Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172580 | sp|O22969|Y2416_ARATH | 73.451 | 113 | 30 | 0 | 12 | 124 | 14 | 126 | 7.68e-55 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172580 | A0A072VMF5 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.73e-88 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0172580 | 0.816936 | 4.275390e-52 | -8.615850e-47 |
| Msa0016830 | Msa0172580 | 0.812650 | 3.810887e-51 | -8.615850e-47 |
| Msa0021710 | Msa0172580 | 0.810139 | 1.337252e-50 | -8.615850e-47 |
| Msa0022230 | Msa0172580 | 0.809962 | 1.459615e-50 | -8.615850e-47 |
| Msa0028410 | Msa0172580 | 0.833777 | 4.387889e-56 | -8.615850e-47 |
| Msa0028450 | Msa0172580 | 0.857134 | 2.007692e-62 | -8.615850e-47 |
| Msa0032040 | Msa0172580 | 0.809352 | 1.974763e-50 | -8.615850e-47 |
| Msa0032210 | Msa0172580 | 0.963555 | 3.146441e-122 | -8.615850e-47 |
| Msa0034800 | Msa0172580 | 0.814035 | 1.891403e-51 | -8.615850e-47 |
| Msa0046090 | Msa0172580 | 0.823796 | 1.142261e-53 | -8.615850e-47 |
| Msa0060720 | Msa0172580 | 0.805361 | 1.385282e-49 | -8.615850e-47 |
| Msa0067820 | Msa0172580 | 0.807132 | 5.868573e-50 | -8.615850e-47 |
| Msa0072710 | Msa0172580 | 0.810977 | 8.813153e-51 | -8.615850e-47 |
| Msa0072910 | Msa0172580 | 0.802164 | 6.389395e-49 | -8.615850e-47 |
| Msa0078080 | Msa0172580 | 0.824455 | 7.995400e-54 | -8.615850e-47 |
| Msa0084550 | Msa0172580 | 0.818238 | 2.176023e-52 | -8.615850e-47 |
| Msa0089410 | Msa0172580 | 0.832925 | 7.155825e-56 | -8.615850e-47 |
| Msa0092750 | Msa0172580 | 0.863707 | 2.054837e-64 | -8.615850e-47 |
| Msa0094240 | Msa0172580 | 0.840177 | 1.017456e-57 | -8.615850e-47 |
| Msa0094990 | Msa0172580 | 0.802846 | 4.621171e-49 | -8.615850e-47 |
| Msa0097490 | Msa0172580 | 0.814194 | 1.744088e-51 | -8.615850e-47 |
| Msa0114960 | Msa0172580 | 0.849993 | 2.263120e-60 | -8.615850e-47 |
| Msa0116950 | Msa0172580 | 0.808390 | 3.171737e-50 | -8.615850e-47 |
| Msa0118250 | Msa0172580 | 0.810299 | 1.235276e-50 | -8.615850e-47 |
| Msa0121080 | Msa0172580 | 0.804502 | 2.095005e-49 | -8.615850e-47 |
| Msa0124070 | Msa0172580 | 0.856769 | 2.572212e-62 | -8.615850e-47 |
| Msa0130620 | Msa0172580 | 0.816959 | 4.225002e-52 | -8.615850e-47 |
| Msa0136520 | Msa0172580 | 0.833594 | 4.876203e-56 | -8.615850e-47 |
| Msa0138340 | Msa0172580 | 0.805289 | 1.434514e-49 | -8.615850e-47 |
| Msa0143360 | Msa0172580 | 0.825465 | 4.618552e-54 | -8.615850e-47 |
| Msa0147960 | Msa0172580 | 0.805176 | 1.514398e-49 | -8.615850e-47 |
| Msa0151780 | Msa0172580 | 0.809564 | 1.777682e-50 | -8.615850e-47 |
| Msa0156780 | Msa0172580 | 0.806662 | 7.378649e-50 | -8.615850e-47 |
| Msa0160470 | Msa0172580 | 0.825774 | 3.901233e-54 | -8.615850e-47 |
| Msa0164580 | Msa0172580 | 0.802514 | 5.411551e-49 | -8.615850e-47 |
| Msa0164630 | Msa0172580 | 0.811763 | 5.948308e-51 | -8.615850e-47 |
| Msa0169330 | Msa0172580 | 0.801670 | 8.070023e-49 | -8.615850e-47 |
| Msa0170730 | Msa0172580 | 0.801031 | 1.090765e-48 | -8.615850e-47 |
| Msa0172530 | Msa0172580 | 0.983473 | 7.723340e-158 | -8.615850e-47 |
| Msa0172580 | Msa0174800 | 0.819268 | 1.270018e-52 | -8.615850e-47 |
| Msa0172580 | Msa0176530 | 0.816555 | 5.205325e-52 | -8.615850e-47 |
| Msa0172580 | Msa0186380 | 0.834353 | 3.148930e-56 | -8.615850e-47 |
| Msa0172580 | Msa0186750 | 0.843549 | 1.308704e-58 | -8.615850e-47 |
| Msa0172580 | Msa0190400 | 0.802630 | 5.120282e-49 | -8.615850e-47 |
| Msa0172580 | Msa0197600 | 0.830467 | 2.888592e-55 | -8.615850e-47 |
| Msa0172580 | Msa0201910 | 0.820282 | 7.446308e-53 | -8.615850e-47 |
| Msa0172580 | Msa0206600 | 0.822277 | 2.582275e-53 | -8.615850e-47 |
| Msa0172580 | Msa0219140 | 0.829223 | 5.804019e-55 | -8.615850e-47 |
| Msa0172580 | Msa0225050 | 0.828510 | 8.636236e-55 | -8.615850e-47 |
| Msa0172580 | Msa0227960 | 0.810401 | 1.173759e-50 | -8.615850e-47 |
| Msa0172580 | Msa0240290 | 0.828009 | 1.140950e-54 | -8.615850e-47 |
| Msa0172580 | Msa0243160 | 0.801026 | 1.093280e-48 | -8.615850e-47 |
| Msa0172580 | Msa0244320 | 0.804684 | 1.919166e-49 | -8.615850e-47 |
| Msa0172580 | Msa0249670 | 0.846982 | 1.542095e-59 | -8.615850e-47 |
| Msa0172580 | Msa0258960 | 0.818528 | 1.870514e-52 | -8.615850e-47 |
| Msa0172580 | Msa0266120 | 0.833545 | 5.015602e-56 | -8.615850e-47 |
| Msa0172580 | Msa0267130 | 0.817268 | 3.601614e-52 | -8.615850e-47 |
| Msa0172580 | Msa0274870 | 0.803092 | 4.111688e-49 | -8.615850e-47 |
| Msa0172580 | Msa0278080 | 0.840209 | 9.980548e-58 | -8.615850e-47 |
| Msa0172580 | Msa0282880 | 0.806434 | 8.240839e-50 | -8.615850e-47 |
| Msa0172580 | Msa0292150 | 0.800009 | 1.762167e-48 | -8.615850e-47 |
| Msa0172580 | Msa0292300 | 0.801450 | 8.951983e-49 | -8.615850e-47 |
| Msa0172580 | Msa0298180 | 0.802600 | 5.194947e-49 | -8.615850e-47 |
| Msa0172580 | Msa0304040 | 0.814456 | 1.526553e-51 | -8.615850e-47 |
| Msa0172580 | Msa0305810 | 0.820099 | 8.202223e-53 | -8.615850e-47 |
| Msa0172580 | Msa0307490 | 0.801592 | 8.373252e-49 | -8.615850e-47 |
| Msa0172580 | Msa0307750 | 0.801551 | 8.535454e-49 | -8.615850e-47 |
| Msa0172580 | Msa0314980 | 0.827197 | 1.786866e-54 | -8.615850e-47 |
| Msa0172580 | Msa0317630 | 0.826458 | 2.683867e-54 | -8.615850e-47 |
| Msa0172580 | Msa0327870 | 0.840720 | 7.334636e-58 | -8.615850e-47 |
| Msa0172580 | Msa0330370 | 0.805801 | 1.119963e-49 | -8.615850e-47 |
