Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172530 | XP_013468965.1 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 5.73e-88 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172530 | sp|O22969|Y2416_ARATH | 73.451 | 113 | 30 | 0 | 12 | 124 | 14 | 126 | 7.68e-55 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172530 | A0A072VMF5 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.73e-88 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0172530 | 0.815443 | 9.221360e-52 | -8.615850e-47 |
| Msa0016830 | Msa0172530 | 0.801649 | 8.148563e-49 | -8.615850e-47 |
| Msa0021710 | Msa0172530 | 0.808435 | 3.101716e-50 | -8.615850e-47 |
| Msa0022230 | Msa0172530 | 0.801661 | 8.103595e-49 | -8.615850e-47 |
| Msa0028410 | Msa0172530 | 0.827508 | 1.504851e-54 | -8.615850e-47 |
| Msa0028450 | Msa0172530 | 0.854895 | 9.077327e-62 | -8.615850e-47 |
| Msa0032040 | Msa0172530 | 0.816631 | 5.005838e-52 | -8.615850e-47 |
| Msa0032210 | Msa0172530 | 0.967604 | 1.659785e-127 | -8.615850e-47 |
| Msa0034800 | Msa0172530 | 0.803434 | 3.492626e-49 | -8.615850e-47 |
| Msa0035090 | Msa0172530 | 0.800289 | 1.545544e-48 | -8.615850e-47 |
| Msa0046090 | Msa0172530 | 0.818110 | 2.325441e-52 | -8.615850e-47 |
| Msa0057740 | Msa0172530 | 0.800190 | 1.618900e-48 | -8.615850e-47 |
| Msa0067820 | Msa0172530 | 0.804492 | 2.105314e-49 | -8.615850e-47 |
| Msa0072710 | Msa0172530 | 0.810318 | 1.223757e-50 | -8.615850e-47 |
| Msa0078080 | Msa0172530 | 0.824762 | 6.769874e-54 | -8.615850e-47 |
| Msa0084550 | Msa0172530 | 0.819618 | 1.056778e-52 | -8.615850e-47 |
| Msa0089410 | Msa0172530 | 0.839241 | 1.782681e-57 | -8.615850e-47 |
| Msa0092750 | Msa0172530 | 0.868580 | 5.876293e-66 | -8.615850e-47 |
| Msa0094240 | Msa0172530 | 0.837148 | 6.168391e-57 | -8.615850e-47 |
| Msa0097490 | Msa0172530 | 0.810903 | 9.145608e-51 | -8.615850e-47 |
| Msa0114960 | Msa0172530 | 0.842055 | 3.265705e-58 | -8.615850e-47 |
| Msa0116950 | Msa0172530 | 0.803771 | 2.973855e-49 | -8.615850e-47 |
| Msa0118250 | Msa0172530 | 0.806622 | 7.524222e-50 | -8.615850e-47 |
| Msa0124070 | Msa0172530 | 0.849420 | 3.270958e-60 | -8.615850e-47 |
| Msa0130620 | Msa0172530 | 0.818389 | 2.010374e-52 | -8.615850e-47 |
| Msa0136520 | Msa0172530 | 0.836327 | 9.986715e-57 | -8.615850e-47 |
| Msa0143360 | Msa0172530 | 0.822376 | 2.448910e-53 | -8.615850e-47 |
| Msa0156780 | Msa0172530 | 0.804134 | 2.498728e-49 | -8.615850e-47 |
| Msa0160470 | Msa0172530 | 0.817562 | 3.091451e-52 | -8.615850e-47 |
| Msa0164630 | Msa0172530 | 0.809966 | 1.456950e-50 | -8.615850e-47 |
| Msa0172530 | Msa0172580 | 0.983473 | 7.723340e-158 | -8.615850e-47 |
| Msa0172530 | Msa0174800 | 0.819175 | 1.333114e-52 | -8.615850e-47 |
