Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458250 | XP_013468965.1 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 5.73e-88 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458250 | sp|O22969|Y2416_ARATH | 73.451 | 113 | 30 | 0 | 12 | 124 | 14 | 126 | 7.68e-55 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458250 | A0A072VMF5 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.73e-88 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa1458250 | 0.801842 | 7.440144e-49 | -8.615850e-47 |
| Msa0022230 | Msa1458250 | 0.811000 | 8.713058e-51 | -8.615850e-47 |
| Msa0028410 | Msa1458250 | 0.820762 | 5.779977e-53 | -8.615850e-47 |
| Msa0028450 | Msa1458250 | 0.846101 | 2.683776e-59 | -8.615850e-47 |
| Msa0032210 | Msa1458250 | 0.987125 | 3.825703e-169 | -8.615850e-47 |
| Msa0034800 | Msa1458250 | 0.812695 | 3.725649e-51 | -8.615850e-47 |
| Msa0042500 | Msa1458250 | 0.804919 | 1.714245e-49 | -8.615850e-47 |
| Msa0046090 | Msa1458250 | 0.810770 | 9.772243e-51 | -8.615850e-47 |
| Msa0072910 | Msa1458250 | 0.804762 | 1.848619e-49 | -8.615850e-47 |
| Msa0078080 | Msa1458250 | 0.808291 | 3.328337e-50 | -8.615850e-47 |
| Msa0079570 | Msa1458250 | 0.806489 | 8.025540e-50 | -8.615850e-47 |
| Msa0084550 | Msa1458250 | 0.803194 | 3.916779e-49 | -8.615850e-47 |
| Msa0089410 | Msa1458250 | 0.825826 | 3.793771e-54 | -8.615850e-47 |
| Msa0092750 | Msa1458250 | 0.854314 | 1.337004e-61 | -8.615850e-47 |
| Msa0094240 | Msa1458250 | 0.815086 | 1.107151e-51 | -8.615850e-47 |
| Msa0097490 | Msa1458250 | 0.803587 | 3.246675e-49 | -8.615850e-47 |
| Msa0114960 | Msa1458250 | 0.842417 | 2.619221e-58 | -8.615850e-47 |
| Msa0116950 | Msa1458250 | 0.804465 | 2.132585e-49 | -8.615850e-47 |
| Msa0120310 | Msa1458250 | 0.806110 | 9.646050e-50 | -8.615850e-47 |
| Msa1350350 | Msa1458250 | 0.801528 | 8.629505e-49 | -8.615850e-47 |
| Msa1356500 | Msa1458250 | 0.812240 | 4.683912e-51 | -8.615850e-47 |
| Msa1357760 | Msa1458250 | 0.802711 | 4.927660e-49 | -8.615850e-47 |
| Msa1361090 | Msa1458250 | 0.827818 | 1.268005e-54 | -8.615850e-47 |
| Msa1364850 | Msa1458250 | 0.810048 | 1.398603e-50 | -8.615850e-47 |
| Msa1370830 | Msa1458250 | 0.840179 | 1.016209e-57 | -8.615850e-47 |
| Msa1373570 | Msa1458250 | 0.801125 | 1.043413e-48 | -8.615850e-47 |
| Msa1374610 | Msa1458250 | 0.820313 | 7.325338e-53 | -8.615850e-47 |
| Msa1391600 | Msa1458250 | 0.804613 | 1.985612e-49 | -8.615850e-47 |
| Msa1397550 | Msa1458250 | 0.825179 | 5.397528e-54 | -8.615850e-47 |
| Msa1414280 | Msa1458250 | 0.800726 | 1.258805e-48 | -8.615850e-47 |
| Msa1420630 | Msa1458250 | 0.843881 | 1.066393e-58 | -8.615850e-47 |
| Msa1425570 | Msa1458250 | 0.843282 | 1.542170e-58 | -8.615850e-47 |
| Msa1428990 | Msa1458250 | 0.800376 | 1.484065e-48 | -8.615850e-47 |
| Msa1435690 | Msa1458250 | 0.806378 | 8.468872e-50 | -8.615850e-47 |
| Msa1449510 | Msa1458250 | 0.801205 | 1.005053e-48 | -8.615850e-47 |
| Msa1451780 | Msa1458250 | 0.812284 | 4.580916e-51 | -8.615850e-47 |
| Msa1458250 | Msa1465410 | 0.812198 | 4.784155e-51 | -8.615850e-47 |
| Msa1458250 | Msa1466170 | 0.813708 | 2.231975e-51 | -8.615850e-47 |
| Msa0608940 | Msa1458250 | 0.801322 | 9.509301e-49 | -8.615850e-47 |
| Msa0624260 | Msa1458250 | 0.803038 | 4.219111e-49 | -8.615850e-47 |
| Msa0624360 | Msa1458250 | 0.801776 | 7.674101e-49 | -8.615850e-47 |
| Msa0624890 | Msa1458250 | 0.819277 | 1.263865e-52 | -8.615850e-47 |
| Msa0626890 | Msa1458250 | 0.809918 | 1.491875e-50 | -8.615850e-47 |
| Msa0636840 | Msa1458250 | 0.804245 | 2.370131e-49 | -8.615850e-47 |
| Msa0648410 | Msa1458250 | 0.839441 | 1.581787e-57 | -8.615850e-47 |
| Msa0657820 | Msa1458250 | 0.804911 | 1.720750e-49 | -8.615850e-47 |
| Msa0663580 | Msa1458250 | 0.817729 | 2.835018e-52 | -8.615850e-47 |
| Msa0663630 | Msa1458250 | 0.804405 | 2.194688e-49 | -8.615850e-47 |
| Msa0663650 | Msa1458250 | 0.801296 | 9.626964e-49 | -8.615850e-47 |
| Msa0665010 | Msa1458250 | 0.831284 | 1.821010e-55 | -8.615850e-47 |
| Msa0667710 | Msa1458250 | 0.844804 | 6.025282e-59 | -8.615850e-47 |
| Msa0677590 | Msa1458250 | 0.807528 | 4.837377e-50 | -8.615850e-47 |
| Msa0681040 | Msa1458250 | 0.804729 | 1.877948e-49 | -8.615850e-47 |
| Msa0690920 | Msa1458250 | 0.838914 | 2.166802e-57 | -8.615850e-47 |
| Msa0697230 | Msa1458250 | 0.807242 | 5.560903e-50 | -8.615850e-47 |
| Msa0704750 | Msa1458250 | 0.819259 | 1.275902e-52 | -8.615850e-47 |
| Msa0720850 | Msa1458250 | 0.802635 | 5.108061e-49 | -8.615850e-47 |
| Msa0724120 | Msa1458250 | 0.801909 | 7.208435e-49 | -8.615850e-47 |
| Msa0743630 | Msa1458250 | 0.823906 | 1.076469e-53 | -8.615850e-47 |
