AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1346890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1346890 MtrunA17_Chr2g0292471 95.213 564 17 1 1 554 1 564 0.0 1115
Msa1346890 MtrunA17_Chr6g0471921 26.157 562 339 14 4 546 10 514 3.24e-37 144
Msa1346890 MtrunA17_Chr2g0327341 26.355 535 323 17 29 543 56 539 2.96e-36 142
Msa1346890 MtrunA17_Chr1g0180551 27.122 483 294 13 21 476 113 564 3.36e-36 142
Msa1346890 MtrunA17_Chr5g0409771 26.606 545 312 15 31 547 71 555 6.33e-36 141
Msa1346890 MtrunA17_Chr1g0180541 26.566 463 303 11 26 476 54 491 1.12e-34 137
Msa1346890 MtrunA17_Chr5g0433231 25.294 510 339 14 48 541 60 543 1.02e-33 135
Msa1346890 MtrunA17_Chr4g0039791 26.071 537 325 13 32 547 76 561 1.08e-33 135
Msa1346890 MtrunA17_Chr4g0028411 26.565 527 333 14 32 549 59 540 1.22e-33 134
Msa1346890 MtrunA17_Chr5g0433241 25.725 552 363 15 8 541 20 542 2.91e-33 133
Msa1346890 MtrunA17_Chr4g0000461 26.255 518 324 13 40 543 65 538 3.93e-31 127
Msa1346890 MtrunA17_Chr5g0396331 25.184 544 364 13 8 540 20 531 6.49e-31 126
Msa1346890 MtrunA17_Chr5g0409791 26.449 552 314 17 32 547 73 568 1.12e-30 126
Msa1346890 MtrunA17_Chr5g0395431 26.652 454 284 13 40 476 109 530 7.86e-30 124
Msa1346890 MtrunA17_Chr3g0109731 25.182 548 341 18 27 542 39 549 3.60e-29 121
Msa1346890 MtrunA17_Chr5g0396311 25.788 539 346 17 29 550 41 542 1.73e-28 119
Msa1346890 MtrunA17_Chr8g0370701 26.372 565 341 19 8 543 62 580 2.55e-28 119
Msa1346890 MtrunA17_Chr5g0433221 24.272 515 338 15 48 541 60 543 4.78e-28 118
Msa1346890 MtrunA17_Chr1g0197391 26.105 475 289 15 32 486 87 519 1.61e-26 113
Msa1346890 MtrunA17_Chr4g0004101 27.324 355 198 13 218 546 10 330 1.67e-26 110
Msa1346890 MtrunA17_Chr4g0068151 22.325 542 375 13 22 543 40 555 7.24e-26 111
Msa1346890 MtrunA17_Chr2g0301671 22.468 543 373 16 22 543 40 555 8.45e-26 111
Msa1346890 MtrunA17_Chr6g0471311 24.031 516 340 15 48 541 60 545 4.23e-25 109
Msa1346890 MtrunA17_Chr1g0157401 24.242 528 355 12 29 547 69 560 5.07e-24 105
Msa1346890 MtrunA17_Chr4g0072561 25.835 569 335 24 7 548 37 545 1.07e-23 105
Msa1346890 MtrunA17_Chr8g0353341 24.190 463 292 12 29 465 66 495 1.75e-23 104
Msa1346890 MtrunA17_Chr5g0406681 23.446 563 325 19 27 545 67 567 2.06e-21 98.2
Msa1346890 MtrunA17_Chr3g0116251 25.000 352 215 8 128 465 172 488 2.61e-21 97.8
Msa1346890 MtrunA17_Chr8g0370731 24.548 387 244 12 169 542 139 490 4.80e-21 96.7
Msa1346890 MtrunA17_Chr4g0004841 26.549 339 186 15 237 546 35 339 7.43e-21 94.0
Msa1346890 MtrunA17_Chr3g0116271 25.240 313 189 7 171 465 205 490 3.00e-20 94.4
Msa1346890 MtrunA17_Chr3g0102411 23.162 544 344 16 29 552 57 546 5.33e-19 90.5
Msa1346890 MtrunA17_Chr1g0186071 25.714 350 210 9 128 465 177 488 2.38e-18 88.6
Msa1346890 MtrunA17_Chr2g0334131 26.899 316 185 9 238 543 1 280 1.81e-17 83.2
Msa1346890 MtrunA17_Chr5g0396691 24.185 368 205 11 171 487 227 571 2.24e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1346890 AT1G30520.2 55.674 564 227 6 3 554 8 560 0.0 652
Msa1346890 AT1G30520.1 55.674 564 227 6 3 554 8 560 0.0 652
Msa1346890 AT1G30520.3 57.582 455 170 6 3 445 8 451 0.0 535
Msa1346890 AT1G30520.4 57.582 455 170 6 3 445 8 451 0.0 535
Msa1346890 AT3G21240.1 27.481 524 323 13 40 549 76 556 1.53e-39 152
Msa1346890 AT3G21240.2 29.748 437 264 11 40 462 76 483 3.06e-37 144
Msa1346890 AT3G21240.3 29.748 437 264 11 40 462 76 483 3.06e-37 144
Msa1346890 AT4G05160.1 25.654 573 335 18 8 547 30 544 9.28e-34 135
Msa1346890 AT3G48990.1 27.701 509 311 17 48 546 52 513 2.63e-33 133
Msa1346890 AT4G19010.1 26.443 537 317 17 37 549 82 564 4.98e-33 133
Msa1346890 AT1G66120.1 25.741 540 349 16 22 540 34 542 1.70e-32 132
Msa1346890 AT1G65880.1 25.408 551 345 18 22 540 34 550 6.58e-32 130
Msa1346890 AT1G21540.1 24.138 522 332 18 46 541 61 544 8.44e-31 126
Msa1346890 AT3G21230.1 25.142 529 321 16 40 543 86 564 3.45e-30 125
Msa1346890 AT1G21530.1 23.404 517 339 15 46 541 61 541 5.15e-30 124
Msa1346890 AT1G65890.1 25.368 544 353 17 22 540 34 549 8.23e-30 124
Msa1346890 AT1G77240.1 24.517 518 331 18 46 541 60 539 8.79e-30 123
Msa1346890 AT1G20480.1 26.577 444 279 11 40 467 87 499 1.21e-29 123
Msa1346890 AT3G21230.3 26.059 472 288 14 40 486 86 521 2.85e-29 122
Msa1346890 AT1G51680.1 26.426 526 327 15 40 547 78 561 2.87e-29 122
Msa1346890 AT1G21530.2 23.359 518 340 16 46 541 61 543 5.11e-29 121
Msa1346890 AT3G16170.1 25.693 541 297 21 47 543 125 604 6.26e-29 121
Msa1346890 AT3G16910.1 23.133 549 363 17 22 543 42 558 1.15e-28 120
Msa1346890 AT3G21230.2 26.562 448 268 14 40 462 86 497 1.42e-27 116
Msa1346890 AT1G51680.3 27.312 465 292 13 40 486 78 514 8.41e-27 114
Msa1346890 AT1G65060.1 23.438 512 345 12 40 543 88 560 9.50e-27 114
Msa1346890 AT5G16340.1 23.423 555 367 19 8 540 20 538 1.28e-26 114
Msa1346890 AT5G16370.1 23.593 551 373 18 8 541 20 539 1.31e-26 114
Msa1346890 AT1G51680.2 28.118 441 271 13 40 462 78 490 2.71e-26 112
Msa1346890 AT1G75960.1 22.801 557 370 17 8 541 20 539 3.37e-26 112
Msa1346890 AT1G20510.1 23.789 454 312 8 22 465 47 476 9.00e-25 108
Msa1346890 AT1G20560.1 23.327 553 369 14 8 540 22 539 1.99e-24 107
Msa1346890 AT2G17650.1 23.951 572 371 15 8 550 67 603 2.45e-24 107
Msa1346890 AT1G20510.2 23.556 450 310 8 22 461 47 472 1.61e-23 104
Msa1346890 AT1G76290.1 23.507 536 357 14 22 541 34 532 2.33e-23 104
Msa1346890 AT1G20500.1 23.410 393 251 9 166 547 197 550 8.04e-21 96.7
Msa1346890 AT1G65060.2 23.991 446 303 11 7 442 54 473 8.47e-21 96.3
Msa1346890 AT5G38120.1 23.969 388 253 9 166 547 199 550 1.12e-20 96.3
Msa1346890 AT1G20560.2 25.263 380 248 11 168 540 111 461 1.36e-20 95.5
Msa1346890 AT5G38120.3 24.534 322 217 6 166 481 199 500 2.58e-20 94.7
Msa1346890 AT5G63380.1 23.765 425 261 13 70 476 122 501 7.63e-19 90.5
Msa1346890 AT1G68270.1 24.542 546 325 18 22 540 34 519 8.60e-19 90.1
Msa1346890 AT5G38120.4 24.667 300 202 5 166 461 199 478 8.67e-19 89.7
Msa1346890 AT5G38120.2 24.667 300 202 5 166 461 199 478 8.67e-19 89.7
Msa1346890 AT1G20510.3 22.430 428 300 7 22 440 47 451 3.94e-17 84.7