| Msa0172580 | Msa0335860 | 0.821003 | 5.086941e-53 | -8.615850e-47 |
| Msa0172580 | Msa0341710 | 0.810689 | 1.017311e-50 | -8.615850e-47 |
| Msa0172580 | Msa0351600 | 0.835198 | 1.929777e-56 | -8.615850e-47 |
| Msa0172580 | Msa0358720 | 0.805366 | 1.382342e-49 | -8.615850e-47 |
| Msa0172580 | Msa0372550 | 0.827702 | 1.351902e-54 | -8.615850e-47 |
| Msa0172580 | Msa0373950 | 0.800157 | 1.644249e-48 | -8.615850e-47 |
| Msa0172580 | Msa0378570 | 0.815971 | 7.032984e-52 | -8.615850e-47 |
| Msa0172580 | Msa0384570 | 0.814125 | 1.806150e-51 | -8.615850e-47 |
| Msa0172580 | Msa0385870 | 0.847014 | 1.511769e-59 | -8.615850e-47 |
| Msa0172580 | Msa0386390 | 0.836239 | 1.051535e-56 | -8.615850e-47 |
| Msa0172580 | Msa0387120 | 0.826364 | 2.825233e-54 | -8.615850e-47 |
| Msa0172580 | Msa0403670 | 0.816335 | 5.832404e-52 | -8.615850e-47 |
| Msa0172580 | Msa0404330 | 0.809877 | 1.522484e-50 | -8.615850e-47 |
| Msa0172580 | Msa0404860 | 0.801962 | 7.028771e-49 | -8.615850e-47 |
| Msa0172580 | Msa0405040 | 0.817253 | 3.629530e-52 | -8.615850e-47 |
| Msa0172580 | Msa0414990 | 0.801431 | 9.032408e-49 | -8.615850e-47 |
| Msa0172580 | Msa0420280 | 0.812040 | 5.179193e-51 | -8.615850e-47 |
| Msa0172580 | Msa0421100 | 0.805569 | 1.252752e-49 | -8.615850e-47 |
| Msa0172580 | Msa0425080 | 0.801577 | 8.433718e-49 | -8.615850e-47 |
| Msa0172580 | Msa0431310 | 0.807586 | 4.701804e-50 | -8.615850e-47 |
| Msa0172580 | Msa0434630 | 0.802297 | 5.997064e-49 | -8.615850e-47 |
| Msa0172580 | Msa0449030 | 0.801501 | 8.739874e-49 | -8.615850e-47 |
| Msa0172580 | Msa0453310 | 0.817639 | 2.971193e-52 | -8.615850e-47 |
| Msa0172580 | Msa0468050 | -0.807753 | 4.334057e-50 | -8.615850e-47 |
| Msa0172580 | Msa0469840 | 0.802537 | 5.352554e-49 | -8.615850e-47 |
| Msa0172580 | Msa0471080 | 0.829956 | 3.849664e-55 | -8.615850e-47 |
| Msa0172580 | Msa0474220 | 0.801301 | 9.604634e-49 | -8.615850e-47 |
| Msa0172580 | Msa0475080 | 0.804910 | 1.721478e-49 | -8.615850e-47 |
| Msa0172580 | Msa0476490 | 0.802833 | 4.650527e-49 | -8.615850e-47 |
| Msa0172580 | Msa0479790 | 0.837670 | 4.531394e-57 | -8.615850e-47 |
| Msa0172580 | Msa0481580 | 0.812394 | 4.334861e-51 | -8.615850e-47 |
| Msa0172580 | Msa0482020 | 0.806807 | 6.874000e-50 | -8.615850e-47 |
| Msa0172580 | Msa0483090 | 0.806258 | 8.977491e-50 | -8.615850e-47 |
| Msa0172580 | Msa0498320 | 0.803196 | 3.913155e-49 | -8.615850e-47 |
| Msa0172580 | Msa0513500 | 0.814772 | 1.299722e-51 | -8.615850e-47 |
| Msa0172580 | Msa0513660 | 0.805377 | 1.374710e-49 | -8.615850e-47 |
| Msa0172580 | Msa0515420 | 0.833491 | 5.172195e-56 | -8.615850e-47 |
| Msa0172580 | Msa0515830 | 0.813443 | 2.552881e-51 | -8.615850e-47 |
| Msa0172580 | Msa0522510 | 0.803863 | 2.845034e-49 | -8.615850e-47 |
| Msa0172580 | Msa0523400 | 0.826119 | 3.231832e-54 | -8.615850e-47 |
| Msa0172580 | Msa0527210 | 0.807513 | 4.872265e-50 | -8.615850e-47 |
| Msa0172580 | Msa0528170 | 0.814591 | 1.425414e-51 | -8.615850e-47 |
| Msa0172580 | Msa0532910 | 0.839734 | 1.327604e-57 | -8.615850e-47 |
| Msa0172580 | Msa0538100 | 0.818564 | 1.835332e-52 | -8.615850e-47 |
| Msa0172580 | Msa0545910 | 0.800308 | 1.532040e-48 | -8.615850e-47 |
| Msa0172580 | Msa0553940 | 0.810735 | 9.942045e-51 | -8.615850e-47 |
| Msa0172580 | Msa0558220 | 0.814713 | 1.339330e-51 | -8.615850e-47 |
| Msa0172580 | Msa0565930 | 0.840793 | 7.017857e-58 | -8.615850e-47 |
| Msa0172580 | Msa0568810 | 0.817982 | 2.486205e-52 | -8.615850e-47 |
| Msa0172580 | Msa0569630 | 0.801900 | 7.238092e-49 | -8.615850e-47 |
| Msa0172580 | Msa0571220 | 0.821660 | 3.588200e-53 | -8.615850e-47 |
| Msa0172580 | Msa0573970 | 0.800105 | 1.684330e-48 | -8.615850e-47 |
| Msa0172580 | Msa0577140 | 0.808303 | 3.310156e-50 | -8.615850e-47 |
| Msa0172580 | Msa0581190 | 0.804436 | 2.162217e-49 | -8.615850e-47 |
| Msa0172580 | Msa0583810 | 0.820159 | 7.949313e-53 | -8.615850e-47 |
| Msa0172580 | Msa0585770 | 0.816289 | 5.969712e-52 | -8.615850e-47 |
| Msa0172580 | Msa0587060 | 0.852310 | 5.021781e-61 | -8.615850e-47 |
| Msa0172580 | Msa0608940 | 0.801218 | 9.988631e-49 | -8.615850e-47 |
| Msa0172580 | Msa0618260 | 0.807229 | 5.597507e-50 | -8.615850e-47 |
| Msa0172580 | Msa0621870 | 0.820863 | 5.477016e-53 | -8.615850e-47 |
| Msa0172580 | Msa0624260 | 0.813019 | 3.164080e-51 | -8.615850e-47 |
| Msa0172580 | Msa0624360 | 0.810367 | 1.193786e-50 | -8.615850e-47 |
| Msa0172580 | Msa0624890 | 0.818833 | 1.594745e-52 | -8.615850e-47 |
| Msa0172580 | Msa0626890 | 0.817925 | 2.560349e-52 | -8.615850e-47 |
| Msa0172580 | Msa0648410 | 0.841033 | 6.070603e-58 | -8.615850e-47 |
| Msa0172580 | Msa0657820 | 0.810836 | 9.456117e-51 | -8.615850e-47 |
| Msa0172580 | Msa0663580 | 0.811349 | 7.318676e-51 | -8.615850e-47 |
| Msa0172580 | Msa0663650 | 0.805549 | 1.265110e-49 | -8.615850e-47 |
| Msa0172580 | Msa0665010 | 0.831587 | 1.533870e-55 | -8.615850e-47 |
| Msa0172580 | Msa0667710 | 0.840551 | 8.121048e-58 | -8.615850e-47 |
| Msa0172580 | Msa0677110 | 0.801490 | 8.786181e-49 | -8.615850e-47 |
| Msa0172580 | Msa0677590 | 0.825633 | 4.214433e-54 | -8.615850e-47 |
| Msa0172580 | Msa0681040 | 0.812261 | 4.633967e-51 | -8.615850e-47 |
| Msa0172580 | Msa0688760 | 0.813141 | 2.973781e-51 | -8.615850e-47 |
| Msa0172580 | Msa0690920 | 0.841206 | 5.469312e-58 | -8.615850e-47 |
| Msa0172580 | Msa0697230 | 0.806703 | 7.231141e-50 | -8.615850e-47 |