| Msa0747900 | Msa1458250 | 0.815733 | 7.948620e-52 | -8.615850e-47 |
| Msa0761930 | Msa1458250 | 0.814226 | 1.715680e-51 | -8.615850e-47 |
| Msa0801630 | Msa1458250 | 0.801435 | 9.015851e-49 | -8.615850e-47 |
| Msa0804930 | Msa1458250 | 0.800323 | 1.520779e-48 | -8.615850e-47 |
| Msa0822800 | Msa1458250 | 0.800545 | 1.370526e-48 | -8.615850e-47 |
| Msa0121080 | Msa1458250 | 0.803014 | 4.265768e-49 | -8.615850e-47 |
| Msa0124070 | Msa1458250 | 0.841659 | 4.155737e-58 | -8.615850e-47 |
| Msa0127240 | Msa1458250 | 0.802387 | 5.748307e-49 | -8.615850e-47 |
| Msa0130620 | Msa1458250 | 0.802122 | 6.515783e-49 | -8.615850e-47 |
| Msa0136520 | Msa1458250 | 0.827435 | 1.566769e-54 | -8.615850e-47 |
| Msa0143360 | Msa1458250 | 0.823221 | 1.556696e-53 | -8.615850e-47 |
| Msa0151780 | Msa1458250 | 0.803141 | 4.016879e-49 | -8.615850e-47 |
| Msa0156780 | Msa1458250 | 0.800597 | 1.337514e-48 | -8.615850e-47 |
| Msa0160470 | Msa1458250 | 0.815621 | 8.418652e-52 | -8.615850e-47 |
| Msa0164630 | Msa1458250 | 0.801070 | 1.070971e-48 | -8.615850e-47 |
| Msa0169330 | Msa1458250 | 0.801428 | 9.044544e-49 | -8.615850e-47 |
| Msa0172530 | Msa1458250 | 0.965188 | 2.787069e-124 | -8.615850e-47 |
| Msa0172580 | Msa1458250 | 0.967463 | 2.598080e-127 | -8.615850e-47 |
| Msa0174800 | Msa1458250 | 0.831062 | 2.064792e-55 | -8.615850e-47 |
| Msa0176530 | Msa1458250 | 0.802147 | 6.439615e-49 | -8.615850e-47 |
| Msa0186380 | Msa1458250 | 0.840503 | 8.362627e-58 | -8.615850e-47 |
| Msa0186750 | Msa1458250 | 0.834113 | 3.615963e-56 | -8.615850e-47 |
| Msa0197600 | Msa1458250 | 0.826034 | 3.385386e-54 | -8.615850e-47 |
| Msa0201910 | Msa1458250 | 0.818152 | 2.274897e-52 | -8.615850e-47 |
| Msa0206600 | Msa1458250 | 0.812085 | 5.063586e-51 | -8.615850e-47 |
| Msa0219140 | Msa1458250 | 0.825715 | 4.029696e-54 | -8.615850e-47 |
| Msa0225050 | Msa1458250 | 0.827721 | 1.337859e-54 | -8.615850e-47 |
| Msa1229880 | Msa1458250 | 0.810317 | 1.224053e-50 | -8.615850e-47 |
| Msa1236090 | Msa1458250 | 0.811710 | 6.109844e-51 | -8.615850e-47 |
| Msa1240240 | Msa1458250 | 0.804186 | 2.437576e-49 | -8.615850e-47 |
| Msa1249740 | Msa1458250 | 0.806161 | 9.410485e-50 | -8.615850e-47 |
| Msa1252220 | Msa1458250 | 0.810578 | 1.075372e-50 | -8.615850e-47 |
| Msa1263600 | Msa1458250 | 0.804287 | 2.322886e-49 | -8.615850e-47 |
| Msa1263970 | Msa1458250 | 0.804923 | 1.711245e-49 | -8.615850e-47 |
| Msa1267800 | Msa1458250 | 0.835187 | 1.942255e-56 | -8.615850e-47 |
| Msa1279240 | Msa1458250 | 0.855746 | 5.131087e-62 | -8.615850e-47 |
| Msa1303130 | Msa1458250 | 0.813954 | 1.970720e-51 | -8.615850e-47 |
| Msa1310620 | Msa1458250 | 0.808335 | 3.258152e-50 | -8.615850e-47 |
| Msa1319520 | Msa1458250 | 0.804867 | 1.757453e-49 | -8.615850e-47 |
| Msa1319710 | Msa1458250 | 0.804567 | 2.030747e-49 | -8.615850e-47 |
| Msa1320660 | Msa1458250 | 0.810813 | 9.564682e-51 | -8.615850e-47 |
| Msa1330910 | Msa1458250 | 0.819865 | 9.281079e-53 | -8.615850e-47 |
| Msa1343540 | Msa1458250 | 0.801858 | 7.383514e-49 | -8.615850e-47 |
| Msa0372550 | Msa1458250 | 0.817509 | 3.178883e-52 | -8.615850e-47 |
| Msa0378570 | Msa1458250 | 0.807126 | 5.886305e-50 | -8.615850e-47 |
| Msa0384570 | Msa1458250 | 0.817854 | 2.657101e-52 | -8.615850e-47 |
| Msa0385870 | Msa1458250 | 0.854066 | 1.576075e-61 | -8.615850e-47 |
| Msa0386390 | Msa1458250 | 0.820608 | 6.271045e-53 | -8.615850e-47 |
| Msa0387120 | Msa1458250 | 0.818747 | 1.667582e-52 | -8.615850e-47 |
| Msa0403670 | Msa1458250 | 0.801712 | 7.912118e-49 | -8.615850e-47 |
| Msa0404330 | Msa1458250 | 0.809043 | 2.299782e-50 | -8.615850e-47 |
| Msa0405040 | Msa1458250 | 0.802309 | 5.963227e-49 | -8.615850e-47 |
| Msa0408490 | Msa1458250 | 0.810284 | 1.244163e-50 | -8.615850e-47 |
| Msa0415210 | Msa1458250 | 0.800808 | 1.211306e-48 | -8.615850e-47 |
| Msa0420280 | Msa1458250 | 0.812225 | 4.719292e-51 | -8.615850e-47 |
| Msa0421100 | Msa1458250 | 0.805720 | 1.165135e-49 | -8.615850e-47 |
| Msa0431310 | Msa1458250 | 0.800649 | 1.305415e-48 | -8.615850e-47 |
| Msa0453310 | Msa1458250 | 0.812584 | 3.939472e-51 | -8.615850e-47 |
| Msa0469840 | Msa1458250 | 0.800590 | 1.341733e-48 | -8.615850e-47 |
| Msa0471080 | Msa1458250 | 0.811900 | 5.555883e-51 | -8.615850e-47 |
| Msa0479790 | Msa1458250 | 0.822074 | 2.877860e-53 | -8.615850e-47 |
| Msa0481580 | Msa1458250 | 0.815166 | 1.062403e-51 | -8.615850e-47 |
| Msa1015020 | Msa1458250 | 0.819995 | 8.666063e-53 | -8.615850e-47 |
| Msa1022660 | Msa1458250 | 0.815611 | 8.459510e-52 | -8.615850e-47 |
| Msa1033460 | Msa1458250 | 0.822555 | 2.225393e-53 | -8.615850e-47 |
| Msa1038040 | Msa1458250 | 0.829074 | 6.310084e-55 | -8.615850e-47 |