Msa1346890 AT1G77590.1 22.570 607 358 20 32 552 111 691 5.43e-17 85.1
Msa1346890 AT3G21230.4 26.110 383 222 14 40 397 86 432 6.36e-16 80.9
Msa1346890 AT1G62940.1 24.074 540 325 16 32 545 58 538 2.25e-15 79.3
Msa1346890 AT4G23850.1 22.149 605 367 19 28 554 80 658 7.44e-13 71.6
Msa1346890 AT4G14070.1 26.829 287 164 11 285 552 468 727 2.91e-11 66.6
Msa1346890 AT3G23790.1 25.430 291 172 11 285 551 452 721 4.25e-11 66.2

Find 143 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGTCTTGCGGTTGTTTC+CGG 0.138536 tig0009259:+51894 None:intergenic
GTATTGTTGAAGATTCTTTA+TGG 0.189352 tig0009259:+46692 None:intergenic
ATCACTTTGCTAAATTATTA+TGG 0.200388 tig0009259:-51980 Msa1346890:exon
GCTAAGCTTATTTCAGCTTA+TGG 0.243792 tig0009259:-47905 Msa1346890:intron
CTGAAATAAGCTTAGCCTTA+TGG 0.257659 tig0009259:+47912 None:intergenic
CTCCATTCAATGAATATCTT+TGG 0.260778 tig0009259:+46509 None:intergenic
CTCGACTTTATTACCTCTTC+AGG 0.267324 tig0009259:+47105 None:intergenic
CACATTTAATGCTCAGGTAT+TGG 0.279874 tig0009259:-47272 Msa1346890:CDS
GGCAGAGATAAGTTCGTTAA+AGG 0.280082 tig0009259:-52024 Msa1346890:five_prime_UTR
AACTTTCCGGCGAGATTTCC+CGG 0.284469 tig0009259:-51926 Msa1346890:CDS
AATTTATCAACCAAACAAAT+TGG 0.293960 tig0009259:+46270 None:intergenic
CTTACCCAACGATAATTTAG+AGG 0.298272 tig0009259:+49677 None:intergenic
ACATTTAATGCTCAGGTATT+GGG 0.304553 tig0009259:-47271 Msa1346890:CDS
TGAGTCGATTGTTAACTTTC+CGG 0.324819 tig0009259:-51939 Msa1346890:CDS
GTCATAATCTGCTTCACTTC+AGG 0.329764 tig0009259:-49153 Msa1346890:intron
CCAGTCTTATTTCTATTGTT+AGG 0.336433 tig0009259:-48300 Msa1346890:intron
TAGAAAACTACACAAATGTT+TGG 0.336660 tig0009259:-46360 Msa1346890:three_prime_UTR
GATTTCCCGGTGACCATTGC+CGG 0.337005 tig0009259:-51913 Msa1346890:CDS
ATGGCTTATTGTGACTCCCT+TGG 0.346950 tig0009259:+48756 None:intergenic
CTTGCGGTTGTTTCCGGCAA+TGG 0.359048 tig0009259:+51900 None:intergenic
ATCAGCCATGGCCATGCTTA+TGG 0.367491 tig0009259:-48428 Msa1346890:CDS
TTATTAGCTATTGCATTTGT+TGG 0.372199 tig0009259:-49713 Msa1346890:CDS
GTATCCAACCAAGAGAAAAT+TGG 0.375134 tig0009259:-46758 Msa1346890:CDS
ATCCTCACTATATCCAACTA+TGG 0.378252 tig0009259:+48699 None:intergenic
TGGCTTATTGTGACTCCCTT+GGG 0.378428 tig0009259:+48757 None:intergenic
TGACGCCTCTTAAGTATTCC+TGG 0.387384 tig0009259:+49222 None:intergenic
CAGATTATGACAGCTCCTTC+AGG 0.398236 tig0009259:+49165 None:intergenic
TTGTTTCCGGCAATGGTCAC+CGG 0.401079 tig0009259:+51907 None:intergenic
ATATCCAACTATGGCAATCT+TGG 0.407023 tig0009259:+48708 None:intergenic
GCATCGGATCATACAGCGTT+AGG 0.411279 tig0009259:+47451 None:intergenic
GGAATTATACTTTCAGATAG+AGG 0.423641 tig0009259:-46339 Msa1346890:three_prime_UTR
TTGATGCAAAATTAGCTGTT+GGG 0.425782 tig0009259:-48375 Msa1346890:CDS
CATGGTAACTTGTGGCTCCT+TGG 0.426756 tig0009259:-47171 Msa1346890:CDS
AAACCACCAATGTGACATAA+TGG 0.427809 tig0009259:+48454 None:intergenic
CCCGTGGTAGTGAGTGGAAA+AGG 0.430173 tig0009259:+46482 None:intergenic
TCAGTGATTTGTATCTAGAA+TGG 0.432332 tig0009259:-49736 Msa1346890:intron
TCTTCACCATATGTTTGAAA+AGG 0.438172 tig0009259:+47411 None:intergenic
ATAAGACTGGTCATCATTGC+AGG 0.438560 tig0009259:+48313 None:intergenic
CTCTAGAATTTAACTACTCA+TGG 0.440010 tig0009259:-49191 Msa1346890:CDS
CACCTGGTGTGACACCCAAC+TGG 0.443490 tig0009259:+51827 None:intergenic
ACAGAACCTCCTTTCGGACT+TGG 0.445695 tig0009259:+46444 None:intergenic
TACCAAAGATATTCATTGAA+TGG 0.447730 tig0009259:-46511 Msa1346890:CDS
AGATGCACGTTTCACAGAAA+TGG 0.448407 tig0009259:-46790 Msa1346890:CDS
TACAGGTGACATTGGATCAA+TGG 0.451600 tig0009259:-47199 Msa1346890:CDS
TGCTCCTCTAAATTATCGTT+GGG 0.451852 tig0009259:-49681 Msa1346890:intron
CAAATCAAAGGAATGAAGTC+TGG 0.453350 tig0009259:-47227 Msa1346890:CDS
TGGCTCCTTGGACGTACAAA+TGG 0.453603 tig0009259:-47159 Msa1346890:CDS
GAATCTTCAACAATACTGTC+TGG 0.453883 tig0009259:-46685 Msa1346890:CDS
CTCCAGTTGGGTGTCACACC+AGG 0.454009 tig0009259:-51829 Msa1346890:CDS
ATTTCTGTGAAACGTGCATC+TGG 0.458998 tig0009259:+46792 None:intergenic
GCCGGAAACAACCGCAAGAC+AGG 0.463121 tig0009259:-51895 Msa1346890:CDS
GTCTGGAAAATAATTTAAGC+AGG 0.465915 tig0009259:-46668 Msa1346890:intron
CTAGCCAAGATTGCCATAGT+TGG 0.468087 tig0009259:-48712 Msa1346890:CDS
ACTGTATGATCAAAGCTTCA+TGG 0.471609 tig0009259:+48737 None:intergenic
TCGACTTTATTACCTCTTCA+GGG 0.471877 tig0009259:+47106 None:intergenic
CAAGACAGGGCAGCAGTTGG+TGG 0.472007 tig0009259:-51881 Msa1346890:CDS
CACTAGCATATTCTTCCATA+AGG 0.474735 tig0009259:-47927 Msa1346890:CDS
AATGAAGTCTGGTTTGATAC+AGG 0.474828 tig0009259:-47216 Msa1346890:CDS
CTGCTCCTCTAAATTATCGT+TGG 0.476833 tig0009259:-49682 Msa1346890:CDS
CAAACTTCGGCATGAATACA+TGG 0.477472 tig0009259:+48395 None:intergenic
CACCATATGTTTGAAAAGGA+TGG 0.478683 tig0009259:+47415 None:intergenic
TGTTCTTCAGTGTTGACTCC+AGG 0.481773 tig0009259:-49240 Msa1346890:intron
GCAGCAGTTGGTGGAGGAAG+TGG 0.485516 tig0009259:-51872 Msa1346890:CDS
GACAGGGCAGCAGTTGGTGG+AGG 0.487040 tig0009259:-51878 Msa1346890:CDS
ATTGCAAGAGTTGTTATTGT+GGG 0.487164 tig0009259:-46819 Msa1346890:CDS
TTGATGAGAGCTGCTATTCA+TGG 0.488273 tig0009259:-49455 Msa1346890:CDS
TGGTTGATGAATGATATGTT+TGG 0.488864 tig0009259:+47383 None:intergenic
TTCTGTCCAGAAATATATTG+AGG 0.490628 tig0009259:-46305 Msa1346890:three_prime_UTR
GCTCAGACAGAACCTCCTTT+CGG 0.494105 tig0009259:+46438 None:intergenic
TTTGATGCAAAATTAGCTGT+TGG 0.494174 tig0009259:-48376 Msa1346890:CDS
GCTTGACTACTAGGAACTAC+TGG 0.496193 tig0009259:-48784 Msa1346890:intron
GAGGGCCACATTTAATGCTC+AGG 0.501334 tig0009259:-47278 Msa1346890:CDS
TAGCCATCTCTGCTTACAAC+AGG 0.504818 tig0009259:-51798 Msa1346890:intron
GTTTGTAAAATCTGAGGAAG+GGG 0.507191 tig0009259:+49374 None:intergenic
GCTCCATTATGTCACATTGG+TGG 0.510373 tig0009259:-48457 Msa1346890:CDS
CAACTATGGCAATCTTGGCT+AGG 0.510566 tig0009259:+48713 None:intergenic
GGCGCAAAGAAACCTGGAAA+GGG 0.515036 tig0009259:-48012 Msa1346890:CDS
TTAGCTATTGCATTTGTTGG+AGG 0.516957 tig0009259:-49710 Msa1346890:CDS
GCAATTCTACTAGAACATCC+AGG 0.521231 tig0009259:-46843 Msa1346890:CDS
TTGATTTGATGTGTTTGTGA+GGG 0.522548 tig0009259:+47242 None:intergenic