| Msa0172580 | Msa0704750 | 0.822606 | 2.165354e-53 | -8.615850e-47 |
| Msa0172580 | Msa0706710 | 0.806702 | 7.236566e-50 | -8.615850e-47 |
| Msa0172580 | Msa0714200 | 0.802009 | 6.873726e-49 | -8.615850e-47 |
| Msa0172580 | Msa0715050 | 0.817757 | 2.794213e-52 | -8.615850e-47 |
| Msa0172580 | Msa0720850 | 0.810299 | 1.235123e-50 | -8.615850e-47 |
| Msa0172580 | Msa0724120 | 0.804359 | 2.244113e-49 | -8.615850e-47 |
| Msa0172580 | Msa0743630 | 0.839119 | 1.916824e-57 | -8.615850e-47 |
| Msa0172580 | Msa0747900 | 0.838415 | 2.915876e-57 | -8.615850e-47 |
| Msa0172580 | Msa0756440 | 0.800712 | 1.267019e-48 | -8.615850e-47 |
| Msa0172580 | Msa0761930 | 0.814599 | 1.419211e-51 | -8.615850e-47 |
| Msa0172580 | Msa0804930 | 0.819282 | 1.260521e-52 | -8.615850e-47 |
| Msa0172580 | Msa0822800 | 0.801485 | 8.807843e-49 | -8.615850e-47 |
| Msa0172580 | Msa0824750 | 0.814056 | 1.871365e-51 | -8.615850e-47 |
| Msa0172580 | Msa0834160 | 0.808080 | 3.691677e-50 | -8.615850e-47 |
| Msa0172580 | Msa0846180 | 0.810129 | 1.343682e-50 | -8.615850e-47 |
| Msa0172580 | Msa0863780 | 0.832416 | 9.572627e-56 | -8.615850e-47 |
| Msa0172580 | Msa0868040 | 0.802680 | 5.002059e-49 | -8.615850e-47 |
| Msa0172580 | Msa0873070 | 0.803140 | 4.018245e-49 | -8.615850e-47 |
| Msa0172580 | Msa0880060 | 0.829760 | 4.299101e-55 | -8.615850e-47 |
| Msa0172580 | Msa0880370 | 0.823299 | 1.492566e-53 | -8.615850e-47 |
| Msa0172580 | Msa0883880 | 0.829509 | 4.946677e-55 | -8.615850e-47 |
| Msa0172580 | Msa0899080 | 0.802909 | 4.486095e-49 | -8.615850e-47 |
| Msa0172580 | Msa0911440 | 0.812348 | 4.435688e-51 | -8.615850e-47 |
| Msa0172580 | Msa0911490 | 0.807265 | 5.500845e-50 | -8.615850e-47 |
| Msa0172580 | Msa0930150 | 0.800933 | 1.142357e-48 | -8.615850e-47 |
| Msa0172580 | Msa0932040 | 0.833441 | 5.323876e-56 | -8.615850e-47 |
| Msa0172580 | Msa0967260 | 0.835997 | 1.211575e-56 | -8.615850e-47 |
| Msa0172580 | Msa0967920 | 0.816125 | 6.498302e-52 | -8.615850e-47 |
| Msa0172580 | Msa0968970 | 0.802412 | 5.678943e-49 | -8.615850e-47 |
| Msa0172580 | Msa0970160 | 0.824156 | 9.403079e-54 | -8.615850e-47 |
| Msa0172580 | Msa0975460 | 0.814567 | 1.442648e-51 | -8.615850e-47 |
| Msa0172580 | Msa0985570 | 0.804701 | 1.903917e-49 | -8.615850e-47 |
| Msa0172580 | Msa1014530 | 0.813583 | 2.378706e-51 | -8.615850e-47 |
| Msa0172580 | Msa1015020 | 0.821700 | 3.512129e-53 | -8.615850e-47 |
| Msa0172580 | Msa1022660 | 0.826508 | 2.609834e-54 | -8.615850e-47 |
| Msa0172580 | Msa1033460 | 0.825233 | 5.242056e-54 | -8.615850e-47 |
| Msa0172580 | Msa1038040 | 0.827435 | 1.567453e-54 | -8.615850e-47 |
| Msa0172580 | Msa1038420 | 0.800051 | 1.727735e-48 | -8.615850e-47 |
| Msa0172580 | Msa1041620 | 0.848261 | 6.859681e-60 | -8.615850e-47 |
| Msa0172580 | Msa1042380 | 0.826782 | 2.245515e-54 | -8.615850e-47 |
| Msa0172580 | Msa1055490 | 0.802555 | 5.307982e-49 | -8.615850e-47 |
| Msa0172580 | Msa1066980 | 0.809256 | 2.069729e-50 | -8.615850e-47 |
| Msa0172580 | Msa1068110 | 0.802926 | 4.448875e-49 | -8.615850e-47 |
| Msa0172580 | Msa1070930 | 0.811790 | 5.870735e-51 | -8.615850e-47 |
| Msa0172580 | Msa1071380 | 0.801371 | 9.292380e-49 | -8.615850e-47 |
| Msa0172580 | Msa1072640 | 0.822938 | 1.811722e-53 | -8.615850e-47 |
| Msa0172580 | Msa1073140 | 0.844288 | 8.293624e-59 | -8.615850e-47 |
| Msa0172580 | Msa1081650 | 0.837438 | 5.197313e-57 | -8.615850e-47 |
| Msa0172580 | Msa1085370 | 0.837425 | 5.238857e-57 | -8.615850e-47 |
| Msa0172580 | Msa1106830 | 0.806622 | 7.523414e-50 | -8.615850e-47 |
| Msa0172580 | Msa1113780 | 0.808988 | 2.363104e-50 | -8.615850e-47 |
| Msa0172580 | Msa1125100 | 0.827874 | 1.229045e-54 | -8.615850e-47 |
| Msa0172580 | Msa1125150 | 0.827586 | 1.441869e-54 | -8.615850e-47 |
| Msa0172580 | Msa1126980 | 0.804851 | 1.771063e-49 | -8.615850e-47 |
| Msa0172580 | Msa1127530 | 0.817340 | 3.469088e-52 | -8.615850e-47 |
| Msa0172580 | Msa1130070 | 0.815467 | 9.108484e-52 | -8.615850e-47 |
| Msa0172580 | Msa1140940 | 0.804566 | 2.030933e-49 | -8.615850e-47 |
| Msa0172580 | Msa1144470 | 0.819640 | 1.044232e-52 | -8.615850e-47 |
| Msa0172580 | Msa1147190 | 0.806177 | 9.336984e-50 | -8.615850e-47 |
| Msa0172580 | Msa1147870 | 0.825869 | 3.704373e-54 | -8.615850e-47 |
| Msa0172580 | Msa1150250 | 0.804336 | 2.268096e-49 | -8.615850e-47 |
| Msa0172580 | Msa1160470 | 0.833790 | 4.355929e-56 | -8.615850e-47 |
| Msa0172580 | Msa1161520 | 0.800239 | 1.581834e-48 | -8.615850e-47 |
| Msa0172580 | Msa1165330 | 0.806354 | 8.567034e-50 | -8.615850e-47 |
| Msa0172580 | Msa1166020 | 0.804068 | 2.579790e-49 | -8.615850e-47 |
| Msa0172580 | Msa1166520 | 0.841117 | 5.770135e-58 | -8.615850e-47 |
| Msa0172580 | Msa1182950 | 0.806130 | 9.550625e-50 | -8.615850e-47 |
| Msa0172580 | Msa1182960 | 0.801999 | 6.908422e-49 | -8.615850e-47 |
| Msa0172580 | Msa1185030 | 0.801977 | 6.981227e-49 | -8.615850e-47 |
| Msa0172580 | Msa1185040 | 0.832783 | 7.762184e-56 | -8.615850e-47 |
| Msa0172580 | Msa1186010 | 0.803248 | 3.816725e-49 | -8.615850e-47 |
| Msa0172580 | Msa1193680 | 0.805111 | 1.563034e-49 | -8.615850e-47 |
| Msa0172580 | Msa1196990 | 0.800005 | 1.765134e-48 | -8.615850e-47 |
| Msa0172580 | Msa1197210 | 0.808558 | 2.920047e-50 | -8.615850e-47 |
| Msa0172580 | Msa1198280 | 0.815710 | 8.042292e-52 | -8.615850e-47 |