| Msa1038420 | Msa1458250 | 0.801313 | 9.552843e-49 | -8.615850e-47 |
| Msa1041620 | Msa1458250 | 0.820162 | 7.933098e-53 | -8.615850e-47 |
| Msa1042380 | Msa1458250 | 0.823561 | 1.296567e-53 | -8.615850e-47 |
| Msa1066980 | Msa1458250 | 0.811082 | 8.365544e-51 | -8.615850e-47 |
| Msa1070930 | Msa1458250 | 0.806170 | 9.365991e-50 | -8.615850e-47 |
| Msa1072640 | Msa1458250 | 0.817039 | 4.053802e-52 | -8.615850e-47 |
| Msa1073140 | Msa1458250 | 0.830542 | 2.769842e-55 | -8.615850e-47 |
| Msa1081650 | Msa1458250 | 0.820071 | 8.326816e-53 | -8.615850e-47 |
| Msa1085370 | Msa1458250 | 0.818278 | 2.131090e-52 | -8.615850e-47 |
| Msa0240290 | Msa1458250 | 0.818850 | 1.580869e-52 | -8.615850e-47 |
| Msa0249670 | Msa1458250 | 0.848198 | 7.140491e-60 | -8.615850e-47 |
| Msa0258960 | Msa1458250 | 0.823641 | 1.241821e-53 | -8.615850e-47 |
| Msa0266120 | Msa1458250 | 0.837822 | 4.142481e-57 | -8.615850e-47 |
| Msa0267130 | Msa1458250 | 0.800754 | 1.242478e-48 | -8.615850e-47 |
| Msa0278080 | Msa1458250 | 0.837242 | 5.836001e-57 | -8.615850e-47 |
| Msa0282880 | Msa1458250 | 0.807417 | 5.107152e-50 | -8.615850e-47 |
| Msa0298180 | Msa1458250 | 0.802217 | 6.229791e-49 | -8.615850e-47 |
| Msa0304040 | Msa1458250 | 0.819131 | 1.364130e-52 | -8.615850e-47 |
| Msa0305810 | Msa1458250 | 0.806421 | 8.293093e-50 | -8.615850e-47 |
| Msa0307490 | Msa1458250 | 0.803589 | 3.244124e-49 | -8.615850e-47 |
| Msa0314980 | Msa1458250 | 0.810034 | 1.408825e-50 | -8.615850e-47 |
| Msa0317630 | Msa1458250 | 0.821446 | 4.019849e-53 | -8.615850e-47 |
| Msa0321200 | Msa1458250 | 0.805117 | 1.558501e-49 | -8.615850e-47 |
| Msa0327870 | Msa1458250 | 0.831550 | 1.566795e-55 | -8.615850e-47 |
| Msa0335860 | Msa1458250 | 0.814725 | 1.330742e-51 | -8.615850e-47 |
| Msa0351600 | Msa1458250 | 0.832977 | 6.947765e-56 | -8.615850e-47 |
| Msa0361040 | Msa1458250 | 0.813779 | 2.153615e-51 | -8.615850e-47 |
| Msa1113780 | Msa1458250 | 0.809851 | 1.542088e-50 | -8.615850e-47 |
| Msa1125100 | Msa1458250 | 0.824026 | 1.008473e-53 | -8.615850e-47 |
| Msa1125150 | Msa1458250 | 0.824917 | 6.222786e-54 | -8.615850e-47 |
| Msa1127530 | Msa1458250 | 0.818239 | 2.174155e-52 | -8.615850e-47 |
| Msa1130070 | Msa1458250 | 0.801726 | 7.858403e-49 | -8.615850e-47 |
| Msa1144470 | Msa1458250 | 0.804429 | 2.169763e-49 | -8.615850e-47 |
| Msa1147870 | Msa1458250 | 0.813986 | 1.938893e-51 | -8.615850e-47 |
| Msa1160470 | Msa1458250 | 0.832358 | 9.895392e-56 | -8.615850e-47 |
| Msa1165330 | Msa1458250 | 0.806198 | 9.242126e-50 | -8.615850e-47 |
| Msa1166520 | Msa1458250 | 0.813458 | 2.533904e-51 | -8.615850e-47 |
| Msa1185040 | Msa1458250 | 0.824497 | 7.817092e-54 | -8.615850e-47 |
| Msa1186010 | Msa1458250 | 0.801206 | 1.004269e-48 | -8.615850e-47 |
| Msa1198280 | Msa1458250 | 0.815603 | 8.495920e-52 | -8.615850e-47 |
| Msa1199690 | Msa1458250 | 0.843867 | 1.075990e-58 | -8.615850e-47 |
| Msa1203840 | Msa1458250 | 0.823706 | 1.199052e-53 | -8.615850e-47 |
| Msa1203860 | Msa1458250 | 0.810670 | 1.026827e-50 | -8.615850e-47 |
| Msa1209650 | Msa1458250 | 0.826061 | 3.334940e-54 | -8.615850e-47 |
| Msa1215790 | Msa1458250 | 0.802806 | 4.711404e-49 | -8.615850e-47 |
| Msa1223600 | Msa1458250 | 0.801145 | 1.033771e-48 | -8.615850e-47 |
| Msa0483090 | Msa1458250 | 0.806369 | 8.505460e-50 | -8.615850e-47 |
| Msa0501540 | Msa1458250 | 0.807191 | 5.701268e-50 | -8.615850e-47 |
| Msa0513500 | Msa1458250 | 0.802217 | 6.229833e-49 | -8.615850e-47 |
| Msa0515420 | Msa1458250 | 0.824788 | 6.674511e-54 | -8.615850e-47 |
| Msa0522510 | Msa1458250 | 0.812290 | 4.567814e-51 | -8.615850e-47 |
| Msa0523400 | Msa1458250 | 0.833300 | 5.772257e-56 | -8.615850e-47 |
| Msa0532910 | Msa1458250 | 0.844786 | 6.094695e-59 | -8.615850e-47 |
| Msa0538100 | Msa1458250 | 0.818171 | 2.253164e-52 | -8.615850e-47 |
| Msa0553940 | Msa1458250 | 0.821738 | 3.442205e-53 | -8.615850e-47 |
| Msa0558220 | Msa1458250 | 0.811990 | 5.308428e-51 | -8.615850e-47 |
| Msa0565930 | Msa1458250 | 0.831918 | 1.271336e-55 | -8.615850e-47 |
| Msa0568810 | Msa1458250 | 0.811388 | 7.179911e-51 | -8.615850e-47 |
| Msa0569630 | Msa1458250 | 0.809386 | 1.941609e-50 | -8.615850e-47 |
| Msa0570310 | Msa1458250 | 0.801526 | 8.635890e-49 | -8.615850e-47 |
| Msa0571220 | Msa1458250 | 0.807299 | 5.410561e-50 | -8.615850e-47 |
| Msa0577140 | Msa1458250 | 0.809844 | 1.547932e-50 | -8.615850e-47 |
| Msa0583810 | Msa1458250 | 0.815523 | 8.852390e-52 | -8.615850e-47 |
| Msa0585770 | Msa1458250 | 0.815822 | 7.593331e-52 | -8.615850e-47 |
| Msa0587060 | Msa1458250 | 0.848085 | 7.671587e-60 | -8.615850e-47 |
| Msa0863780 | Msa1458250 | 0.814758 | 1.308991e-51 | -8.615850e-47 |