TGTTTCCGGCAATGGTCACC+GGG 0.525781 tig0009259:+51908 None:intergenic
GTACCTGTTGTAAGCAGAGA+TGG 0.525957 tig0009259:+51795 None:intergenic
ATAACAACTCTTGCAATCCC+TGG 0.532142 tig0009259:+46825 None:intergenic
ACTGTCAAGAAAATACTCAA+TGG 0.532429 tig0009259:-47983 Msa1346890:CDS
AGCACACGGTCTTCTCCAGT+TGG 0.535214 tig0009259:-51842 Msa1346890:CDS
TGATGCAAAATTAGCTGTTG+GGG 0.535858 tig0009259:-48374 Msa1346890:CDS
AACTATGGCAATCTTGGCTA+GGG 0.537225 tig0009259:+48714 None:intergenic
CCACTTGTTTGTAAAATCTG+AGG 0.547604 tig0009259:+49368 None:intergenic
GCCATGGCCATGCTTATGGT+TGG 0.548469 tig0009259:-48424 Msa1346890:CDS
TGGTGGTTTGTCATCAGCCA+TGG 0.548639 tig0009259:-48440 Msa1346890:CDS
TTGTTTGTAAAATCTGAGGA+AGG 0.549300 tig0009259:+49372 None:intergenic
ATGGCCATGCTTATGGTTGG+AGG 0.549412 tig0009259:-48421 Msa1346890:CDS
CCAACTGCTGCCCTGTCTTG+CGG 0.549663 tig0009259:+51884 None:intergenic
CAACCACAAGGTGTTTGTGT+TGG 0.562824 tig0009259:-47366 Msa1346890:CDS
AAGAAAATACTCAATGGAGG+TGG 0.563554 tig0009259:-47977 Msa1346890:CDS
CATATCTTCAGTTCTACATG+AGG 0.564188 tig0009259:+47333 None:intergenic
TGTTTGTAAAATCTGAGGAA+GGG 0.565057 tig0009259:+49373 None:intergenic
TTTGATTTGATGTGTTTGTG+AGG 0.567333 tig0009259:+47241 None:intergenic
CATGAGTAGTTAAATTCTAG+AGG 0.567872 tig0009259:+49192 None:intergenic
TCATCAATCACTAACATCAC+TGG 0.571349 tig0009259:+49471 None:intergenic
TGCGACCATTTGTACGTCCA+AGG 0.572792 tig0009259:+47154 None:intergenic
TCACAAACACATCAAATCAA+AGG 0.576584 tig0009259:-47239 Msa1346890:CDS
AAGAAGAGACCAAGTCCGAA+AGG 0.576659 tig0009259:-46453 Msa1346890:CDS
TGGTTTGATACAGGTGACAT+TGG 0.576730 tig0009259:-47207 Msa1346890:CDS
TCCAACCATAAGCATGGCCA+TGG 0.577410 tig0009259:+48423 None:intergenic
GCACACGGTCTTCTCCAGTT+GGG 0.579241 tig0009259:-51841 Msa1346890:CDS
TGACTCCAGGAATACTTAAG+AGG 0.581970 tig0009259:-49227 Msa1346890:CDS
CCTAACAATAGAAATAAGAC+TGG 0.589722 tig0009259:+48300 None:intergenic
CTTTGCATAGTAATCTCTGA+AGG 0.595402 tig0009259:-46409 Msa1346890:exon
CCGCAAGACAGGGCAGCAGT+TGG 0.597693 tig0009259:-51884 Msa1346890:CDS
GATTGCAAGAGTTGTTATTG+TGG 0.598009 tig0009259:-46820 Msa1346890:CDS
TGGTCACCGGGAAATCTCGC+CGG 0.600959 tig0009259:+51920 None:intergenic
AGGCGCAAAGAAACCTGGAA+AGG 0.602092 tig0009259:-48013 Msa1346890:CDS
TCTAGAATTTAACTACTCAT+GGG 0.603181 tig0009259:-49190 Msa1346890:CDS
ATATGCAAAGACGGTGACGC+AGG 0.606011 tig0009259:-47315 Msa1346890:CDS
AACTACTCATGGGCACCTGA+AGG 0.606864 tig0009259:-49180 Msa1346890:CDS
CGCAAAGAAACCTGGAAAGG+GGG 0.608439 tig0009259:-48010 Msa1346890:CDS
AACCAAGAGAAAATTGGCAA+TGG 0.609431 tig0009259:-46752 Msa1346890:CDS
CCGGAAACAACCGCAAGACA+GGG 0.611103 tig0009259:-51894 Msa1346890:CDS
AGAGAACATTTACCCTGAAG+AGG 0.613996 tig0009259:-47118 Msa1346890:intron
AGGAACTACTGGAAAACCCA+AGG 0.622099 tig0009259:-48773 Msa1346890:CDS
CAATTCTACTAGAACATCCA+GGG 0.626169 tig0009259:-46842 Msa1346890:CDS
ACAAATGGTCGCATCAAGAG+TGG 0.626703 tig0009259:-47144 Msa1346890:CDS
ACAAGGTGTTTGTGTTGGCA+AGG 0.627900 tig0009259:-47361 Msa1346890:CDS
GCAACCTCCAACCATAAGCA+TGG 0.633298 tig0009259:+48417 None:intergenic
GTCAAGAAAATACTCAATGG+AGG 0.634780 tig0009259:-47980 Msa1346890:CDS
TGCCATAGTTGGATATAGTG+AGG 0.637714 tig0009259:-48701 Msa1346890:CDS
GAGATGGCTACAACATCACC+TGG 0.638785 tig0009259:+51811 None:intergenic
GCGCAAAGAAACCTGGAAAG+GGG 0.640363 tig0009259:-48011 Msa1346890:CDS
AAGAGACCAAGTCCGAAAGG+AGG 0.641225 tig0009259:-46450 Msa1346890:CDS
TTGCCAACACAAACACCTTG+TGG 0.647309 tig0009259:+47363 None:intergenic
CTTTGATAAGCTCAAACGAG+AGG 0.647321 tig0009259:+47951 None:intergenic
ACTGCTCCATTATGTCACAT+TGG 0.647924 tig0009259:-48460 Msa1346890:CDS
GAACTGAAGATATGCAAAGA+CGG 0.650069 tig0009259:-47324 Msa1346890:CDS
TGTTTGAAAAGGATGGCTGA+TGG 0.657586 tig0009259:+47422 None:intergenic
CATATCATTCATCAACCACA+AGG 0.667147 tig0009259:-47378 Msa1346890:CDS
CAATACCTGAGCATTAAATG+TGG 0.673624 tig0009259:+47273 None:intergenic
AATGGTCGCATCAAGAGTGG+CGG 0.674444 tig0009259:-47141 Msa1346890:CDS
TGGATTGTCATGGTAACTTG+TGG 0.680359 tig0009259:-47179 Msa1346890:CDS
ATTGGATCAATGGATTGTCA+TGG 0.684189 tig0009259:-47189 Msa1346890:CDS
GGAACTACTGGAAAACCCAA+GGG 0.690505 tig0009259:-48772 Msa1346890:CDS
GAAGTGGTGTCACTAGCACA+CGG 0.733901 tig0009259:-51856 Msa1346890:CDS
AGTTAGCAATGAAAGCAGTG+AGG 0.758739 tig0009259:-49494 Msa1346890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAAAAAATAAA+AGG - tig0009259:48046-48065 Msa1346890:intron 0.0%
!!! TTTTTTAAAATTATTTTTGC+TGG - tig0009259:48115-48134 Msa1346890:intron 10.0%
!!! TTTTCAATTAAAATAAGTTA+AGG - tig0009259:51650-51669 Msa1346890:intron 10.0%
!! ATGTATATAGTCTTTATTAT+AGG + tig0009259:46532-46551 None:intergenic 15.0%
!! AAAAAAACTAATAAGTTAGT+TGG - tig0009259:47009-47028 Msa1346890:intron 15.0%
!! AAAAAACTAATAAGTTAGTT+GGG - tig0009259:47010-47029 Msa1346890:intron 15.0%
!! ATTTACTGTTATATTGTATT+GGG + tig0009259:47455-47474 None:intergenic 15.0%
!! TATTTACTGTTATATTGTAT+TGG + tig0009259:47456-47475 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + tig0009259:47520-47539 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + tig0009259:47521-47540 None:intergenic 15.0%
!! CTACTAAAAAAATTAGAATT+TGG - tig0009259:47723-47742 Msa1346890:intron 15.0%
!! ATTCTTATCAAGTAAAAATT+TGG - tig0009259:47815-47834 Msa1346890:intron 15.0%
!!! TATAGTAAACTTTTACTTAA+TGG - tig0009259:47843-47862 Msa1346890:intron 15.0%
!!! TTTTATTTTAAATAGCGTAA+TGG + tig0009259:48033-48052 None:intergenic 15.0%
!! AATGAAAAAAAGAAAAGAAA+TGG + tig0009259:49719-49738 None:intergenic 15.0%
!!! TTTGATGTTTTGATATTTTT+AGG - tig0009259:50191-50210 Msa1346890:intron 15.0%
!!! TAACAATTTTCATTTATCAA+AGG - tig0009259:50720-50739 Msa1346890:intron 15.0%
!!! AACAATTTTCATTTATCAAA+GGG - tig0009259:50721-50740 Msa1346890:intron 15.0%
!! ATCACTTTGCTAAATTATTA+TGG - tig0009259:46244-46263 Msa1346890:three_prime_UTR 20.0%
!!! TTTTTGCTTATATTAGTGAT+CGG + tig0009259:46471-46490 None:intergenic 20.0%
!! TAAGCAAAAATTCAAATTCT+AGG + tig0009259:46570-46589 None:intergenic 20.0%
!! TATTAAATCCAATTCATCTA+TGG - tig0009259:46615-46634 Msa1346890:intron 20.0%
