent=Msa0115810-mRNA-1 |
| chr1_3 | five_prime_UTR | 34720863 | 34720968 | 34720863 | ID=Msa0115810-mRNA-1:five_prime_utr;Parent=Msa0115810-mRNA-1 |
| chr1_3 | CDS | 34720749 | 34720862 | 34720749 | ID=Msa0115810-mRNA-1:cds;Parent=Msa0115810-mRNA-1 |
| chr1_3 | CDS | 34718045 | 34718632 | 34718045 | ID=Msa0115810-mRNA-1:cds;Parent=Msa0115810-mRNA-1 |
| chr1_3 | three_prime_UTR | 34717750 | 34718044 | 34717750 | ID=Msa0115810-mRNA-1:three_prime_utr;Parent=Msa0115810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