| Msa0872800 | Msa1458250 | 0.801930 | 7.136462e-49 | -8.615850e-47 |
| Msa0873070 | Msa1458250 | 0.816032 | 6.816983e-52 | -8.615850e-47 |
| Msa0880060 | Msa1458250 | 0.816663 | 4.924595e-52 | -8.615850e-47 |
| Msa0880370 | Msa1458250 | 0.819718 | 1.002327e-52 | -8.615850e-47 |
| Msa0883880 | Msa1458250 | 0.825747 | 3.959671e-54 | -8.615850e-47 |
| Msa0899080 | Msa1458250 | 0.805985 | 1.024880e-49 | -8.615850e-47 |
| Msa0906310 | Msa1458250 | 0.807442 | 5.044673e-50 | -8.615850e-47 |
| Msa0911440 | Msa1458250 | 0.813982 | 1.942197e-51 | -8.615850e-47 |
| Msa0911490 | Msa1458250 | 0.806488 | 8.027335e-50 | -8.615850e-47 |
| Msa0932040 | Msa1458250 | 0.815916 | 7.235269e-52 | -8.615850e-47 |
| Msa0967260 | Msa1458250 | 0.830686 | 2.553109e-55 | -8.615850e-47 |
| Msa0967920 | Msa1458250 | 0.811240 | 7.728660e-51 | -8.615850e-47 |
| Msa0968970 | Msa1458250 | 0.806282 | 8.872943e-50 | -8.615850e-47 |
| Msa0970160 | Msa1458250 | 0.807477 | 4.959600e-50 | -8.615850e-47 |
| Msa0975460 | Msa1458250 | 0.825395 | 4.798473e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458250 | MtrunA17_Chr1g0190531 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 5.27e-92 | 261 |
| Msa1458250 | MtrunA17_Chr2g0332861 | 82.000 | 100 | 18 | 0 | 13 | 112 | 19 | 118 | 2.19e-56 | 172 |
| Msa1458250 | MtrunA17_Chr4g0003571 | 75.455 | 110 | 22 | 1 | 8 | 112 | 4 | 113 | 1.15e-54 | 167 |
| Msa1458250 | MtrunA17_Chr5g0395021 | 57.143 | 91 | 39 | 0 | 20 | 110 | 41 | 131 | 1.37e-29 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458250 | AT3G04620.1 | 89.109 | 101 | 11 | 0 | 14 | 114 | 33 | 133 | 3.74e-63 | 190 |
| Msa1458250 | AT2G34160.1 | 73.451 | 113 | 30 | 0 | 12 | 124 | 14 | 126 | 7.80e-56 | 171 |
| Msa1458250 | AT1G29250.1 | 77.228 | 101 | 23 | 0 | 12 | 112 | 14 | 114 | 4.53e-53 | 163 |
Find 47 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATTCTGTTCTTCTTA+TGG | 0.143902 | tig0039490:+8200 | Msa1458250:intergenic |
| AAACATCATATATTATAATA+TGG | 0.229375 | tig0039490:-6870 | Msa1458250:three_prime_UTR |
| ATTCATGGACGTAAGTAAAT+AGG | 0.250702 | tig0039490:-6801 | Msa1458250:three_prime_UTR |
| CTGAATTCTGTTCTTCTTAT+GGG | 0.253699 | tig0039490:+8201 | Msa1458250:intergenic |
| TCAGTAGCTGCTTCTGATTC+AGG | 0.262383 | tig0039490:+6907 | Msa1458250:intergenic |
| TCATTTGCAGTTTCAGTTAC+AGG | 0.276939 | tig0039490:+8226 | Msa1458250:intergenic |
| GTCAGTGCCTTGTTTATATA+AGG | 0.295046 | tig0039490:+8312 | Msa1458250:intergenic |
| GTAACGGTAAAGTAGTTTAA+TGG | 0.315122 | tig0039490:+8289 | Msa1458250:intergenic |
| TTCATGGACGTAAGTAAATA+GGG | 0.330600 | tig0039490:-6800 | Msa1458250:three_prime_UTR |
| CCATAAGAAGAACAGAATTC+AGG | 0.338440 | tig0039490:-8200 | Msa1458250:CDS |
| GTAAAAGAAAAGTGGTTTCT+TGG | 0.349846 | tig0039490:+8168 | Msa1458250:intergenic |
| AATACAATCTAAAGTTATAA+TGG | 0.350985 | tig0039490:+6715 | Msa1458250:intergenic |
| GAGGTTGAGCTTTCTGCTCT+TGG | 0.357617 | tig0039490:-7749 | Msa1458250:CDS |
| GAGCTTTCTGCTCTTGGAAT+GGG | 0.372225 | tig0039490:-7743 | Msa1458250:intron |
| GAAAAGTGGTTTCTTGGTGT+TGG | 0.373099 | tig0039490:+8174 | Msa1458250:intergenic |
| TTCCACCTCATAATTGAATC+AGG | 0.379232 | tig0039490:+6606 | Msa1458250:intergenic |
| TAACGGTAAAGTAGTTTAAT+GGG | 0.430336 | tig0039490:+8290 | Msa1458250:intergenic |
| TGAGCTTTCTGCTCTTGGAA+TGG | 0.445801 | tig0039490:-7744 | Msa1458250:CDS |
| TTTGTAGATTGAAATTGTGC+TGG | 0.464511 | tig0039490:-6980 | Msa1458250:intron |
| AACATCATATATTATAATAT+GGG | 0.471119 | tig0039490:-6869 | Msa1458250:three_prime_UTR |
| TCCATTGTTCTTCAAAATCT+CGG | 0.472867 | tig0039490:+7272 | Msa1458250:intergenic |
| AATGAGGGGATCAAAGTTGT+AGG | 0.482695 | tig0039490:-6748 | Msa1458250:three_prime_UTR |
| TTCAGTTACAGGTGCAGCTA+TGG | 0.492084 | tig0039490:+8237 | Msa1458250:intergenic |
| TCAGGTGTGGTGGTGTCAGC+AGG | 0.492551 | tig0039490:+6925 | Msa1458250:intergenic |
| CAAAGGTCGGCTTGTGCAGA+AGG | 0.493622 | tig0039490:-7107 | Msa1458250:CDS |
| ACCTCATAATTGAATCAGGT+TGG | 0.502585 | tig0039490:+6610 | Msa1458250:intergenic |
| CCTCATAATTGAATCAGGTT+GGG | 0.517241 | tig0039490:+6611 | Msa1458250:intergenic |
| GACATCTACAGTTGGCATGA+AGG | 0.541089 | tig0039490:-7137 | Msa1458250:CDS |
| CGTGGAGTTCAATGCAATGA+GGG | 0.553178 | tig0039490:-6763 | Msa1458250:three_prime_UTR |
| TGAGAAGTTTGACAATATGA+TGG | 0.556772 | tig0039490:-6950 | Msa1458250:CDS |
| TGCTTCTGATTCAGGTGTGG+TGG | 0.564894 | tig0039490:+6915 | Msa1458250:intergenic |
| GAAGTATTGACATCTACAGT+TGG | 0.573871 | tig0039490:-7145 | Msa1458250:CDS |
| TTGTAGATTGAAATTGTGCT+GGG | 0.576481 | tig0039490:-6979 | Msa1458250:intron |