!! AAAAACTAATAAGTTAGTTG+GGG - tig0009259:47011-47030 Msa1346890:intron 20.0%
!! AACTTATAATGTTGTTAATG+TGG - tig0009259:47228-47247 Msa1346890:CDS 20.0%
!! ACTTATAATGTTGTTAATGT+GGG - tig0009259:47229-47248 Msa1346890:CDS 20.0%
!!! GACACTTTTTTTTAGAAAAT+AGG + tig0009259:47386-47405 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + tig0009259:47496-47515 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + tig0009259:47519-47538 None:intergenic 20.0%
!! TATTGCCAAATAAAAAAAAG+AGG - tig0009259:47886-47905 Msa1346890:intron 20.0%
!! ATTATATGAGTTGTACTTAA+GGG + tig0009259:47921-47940 None:intergenic 20.0%
!! TATTATATGAGTTGTACTTA+AGG + tig0009259:47922-47941 None:intergenic 20.0%
!! TTAAATCCTAATCTATCATA+TGG - tig0009259:48366-48385 Msa1346890:CDS 20.0%
!!! AAATCATTTTGTTCTTTTTG+AGG + tig0009259:48613-48632 None:intergenic 20.0%
!!! TGATTTGAAACATAATCTAT+AGG - tig0009259:48627-48646 Msa1346890:intron 20.0%
!! AATGAAATAGATTATGTGAA+AGG + tig0009259:48659-48678 None:intergenic 20.0%
!!! AAAATGAAACATCATTTTGT+TGG + tig0009259:48806-48825 None:intergenic 20.0%
!!! AAAATGATGTTTCATTTTTG+AGG - tig0009259:48808-48827 Msa1346890:intron 20.0%
!!! AAGCTTAAAAAAGGATTTTA+TGG + tig0009259:48936-48955 None:intergenic 20.0%
!!! GATTTTTTCAAGCTTAAAAA+AGG + tig0009259:48945-48964 None:intergenic 20.0%
!! TTTCTTATAGAAATATCGTT+AGG - tig0009259:50008-50027 Msa1346890:intron 20.0%
!! ATCAAATTAGAACTTGATAA+AGG + tig0009259:50177-50196 None:intergenic 20.0%
!! TAGAAGATACACATATTTAT+AGG - tig0009259:51311-51330 Msa1346890:intron 20.0%
!! AAAAAACCTCAATATATTTC+TGG + tig0009259:51928-51947 None:intergenic 20.0%
!!! AGAAATATATTGAGGTTTTT+TGG - tig0009259:51927-51946 Msa1346890:CDS 20.0%
!! AATTTATCAACCAAACAAAT+TGG + tig0009259:51957-51976 None:intergenic 20.0%
!! TTTTTGCTTATATTAGTGAC+CGG - tig0009259:46580-46599 Msa1346890:intron 25.0%
! TTTAATAATCATACATCCTC+CGG + tig0009259:46602-46621 None:intergenic 25.0%
! TTTATGTGAGAGATATTTCT+TGG - tig0009259:46708-46727 Msa1346890:CDS 25.0%
!!! TCTTTTTTCTCTCTTTTCAT+TGG + tig0009259:46915-46934 None:intergenic 25.0%
! AAAACTAATAAGTTAGTTGG+GGG - tig0009259:47012-47031 Msa1346890:intron 25.0%
! GTTCATAAACTACCAATTAA+CGG + tig0009259:47211-47230 None:intergenic 25.0%
! CTTATAATGTTGTTAATGTG+GGG - tig0009259:47230-47249 Msa1346890:CDS 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + tig0009259:47408-47427 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + tig0009259:47409-47428 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + tig0009259:47497-47516 None:intergenic 25.0%
! TATAAACTTACACACATAAG+TGG + tig0009259:47681-47700 None:intergenic 25.0%
!!! TTTTTAGTAGATAGACGAAA+TGG + tig0009259:47713-47732 None:intergenic 25.0%
! TGCATATTATGATAAGACAA+TGG - tig0009259:47746-47765 Msa1346890:intron 25.0%
! TTTACTTGATAAGAATAACC+TGG + tig0009259:47811-47830 None:intergenic 25.0%
!!! AAAGGCCTCTTTTTTTTATT+TGG + tig0009259:47894-47913 None:intergenic 25.0%
! TTATTAGCTATTGCATTTGT+TGG - tig0009259:48511-48530 Msa1346890:intron 25.0%
!!! ATGGACAGTTTTTTTTACTT+TGG + tig0009259:48917-48936 None:intergenic 25.0%
! GAAGAACAATAATAGCAATA+AGG + tig0009259:48972-48991 None:intergenic 25.0%
!! TCTAGAATTTAACTACTCAT+GGG - tig0009259:49034-49053 Msa1346890:intron 25.0%
! CAGATAATAATTTGAGAAAG+TGG - tig0009259:49240-49259 Msa1346890:intron 25.0%
! TAGTGTTCAAATATTACTCT+AGG - tig0009259:49384-49403 Msa1346890:CDS 25.0%
! AGTGTTCAAATATTACTCTA+GGG - tig0009259:49385-49404 Msa1346890:CDS 25.0%
! AACCAATAAGTAACATAAAC+CGG + tig0009259:49575-49594 None:intergenic 25.0%
! TACCATTATATCATAACATG+AGG - tig0009259:49604-49623 Msa1346890:intron 25.0%
! AACCTCATGTTATGATATAA+TGG + tig0009259:49609-49628 None:intergenic 25.0%
!! TTTTTCATTTGTTCTCTAAC+AGG - tig0009259:49730-49749 Msa1346890:CDS 25.0%
! ACTAGTTGTTTATCCAAAAA+GGG - tig0009259:50151-50170 Msa1346890:intron 25.0%
! TTAGTCAATAAATTTCCTCT+AGG + tig0009259:50369-50388 None:intergenic 25.0%
!! TAGAGGAAATTTATTGACTA+AGG - tig0009259:50368-50387 Msa1346890:intron 25.0%
!! AGAGGAAATTTATTGACTAA+GGG - tig0009259:50369-50388 Msa1346890:intron 25.0%
!! TATAAGTTGGAAACAGTTTA+TGG + tig0009259:50479-50498 None:intergenic 25.0%
! ACAGCTTATATGAAAATAGT+TGG - tig0009259:50529-50548 Msa1346890:intron 25.0%
! ATTGAGCTATTTATTCAAGT+AGG - tig0009259:50599-50618 Msa1346890:intron 25.0%
! TTGAGCTATTTATTCAAGTA+GGG - tig0009259:50600-50619 Msa1346890:intron 25.0%
! AAAGTCGAGTAAGATTATAT+AGG - tig0009259:51133-51152 Msa1346890:intron 25.0%
! ACAAAGTTTAATCCTTCAAA+AGG - tig0009259:51210-51229 Msa1346890:intron 25.0%
! CAAAGTTTAATCCTTCAAAA+GGG - tig0009259:51211-51230 Msa1346890:intron 25.0%
!! TGAACATGTTATTTGTTTGT+AGG - tig0009259:51353-51372 Msa1346890:intron 25.0%
! GTATTGTTGAAGATTCTTTA+TGG + tig0009259:51535-51554 None:intergenic 25.0%
!! AACAAACATGAGTTTTTGTT+TGG + tig0009259:51589-51608 None:intergenic 25.0%
! TACCAAAGATATTCATTGAA+TGG - tig0009259:51713-51732 Msa1346890:intron 25.0%
! TAGAAAACTACACAAATGTT+TGG - tig0009259:51864-51883 Msa1346890:CDS 25.0%
TAAGCAAAAATCCACTTTCT+AGG - tig0009259:46481-46500 Msa1346890:CDS 30.0%
TATTGAATGAACCTAGAAAG+TGG + tig0009259:46495-46514 None:intergenic 30.0%
AAAAACTGCCATAGATGAAT+TGG + tig0009259:46626-46645 None:intergenic 30.0%
CTAATATGAGACTCTTTCAA+TGG + tig0009259:46661-46680 None:intergenic 30.0%
GTCAAAAAGTTGTCACAAAA+TGG + tig0009259:46820-46839 None:intergenic 30.0%
! TTTTCATTGGCCAAAAACAA+TGG + tig0009259:46902-46921 None:intergenic 30.0%
CCAATTAACGGAAAATACTT+GGG + tig0009259:47199-47218 None:intergenic 30.0%
ACCAATTAACGGAAAATACT+TGG + tig0009259:47200-47219 None:intergenic 30.0%
AGAAAATAGGTCAGTTATTC+CGG + tig0009259:47373-47392 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + tig0009259:47512-47531 None:intergenic 30.0%
GACAAAATGTCGAAATTGTT+AGG - tig0009259:47619-47638 Msa1346890:intron 30.0%
AAATGTCGAAATTGTTAGGT+CGG - tig0009259:47623-47642 Msa1346890:intron 30.0%
TAGTCACACTAATAGAAAGT+AGG - tig0009259:47785-47804 Msa1346890:intron 30.0%
GTTGTACTTAAGGGATAAAA+AGG + tig0009259:47912-47931 None:intergenic 30.0%