| Msa0172530 | Msa0176530 | 0.818354 | 2.047992e-52 | -8.615850e-47 |
| Msa0172530 | Msa0186380 | 0.821845 | 3.251490e-53 | -8.615850e-47 |
| Msa0172530 | Msa0186750 | 0.844771 | 6.148071e-59 | -8.615850e-47 |
| Msa0172530 | Msa0190400 | 0.803036 | 4.221353e-49 | -8.615850e-47 |
| Msa0172530 | Msa0197600 | 0.827729 | 1.331741e-54 | -8.615850e-47 |
| Msa0172530 | Msa0201910 | 0.820398 | 7.004484e-53 | -8.615850e-47 |
| Msa0172530 | Msa0206600 | 0.819035 | 1.434369e-52 | -8.615850e-47 |
| Msa0172530 | Msa0213650 | 0.801980 | 6.968549e-49 | -8.615850e-47 |
| Msa0172530 | Msa0219140 | 0.842266 | 2.872363e-58 | -8.615850e-47 |
| Msa0172530 | Msa0225050 | 0.823811 | 1.133002e-53 | -8.615850e-47 |
| Msa0172530 | Msa0227960 | 0.810390 | 1.180354e-50 | -8.615850e-47 |
| Msa0172530 | Msa0240290 | 0.821672 | 3.564297e-53 | -8.615850e-47 |
| Msa0172530 | Msa0243160 | 0.800517 | 1.388994e-48 | -8.615850e-47 |
| Msa0172530 | Msa0244320 | 0.810542 | 1.094790e-50 | -8.615850e-47 |
| Msa0172530 | Msa0249670 | 0.835901 | 1.281327e-56 | -8.615850e-47 |
| Msa0172530 | Msa0258960 | 0.836724 | 7.914818e-57 | -8.615850e-47 |
| Msa0172530 | Msa0266120 | 0.829441 | 5.138038e-55 | -8.615850e-47 |
| Msa0172530 | Msa0267130 | 0.804701 | 1.903462e-49 | -8.615850e-47 |
| Msa0172530 | Msa0278080 | 0.837771 | 4.270234e-57 | -8.615850e-47 |
| Msa0172530 | Msa0282880 | 0.803954 | 2.723557e-49 | -8.615850e-47 |
| Msa0172530 | Msa0292150 | 0.801892 | 7.265639e-49 | -8.615850e-47 |
| Msa0172530 | Msa0298180 | 0.812988 | 3.213149e-51 | -8.615850e-47 |
| Msa0172530 | Msa0304040 | 0.809711 | 1.653558e-50 | -8.615850e-47 |
| Msa0172530 | Msa0305810 | 0.817331 | 3.486362e-52 | -8.615850e-47 |
| Msa0172530 | Msa0307490 | 0.806988 | 6.293825e-50 | -8.615850e-47 |
| Msa0172530 | Msa0307750 | 0.803308 | 3.708715e-49 | -8.615850e-47 |
| Msa0172530 | Msa0314980 | 0.818798 | 1.624009e-52 | -8.615850e-47 |
| Msa0172530 | Msa0317630 | 0.822828 | 1.922269e-53 | -8.615850e-47 |
| Msa0172530 | Msa0327870 | 0.833500 | 5.145030e-56 | -8.615850e-47 |
| Msa0172530 | Msa0330370 | 0.810301 | 1.233982e-50 | -8.615850e-47 |
| Msa0172530 | Msa0335860 | 0.818534 | 1.864566e-52 | -8.615850e-47 |
| Msa0172530 | Msa0341710 | 0.807377 | 5.208116e-50 | -8.615850e-47 |
| Msa0172530 | Msa0351600 | 0.838238 | 3.238826e-57 | -8.615850e-47 |
| Msa0172530 | Msa0372550 | 0.824328 | 8.566253e-54 | -8.615850e-47 |
| Msa0172530 | Msa0378570 | 0.813797 | 2.133669e-51 | -8.615850e-47 |
| Msa0172530 | Msa0384570 | 0.816258 | 6.067123e-52 | -8.615850e-47 |
| Msa0172530 | Msa0385870 | 0.838730 | 2.417334e-57 | -8.615850e-47 |
| Msa0172530 | Msa0386390 | 0.831280 | 1.825730e-55 | -8.615850e-47 |