| AGATTGACGTAAAAGAAAAG+TGG | 0.580806 | tig0039490:+8160 | Msa1458250:intergenic |
| GTAATCCTCTGTAACTGTAA+CGG | 0.592251 | tig0039490:+8273 | Msa1458250:intergenic |
| AGCTGCTTCTGATTCAGGTG+TGG | 0.603045 | tig0039490:+6912 | Msa1458250:intergenic |
| CATGGACGTAAGTAAATAGG+GGG | 0.610176 | tig0039490:-6798 | Msa1458250:three_prime_UTR |
| CTTTACCGTTACAGTTACAG+AGG | 0.610243 | tig0039490:-8278 | Msa1458250:five_prime_UTR |
| TCATGGACGTAAGTAAATAG+GGG | 0.629086 | tig0039490:-6799 | Msa1458250:three_prime_UTR |
| TCGTGGAGTTCAATGCAATG+AGG | 0.638219 | tig0039490:-6764 | Msa1458250:three_prime_UTR |
| TGAAGGATGAGAACAAAGGT+CGG | 0.640401 | tig0039490:-7120 | Msa1458250:CDS |
| TCGGCTTGTGCAGAAGGCAA+AGG | 0.641693 | tig0039490:-7101 | Msa1458250:intron |
| ACTCATGCCTTATATAAACA+AGG | 0.680741 | tig0039490:-8319 | Msa1458250:five_prime_UTR |
| GTGGAGTTCAATGCAATGAG+GGG | 0.682802 | tig0039490:-6762 | Msa1458250:three_prime_UTR |
| ATACATTCAGCAGCACAATG+AGG | 0.717661 | tig0039490:-7768 | Msa1458250:CDS |
| GGCATGAAGGATGAGAACAA+AGG | 0.737049 | tig0039490:-7124 | Msa1458250:CDS |
| ATGGACGTAAGTAAATAGGG+GGG | 0.764770 | tig0039490:-6797 | Msa1458250:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATCATATATTATAATA+TGG | - | tig0039490:8068-8087 | Msa1458250:intron | 10.0% |
| !! | AACATCATATATTATAATAT+GGG | - | tig0039490:8069-8088 | Msa1458250:intron | 10.0% |
| !! | AAACATCATATATTATAATA+TGG | - | tig0039490:8068-8087 | Msa1458250:intron | 10.0% |
| !! | AACATCATATATTATAATAT+GGG | - | tig0039490:8069-8088 | Msa1458250:intron | 10.0% |
| !! | ATTTATTTACATTACTTTGA+TGG | - | tig0039490:7053-7072 | Msa1458250:intron | 15.0% |
| !! | TTAAAACAATGTAATGTATA+AGG | - | tig0039490:7454-7473 | Msa1458250:intron | 15.0% |
| !!! | AATACAATCTAAAGTTATAA+TGG | + | tig0039490:8226-8245 | Msa1458250:intergenic | 15.0% |
| !! | ATTTATTTACATTACTTTGA+TGG | - | tig0039490:7053-7072 | Msa1458250:intron | 15.0% |
| !! | TTAAAACAATGTAATGTATA+AGG | - | tig0039490:7454-7473 | Msa1458250:intron | 15.0% |
| !!! | AATACAATCTAAAGTTATAA+TGG | + | tig0039490:8226-8245 | Msa1458250:intergenic | 15.0% |
| !! | AATGATCATTAGATTAAGAT+CGG | - | tig0039490:6865-6884 | Msa1458250:three_prime_UTR | 20.0% |
| !! | GCTATAGAAAAGAAAAAAAA+TGG | - | tig0039490:7099-7118 | Msa1458250:intron | 20.0% |
| !! | CAAATTAAAGACAAAAAGAA+GGG | + | tig0039490:7247-7266 | Msa1458250:intergenic | 20.0% |
| !! | AGAAGAATCCAATTAATAAT+CGG | + | tig0039490:7275-7294 | Msa1458250:intergenic | 20.0% |
| !!! | ATTTTAATGTTAGTTGTTTC+TGG | - | tig0039490:7352-7371 | Msa1458250:intron | 20.0% |
| !! | AAAAAGAAAAACAGAAAATG+AGG | - | tig0039490:7480-7499 | Msa1458250:intron | 20.0% |
| !! | CTAATCAATTAATGAATGTT+TGG | - | tig0039490:7762-7781 | Msa1458250:CDS | 20.0% |
| !! | TGAAAGAAAAAAGACATAAT+TGG | + | tig0039490:8302-8321 | Msa1458250:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTTCTTTCA+AGG | - | tig0039490:8302-8321 | Msa1458250:five_prime_UTR | 20.0% |
| !! | AATGATCATTAGATTAAGAT+CGG | - | tig0039490:6865-6884 | Msa1458250:three_prime_UTR | 20.0% |
| !! | GCTATAGAAAAGAAAAAAAA+TGG | - | tig0039490:7099-7118 | Msa1458250:intron | 20.0% |
| !! | CAAATTAAAGACAAAAAGAA+GGG | + | tig0039490:7247-7266 | Msa1458250:intergenic | 20.0% |
| !! | AGAAGAATCCAATTAATAAT+CGG | + | tig0039490:7275-7294 | Msa1458250:intergenic | 20.0% |
| !!! | ATTTTAATGTTAGTTGTTTC+TGG | - | tig0039490:7352-7371 | Msa1458250:intron | 20.0% |
| !! | AAAAAGAAAAACAGAAAATG+AGG | - | tig0039490:7480-7499 | Msa1458250:intron | 20.0% |
| !! | CTAATCAATTAATGAATGTT+TGG | - | tig0039490:7762-7781 | Msa1458250:CDS | 20.0% |
| !! | TGAAAGAAAAAAGACATAAT+TGG | + | tig0039490:8302-8321 | Msa1458250:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTTCTTTCA+AGG | - | tig0039490:8302-8321 | Msa1458250:five_prime_UTR | 20.0% |
| ! | TAACGGTAAAGTAGTTTAAT+GGG | + | tig0039490:6651-6670 | Msa0079600:intergenic | 25.0% |
| !! | ATGTAATGTCACTTGATAAT+CGG | - | tig0039490:6811-6830 | Msa1458250:three_prime_UTR | 25.0% |
| !! | GACTTTCTTAATTTTAAGCA+CGG | - | tig0039490:6887-6906 | Msa1458250:exon | 25.0% |
| ! | TTCAAATTGTGATCAACTAA+TGG | - | tig0039490:7077-7096 | Msa1458250:intron | 25.0% |
| ! | AGAAAAGAAAAAAAATGGCT+AGG | - | tig0039490:7104-7123 | Msa1458250:CDS | 25.0% |
| !! | ACAAAAAGAAGGGAAATTTT+AGG | + | tig0039490:7237-7256 | Msa1458250:intergenic | 25.0% |
| ! | GCAAATTAAAGACAAAAAGA+AGG | + | tig0039490:7248-7267 | Msa1458250:intergenic | 25.0% |
| !!! | TTACATTGACTTAACTATCA+AGG | - | tig0039490:7383-7402 | Msa1458250:intron | 25.0% |
| !!! | TCAAGGCATTATTTTTACTA+TGG | - | tig0039490:7400-7419 | Msa1458250:intron | 25.0% |
| !!! | TATTTTTACTATGGTGTGTA+AGG | - | tig0039490:7409-7428 | Msa1458250:intron | 25.0% |