GACATTCCATATGATAGATT+AGG + tig0009259:48375-48394 None:intergenic 30.0%
! TCAGTGATTTGTATCTAGAA+TGG - tig0009259:48488-48507 Msa1346890:intron 30.0%
TGAGGTAAAAATACAAGTGA+GGG + tig0009259:48595-48614 None:intergenic 30.0%
TTGAGGTAAAAATACAAGTG+AGG + tig0009259:48596-48615 None:intergenic 30.0%
!! ATGATGTTTCATTTTTGAGG+TGG - tig0009259:48811-48830 Msa1346890:intron 30.0%
TGTTTGTAAAATCTGAGGAA+GGG + tig0009259:48854-48873 None:intergenic 30.0%
TTGTTTGTAAAATCTGAGGA+AGG + tig0009259:48855-48874 None:intergenic 30.0%
! GATTTTACAAACAAGTGGAA+TGG - tig0009259:48861-48880 Msa1346890:intron 30.0%
CATGAGTAGTTAAATTCTAG+AGG + tig0009259:49035-49054 None:intergenic 30.0%
!! CTCTAGAATTTAACTACTCA+TGG - tig0009259:49033-49052 Msa1346890:intron 30.0%
TTGACTACCTCAAAAAAACA+TGG - tig0009259:49108-49127 Msa1346890:intron 30.0%
!!! CTGATATCCATGTTTTTTTG+AGG + tig0009259:49118-49137 None:intergenic 30.0%
! ATCCGGTTTATGTTACTTAT+TGG - tig0009259:49570-49589 Msa1346890:intron 30.0%
! GCTAATTTTGCATCAAACTT+CGG + tig0009259:49845-49864 None:intergenic 30.0%
TTTGATGCAAAATTAGCTGT+TGG - tig0009259:49848-49867 Msa1346890:intron 30.0%
TTGATGCAAAATTAGCTGTT+GGG - tig0009259:49849-49868 Msa1346890:intron 30.0%
CCTAACAATAGAAATAAGAC+TGG + tig0009259:49927-49946 None:intergenic 30.0%
!! CCAGTCTTATTTCTATTGTT+AGG - tig0009259:49924-49943 Msa1346890:intron 30.0%
!! GTTTTGTTCCTATTTGAAAC+TGG + tig0009259:49956-49975 None:intergenic 30.0%
!! GTTTTGTTCCTATTTGAAAC+TGG + tig0009259:49956-49975 None:intergenic 30.0%
CACTAGTTGTTTATCCAAAA+AGG - tig0009259:50150-50169 Msa1346890:intron 30.0%
ACTGTCAAGAAAATACTCAA+TGG - tig0009259:50241-50260 Msa1346890:intron 30.0%
GGTGATCTTATGATATAAGT+TGG + tig0009259:50492-50511 None:intergenic 30.0%
ACTTATATCATAAGATCACC+AGG - tig0009259:50492-50511 Msa1346890:intron 30.0%
! TTGGACATTATCTTGTCTTT+TGG - tig0009259:50548-50567 Msa1346890:intron 30.0%
TCAATCAAGCACTTATGTAT+AGG + tig0009259:50584-50603 None:intergenic 30.0%
TTACATGTAGCAAGTTCATT+TGG - tig0009259:50685-50704 Msa1346890:intron 30.0%
TCTTCACCATATGTTTGAAA+AGG + tig0009259:50816-50835 None:intergenic 30.0%
!! TGGTTGATGAATGATATGTT+TGG + tig0009259:50844-50863 None:intergenic 30.0%
!!! CAGGAAGAATTTTAACTAGA+GGG - tig0009259:50928-50947 Msa1346890:intron 30.0%
ACATTTAATGCTCAGGTATT+GGG - tig0009259:50953-50972 Msa1346890:intron 30.0%
! TTGATTTGATGTGTTTGTGA+GGG + tig0009259:50985-51004 None:intergenic 30.0%
!! TTTGATTTGATGTGTTTGTG+AGG + tig0009259:50986-51005 None:intergenic 30.0%
TCACAAACACATCAAATCAA+AGG - tig0009259:50985-51004 Msa1346890:intron 30.0%
TATATAGGCAGTAAAACACT+TGG - tig0009259:51148-51167 Msa1346890:intron 30.0%
!!! ACTTGGAATATTTTTAGTGC+TGG - tig0009259:51165-51184 Msa1346890:intron 30.0%
TATGTGTATCTTCTAATGCA+AGG + tig0009259:51306-51325 None:intergenic 30.0%
! ATTGCAAGAGTTGTTATTGT+GGG - tig0009259:51405-51424 Msa1346890:intron 30.0%
GTCTGGAAAATAATTTAAGC+AGG - tig0009259:51556-51575 Msa1346890:intron 30.0%
!!! TATTTTTTTTTCCTCCCTTC+AGG - tig0009259:51683-51702 Msa1346890:intron 30.0%
TTTGGTATCTTAAACCTGAA+GGG + tig0009259:51700-51719 None:intergenic 30.0%
CTCCATTCAATGAATATCTT+TGG + tig0009259:51718-51737 None:intergenic 30.0%
!! AGTTTTCTAGAAAACAGGAT+GGG + tig0009259:51853-51872 None:intergenic 30.0%
!! TAGTTTTCTAGAAAACAGGA+TGG + tig0009259:51854-51873 None:intergenic 30.0%
!! TGTGTAGTTTTCTAGAAAAC+AGG + tig0009259:51858-51877 None:intergenic 30.0%
GGAATTATACTTTCAGATAG+AGG - tig0009259:51885-51904 Msa1346890:CDS 30.0%
TTCTGTCCAGAAATATATTG+AGG - tig0009259:51919-51938 Msa1346890:CDS 30.0%
!!! TTTTGGAACACCAATTTGTT+TGG - tig0009259:51944-51963 Msa1346890:CDS 30.0%
TGAGTCGATTGTTAACTTTC+CGG - tig0009259:46285-46304 Msa1346890:three_prime_UTR 35.0%
TGCTTATATTAGTGATCGGA+GGG + tig0009259:46467-46486 None:intergenic 35.0%
TTGCTTATATTAGTGATCGG+AGG + tig0009259:46468-46487 None:intergenic 35.0%
! TTCTCTCTCTCCATTGTTTT+TGG - tig0009259:46889-46908 Msa1346890:intron 35.0%
ACACATTGTCACACAACATT+TGG - tig0009259:47087-47106 Msa1346890:intron 35.0%
CACATTGTCACACAACATTT+GGG - tig0009259:47088-47107 Msa1346890:intron 35.0%
ACAACACATACAACACATCT+GGG - tig0009259:47115-47134 Msa1346890:intron 35.0%
GTCACCGTGACATTAAATTT+GGG + tig0009259:47167-47186 None:intergenic 35.0%
AGTCACCGTGACATTAAATT+TGG + tig0009259:47168-47187 None:intergenic 35.0%
! CCCAAGTATTTTCCGTTAAT+TGG - tig0009259:47196-47215 Msa1346890:CDS 35.0%
TTTGTTGCAGATTCATTGCT+CGG + tig0009259:47318-47337 None:intergenic 35.0%
GAAAATAGGTCAGTTATTCC+GGG + tig0009259:47372-47391 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - tig0009259:47542-47561 Msa1346890:intron 35.0%
CCAAAGTAGGTCAATTAAAC+CGG - tig0009259:47555-47574 Msa1346890:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG - tig0009259:47556-47575 Msa1346890:intron 35.0%
AAACTTACACACATAAGTGG+AGG + tig0009259:47678-47697 None:intergenic 35.0%
TTTCATTGACATGTGACTTG+TGG - tig0009259:47947-47966 Msa1346890:CDS 35.0%
!! AGTTCAACTGGTTTGACTTA+AGG + tig0009259:48248-48267 None:intergenic 35.0%
CTGAAGTTAGAAAGTTCAAC+TGG + tig0009259:48260-48279 None:intergenic 35.0%
CAATTCTCATCTCAATAGGT+TGG + tig0009259:48316-48335 None:intergenic 35.0%
CAACCTATTGAGATGAGAAT+TGG - tig0009259:48314-48333 Msa1346890:CDS 35.0%
CTACCAATTCTCATCTCAAT+AGG + tig0009259:48320-48339 None:intergenic 35.0%
! TTAGCTATTGCATTTGTTGG+AGG - tig0009259:48514-48533 Msa1346890:intron 35.0%
TGCTCCTCTAAATTATCGTT+GGG - tig0009259:48543-48562 Msa1346890:intron 35.0%
CTTACCCAACGATAATTTAG+AGG + tig0009259:48550-48569 None:intergenic 35.0%
!!! TCTCCTAAAGAGTTTTGAAG+AGG - tig0009259:48704-48723 Msa1346890:CDS 35.0%
TTGCCTCTTCAAAACTCTTT+AGG + tig0009259:48710-48729 None:intergenic 35.0%
TCATCAATCACTAACATCAC+TGG + tig0009259:48756-48775 None:intergenic 35.0%
GTTTGTAAAATCTGAGGAAG+GGG + tig0009259:48853-48872 None:intergenic 35.0%
CCACTTGTTTGTAAAATCTG+AGG + tig0009259:48859-48878 None:intergenic 35.0%
! CCTCAGATTTTACAAACAAG+TGG - tig0009259:48856-48875 Msa1346890:intron 35.0%
TTACAAACAAGTGGAATGGT+AGG - tig0009259:48865-48884 Msa1346890:intron 35.0%