| Msa0172580 | Msa1199690 | 0.850168 | 2.021987e-60 | -8.615850e-47 |
| Msa0172580 | Msa1203840 | 0.825717 | 4.024943e-54 | -8.615850e-47 |
| Msa0172580 | Msa1203860 | 0.816455 | 5.481128e-52 | -8.615850e-47 |
| Msa0172580 | Msa1209390 | 0.805523 | 1.280963e-49 | -8.615850e-47 |
| Msa0172580 | Msa1209650 | 0.833321 | 5.704470e-56 | -8.615850e-47 |
| Msa0172580 | Msa1215790 | 0.806108 | 9.652048e-50 | -8.615850e-47 |
| Msa0172580 | Msa1223050 | 0.804172 | 2.453522e-49 | -8.615850e-47 |
| Msa0172580 | Msa1223520 | 0.804556 | 2.041151e-49 | -8.615850e-47 |
| Msa0172580 | Msa1223600 | 0.817766 | 2.781165e-52 | -8.615850e-47 |
| Msa0172580 | Msa1224310 | 0.813266 | 2.792358e-51 | -8.615850e-47 |
| Msa0172580 | Msa1229880 | 0.815581 | 8.589768e-52 | -8.615850e-47 |
| Msa0172580 | Msa1236090 | 0.818531 | 1.867677e-52 | -8.615850e-47 |
| Msa0172580 | Msa1240240 | 0.808333 | 3.260992e-50 | -8.615850e-47 |
| Msa0172580 | Msa1249740 | 0.809156 | 2.175172e-50 | -8.615850e-47 |
| Msa0172580 | Msa1252220 | 0.810186 | 1.306275e-50 | -8.615850e-47 |
| Msa0172580 | Msa1260240 | 0.808821 | 2.564940e-50 | -8.615850e-47 |
| Msa0172580 | Msa1263600 | 0.806779 | 6.971102e-50 | -8.615850e-47 |
| Msa0172580 | Msa1263970 | 0.807058 | 6.084227e-50 | -8.615850e-47 |
| Msa0172580 | Msa1265990 | 0.815016 | 1.147052e-51 | -8.615850e-47 |
| Msa0172580 | Msa1267800 | 0.844081 | 9.427402e-59 | -8.615850e-47 |
| Msa0172580 | Msa1269370 | 0.805484 | 1.305310e-49 | -8.615850e-47 |
| Msa0172580 | Msa1279240 | 0.857053 | 2.121271e-62 | -8.615850e-47 |
| Msa0172580 | Msa1298740 | 0.814060 | 1.867543e-51 | -8.615850e-47 |
| Msa0172580 | Msa1303130 | 0.824369 | 8.378591e-54 | -8.615850e-47 |
| Msa0172580 | Msa1310620 | 0.810628 | 1.048723e-50 | -8.615850e-47 |
| Msa0172580 | Msa1316090 | 0.803797 | 2.936372e-49 | -8.615850e-47 |
| Msa0172580 | Msa1317340 | 0.805859 | 1.088966e-49 | -8.615850e-47 |
| Msa0172580 | Msa1319520 | 0.815592 | 8.541589e-52 | -8.615850e-47 |
| Msa0172580 | Msa1319710 | 0.809029 | 2.315187e-50 | -8.615850e-47 |
| Msa0172580 | Msa1320660 | 0.813219 | 2.859905e-51 | -8.615850e-47 |
| Msa0172580 | Msa1330910 | 0.822705 | 2.052752e-53 | -8.615850e-47 |
| Msa0172580 | Msa1334020 | 0.803613 | 3.205886e-49 | -8.615850e-47 |
| Msa0172580 | Msa1342080 | 0.807684 | 4.481858e-50 | -8.615850e-47 |
| Msa0172580 | Msa1348770 | 0.801587 | 8.393360e-49 | -8.615850e-47 |
| Msa0172580 | Msa1350350 | 0.807944 | 3.946854e-50 | -8.615850e-47 |
| Msa0172580 | Msa1351370 | 0.811072 | 8.406462e-51 | -8.615850e-47 |
| Msa0172580 | Msa1356500 | 0.829509 | 4.946183e-55 | -8.615850e-47 |
| Msa0172580 | Msa1357760 | 0.828937 | 6.807819e-55 | -8.615850e-47 |
| Msa0172580 | Msa1361090 | 0.843273 | 1.550672e-58 | -8.615850e-47 |
| Msa0172580 | Msa1364850 | 0.812046 | 5.162500e-51 | -8.615850e-47 |
| Msa0172580 | Msa1370830 | 0.830120 | 3.512529e-55 | -8.615850e-47 |
| Msa0172580 | Msa1373570 | 0.802536 | 5.354336e-49 | -8.615850e-47 |
| Msa0172580 | Msa1374610 | 0.829027 | 6.475839e-55 | -8.615850e-47 |
| Msa0172580 | Msa1379360 | 0.803873 | 2.832101e-49 | -8.615850e-47 |
| Msa0172580 | Msa1384980 | 0.816730 | 4.756261e-52 | -8.615850e-47 |
| Msa0172580 | Msa1388270 | 0.800767 | 1.234921e-48 | -8.615850e-47 |
| Msa0172580 | Msa1391600 | 0.813814 | 2.115735e-51 | -8.615850e-47 |
| Msa0172580 | Msa1392570 | 0.800098 | 1.690350e-48 | -8.615850e-47 |
| Msa0172580 | Msa1396310 | 0.806331 | 8.662335e-50 | -8.615850e-47 |
| Msa0172580 | Msa1397550 | 0.831304 | 1.800874e-55 | -8.615850e-47 |
| Msa0172580 | Msa1414280 | 0.810193 | 1.301566e-50 | -8.615850e-47 |
| Msa0172580 | Msa1418010 | 0.806957 | 6.390461e-50 | -8.615850e-47 |
| Msa0172580 | Msa1420130 | 0.807837 | 4.158562e-50 | -8.615850e-47 |
| Msa0172580 | Msa1420630 | 0.838611 | 2.593967e-57 | -8.615850e-47 |
| Msa0172580 | Msa1425570 | 0.837703 | 4.445463e-57 | -8.615850e-47 |
| Msa0172580 | Msa1426870 | 0.809436 | 1.894326e-50 | -8.615850e-47 |
| Msa0172580 | Msa1427020 | 0.812603 | 3.901408e-51 | -8.615850e-47 |
| Msa0172580 | Msa1428990 | 0.819036 | 1.433835e-52 | -8.615850e-47 |
| Msa0172580 | Msa1432350 | 0.812577 | 3.953422e-51 | -8.615850e-47 |
| Msa0172580 | Msa1435690 | 0.810987 | 8.768737e-51 | -8.615850e-47 |
| Msa0172580 | Msa1449510 | 0.818279 | 2.130108e-52 | -8.615850e-47 |
| Msa0172580 | Msa1451780 | 0.831433 | 1.674453e-55 | -8.615850e-47 |
| Msa0172580 | Msa1458250 | 0.967463 | 2.598080e-127 | -8.615850e-47 |
| Msa0172580 | Msa1465380 | 0.814452 | 1.529374e-51 | -8.615850e-47 |
| Msa0172580 | Msa1465410 | 0.825335 | 4.958796e-54 | -8.615850e-47 |
| Msa0172580 | Msa1466170 | 0.823475 | 1.357434e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172580 | MtrunA17_Chr1g0190531 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 5.27e-92 | 261 |
| Msa0172580 | MtrunA17_Chr2g0332861 | 82.000 | 100 | 18 | 0 | 13 | 112 | 19 | 118 | 2.19e-56 | 172 |
| Msa0172580 | MtrunA17_Chr4g0003571 | 75.455 | 110 | 22 | 1 | 8 | 112 | 4 | 113 | 1.15e-54 | 167 |
| Msa0172580 | MtrunA17_Chr5g0395021 | 57.143 | 91 | 39 | 0 | 20 | 110 | 41 | 131 | 1.37e-29 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172580 | AT3G04620.1 | 89.109 | 101 | 11 | 0 | 14 | 114 | 33 | 133 | 3.74e-63 | 190 |
| Msa0172580 | AT2G34160.1 | 73.451 | 113 | 30 | 0 | 12 | 124 | 14 | 126 | 7.80e-56 | 171 |