| !! | TACTTTTGTTCAATTGATAG+AGG | + | tig0039490:7531-7550 | Msa1458250:intergenic | 25.0% |
| ! | TAGAGTAAGAATATGAAACT+AGG | + | tig0039490:7570-7589 | Msa1458250:intergenic | 25.0% |
| ! | ACAAAAATGTTGACATGAAT+TGG | - | tig0039490:7614-7633 | Msa1458250:intron | 25.0% |
| ! | TATAACTCTCATTCATATGA+TGG | - | tig0039490:7729-7748 | Msa1458250:intron | 25.0% |
| !! | TGTTGTAATTTTTGCATTCA+TGG | - | tig0039490:8122-8141 | Msa1458250:intron | 25.0% |
| ! | TAACGGTAAAGTAGTTTAAT+GGG | + | tig0039490:6651-6670 | Msa1458250:intergenic | 25.0% |
| !! | ATGTAATGTCACTTGATAAT+CGG | - | tig0039490:6811-6830 | Msa1458250:three_prime_UTR | 25.0% |
| !! | GACTTTCTTAATTTTAAGCA+CGG | - | tig0039490:6887-6906 | Msa1458250:exon | 25.0% |
| ! | TTCAAATTGTGATCAACTAA+TGG | - | tig0039490:7077-7096 | Msa1458250:intron | 25.0% |
| ! | AGAAAAGAAAAAAAATGGCT+AGG | - | tig0039490:7104-7123 | Msa1458250:CDS | 25.0% |
| !! | ACAAAAAGAAGGGAAATTTT+AGG | + | tig0039490:7237-7256 | Msa1458250:intergenic | 25.0% |
| ! | GCAAATTAAAGACAAAAAGA+AGG | + | tig0039490:7248-7267 | Msa1458250:intergenic | 25.0% |
| !!! | TTACATTGACTTAACTATCA+AGG | - | tig0039490:7383-7402 | Msa1458250:intron | 25.0% |
| !!! | TCAAGGCATTATTTTTACTA+TGG | - | tig0039490:7400-7419 | Msa1458250:intron | 25.0% |
| !!! | TATTTTTACTATGGTGTGTA+AGG | - | tig0039490:7409-7428 | Msa1458250:intron | 25.0% |
| !! | TACTTTTGTTCAATTGATAG+AGG | + | tig0039490:7531-7550 | Msa1458250:intergenic | 25.0% |
| ! | TAGAGTAAGAATATGAAACT+AGG | + | tig0039490:7570-7589 | Msa1458250:intergenic | 25.0% |
| ! | ACAAAAATGTTGACATGAAT+TGG | - | tig0039490:7614-7633 | Msa1458250:intron | 25.0% |
| ! | TATAACTCTCATTCATATGA+TGG | - | tig0039490:7729-7748 | Msa1458250:intron | 25.0% |
| !! | TGTTGTAATTTTTGCATTCA+TGG | - | tig0039490:8122-8141 | Msa1458250:intron | 25.0% |
| GTAACGGTAAAGTAGTTTAA+TGG | + | tig0039490:6652-6671 | Msa0079600:intergenic | 30.0% | |
| CTGAATTCTGTTCTTCTTAT+GGG | + | tig0039490:6740-6759 | Msa1458250:intergenic | 30.0% | |
| GTAAAAGAAAAGTGGTTTCT+TGG | + | tig0039490:6773-6792 | Msa1458250:intergenic | 30.0% | |
| AGATTGACGTAAAAGAAAAG+TGG | + | tig0039490:6781-6800 | Msa1458250:intergenic | 30.0% | |
| ! | TGTAATGTCACTTGATAATC+GGG | - | tig0039490:6812-6831 | Msa1458250:three_prime_UTR | 30.0% |
| AATGATCATTGATGTAGTGA+CGG | + | tig0039490:6855-6874 | Msa1458250:intergenic | 30.0% | |
| ACTGTTTAATCTGAATTCAG+CGG | - | tig0039490:6954-6973 | Msa1458250:CDS | 30.0% | |
| TTGCACAACCGATTATTAAT+TGG | - | tig0039490:7264-7283 | Msa1458250:CDS | 30.0% | |
| AATTGATAGAGGATATCTGT+TGG | + | tig0039490:7520-7539 | Msa1458250:intergenic | 30.0% | |
| TCCATTGTTCTTCAAAATCT+CGG | + | tig0039490:7669-7688 | Msa1458250:intergenic | 30.0% | |
| ! | TGAATTCTCTTCATTTTCGT+CGG | + | tig0039490:7870-7889 | Msa1458250:intergenic | 30.0% |
| CAAAATACCAAGAAAAGTCT+AGG | + | tig0039490:7942-7961 | Msa1458250:intergenic | 30.0% | |
| TTTGTAGATTGAAATTGTGC+TGG | - | tig0039490:7958-7977 | Msa1458250:intron | 30.0% | |
| TTGTAGATTGAAATTGTGCT+GGG | - | tig0039490:7959-7978 | Msa1458250:intron | 30.0% | |
| TGAGAAGTTTGACAATATGA+TGG | - | tig0039490:7988-8007 | Msa1458250:intron | 30.0% | |
| ATTCATGGACGTAAGTAAAT+AGG | - | tig0039490:8137-8156 | Msa1458250:intron | 30.0% | |
| TTCATGGACGTAAGTAAATA+GGG | - | tig0039490:8138-8157 | Msa1458250:intron | 30.0% | |
| GTAACGGTAAAGTAGTTTAA+TGG | + | tig0039490:6652-6671 | Msa1458250:intergenic | 30.0% | |
| CTGAATTCTGTTCTTCTTAT+GGG | + | tig0039490:6740-6759 | Msa1458250:intergenic | 30.0% | |
| GTAAAAGAAAAGTGGTTTCT+TGG | + | tig0039490:6773-6792 | Msa1458250:intergenic | 30.0% | |
| AGATTGACGTAAAAGAAAAG+TGG | + | tig0039490:6781-6800 | Msa1458250:intergenic | 30.0% | |
| ! | TGTAATGTCACTTGATAATC+GGG | - | tig0039490:6812-6831 | Msa1458250:three_prime_UTR | 30.0% |
| AATGATCATTGATGTAGTGA+CGG | + | tig0039490:6855-6874 | Msa1458250:intergenic | 30.0% | |
| ACTGTTTAATCTGAATTCAG+CGG | - | tig0039490:6954-6973 | Msa1458250:CDS | 30.0% | |
| TTGCACAACCGATTATTAAT+TGG | - | tig0039490:7264-7283 | Msa1458250:CDS | 30.0% | |
| AATTGATAGAGGATATCTGT+TGG | + | tig0039490:7520-7539 | Msa1458250:intergenic | 30.0% | |
| TCCATTGTTCTTCAAAATCT+CGG | + | tig0039490:7669-7688 | Msa1458250:intergenic | 30.0% | |
| ! | TGAATTCTCTTCATTTTCGT+CGG | + | tig0039490:7870-7889 | Msa1458250:intergenic | 30.0% |
| CAAAATACCAAGAAAAGTCT+AGG | + | tig0039490:7942-7961 | Msa1458250:intergenic | 30.0% | |
| TTTGTAGATTGAAATTGTGC+TGG | - | tig0039490:7958-7977 | Msa1458250:intron | 30.0% | |
| TTGTAGATTGAAATTGTGCT+GGG | - | tig0039490:7959-7978 | Msa1458250:intron | 30.0% | |