AATGAAACCACATGTTGTGT+CGG - tig0009259:49271-49290 Msa1346890:intron 35.0%
ACTGTATGATCAAAGCTTCA+TGG + tig0009259:49490-49509 None:intergenic 35.0%
ATATCCAACTATGGCAATCT+TGG + tig0009259:49519-49538 None:intergenic 35.0%
ATCCTCACTATATCCAACTA+TGG + tig0009259:49528-49547 None:intergenic 35.0%
AACATAAACCGGATGTAACA+GGG + tig0009259:49564-49583 None:intergenic 35.0%
TAACATAAACCGGATGTAAC+AGG + tig0009259:49565-49584 None:intergenic 35.0%
AAACCACCAATGTGACATAA+TGG + tig0009259:49773-49792 None:intergenic 35.0%
TGATGCAAAATTAGCTGTTG+GGG - tig0009259:49850-49869 Msa1346890:intron 35.0%
GGTATGTTCCAGTTTCAAAT+AGG - tig0009259:49945-49964 Msa1346890:intron 35.0%
GGTATGTTCCAGTTTCAAAT+AGG - tig0009259:49945-49964 Msa1346890:intron 35.0%
! AACTTGATAAAGGCCCTTTT+TGG + tig0009259:50167-50186 None:intergenic 35.0%
GTCAAGAAAATACTCAATGG+AGG - tig0009259:50244-50263 Msa1346890:intron 35.0%
AAGAAAATACTCAATGGAGG+TGG - tig0009259:50247-50266 Msa1346890:intron 35.0%
CACTAGCATATTCTTCCATA+AGG - tig0009259:50297-50316 Msa1346890:intron 35.0%
!! CTGAAATAAGCTTAGCCTTA+TGG + tig0009259:50315-50334 None:intergenic 35.0%
GCTAAGCTTATTTCAGCTTA+TGG - tig0009259:50319-50338 Msa1346890:intron 35.0%
AGCTTATTTCAGCTTATGGT+AGG - tig0009259:50323-50342 Msa1346890:intron 35.0%
AATTTCCTCTAGGCAACATT+GGG + tig0009259:50359-50378 None:intergenic 35.0%
AAATTTCCTCTAGGCAACAT+TGG + tig0009259:50360-50379 None:intergenic 35.0%
AAACTGTTTGAGAGACCTTA+CGG - tig0009259:50435-50454 Msa1346890:intron 35.0%
! TGTCATAAGTTGTTTCCGTA+AGG + tig0009259:50453-50472 None:intergenic 35.0%
!! CTGTTTTTCACAAGTTATCC+TGG + tig0009259:50513-50532 None:intergenic 35.0%
! AGCCATCCTTTTCAAACATA+TGG - tig0009259:50807-50826 Msa1346890:intron 35.0%
CACCATATGTTTGAAAAGGA+TGG + tig0009259:50812-50831 None:intergenic 35.0%
CATATCATTCATCAACCACA+AGG - tig0009259:50846-50865 Msa1346890:intron 35.0%
CATATCTTCAGTTCTACATG+AGG + tig0009259:50894-50913 None:intergenic 35.0%
GAACTGAAGATATGCAAAGA+CGG - tig0009259:50900-50919 Msa1346890:intron 35.0%
!!! GCAGGAAGAATTTTAACTAG+AGG - tig0009259:50927-50946 Msa1346890:intron 35.0%
CAATACCTGAGCATTAAATG+TGG + tig0009259:50954-50973 None:intergenic 35.0%
CACATTTAATGCTCAGGTAT+TGG - tig0009259:50952-50971 Msa1346890:intron 35.0%
CAAATCAAAGGAATGAAGTC+TGG - tig0009259:50997-51016 Msa1346890:intron 35.0%
! AATGAAGTCTGGTTTGATAC+AGG - tig0009259:51008-51027 Msa1346890:intron 35.0%
!! ATTGGATCAATGGATTGTCA+TGG - tig0009259:51035-51054 Msa1346890:intron 35.0%
TCGACTTTATTACCTCTTCA+GGG + tig0009259:51121-51140 None:intergenic 35.0%
ATGTCACACTAGACATTTCT+AGG - tig0009259:51271-51290 Msa1346890:intron 35.0%
CAATTCTACTAGAACATCCA+GGG - tig0009259:51382-51401 Msa1346890:intron 35.0%
! GATTGCAAGAGTTGTTATTG+TGG - tig0009259:51404-51423 Msa1346890:intron 35.0%
GTATCCAACCAAGAGAAAAT+TGG - tig0009259:51466-51485 Msa1346890:intron 35.0%
! ATTGCCAATTTTCTCTTGGT+TGG + tig0009259:51473-51492 None:intergenic 35.0%
AACCAAGAGAAAATTGGCAA+TGG - tig0009259:51472-51491 Msa1346890:intron 35.0%
! AACCATTGCCAATTTTCTCT+TGG + tig0009259:51477-51496 None:intergenic 35.0%
GAATCTTCAACAATACTGTC+TGG - tig0009259:51539-51558 Msa1346890:intron 35.0%
CTTTGGTATCTTAAACCTGA+AGG + tig0009259:51701-51720 None:intergenic 35.0%
CTTTGCATAGTAATCTCTGA+AGG - tig0009259:51815-51834 Msa1346890:CDS 35.0%
TTGCTTATATTAGTGACCGG+AGG - tig0009259:46583-46602 Msa1346890:intron 40.0%
CACAACACATACAACACATC+TGG - tig0009259:47114-47133 Msa1346890:intron 40.0%
CACAAATGTGTTGTGTTGTG+TGG + tig0009259:47141-47160 None:intergenic 40.0%
CACAACACAACACATTTGTG+TGG - tig0009259:47141-47160 Msa1346890:CDS 40.0%
GTGGCCCAAATTTAATGTCA+CGG - tig0009259:47160-47179 Msa1346890:CDS 40.0%
CCGGTTTAATTGACCTACTT+TGG + tig0009259:47558-47577 None:intergenic 40.0%
ACACTAATAGAAAGTAGGCC+AGG - tig0009259:47790-47809 Msa1346890:intron 40.0%
CTGCTCCTCTAAATTATCGT+TGG - tig0009259:48542-48561 Msa1346890:intron 40.0%
AGTTAGCAATGAAAGCAGTG+AGG - tig0009259:48730-48749 Msa1346890:CDS 40.0%
TTGATGAGAGCTGCTATTCA+TGG - tig0009259:48769-48788 Msa1346890:CDS 40.0%
!! TTTGAGGTGGCATGTTTTGT+TGG - tig0009259:48824-48843 Msa1346890:intron 40.0%
TGACTCCAGGAATACTTAAG+AGG - tig0009259:48997-49016 Msa1346890:intron 40.0%
GTCATAATCTGCTTCACTTC+AGG - tig0009259:49071-49090 Msa1346890:intron 40.0%
! AATCTGCTTCACTTCAGGTT+AGG - tig0009259:49076-49095 Msa1346890:intron 40.0%
! ACTTCATATTGAAGGCGTGT+CGG + tig0009259:49322-49341 None:intergenic 40.0%
ACGCCTTCAATATGAAGTGT+CGG - tig0009259:49324-49343 Msa1346890:intron 40.0%
TCACCGACACTTCATATTGA+AGG + tig0009259:49330-49349 None:intergenic 40.0%
TTGTTGTGTGCTTGACTACT+AGG - tig0009259:49431-49450 Msa1346890:CDS 40.0%
AACTATGGCAATCTTGGCTA+GGG + tig0009259:49513-49532 None:intergenic 40.0%
TGCCATAGTTGGATATAGTG+AGG - tig0009259:49523-49542 Msa1346890:intron 40.0%
ACTGCTCCATTATGTCACAT+TGG - tig0009259:49764-49783 Msa1346890:intron 40.0%
CAAACTTCGGCATGAATACA+TGG + tig0009259:49832-49851 None:intergenic 40.0%
! ATAAGACTGGTCATCATTGC+AGG + tig0009259:49914-49933 None:intergenic 40.0%
!! TTTTTAGGCGCAAAGAAACC+TGG - tig0009259:50206-50225 Msa1346890:intron 40.0%
CTTTGATAAGCTCAAACGAG+AGG + tig0009259:50276-50295 None:intergenic 40.0%
!!! TGGCTGATGGTTTTTTGCAT+CGG + tig0009259:50792-50811 None:intergenic 40.0%
TGTTTGAAAAGGATGGCTGA+TGG + tig0009259:50805-50824 None:intergenic 40.0%
TGGTTTGATACAGGTGACAT+TGG - tig0009259:51017-51036 Msa1346890:intron 40.0%
TACAGGTGACATTGGATCAA+TGG - tig0009259:51025-51044 Msa1346890:intron 40.0%
TGGATTGTCATGGTAACTTG+TGG - tig0009259:51045-51064 Msa1346890:intron 40.0%
AGAGAACATTTACCCTGAAG+AGG - tig0009259:51106-51125 Msa1346890:intron 40.0%
CTCGACTTTATTACCTCTTC+AGG + tig0009259:51122-51141 None:intergenic 40.0%
! CACTTGTGTTTCCCTTTTGA+AGG + tig0009259:51225-51244 None:intergenic 40.0%
GCAATTCTACTAGAACATCC+AGG - tig0009259:51381-51400 Msa1346890:intron 40.0%
ATAACAACTCTTGCAATCCC+TGG + tig0009259:51402-51421 None:intergenic 40.0%
ATTTCTGTGAAACGTGCATC+TGG + tig0009259:51435-51454 None:intergenic 40.0%
AGATGCACGTTTCACAGAAA+TGG - tig0009259:51434-51453 Msa1346890:intron 40.0%