| Msa0172580 | AT1G29250.1 | 77.228 | 101 | 23 | 0 | 12 | 112 | 14 | 114 | 4.53e-53 | 163 |
Find 48 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATTCTGTTCTTCTTA+TGG | 0.143902 | 1_4:+57685915 | None:intergenic |
| AAACATCATATATTATAATA+TGG | 0.229375 | 1_4:-57684589 | Msa0172580:three_prime_UTR |
| ATTCATGGACGTAAGTAAAT+AGG | 0.243793 | 1_4:-57684520 | Msa0172580:three_prime_UTR |
| CTGAATTCTGTTCTTCTTAT+GGG | 0.253699 | 1_4:+57685916 | None:intergenic |
| TCAGTAGCTGCTTCTGATTC+AGG | 0.262383 | 1_4:+57684626 | None:intergenic |
| TCATTTGCAGTTTCAGTTAC+AGG | 0.276939 | 1_4:+57685941 | None:intergenic |
| GTCAGTGCCTTGTTTATATA+AGG | 0.295046 | 1_4:+57686027 | None:intergenic |
| GTAACGGTAAAGTAGTTTAA+TGG | 0.315122 | 1_4:+57686004 | None:intergenic |
| CCATAAGAAGAACAGAATTC+AGG | 0.338440 | 1_4:-57685915 | Msa0172580:CDS |
| TTCATGGACGTAAGTAAATA+GGG | 0.345558 | 1_4:-57684519 | Msa0172580:three_prime_UTR |
| GTAAAAGAAAAGTGGTTTCT+TGG | 0.349846 | 1_4:+57685883 | None:intergenic |
| AATACAATCTAAAGTTATAA+TGG | 0.350985 | 1_4:+57684434 | None:intergenic |
| GAGGTTGAGCTTTCTGCTCT+TGG | 0.357617 | 1_4:-57685465 | Msa0172580:CDS |
| GAGCTTTCTGCTCTTGGAAT+GGG | 0.372225 | 1_4:-57685459 | Msa0172580:intron |
| GAAAAGTGGTTTCTTGGTGT+TGG | 0.373099 | 1_4:+57685889 | None:intergenic |
| TTCCACCTCATAATTGAATC+AGG | 0.388702 | 1_4:+57684325 | None:intergenic |
| TAACGGTAAAGTAGTTTAAT+GGG | 0.430336 | 1_4:+57686005 | None:intergenic |
| AGTAAATAGGGGAGTAGAAA+AGG | 0.430445 | 1_4:-57684507 | Msa0172580:three_prime_UTR |
| TGAGCTTTCTGCTCTTGGAA+TGG | 0.445801 | 1_4:-57685460 | Msa0172580:CDS |
| TTTGTAGATTGAAATTGTGC+TGG | 0.464511 | 1_4:-57684699 | Msa0172580:intron |
| AACATCATATATTATAATAT+GGG | 0.471119 | 1_4:-57684588 | Msa0172580:three_prime_UTR |
| TCCATTGTTCTTCAAAATCT+CGG | 0.472867 | 1_4:+57684991 | None:intergenic |
| AATGAGGGGATCAAAGTTGT+AGG | 0.482695 | 1_4:-57684467 | Msa0172580:three_prime_UTR |
| TTCAGTTACAGGTGCAGCTA+TGG | 0.492084 | 1_4:+57685952 | None:intergenic |
| TCAGGTGTGGTGGTGTCAGC+AGG | 0.492551 | 1_4:+57684644 | None:intergenic |
| CAAAGGTCGGCTTGTGCAGA+AGG | 0.493622 | 1_4:-57684826 | Msa0172580:CDS |
| ACCTCATAATTGAATCAGGT+TGG | 0.502585 | 1_4:+57684329 | None:intergenic |
| GTAAATAGGGGAGTAGAAAA+GGG | 0.509721 | 1_4:-57684506 | Msa0172580:three_prime_UTR |
| CCTCATAATTGAATCAGGTT+GGG | 0.517241 | 1_4:+57684330 | None:intergenic |
| GACATCTACAGTTGGCATGA+AGG | 0.541089 | 1_4:-57684856 | Msa0172580:CDS |
| AGGGGAGTAGAAAAGGGTCG+TGG | 0.541220 | 1_4:-57684500 | Msa0172580:three_prime_UTR |
| CGTGGAGTTCAATGCAATGA+GGG | 0.553178 | 1_4:-57684482 | Msa0172580:three_prime_UTR |
| TGAGAAGTTTGACAATATGA+TGG | 0.556772 | 1_4:-57684669 | Msa0172580:CDS |
| TGCTTCTGATTCAGGTGTGG+TGG | 0.564894 | 1_4:+57684634 | None:intergenic |
| GAAGTATTGACATCTACAGT+TGG | 0.573871 | 1_4:-57684864 | Msa0172580:CDS |
| TTGTAGATTGAAATTGTGCT+GGG | 0.576481 | 1_4:-57684698 | Msa0172580:intron |
| AGATTGACGTAAAAGAAAAG+TGG | 0.580806 | 1_4:+57685875 | None:intergenic |
| GTAATCCTCTGTAACTGTAA+CGG | 0.592251 | 1_4:+57685988 | None:intergenic |
| AGCTGCTTCTGATTCAGGTG+TGG | 0.603045 | 1_4:+57684631 | None:intergenic |
| CTTTACCGTTACAGTTACAG+AGG | 0.610243 | 1_4:-57685993 | Msa0172580:five_prime_UTR |
| TCGTGGAGTTCAATGCAATG+AGG | 0.638219 | 1_4:-57684483 | Msa0172580:three_prime_UTR |
| TGAAGGATGAGAACAAAGGT+CGG | 0.640401 | 1_4:-57684839 | Msa0172580:CDS |
| TCGGCTTGTGCAGAAGGCAA+AGG | 0.641693 | 1_4:-57684820 | Msa0172580:intron |
| TCATGGACGTAAGTAAATAG+GGG | 0.646244 | 1_4:-57684518 | Msa0172580:three_prime_UTR |
| ACTCATGCCTTATATAAACA+AGG | 0.680741 | 1_4:-57686034 | Msa0172580:five_prime_UTR |
| GTGGAGTTCAATGCAATGAG+GGG | 0.682802 | 1_4:-57684481 | Msa0172580:three_prime_UTR |
| ATACATTCAGCAGCACAATG+AGG | 0.717661 | 1_4:-57685484 | Msa0172580:CDS |
| GGCATGAAGGATGAGAACAA+AGG | 0.737049 | 1_4:-57684843 | Msa0172580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATCATATATTATAATA+TGG | - | chr1_4:57685783-57685802 | Msa0172580:intron | 10.0% |
| !! | AACATCATATATTATAATAT+GGG | - | chr1_4:57685784-57685803 | Msa0172580:intron | 10.0% |
| !! | AAACATCATATATTATAATA+TGG | - | chr1_4:57685783-57685802 | Msa0172580:intron | 10.0% |
| !! | AACATCATATATTATAATAT+GGG | - | chr1_4:57685784-57685803 | Msa0172580:intron | 10.0% |
| !! | TAAAAACAATGTAATGTATA+AGG | - | chr1_4:57685172-57685191 | Msa0172580:intron | 15.0% |
| !!! | AATACAATCTAAAGTTATAA+TGG | + | chr1_4:57685941-57685960 | None:intergenic | 15.0% |
| !! | TAAAAACAATGTAATGTATA+AGG | - | chr1_4:57685172-57685191 | Msa0172580:intron | 15.0% |
| !!! | AATACAATCTAAAGTTATAA+TGG | + | chr1_4:57685941-57685960 | None:intergenic | 15.0% |
| !! | AATGATCATTAGATTAAGAT+CGG | - | chr1_4:57684584-57684603 | Msa0172580:three_prime_UTR | 20.0% |
| !! | ATTTACTTACATTACTTTGA+TGG | - | chr1_4:57684771-57684790 | Msa0172580:intron | 20.0% |
| !! | GCTATAGAAAAGAAAAAAAA+TGG | - | chr1_4:57684817-57684836 | Msa0172580:intron | 20.0% |
| !! | CAAATTAAAGACAAAAAGAA+GGG | + | chr1_4:57684965-57684984 | None:intergenic | 20.0% |
| !! | AGAAGAATCCAATTAATAAT+CGG | + | chr1_4:57684993-57685012 | None:intergenic | 20.0% |
| !!! | ATTTTAATGTTAGTTGTTTC+TGG | - | chr1_4:57685070-57685089 | Msa0172580:intron | 20.0% |
| !! | AAAAAGAAAAACAGAAAATG+AGG | - | chr1_4:57685198-57685217 | Msa0172580:intron | 20.0% |