| TGAGAAGTTTGACAATATGA+TGG | - | tig0039490:7988-8007 | Msa1458250:intron | 30.0% | |
| ATTCATGGACGTAAGTAAAT+AGG | - | tig0039490:8137-8156 | Msa1458250:intron | 30.0% | |
| TTCATGGACGTAAGTAAATA+GGG | - | tig0039490:8138-8157 | Msa1458250:intron | 30.0% | |
| !! | GTCAGTGCCTTGTTTATATA+AGG | + | tig0039490:6629-6648 | Msa0079600:intergenic | 35.0% |
| GTAATCCTCTGTAACTGTAA+CGG | + | tig0039490:6668-6687 | Msa1458250:intergenic | 35.0% | |
| TCATTTGCAGTTTCAGTTAC+AGG | + | tig0039490:6715-6734 | Msa1458250:intergenic | 35.0% | |
| CCTGAATTCTGTTCTTCTTA+TGG | + | tig0039490:6741-6760 | Msa1458250:intergenic | 35.0% | |
| CCATAAGAAGAACAGAATTC+AGG | - | tig0039490:6738-6757 | Msa1458250:three_prime_UTR | 35.0% | |
| CAAGTGACATTACATTACCT+TGG | + | tig0039490:6806-6825 | Msa1458250:intergenic | 35.0% | |
| TGAATGTATCTCTGCATCAA+AGG | + | tig0039490:7159-7178 | Msa1458250:intergenic | 35.0% | |
| TATGAAACTAGGAACAGATG+AGG | + | tig0039490:7559-7578 | Msa1458250:intergenic | 35.0% | |
| !! | GAAGTATTGACATCTACAGT+TGG | - | tig0039490:7793-7812 | Msa1458250:intron | 35.0% |
| ! | TCTTAAGCCTAGACTTTTCT+TGG | - | tig0039490:7932-7951 | Msa1458250:intron | 35.0% |
| TCATGGACGTAAGTAAATAG+GGG | - | tig0039490:8139-8158 | Msa1458250:intron | 35.0% | |
| !! | GTCAGTGCCTTGTTTATATA+AGG | + | tig0039490:6629-6648 | Msa1458250:intergenic | 35.0% |
| GTAATCCTCTGTAACTGTAA+CGG | + | tig0039490:6668-6687 | Msa1458250:intergenic | 35.0% | |
| TCATTTGCAGTTTCAGTTAC+AGG | + | tig0039490:6715-6734 | Msa1458250:intergenic | 35.0% | |
| CCTGAATTCTGTTCTTCTTA+TGG | + | tig0039490:6741-6760 | Msa1458250:intergenic | 35.0% | |
| CCATAAGAAGAACAGAATTC+AGG | - | tig0039490:6738-6757 | Msa1458250:three_prime_UTR | 35.0% | |
| CAAGTGACATTACATTACCT+TGG | + | tig0039490:6806-6825 | Msa1458250:intergenic | 35.0% | |
| TGAATGTATCTCTGCATCAA+AGG | + | tig0039490:7159-7178 | Msa1458250:intergenic | 35.0% | |
| TATGAAACTAGGAACAGATG+AGG | + | tig0039490:7559-7578 | Msa1458250:intergenic | 35.0% | |
| !! | GAAGTATTGACATCTACAGT+TGG | - | tig0039490:7793-7812 | Msa1458250:intron | 35.0% |
| ! | TCTTAAGCCTAGACTTTTCT+TGG | - | tig0039490:7932-7951 | Msa1458250:intron | 35.0% |
| TCATGGACGTAAGTAAATAG+GGG | - | tig0039490:8139-8158 | Msa1458250:intron | 35.0% | |
| CTTTACCGTTACAGTTACAG+AGG | - | tig0039490:6660-6679 | Msa1458250:three_prime_UTR | 40.0% | |
| ! | GAAAAGTGGTTTCTTGGTGT+TGG | + | tig0039490:6767-6786 | Msa1458250:intergenic | 40.0% |
| ! | CTTGATAATCGGGATACCTT+TGG | - | tig0039490:6822-6841 | Msa1458250:three_prime_UTR | 40.0% |
| TAGTGACGGTATGAATCCAA+AGG | + | tig0039490:6841-6860 | Msa1458250:intergenic | 40.0% | |
| CATTCATGTAGTCGATGCAT+TGG | + | tig0039490:6983-7002 | Msa1458250:intergenic | 40.0% | |
| ATACATTCAGCAGCACAATG+AGG | - | tig0039490:7170-7189 | Msa1458250:intron | 40.0% | |
| !! | GCCGAGATTTTGAAGAACAA+TGG | - | tig0039490:7665-7684 | Msa1458250:intron | 40.0% |
| ACTTGCAACTGAGAAGAGTA+AGG | - | tig0039490:7688-7707 | Msa1458250:intron | 40.0% | |
| TGAAGGATGAGAACAAAGGT+CGG | - | tig0039490:7818-7837 | Msa1458250:intron | 40.0% | |
| CATGGACGTAAGTAAATAGG+GGG | - | tig0039490:8140-8159 | Msa1458250:intron | 40.0% | |
| ATGGACGTAAGTAAATAGGG+GGG | - | tig0039490:8141-8160 | Msa1458250:intron | 40.0% | |
| AGTAAATAGGGGGGTAGAAA+AGG | - | tig0039490:8150-8169 | Msa1458250:intron | 40.0% | |
| GTAAATAGGGGGGTAGAAAA+GGG | - | tig0039490:8151-8170 | Msa1458250:intron | 40.0% | |
| AATGAGGGGATCAAAGTTGT+AGG | - | tig0039490:8190-8209 | Msa1458250:CDS | 40.0% | |
| CTTTACCGTTACAGTTACAG+AGG | - | tig0039490:6660-6679 | Msa1458250:three_prime_UTR | 40.0% | |
| ! | GAAAAGTGGTTTCTTGGTGT+TGG | + | tig0039490:6767-6786 | Msa1458250:intergenic | 40.0% |
| ! | CTTGATAATCGGGATACCTT+TGG | - | tig0039490:6822-6841 | Msa1458250:three_prime_UTR | 40.0% |
| TAGTGACGGTATGAATCCAA+AGG | + | tig0039490:6841-6860 | Msa1458250:intergenic | 40.0% | |
| CATTCATGTAGTCGATGCAT+TGG | + | tig0039490:6983-7002 | Msa1458250:intergenic | 40.0% | |
| ATACATTCAGCAGCACAATG+AGG | - | tig0039490:7170-7189 | Msa1458250:intron | 40.0% | |
| !! | GCCGAGATTTTGAAGAACAA+TGG | - | tig0039490:7665-7684 | Msa1458250:intron | 40.0% |
| ACTTGCAACTGAGAAGAGTA+AGG | - | tig0039490:7688-7707 | Msa1458250:intron | 40.0% | |
| TGAAGGATGAGAACAAAGGT+CGG | - | tig0039490:7818-7837 | Msa1458250:intron | 40.0% | |
| CATGGACGTAAGTAAATAGG+GGG | - | tig0039490:8140-8159 | Msa1458250:intron | 40.0% | |
| ATGGACGTAAGTAAATAGGG+GGG | - | tig0039490:8141-8160 | Msa1458250:intron | 40.0% | |
| AGTAAATAGGGGGGTAGAAA+AGG | - | tig0039490:8150-8169 | Msa1458250:intron | 40.0% | |
| GTAAATAGGGGGGTAGAAAA+GGG | - | tig0039490:8151-8170 | Msa1458250:intron | 40.0% | |