!!! GTCTCTTCTTATTTTTCCCG+TGG + tig0009259:51761-51780 None:intergenic 40.0%
TAGCCATCTCTGCTTACAAC+AGG - tig0009259:46426-46445 Msa1346890:CDS 45.0%
GTACCTGTTGTAAGCAGAGA+TGG + tig0009259:46432-46451 None:intergenic 45.0%
CTTGGGTGACATTATGTCAC+CGG - tig0009259:47040-47059 Msa1346890:intron 45.0%
TTGGGTGACATTATGTCACC+GGG - tig0009259:47041-47060 Msa1346890:intron 45.0%
TGTCACCGGGACATTAAATC+TGG - tig0009259:47054-47073 Msa1346890:intron 45.0%
GTCACCGGGACATTAAATCT+GGG - tig0009259:47055-47074 Msa1346890:intron 45.0%
GTGTGACAATGTGTGTTGTG+TGG + tig0009259:47081-47100 None:intergenic 45.0%
GTTGTTAATGTGGGGTCACT+AGG - tig0009259:47238-47257 Msa1346890:CDS 45.0%
TTAATGTGGGGTCACTAGGA+TGG - tig0009259:47242-47261 Msa1346890:CDS 45.0%
AAAAATTACTCCCTCCGTCC+CGG - tig0009259:47351-47370 Msa1346890:CDS 45.0%
ATAGGTCAGTTATTCCGGGA+CGG + tig0009259:47368-47387 None:intergenic 45.0%
GTAGGTCAATTAAACCGGGA+CGG - tig0009259:47560-47579 Msa1346890:intron 45.0%
GTCAGTTGAGCTATGACTTG+TGG + tig0009259:47602-47621 None:intergenic 45.0%
! ACACATAAGTGGAGGTACAG+GGG + tig0009259:47670-47689 None:intergenic 45.0%
! CACACATAAGTGGAGGTACA+GGG + tig0009259:47671-47690 None:intergenic 45.0%
! ACACACATAAGTGGAGGTAC+AGG + tig0009259:47672-47691 None:intergenic 45.0%
! TGACATGTGACTTGTGGACA+CGG - tig0009259:47953-47972 Msa1346890:CDS 45.0%
!! TGTTCTTCAGTGTTGACTCC+AGG - tig0009259:48984-49003 Msa1346890:intron 45.0%
TGACGCCTCTTAAGTATTCC+TGG + tig0009259:49005-49024 None:intergenic 45.0%
CAGATTATGACAGCTCCTTC+AGG + tig0009259:49062-49081 None:intergenic 45.0%
GCTTGACTACTAGGAACTAC+TGG - tig0009259:49440-49459 Msa1346890:CDS 45.0%
AGGAACTACTGGAAAACCCA+AGG - tig0009259:49451-49470 Msa1346890:CDS 45.0%
GGAACTACTGGAAAACCCAA+GGG - tig0009259:49452-49471 Msa1346890:CDS 45.0%
TGGCTTATTGTGACTCCCTT+GGG + tig0009259:49470-49489 None:intergenic 45.0%
ATGGCTTATTGTGACTCCCT+TGG + tig0009259:49471-49490 None:intergenic 45.0%
CAACTATGGCAATCTTGGCT+AGG + tig0009259:49514-49533 None:intergenic 45.0%
CTAGCCAAGATTGCCATAGT+TGG - tig0009259:49512-49531 Msa1346890:CDS 45.0%
ATGCCATTCCCTGTTACATC+CGG - tig0009259:49553-49572 Msa1346890:intron 45.0%
AAACCGGATGTAACAGGGAA+TGG + tig0009259:49559-49578 None:intergenic 45.0%
GCTGAAACATTCACTCGTCT+CGG - tig0009259:49678-49697 Msa1346890:intron 45.0%
GCTCCATTATGTCACATTGG+TGG - tig0009259:49767-49786 Msa1346890:intron 45.0%
TTTGACCCAATGTTGCCTAG+AGG - tig0009259:50351-50370 Msa1346890:intron 45.0%
! CAACCACAAGGTGTTTGTGT+TGG - tig0009259:50858-50877 Msa1346890:intron 45.0%
TTGCCAACACAAACACCTTG+TGG + tig0009259:50864-50883 None:intergenic 45.0%
! ACAAGGTGTTTGTGTTGGCA+AGG - tig0009259:50863-50882 Msa1346890:intron 45.0%
ACAAATGGTCGCATCAAGAG+TGG - tig0009259:51080-51099 Msa1346890:intron 45.0%
GGTATCTTAAACCTGAAGGG+AGG + tig0009259:51697-51716 None:intergenic 45.0%
!! ATTTTTCCCGTGGTAGTGAG+TGG + tig0009259:51751-51770 None:intergenic 45.0%
AAGAAGAGACCAAGTCCGAA+AGG - tig0009259:51771-51790 Msa1346890:intron 45.0%
AACTTTCCGGCGAGATTTCC+CGG - tig0009259:46298-46317 Msa1346890:three_prime_UTR 50.0%
TTGTTTCCGGCAATGGTCAC+CGG + tig0009259:46320-46339 None:intergenic 50.0%
!! GAAGTGGTGTCACTAGCACA+CGG - tig0009259:46368-46387 Msa1346890:three_prime_UTR 50.0%
GAGATGGCTACAACATCACC+TGG + tig0009259:46416-46435 None:intergenic 50.0%
!! AGTTAGTTGGGGGAAGCACT+TGG - tig0009259:47022-47041 Msa1346890:intron 50.0%
!! GTTAGTTGGGGGAAGCACTT+GGG - tig0009259:47023-47042 Msa1346890:intron 50.0%
GTGGCCCAGATTTAATGTCC+CGG + tig0009259:47062-47081 None:intergenic 50.0%
GTCAATTAAACCGGGACGGA+GGG - tig0009259:47564-47583 Msa1346890:intron 50.0%
AAATTCTACTCCCTCCGTCC+CGG + tig0009259:47577-47596 None:intergenic 50.0%
GTTAGGTCGGATGCCATGAT+CGG - tig0009259:47636-47655 Msa1346890:intron 50.0%
TTAGGTCGGATGCCATGATC+GGG - tig0009259:47637-47656 Msa1346890:intron 50.0%
AACTACTCATGGGCACCTGA+AGG - tig0009259:49044-49063 Msa1346890:intron 50.0%
! AACCACATGTTGTGTCGGTG+TGG - tig0009259:49276-49295 Msa1346890:intron 50.0%
! TGGTGGTTTGTCATCAGCCA+TGG - tig0009259:49784-49803 Msa1346890:intron 50.0%
ATCAGCCATGGCCATGCTTA+TGG - tig0009259:49796-49815 Msa1346890:intron 50.0%
TCCAACCATAAGCATGGCCA+TGG + tig0009259:49804-49823 None:intergenic 50.0%
ATGGCCATGCTTATGGTTGG+AGG - tig0009259:49803-49822 Msa1346890:intron 50.0%
GCAACCTCCAACCATAAGCA+TGG + tig0009259:49810-49829 None:intergenic 50.0%
AGGCGCAAAGAAACCTGGAA+AGG - tig0009259:50211-50230 Msa1346890:intron 50.0%
GGCGCAAAGAAACCTGGAAA+GGG - tig0009259:50212-50231 Msa1346890:intron 50.0%
GCGCAAAGAAACCTGGAAAG+GGG - tig0009259:50213-50232 Msa1346890:intron 50.0%
CGCAAAGAAACCTGGAAAGG+GGG - tig0009259:50214-50233 Msa1346890:intron 50.0%
GCATCGGATCATACAGCGTT+AGG + tig0009259:50776-50795 None:intergenic 50.0%
ATATGCAAAGACGGTGACGC+AGG - tig0009259:50909-50928 Msa1346890:intron 50.0%
GAGGGCCACATTTAATGCTC+AGG - tig0009259:50946-50965 Msa1346890:intron 50.0%
! CATGGTAACTTGTGGCTCCT+TGG - tig0009259:51053-51072 Msa1346890:intron 50.0%
TGGCTCCTTGGACGTACAAA+TGG - tig0009259:51065-51084 Msa1346890:intron 50.0%
TGCGACCATTTGTACGTCCA+AGG + tig0009259:51073-51092 None:intergenic 50.0%
AATGGTCGCATCAAGAGTGG+CGG - tig0009259:51083-51102 Msa1346890:intron 50.0%
! GCCTTTTCCACTCACTACCA+CGG - tig0009259:51741-51760 Msa1346890:intron 50.0%
! CCTTTTCCACTCACTACCAC+GGG - tig0009259:51742-51761 Msa1346890:intron 50.0%
AAGAGACCAAGTCCGAAAGG+AGG - tig0009259:51774-51793 Msa1346890:intron 50.0%
ACAGAACCTCCTTTCGGACT+TGG + tig0009259:51783-51802 None:intergenic 50.0%
GCTCAGACAGAACCTCCTTT+CGG + tig0009259:51789-51808 None:intergenic 50.0%
GATTTCCCGGTGACCATTGC+CGG - tig0009259:46311-46330 Msa1346890:three_prime_UTR 55.0%
TGTTTCCGGCAATGGTCACC+GGG + tig0009259:46319-46338 None:intergenic 55.0%
! CTTGCGGTTGTTTCCGGCAA+TGG + tig0009259:46327-46346 None:intergenic 55.0%
! CCCTGTCTTGCGGTTGTTTC+CGG + tig0009259:46333-46352 None:intergenic 55.0%
CCGGAAACAACCGCAAGACA+GGG - tig0009259:46330-46349 Msa1346890:three_prime_UTR 55.0%
AGCACACGGTCTTCTCCAGT+TGG - tig0009259:46382-46401 Msa1346890:three_prime_UTR 55.0%