| Msa0172530 | Msa0387120 | 0.824862 | 6.413975e-54 | -8.615850e-47 |
| Msa0172530 | Msa0403670 | 0.815116 | 1.090042e-51 | -8.615850e-47 |
| Msa0172530 | Msa0404330 | 0.811135 | 8.144980e-51 | -8.615850e-47 |
| Msa0172530 | Msa0405040 | 0.815590 | 8.553797e-52 | -8.615850e-47 |
| Msa0172530 | Msa0421100 | 0.808899 | 2.468987e-50 | -8.615850e-47 |
| Msa0172530 | Msa0431310 | 0.801317 | 9.530906e-49 | -8.615850e-47 |
| Msa0172530 | Msa0434630 | 0.810833 | 9.468930e-51 | -8.615850e-47 |
| Msa0172530 | Msa0453310 | 0.816427 | 5.561393e-52 | -8.615850e-47 |
| Msa0172530 | Msa0468050 | -0.814354 | 1.608333e-51 | -8.615850e-47 |
| Msa0172530 | Msa0471080 | 0.818782 | 1.637943e-52 | -8.615850e-47 |
| Msa0172530 | Msa0476490 | 0.800509 | 1.393843e-48 | -8.615850e-47 |
| Msa0172530 | Msa0479790 | 0.832780 | 7.775785e-56 | -8.615850e-47 |
| Msa0172530 | Msa0481580 | 0.801972 | 6.996006e-49 | -8.615850e-47 |
| Msa0172530 | Msa0482020 | 0.807887 | 4.057984e-50 | -8.615850e-47 |
| Msa0172530 | Msa0498320 | 0.801346 | 9.401026e-49 | -8.615850e-47 |
| Msa0172530 | Msa0513500 | 0.819776 | 9.724309e-53 | -8.615850e-47 |
| Msa0172530 | Msa0513660 | 0.802076 | 6.659814e-49 | -8.615850e-47 |
| Msa0172530 | Msa0515420 | 0.820228 | 7.663031e-53 | -8.615850e-47 |
| Msa0172530 | Msa0515830 | 0.803228 | 3.852396e-49 | -8.615850e-47 |
| Msa0172530 | Msa0522510 | 0.802030 | 6.805399e-49 | -8.615850e-47 |
| Msa0172530 | Msa0523400 | 0.814057 | 1.869829e-51 | -8.615850e-47 |
| Msa0172530 | Msa0528170 | 0.811467 | 6.901252e-51 | -8.615850e-47 |
| Msa0172530 | Msa0532910 | 0.836576 | 8.632836e-57 | -8.615850e-47 |
| Msa0172530 | Msa0538100 | 0.811701 | 6.137560e-51 | -8.615850e-47 |
| Msa0172530 | Msa0545910 | 0.811918 | 5.505801e-51 | -8.615850e-47 |
| Msa0172530 | Msa0553940 | 0.816306 | 5.920079e-52 | -8.615850e-47 |
| Msa0172530 | Msa0558220 | 0.808341 | 3.248407e-50 | -8.615850e-47 |
| Msa0172530 | Msa0565930 | 0.836451 | 9.284304e-57 | -8.615850e-47 |
| Msa0172530 | Msa0568810 | 0.819355 | 1.213250e-52 | -8.615850e-47 |
| Msa0172530 | Msa0571220 | 0.807940 | 3.954925e-50 | -8.615850e-47 |
| Msa0172530 | Msa0577140 | 0.813371 | 2.648135e-51 | -8.615850e-47 |
| Msa0172530 | Msa0583810 | 0.808474 | 3.042347e-50 | -8.615850e-47 |
| Msa0172530 | Msa0585770 | 0.809581 | 1.762700e-50 | -8.615850e-47 |
| Msa0172530 | Msa0587060 | 0.854601 | 1.104335e-61 | -8.615850e-47 |
| Msa0172530 | Msa0591370 | 0.802603 | 5.188592e-49 | -8.615850e-47 |
| Msa0172530 | Msa0606680 | 0.805411 | 1.352628e-49 | -8.615850e-47 |
| Msa0172530 | Msa0618260 | 0.806278 | 8.889372e-50 | -8.615850e-47 |
| Msa0172530 | Msa0621870 | 0.808675 | 2.756766e-50 | -8.615850e-47 |