| AATGAGGGGATCAAAGTTGT+AGG | - | tig0039490:8190-8209 | Msa1458250:CDS | 40.0% | |
| TTCAGTTACAGGTGCAGCTA+TGG | + | tig0039490:6704-6723 | Msa1458250:intergenic | 45.0% | |
| ! | CTTTTACGTCAATCTCGCCA+AGG | - | tig0039490:6786-6805 | Msa1458250:three_prime_UTR | 45.0% |
| TGAGCTTTCTGCTCTTGGAA+TGG | - | tig0039490:7194-7213 | Msa1458250:intron | 45.0% | |
| GAGCTTTCTGCTCTTGGAAT+GGG | - | tig0039490:7195-7214 | Msa1458250:intron | 45.0% | |
| GACATCTACAGTTGGCATGA+AGG | - | tig0039490:7801-7820 | Msa1458250:intron | 45.0% | |
| GGCATGAAGGATGAGAACAA+AGG | - | tig0039490:7814-7833 | Msa1458250:intron | 45.0% | |
| TCAGTAGCTGCTTCTGATTC+AGG | + | tig0039490:8034-8053 | Msa1458250:intergenic | 45.0% | |
| TCGTGGAGTTCAATGCAATG+AGG | - | tig0039490:8174-8193 | Msa1458250:CDS | 45.0% | |
| CGTGGAGTTCAATGCAATGA+GGG | - | tig0039490:8175-8194 | Msa1458250:CDS | 45.0% | |
| GTGGAGTTCAATGCAATGAG+GGG | - | tig0039490:8176-8195 | Msa1458250:CDS | 45.0% | |
| TTCAGTTACAGGTGCAGCTA+TGG | + | tig0039490:6704-6723 | Msa1458250:intergenic | 45.0% | |
| ! | CTTTTACGTCAATCTCGCCA+AGG | - | tig0039490:6786-6805 | Msa1458250:three_prime_UTR | 45.0% |
| TGAGCTTTCTGCTCTTGGAA+TGG | - | tig0039490:7194-7213 | Msa1458250:intron | 45.0% | |
| GAGCTTTCTGCTCTTGGAAT+GGG | - | tig0039490:7195-7214 | Msa1458250:intron | 45.0% | |
| GACATCTACAGTTGGCATGA+AGG | - | tig0039490:7801-7820 | Msa1458250:intron | 45.0% | |
| GGCATGAAGGATGAGAACAA+AGG | - | tig0039490:7814-7833 | Msa1458250:intron | 45.0% | |
| TCAGTAGCTGCTTCTGATTC+AGG | + | tig0039490:8034-8053 | Msa1458250:intergenic | 45.0% | |
| TCGTGGAGTTCAATGCAATG+AGG | - | tig0039490:8174-8193 | Msa1458250:CDS | 45.0% | |
| CGTGGAGTTCAATGCAATGA+GGG | - | tig0039490:8175-8194 | Msa1458250:CDS | 45.0% | |
| GTGGAGTTCAATGCAATGAG+GGG | - | tig0039490:8176-8195 | Msa1458250:CDS | 45.0% | |
| GAGGTTGAGCTTTCTGCTCT+TGG | - | tig0039490:7189-7208 | Msa1458250:intron | 50.0% | |
| TGCTTCTGATTCAGGTGTGG+TGG | + | tig0039490:8026-8045 | Msa1458250:intergenic | 50.0% | |
| AGCTGCTTCTGATTCAGGTG+TGG | + | tig0039490:8029-8048 | Msa1458250:intergenic | 50.0% | |
| GAGGTTGAGCTTTCTGCTCT+TGG | - | tig0039490:7189-7208 | Msa1458250:intron | 50.0% | |
| TGCTTCTGATTCAGGTGTGG+TGG | + | tig0039490:8026-8045 | Msa1458250:intergenic | 50.0% | |
| AGCTGCTTCTGATTCAGGTG+TGG | + | tig0039490:8029-8048 | Msa1458250:intergenic | 50.0% | |
| !! | CAAAGGTCGGCTTGTGCAGA+AGG | - | tig0039490:7831-7850 | Msa1458250:intron | 55.0% |
| ! | TCGGCTTGTGCAGAAGGCAA+AGG | - | tig0039490:7837-7856 | Msa1458250:intron | 55.0% |
| !! | CAAAGGTCGGCTTGTGCAGA+AGG | - | tig0039490:7831-7850 | Msa1458250:intron | 55.0% |
| ! | TCGGCTTGTGCAGAAGGCAA+AGG | - | tig0039490:7837-7856 | Msa1458250:intron | 55.0% |
| ! | TCAGGTGTGGTGGTGTCAGC+AGG | + | tig0039490:8016-8035 | Msa1458250:intergenic | 60.0% |
| AGGGGGGTAGAAAAGGGTCG+TGG | - | tig0039490:8157-8176 | Msa1458250:CDS | 60.0% | |
| ! | TCAGGTGTGGTGGTGTCAGC+AGG | + | tig0039490:8016-8035 | Msa1458250:intergenic | 60.0% |
| AGGGGGGTAGAAAAGGGTCG+TGG | - | tig0039490:8157-8176 | Msa1458250:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0039490 | gene | 6620 | 8340 | 6620 | ID=Msa1458250;Name=Msa1458250 |
| tig0039490 | mRNA | 6620 | 8340 | 6620 | ID=Msa1458250-mRNA-1;Parent=Msa1458250;Name=Msa1458250-mRNA-1;_AED=0.22;_eAED=0.22;_QI=74|1|1|1|1|1|5|274|130 |
| tig0039490 | exon | 6620 | 6995 | 6620 | ID=Msa1458250-mRNA-1:exon:21674;Parent=Msa1458250-mRNA-1 |
| tig0039490 | exon | 7102 | 7166 | 7102 | ID=Msa1458250-mRNA-1:exon:21673;Parent=Msa1458250-mRNA-1 |
| tig0039490 | exon | 7256 | 7318 | 7256 | ID=Msa1458250-mRNA-1:exon:21672;Parent=Msa1458250-mRNA-1 |
| tig0039490 | exon | 7744 | 7792 | 7744 | ID=Msa1458250-mRNA-1:exon:21671;Parent=Msa1458250-mRNA-1 |
| tig0039490 | exon | 8153 | 8340 | 8153 | ID=Msa1458250-mRNA-1:exon:21670;Parent=Msa1458250-mRNA-1 |
| tig0039490 | five_prime_UTR | 8267 | 8340 | 8267 | ID=Msa1458250-mRNA-1:five_prime_utr;Parent=Msa1458250-mRNA-1 |
| tig0039490 | CDS | 8153 | 8266 | 8153 | ID=Msa1458250-mRNA-1:cds;Parent=Msa1458250-mRNA-1 |
| tig0039490 | CDS | 7744 | 7792 | 7744 | ID=Msa1458250-mRNA-1:cds;Parent=Msa1458250-mRNA-1 |
| tig0039490 | CDS | 7256 | 7318 | 7256 | ID=Msa1458250-mRNA-1:cds;Parent=Msa1458250-mRNA-1 |
| tig0039490 | CDS | 7102 | 7166 | 7102 | ID=Msa1458250-mRNA-1:cds;Parent=Msa1458250-mRNA-1 |
| tig0039490 | CDS | 6894 | 6995 | 6894 | ID=Msa1458250-mRNA-1:cds;Parent=Msa1458250-mRNA-1 |
| tig0039490 | three_prime_UTR | 6620 | 6893 | 6620 | ID=Msa1458250-mRNA-1:three_prime_utr;Parent=Msa1458250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