GCACACGGTCTTCTCCAGTT+GGG - tig0009259:46383-46402 Msa1346890:three_prime_UTR 55.0%
GTCAGTTATTCCGGGACGGA+GGG + tig0009259:47364-47383 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG - tig0009259:47563-47582 Msa1346890:intron 55.0%
TAGGTCGGATGCCATGATCG+GGG - tig0009259:47638-47657 Msa1346890:intron 55.0%
GCCATGGCCATGCTTATGGT+TGG - tig0009259:49800-49819 Msa1346890:intron 55.0%
GACAGTTTCTCCCCCTTTCC+AGG + tig0009259:50227-50246 None:intergenic 55.0%
! CCCGTGGTAGTGAGTGGAAA+AGG + tig0009259:51745-51764 None:intergenic 55.0%
TGGTCACCGGGAAATCTCGC+CGG + tig0009259:46307-46326 None:intergenic 60.0%
GCCGGAAACAACCGCAAGAC+AGG - tig0009259:46329-46348 Msa1346890:three_prime_UTR 60.0%
CCAACTGCTGCCCTGTCTTG+CGG + tig0009259:46343-46362 None:intergenic 60.0%
CAAGACAGGGCAGCAGTTGG+TGG - tig0009259:46343-46362 Msa1346890:three_prime_UTR 60.0%
!! GCAGCAGTTGGTGGAGGAAG+TGG - tig0009259:46352-46371 Msa1346890:three_prime_UTR 60.0%
! CTCCAGTTGGGTGTCACACC+AGG - tig0009259:46395-46414 Msa1346890:exon 60.0%
CACCTGGTGTGACACCCAAC+TGG + tig0009259:46400-46419 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG + tig0009259:47365-47384 None:intergenic 60.0%
AGGGGTTCGAACCCCGATCA+TGG + tig0009259:47652-47671 None:intergenic 60.0%
CGCCACACCGACACAACATG+TGG + tig0009259:49281-49300 None:intergenic 60.0%
! TGTTGTGTCGGTGTGGCGTC+AGG - tig0009259:49283-49302 Msa1346890:intron 60.0%
CCGCAAGACAGGGCAGCAGT+TGG - tig0009259:46340-46359 Msa1346890:three_prime_UTR 65.0%
!! GACAGGGCAGCAGTTGGTGG+AGG - tig0009259:46346-46365 Msa1346890:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
tig0009259 gene 46201 52045 46201 ID=Msa1346890;Name=Msa1346890
tig0009259 mRNA 46201 52045 46201 ID=Msa1346890-mRNA-1;Parent=Msa1346890;Name=Msa1346890-mRNA-1;_AED=0.20;_eAED=0.20;_QI=62|1|1|1|1|1|10|211|554
tig0009259 exon 46201 46541 46201 ID=Msa1346890-mRNA-1:exon:5713;Parent=Msa1346890-mRNA-1
tig0009259 exon 46669 46871 46669 ID=Msa1346890-mRNA-1:exon:5712;Parent=Msa1346890-mRNA-1
tig0009259 exon 47119 47504 47119 ID=Msa1346890-mRNA-1:exon:5711;Parent=Msa1346890-mRNA-1
tig0009259 exon 47906 48033 47906 ID=Msa1346890-mRNA-1:exon:5710;Parent=Msa1346890-mRNA-1
tig0009259 exon 48301 48494 48301 ID=Msa1346890-mRNA-1:exon:5709;Parent=Msa1346890-mRNA-1
tig0009259 exon 48696 48793 48696 ID=Msa1346890-mRNA-1:exon:5708;Parent=Msa1346890-mRNA-1
tig0009259 exon 49154 49252 49154 ID=Msa1346890-mRNA-1:exon:5707;Parent=Msa1346890-mRNA-1
tig0009259 exon 49364 49532 49364 ID=Msa1346890-mRNA-1:exon:5706;Parent=Msa1346890-mRNA-1
tig0009259 exon 49682 49754 49682 ID=Msa1346890-mRNA-1:exon:5705;Parent=Msa1346890-mRNA-1
tig0009259 exon 51799 52045 51799 ID=Msa1346890-mRNA-1:exon:5704;Parent=Msa1346890-mRNA-1
tig0009259 five_prime_UTR 51984 52045 51984 ID=Msa1346890-mRNA-1:five_prime_utr;Parent=Msa1346890-mRNA-1
tig0009259 CDS 51799 51983 51799 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 49682 49754 49682 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 49364 49532 49364 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 49154 49252 49154 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 48696 48793 48696 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 48301 48494 48301 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 47906 48033 47906 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 47119 47504 47119 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 46669 46871 46669 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 CDS 46412 46541 46412 ID=Msa1346890-mRNA-1:cds;Parent=Msa1346890-mRNA-1
tig0009259 three_prime_UTR 46201 46411 46201 ID=Msa1346890-mRNA-1:three_prime_utr;Parent=Msa1346890-mRNA-1
Gene Sequence

>Msa1346890

ATGGCTCATATTTGTCAATGTCTGAGTCGATTGTTAACTTTCCGGCGAGATTTCCCGGTGACCATTGCCGGAAACAACCGCAAGACAGGGCAGCAGTTGGTGGAGGAAGTGGTGTCACTAGCACACGGTCTTCTCCAGTTGGGTGTCACACCAGGTGATGTTGTAGCCATCTCTGCTTACAACAGTGATTTGTATCTAGAATGGTTATTAGCTATTGCATTTGTTGGAGGAATTGCTGCTCCTCTAAATTATCGTTGGAGTTTTGAAGAGGCAAAGTTAGCAATGAAAGCAGTGAGGCCAGTGATGTTAGTGATTGATGAGAGCTGCTATTCATGGTACTTCAAATTCCAACAAAATGATGTTTCATTTTTGAGGTGGCATGTTTTGTTGGATTCCCCTTCCTCAGATTTTACAAACAAGTGGAATGTGTTGACTCCAGGAATACTTAAGAGGCGTCATGTAAAGCCTCTAGAATTTAACTACTCATGGGCACCTGAAGGAGCTGTCATAATCTGCTTCACTTCAGGAACTACTGGAAAACCCAAGGGAGTCACAATAAGCCATGAAGCTTTGATCATACAGTCCCTAGCCAAGATTGCCATAGTTGGATATAGTGAGGATGATGTTTATCTTCATACTGCTCCATTATGTCACATTGGTGGTTTGTCATCAGCCATGGCCATGCTTATGGTTGGAGGTTGCCATGTATTCATGCCGAAGTTTGATGCAAAATTAGCTGTTGGGGACATAGAGCAATATAATGTGACATCTCTTATTACAGTTCCTGCAATGATGACCAGTCTTATTTCTATTGTTAGGCGCAAAGAAACCTGGAAAGGGGGAGAAACTGTCAAGAAAATACTCAATGGAGGTGGAAGCCTCTCGTTTGAGCTTATCAAAGACACTAGCATATTCTTCCATAAGGCTAAGCTTATTTCAGCTTATGGGATGACAGAAGCATGTTCTTCATTGACATTCCTAACGCTGTATGATCCGATGCAAAAAACCATCAGCCATCCTTTTCAAACATATGGTGAAGAAGAATCCAAACATATCATTCATCAACCACAAGGTGTTTGTGTTGGCAAGGCTGCACCTCATGTAGAACTGAAGATATGCAAAGACGGTGACGCAGGAAGAATTTTAACTAGAGGGCCACATTTAATGCTCAGGTATTGGGATCAAACCCTCACAAACACATCAAATCAAAGGAATGAAGTCTGGTTTGATACAGGTGACATTGGATCAATGGATTGTCATGGTAACTTGTGGCTCCTTGGACGTACAAATGGTCGCATCAAGAGTGGCGGAGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACTAGAACATCCAGGGATTGCAAGAGTTGTTATTGTGGGAATACCAGATGCACGTTTCACAGAAATGGTAACAGCATGTATCCAACCAAGAGAAAATTGGCAATGGTTAGAGCATTCTACTTCAAATGAAGAGTATCATTTATCCATAAAGAATCTTCAACAATACTGTCTGGAAAATAATTTAAGCAGGTTTAAGATACCAAAGATATTCATTGAATGGAGAAAGCCTTTTCCACTCACTACCACGGGAAAAATAAGAAGAGACCAAGTCCGAAAGGAGGTTCTGTCTGAGCTACAATCTTTGCATAGTAATCTCTGA
Protein sequence

>Msa1346890

MAHICQCLSRLLTFRRDFPVTIAGNNRKTGQQLVEEVVSLAHGLLQLGVTPGDVVAISAYNSDLYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMKAVRPVMLVIDESCYSWYFKFQQNDVSFLRWHVLLDSPSSDFTNKWNVLTPGILKRRHVKPLEFNYSWAPEGAVIICFTSGTTGKPKGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVFMPKFDAKLAVGDIEQYNVTSLITVPAMMTSLISIVRRKETWKGGETVKKILNGGGSLSFELIKDTSIFFHKAKLISAYGMTEACSSLTFLTLYDPMQKTISHPFQTYGEEESKHIIHQPQGVCVGKAAPHVELKICKDGDAGRILTRGPHLMLRYWDQTLTNTSNQRNEVWFDTGDIGSMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIARVVIVGIPDARFTEMVTACIQPRENWQWLEHSTSNEEYHLSIKNLQQYCLENNLSRFKIPKIFIEWRKPFPLTTTGKIRRDQVRKEVLSELQSLHSNL*