| !! | CTAATCAATTAATGAATGTT+TGG | - | chr1_4:57685477-57685496 | Msa0172580:CDS | 20.0% |
| !! | TGAAAGAAAAAAGACATAAT+TGG | + | chr1_4:57686017-57686036 | None:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTTCTTTCA+AGG | - | chr1_4:57686017-57686036 | Msa0172580:five_prime_UTR | 20.0% |
| !! | AATGATCATTAGATTAAGAT+CGG | - | chr1_4:57684584-57684603 | Msa0172580:three_prime_UTR | 20.0% |
| !! | ATTTACTTACATTACTTTGA+TGG | - | chr1_4:57684771-57684790 | Msa0172580:intron | 20.0% |
| !! | GCTATAGAAAAGAAAAAAAA+TGG | - | chr1_4:57684817-57684836 | Msa0172580:intron | 20.0% |
| !! | CAAATTAAAGACAAAAAGAA+GGG | + | chr1_4:57684965-57684984 | None:intergenic | 20.0% |
| !! | AGAAGAATCCAATTAATAAT+CGG | + | chr1_4:57684993-57685012 | None:intergenic | 20.0% |
| !!! | ATTTTAATGTTAGTTGTTTC+TGG | - | chr1_4:57685070-57685089 | Msa0172580:intron | 20.0% |
| !! | AAAAAGAAAAACAGAAAATG+AGG | - | chr1_4:57685198-57685217 | Msa0172580:intron | 20.0% |
| !! | CTAATCAATTAATGAATGTT+TGG | - | chr1_4:57685477-57685496 | Msa0172580:CDS | 20.0% |
| !! | TGAAAGAAAAAAGACATAAT+TGG | + | chr1_4:57686017-57686036 | None:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTTCTTTCA+AGG | - | chr1_4:57686017-57686036 | Msa0172580:five_prime_UTR | 20.0% |
| ! | TAACGGTAAAGTAGTTTAAT+GGG | + | chr1_4:57684370-57684389 | None:intergenic | 25.0% |
| !! | ATGTAATCTCACTTGATAAT+CGG | - | chr1_4:57684530-57684549 | Msa0172580:three_prime_UTR | 25.0% |
| !! | GACTTTCTTAATTTTAAGCA+CGG | - | chr1_4:57684606-57684625 | Msa0172580:exon | 25.0% |
| ! | TTCAAATTGTGATCAACTAA+TGG | - | chr1_4:57684795-57684814 | Msa0172580:intron | 25.0% |
| ! | AGAAAAGAAAAAAAATGGCT+AGG | - | chr1_4:57684822-57684841 | Msa0172580:CDS | 25.0% |
| !! | ACAAAAAGAAGGGAAATTTT+AGG | + | chr1_4:57684955-57684974 | None:intergenic | 25.0% |
| ! | GCAAATTAAAGACAAAAAGA+AGG | + | chr1_4:57684966-57684985 | None:intergenic | 25.0% |
| !!! | TTACATTGACTTAACTATCA+AGG | - | chr1_4:57685101-57685120 | Msa0172580:intron | 25.0% |
| !!! | TCAAGGCATTATTTTTACTA+TGG | - | chr1_4:57685118-57685137 | Msa0172580:intron | 25.0% |
| !!! | TATTTTTACTATGGTGTGTA+AGG | - | chr1_4:57685127-57685146 | Msa0172580:intron | 25.0% |
| !! | TACTTTTGTTCAATTGATAG+AGG | + | chr1_4:57685249-57685268 | None:intergenic | 25.0% |
| ! | TAGAGTAAGAATATGAAACT+AGG | + | chr1_4:57685288-57685307 | None:intergenic | 25.0% |
| ! | ACAAAAATGTTGACATGAAT+TGG | - | chr1_4:57685329-57685348 | Msa0172580:intron | 25.0% |
| ! | TATAACTCTCATTCATATGA+TGG | - | chr1_4:57685444-57685463 | Msa0172580:intron | 25.0% |
| !! | TGTTGTAATTTTTGCATTCA+TGG | - | chr1_4:57685837-57685856 | Msa0172580:intron | 25.0% |
| ! | TAACGGTAAAGTAGTTTAAT+GGG | + | chr1_4:57684370-57684389 | None:intergenic | 25.0% |
| !! | ATGTAATCTCACTTGATAAT+CGG | - | chr1_4:57684530-57684549 | Msa0172580:three_prime_UTR | 25.0% |
| !! | GACTTTCTTAATTTTAAGCA+CGG | - | chr1_4:57684606-57684625 | Msa0172580:exon | 25.0% |
| ! | TTCAAATTGTGATCAACTAA+TGG | - | chr1_4:57684795-57684814 | Msa0172580:intron | 25.0% |
| ! | AGAAAAGAAAAAAAATGGCT+AGG | - | chr1_4:57684822-57684841 | Msa0172580:CDS | 25.0% |
| !! | ACAAAAAGAAGGGAAATTTT+AGG | + | chr1_4:57684955-57684974 | None:intergenic | 25.0% |
| ! | GCAAATTAAAGACAAAAAGA+AGG | + | chr1_4:57684966-57684985 | None:intergenic | 25.0% |
| !!! | TTACATTGACTTAACTATCA+AGG | - | chr1_4:57685101-57685120 | Msa0172580:intron | 25.0% |
| !!! | TCAAGGCATTATTTTTACTA+TGG | - | chr1_4:57685118-57685137 | Msa0172580:intron | 25.0% |
| !!! | TATTTTTACTATGGTGTGTA+AGG | - | chr1_4:57685127-57685146 | Msa0172580:intron | 25.0% |
| !! | TACTTTTGTTCAATTGATAG+AGG | + | chr1_4:57685249-57685268 | None:intergenic | 25.0% |
| ! | TAGAGTAAGAATATGAAACT+AGG | + | chr1_4:57685288-57685307 | None:intergenic | 25.0% |
| ! | ACAAAAATGTTGACATGAAT+TGG | - | chr1_4:57685329-57685348 | Msa0172580:intron | 25.0% |
| ! | TATAACTCTCATTCATATGA+TGG | - | chr1_4:57685444-57685463 | Msa0172580:intron | 25.0% |
| !! | TGTTGTAATTTTTGCATTCA+TGG | - | chr1_4:57685837-57685856 | Msa0172580:intron | 25.0% |
| GTAACGGTAAAGTAGTTTAA+TGG | + | chr1_4:57684371-57684390 | None:intergenic | 30.0% | |
| CTGAATTCTGTTCTTCTTAT+GGG | + | chr1_4:57684459-57684478 | None:intergenic | 30.0% | |
| GTAAAAGAAAAGTGGTTTCT+TGG | + | chr1_4:57684492-57684511 | None:intergenic | 30.0% | |
| AGATTGACGTAAAAGAAAAG+TGG | + | chr1_4:57684500-57684519 | None:intergenic | 30.0% | |
| ! | TGTAATCTCACTTGATAATC+GGG | - | chr1_4:57684531-57684550 | Msa0172580:three_prime_UTR | 30.0% |
| AATGATCATTGATGTAGTGA+CGG | + | chr1_4:57684574-57684593 | None:intergenic | 30.0% | |
| ACTGTTTAATCTGAATTCAG+CGG | - | chr1_4:57684672-57684691 | Msa0172580:CDS | 30.0% | |
| TTGCACAACCGATTATTAAT+TGG | - | chr1_4:57684982-57685001 | Msa0172580:CDS | 30.0% | |
| AATTGATAGAGGATATCTGT+TGG | + | chr1_4:57685238-57685257 | None:intergenic | 30.0% | |
| TCCATTGTTCTTCAAAATCT+CGG | + | chr1_4:57685384-57685403 | None:intergenic | 30.0% | |
| ! | TGAATTCTCTTCATTTTCGT+CGG | + | chr1_4:57685585-57685604 | None:intergenic | 30.0% |
| CAAAATACCAAGAAAAGTCT+AGG | + | chr1_4:57685657-57685676 | None:intergenic | 30.0% | |
| TTTGTAGATTGAAATTGTGC+TGG | - | chr1_4:57685673-57685692 | Msa0172580:intron | 30.0% | |
| TTGTAGATTGAAATTGTGCT+GGG | - | chr1_4:57685674-57685693 | Msa0172580:intron | 30.0% | |
| TGAGAAGTTTGACAATATGA+TGG | - | chr1_4:57685703-57685722 | Msa0172580:intron | 30.0% | |
| ATTCATGGACGTAAGTAAAT+AGG | - | chr1_4:57685852-57685871 | Msa0172580:intron | 30.0% | |
| TTCATGGACGTAAGTAAATA+GGG | - | chr1_4:57685853-57685872 | Msa0172580:intron | 30.0% | |
| GTAACGGTAAAGTAGTTTAA+TGG | + | chr1_4:57684371-57684390 | None:intergenic | 30.0% | |
| CTGAATTCTGTTCTTCTTAT+GGG | + | chr1_4:57684459-57684478 | None:intergenic | 30.0% | |
| GTAAAAGAAAAGTGGTTTCT+TGG | + | chr1_4:57684492-57684511 | None:intergenic | 30.0% | |
| AGATTGACGTAAAAGAAAAG+TGG | + | chr1_4:57684500-57684519 | None:intergenic | 30.0% | |
| ! | TGTAATCTCACTTGATAATC+GGG | - | chr1_4:57684531-57684550 | Msa0172580:three_prime_UTR | 30.0% |
| AATGATCATTGATGTAGTGA+CGG | + | chr1_4:57684574-57684593 | None:intergenic | 30.0% | |
| ACTGTTTAATCTGAATTCAG+CGG | - | chr1_4:57684672-57684691 | Msa0172580:CDS | 30.0% | |
| TTGCACAACCGATTATTAAT+TGG | - | chr1_4:57684982-57685001 | Msa0172580:CDS | 30.0% | |
| AATTGATAGAGGATATCTGT+TGG | + | chr1_4:57685238-57685257 | None:intergenic | 30.0% | |
| TCCATTGTTCTTCAAAATCT+CGG | + | chr1_4:57685384-57685403 | None:intergenic | 30.0% | |
| ! | TGAATTCTCTTCATTTTCGT+CGG | + | chr1_4:57685585-57685604 | None:intergenic | 30.0% |
| CAAAATACCAAGAAAAGTCT+AGG | + | chr1_4:57685657-57685676 | None:intergenic | 30.0% | |
| TTTGTAGATTGAAATTGTGC+TGG | - | chr1_4:57685673-57685692 | Msa0172580:intron | 30.0% | |
| TTGTAGATTGAAATTGTGCT+GGG | - | chr1_4:57685674-57685693 | Msa0172580:intron | 30.0% | |
| TGAGAAGTTTGACAATATGA+TGG | - | chr1_4:57685703-57685722 | Msa0172580:intron | 30.0% | |
| ATTCATGGACGTAAGTAAAT+AGG | - | chr1_4:57685852-57685871 | Msa0172580:intron | 30.0% | |
| TTCATGGACGTAAGTAAATA+GGG | - | chr1_4:57685853-57685872 | Msa0172580:intron | 30.0% | |
| !! | GTCAGTGCCTTGTTTATATA+AGG | + | chr1_4:57684348-57684367 | None:intergenic | 35.0% |
| GTAATCCTCTGTAACTGTAA+CGG | + | chr1_4:57684387-57684406 | None:intergenic | 35.0% | |
| TCATTTGCAGTTTCAGTTAC+AGG | + | chr1_4:57684434-57684453 | None:intergenic | 35.0% | |
| CCTGAATTCTGTTCTTCTTA+TGG | + | chr1_4:57684460-57684479 | None:intergenic | 35.0% | |
| CCATAAGAAGAACAGAATTC+AGG | - | chr1_4:57684457-57684476 | Msa0172580:three_prime_UTR | 35.0% | |
| CAAGTGAGATTACATTACCT+TGG | + | chr1_4:57684525-57684544 | None:intergenic | 35.0% | |
| TGAATGTATCTCTGCATCAA+AGG | + | chr1_4:57684877-57684896 | None:intergenic | 35.0% | |
| TATGAAACTAGGAACAGATG+AGG | + | chr1_4:57685277-57685296 | None:intergenic | 35.0% | |
| !! | GAAGTATTGACATCTACAGT+TGG | - | chr1_4:57685508-57685527 | Msa0172580:intron | 35.0% |
| ! | TCTTAAGCCTAGACTTTTCT+TGG | - | chr1_4:57685647-57685666 | Msa0172580:intron | 35.0% |
| TCATGGACGTAAGTAAATAG+GGG | - | chr1_4:57685854-57685873 | Msa0172580:intron | 35.0% | |
| AGTAAATAGGGGAGTAGAAA+AGG | - | chr1_4:57685865-57685884 | Msa0172580:intron | 35.0% | |
| GTAAATAGGGGAGTAGAAAA+GGG | - | chr1_4:57685866-57685885 | Msa0172580:intron | 35.0% | |
| !! | GTCAGTGCCTTGTTTATATA+AGG | + | chr1_4:57684348-57684367 | None:intergenic | 35.0% |
| GTAATCCTCTGTAACTGTAA+CGG | + | chr1_4:57684387-57684406 | None:intergenic | 35.0% | |
| TCATTTGCAGTTTCAGTTAC+AGG | + | chr1_4:57684434-57684453 | None:intergenic | 35.0% | |
| CCTGAATTCTGTTCTTCTTA+TGG | + | chr1_4:57684460-57684479 | None:intergenic | 35.0% | |
| CCATAAGAAGAACAGAATTC+AGG | - | chr1_4:57684457-57684476 | Msa0172580:three_prime_UTR | 35.0% | |
| CAAGTGAGATTACATTACCT+TGG | + | chr1_4:57684525-57684544 | None:intergenic | 35.0% | |
| TGAATGTATCTCTGCATCAA+AGG | + | chr1_4:57684877-57684896 | None:intergenic | 35.0% | |
| TATGAAACTAGGAACAGATG+AGG | + | chr1_4:57685277-57685296 | None:intergenic | 35.0% | |
| !! | GAAGTATTGACATCTACAGT+TGG | - | chr1_4:57685508-57685527 | Msa0172580:intron | 35.0% |
| ! | TCTTAAGCCTAGACTTTTCT+TGG | - | chr1_4:57685647-57685666 | Msa0172580:intron | 35.0% |
| TCATGGACGTAAGTAAATAG+GGG | - | chr1_4:57685854-57685873 | Msa0172580:intron | 35.0% | |
| AGTAAATAGGGGAGTAGAAA+AGG | - | chr1_4:57685865-57685884 | Msa0172580:intron | 35.0% | |
| GTAAATAGGGGAGTAGAAAA+GGG | - | chr1_4:57685866-57685885 | Msa0172580:intron | 35.0% | |
| CTTTACCGTTACAGTTACAG+AGG | - | chr1_4:57684379-57684398 | Msa0172580:three_prime_UTR | 40.0% | |
| ! | GAAAAGTGGTTTCTTGGTGT+TGG | + | chr1_4:57684486-57684505 | None:intergenic | 40.0% |
| ! | CTTGATAATCGGGATACCTT+TGG | - | chr1_4:57684541-57684560 | Msa0172580:three_prime_UTR | 40.0% |
| TAGTGACGGTATGAATCCAA+AGG | + | chr1_4:57684560-57684579 | None:intergenic | 40.0% | |
| CATTCATGTAGTCGATGCAT+TGG | + | chr1_4:57684701-57684720 | None:intergenic | 40.0% | |
| ATACATTCAGCAGCACAATG+AGG | - | chr1_4:57684888-57684907 | Msa0172580:intron | 40.0% | |
| !! | GCCGAGATTTTGAAGAACAA+TGG | - | chr1_4:57685380-57685399 | Msa0172580:intron | 40.0% |
| ACTTGCAACTGAGAAGAGTA+AGG | - | chr1_4:57685403-57685422 | Msa0172580:intron | 40.0% | |
| TGAAGGATGAGAACAAAGGT+CGG | - | chr1_4:57685533-57685552 | Msa0172580:intron | 40.0% | |
| AATGAGGGGATCAAAGTTGT+AGG | - | chr1_4:57685905-57685924 | Msa0172580:CDS | 40.0% | |
| CTTTACCGTTACAGTTACAG+AGG | - | chr1_4:57684379-57684398 | Msa0172580:three_prime_UTR | 40.0% | |
| ! | GAAAAGTGGTTTCTTGGTGT+TGG | + | chr1_4:57684486-57684505 | None:intergenic | 40.0% |
| ! | CTTGATAATCGGGATACCTT+TGG | - | chr1_4:57684541-57684560 | Msa0172580:three_prime_UTR | 40.0% |
| TAGTGACGGTATGAATCCAA+AGG | + | chr1_4:57684560-57684579 | None:intergenic | 40.0% | |
| CATTCATGTAGTCGATGCAT+TGG | + | chr1_4:57684701-57684720 | None:intergenic | 40.0% | |
| ATACATTCAGCAGCACAATG+AGG | - | chr1_4:57684888-57684907 | Msa0172580:intron | 40.0% | |
| !! | GCCGAGATTTTGAAGAACAA+TGG | - | chr1_4:57685380-57685399 | Msa0172580:intron | 40.0% |
| ACTTGCAACTGAGAAGAGTA+AGG | - | chr1_4:57685403-57685422 | Msa0172580:intron | 40.0% | |
| TGAAGGATGAGAACAAAGGT+CGG | - | chr1_4:57685533-57685552 | Msa0172580:intron | 40.0% | |
| AATGAGGGGATCAAAGTTGT+AGG | - | chr1_4:57685905-57685924 | Msa0172580:CDS | 40.0% | |
| TTCAGTTACAGGTGCAGCTA+TGG | + | chr1_4:57684423-57684442 | None:intergenic | 45.0% | |
| ! | CTTTTACGTCAATCTCGCCA+AGG | - | chr1_4:57684505-57684524 | Msa0172580:three_prime_UTR | 45.0% |
| TGAGCTTTCTGCTCTTGGAA+TGG | - | chr1_4:57684912-57684931 | Msa0172580:intron | 45.0% | |
| GAGCTTTCTGCTCTTGGAAT+GGG | - | chr1_4:57684913-57684932 | Msa0172580:intron | 45.0% | |
| GACATCTACAGTTGGCATGA+AGG | - | chr1_4:57685516-57685535 | Msa0172580:intron | 45.0% | |
| GGCATGAAGGATGAGAACAA+AGG | - | chr1_4:57685529-57685548 | Msa0172580:intron | 45.0% | |
| TCAGTAGCTGCTTCTGATTC+AGG | + | chr1_4:57685749-57685768 | None:intergenic | 45.0% | |
| TCGTGGAGTTCAATGCAATG+AGG | - | chr1_4:57685889-57685908 | Msa0172580:CDS | 45.0% | |
| CGTGGAGTTCAATGCAATGA+GGG | - | chr1_4:57685890-57685909 | Msa0172580:CDS | 45.0% | |
| GTGGAGTTCAATGCAATGAG+GGG | - | chr1_4:57685891-57685910 | Msa0172580:CDS | 45.0% | |
| TTCAGTTACAGGTGCAGCTA+TGG | + | chr1_4:57684423-57684442 | None:intergenic | 45.0% | |
| ! | CTTTTACGTCAATCTCGCCA+AGG | - | chr1_4:57684505-57684524 | Msa0172580:three_prime_UTR | 45.0% |
| TGAGCTTTCTGCTCTTGGAA+TGG | - | chr1_4:57684912-57684931 | Msa0172580:intron | 45.0% | |
| GAGCTTTCTGCTCTTGGAAT+GGG | - | chr1_4:57684913-57684932 | Msa0172580:intron | 45.0% | |
| GACATCTACAGTTGGCATGA+AGG | - | chr1_4:57685516-57685535 | Msa0172580:intron | 45.0% | |
| GGCATGAAGGATGAGAACAA+AGG | - | chr1_4:57685529-57685548 | Msa0172580:intron | 45.0% | |
| TCAGTAGCTGCTTCTGATTC+AGG | + | chr1_4:57685749-57685768 | None:intergenic | 45.0% | |
| TCGTGGAGTTCAATGCAATG+AGG | - | chr1_4:57685889-57685908 | Msa0172580:CDS | 45.0% | |
| CGTGGAGTTCAATGCAATGA+GGG | - | chr1_4:57685890-57685909 | Msa0172580:CDS | 45.0% | |
| GTGGAGTTCAATGCAATGAG+GGG | - | chr1_4:57685891-57685910 | Msa0172580:CDS | 45.0% | |
| GAGGTTGAGCTTTCTGCTCT+TGG | - | chr1_4:57684907-57684926 | Msa0172580:intron | 50.0% | |
| TGCTTCTGATTCAGGTGTGG+TGG | + | chr1_4:57685741-57685760 | None:intergenic | 50.0% | |
| AGCTGCTTCTGATTCAGGTG+TGG | + | chr1_4:57685744-57685763 | None:intergenic | 50.0% | |
| GAGGTTGAGCTTTCTGCTCT+TGG | - | chr1_4:57684907-57684926 | Msa0172580:intron | 50.0% | |
| TGCTTCTGATTCAGGTGTGG+TGG | + | chr1_4:57685741-57685760 | None:intergenic | 50.0% | |
| AGCTGCTTCTGATTCAGGTG+TGG | + | chr1_4:57685744-57685763 | None:intergenic | 50.0% | |
| !! | CAAAGGTCGGCTTGTGCAGA+AGG | - | chr1_4:57685546-57685565 | Msa0172580:intron | 55.0% |
| ! | TCGGCTTGTGCAGAAGGCAA+AGG | - | chr1_4:57685552-57685571 | Msa0172580:intron | 55.0% |
| AGGGGAGTAGAAAAGGGTCG+TGG | - | chr1_4:57685872-57685891 | Msa0172580:CDS | 55.0% | |
| !! | CAAAGGTCGGCTTGTGCAGA+AGG | - | chr1_4:57685546-57685565 | Msa0172580:intron | 55.0% |
| ! | TCGGCTTGTGCAGAAGGCAA+AGG | - | chr1_4:57685552-57685571 | Msa0172580:intron | 55.0% |
| AGGGGAGTAGAAAAGGGTCG+TGG | - | chr1_4:57685872-57685891 | Msa0172580:CDS | 55.0% | |
| ! | TCAGGTGTGGTGGTGTCAGC+AGG | + | chr1_4:57685731-57685750 | None:intergenic | 60.0% |
| ! | TCAGGTGTGGTGGTGTCAGC+AGG | + | chr1_4:57685731-57685750 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 57684339 | 57686055 | 57684339 | ID=Msa0172580;Name=Msa0172580 |
| chr1_4 | mRNA | 57684339 | 57686055 | 57684339 | ID=Msa0172580-mRNA-1;Parent=Msa0172580;Name=Msa0172580-mRNA-1;_AED=0.23;_eAED=0.23;_QI=74|1|1|1|1|1|5|274|130 |
| chr1_4 | exon | 57684339 | 57684714 | 57684339 | ID=Msa0172580-mRNA-1:exon:17667;Parent=Msa0172580-mRNA-1 |
| chr1_4 | exon | 57684821 | 57684885 | 57684821 | ID=Msa0172580-mRNA-1:exon:17666;Parent=Msa0172580-mRNA-1 |
| chr1_4 | exon | 57684975 | 57685037 | 57684975 | ID=Msa0172580-mRNA-1:exon:17665;Parent=Msa0172580-mRNA-1 |
| chr1_4 | exon | 57685460 | 57685508 | 57685460 | ID=Msa0172580-mRNA-1:exon:17664;Parent=Msa0172580-mRNA-1 |
| chr1_4 | exon | 57685868 | 57686055 | 57685868 | ID=Msa0172580-mRNA-1:exon:17663;Parent=Msa0172580-mRNA-1 |
| chr1_4 | five_prime_UTR | 57685982 | 57686055 | 57685982 | ID=Msa0172580-mRNA-1:five_prime_utr;Parent=Msa0172580-mRNA-1 |
| chr1_4 | CDS | 57685868 | 57685981 | 57685868 | ID=Msa0172580-mRNA-1:cds;Parent=Msa0172580-mRNA-1 |
| chr1_4 | CDS | 57685460 | 57685508 | 57685460 | ID=Msa0172580-mRNA-1:cds;Parent=Msa0172580-mRNA-1 |
| chr1_4 | CDS | 57684975 | 57685037 | 57684975 | ID=Msa0172580-mRNA-1:cds;Parent=Msa0172580-mRNA-1 |
| chr1_4 | CDS | 57684821 | 57684885 | 57684821 | ID=Msa0172580-mRNA-1:cds;Parent=Msa0172580-mRNA-1 |
| chr1_4 | CDS | 57684613 | 57684714 | 57684613 | ID=Msa0172580-mRNA-1:cds;Parent=Msa0172580-mRNA-1 |
| chr1_4 | three_prime_UTR | 57684339 | 57684612 | 57684339 | ID=Msa0172580-mRNA-1:three_prime_utr;Parent=Msa0172580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