| Msa0172530 | Msa0624260 | 0.803545 | 3.311823e-49 | -8.615850e-47 |
| Msa0172530 | Msa0624890 | 0.831627 | 1.499363e-55 | -8.615850e-47 |
| Msa0172530 | Msa0626890 | 0.823098 | 1.662581e-53 | -8.615850e-47 |
| Msa0172530 | Msa0641970 | 0.802226 | 6.201993e-49 | -8.615850e-47 |
| Msa0172530 | Msa0648410 | 0.839763 | 1.304372e-57 | -8.615850e-47 |
| Msa0172530 | Msa0657820 | 0.813231 | 2.841990e-51 | -8.615850e-47 |
| Msa0172530 | Msa0663580 | 0.802585 | 5.232214e-49 | -8.615850e-47 |
| Msa0172530 | Msa0665010 | 0.834858 | 2.350073e-56 | -8.615850e-47 |
| Msa0172530 | Msa0667710 | 0.836131 | 1.119704e-56 | -8.615850e-47 |
| Msa0172530 | Msa0669710 | 0.801107 | 1.052420e-48 | -8.615850e-47 |
| Msa0172530 | Msa0677590 | 0.831606 | 1.517943e-55 | -8.615850e-47 |
| Msa0172530 | Msa0681040 | 0.827659 | 1.384356e-54 | -8.615850e-47 |
| Msa0172530 | Msa0688760 | 0.809786 | 1.592976e-50 | -8.615850e-47 |
| Msa0172530 | Msa0690920 | 0.840211 | 9.970368e-58 | -8.615850e-47 |
| Msa0172530 | Msa0704750 | 0.827334 | 1.656449e-54 | -8.615850e-47 |
| Msa0172530 | Msa0706710 | 0.808802 | 2.589071e-50 | -8.615850e-47 |
| Msa0172530 | Msa0715050 | 0.809944 | 1.473194e-50 | -8.615850e-47 |
| Msa0172530 | Msa0720850 | 0.803702 | 3.072868e-49 | -8.615850e-47 |
| Msa0172530 | Msa0743630 | 0.839633 | 1.409973e-57 | -8.615850e-47 |
| Msa0172530 | Msa0747900 | 0.837526 | 4.935133e-57 | -8.615850e-47 |
| Msa0172530 | Msa0761930 | 0.806650 | 7.421897e-50 | -8.615850e-47 |
| Msa0172530 | Msa0804930 | 0.823581 | 1.282465e-53 | -8.615850e-47 |
| Msa0172530 | Msa0824750 | 0.817155 | 3.818195e-52 | -8.615850e-47 |
| Msa0172530 | Msa0846180 | 0.802777 | 4.775717e-49 | -8.615850e-47 |
| Msa0172530 | Msa0863780 | 0.830306 | 3.163215e-55 | -8.615850e-47 |
| Msa0172530 | Msa0868040 | 0.803858 | 2.852779e-49 | -8.615850e-47 |
| Msa0172530 | Msa0880060 | 0.826320 | 2.894091e-54 | -8.615850e-47 |
| Msa0172530 | Msa0880370 | 0.813348 | 2.678643e-51 | -8.615850e-47 |
| Msa0172530 | Msa0883880 | 0.827603 | 1.428222e-54 | -8.615850e-47 |
| Msa0172530 | Msa0911440 | 0.803889 | 2.810118e-49 | -8.615850e-47 |
| Msa0172530 | Msa0911490 | 0.802503 | 5.440882e-49 | -8.615850e-47 |
| Msa0172530 | Msa0932040 | 0.827908 | 1.206229e-54 | -8.615850e-47 |
| Msa0172530 | Msa0967260 | 0.832884 | 7.324987e-56 | -8.615850e-47 |
| Msa0172530 | Msa0967920 | 0.812749 | 3.624928e-51 | -8.615850e-47 |
| Msa0172530 | Msa0970160 | 0.816946 | 4.255195e-52 | -8.615850e-47 |
| Msa0172530 | Msa0975460 | 0.805452 | 1.325883e-49 | -8.615850e-47 |
| Msa0172530 | Msa0985570 | 0.801401 | 9.161445e-49 | -8.615850e-47 |
| Msa0172530 | Msa1014530 | 0.806233 | 9.087421e-50 | -8.615850e-47 |
| Msa0172530 | Msa1015020 | 0.811308 | 7.470943e-51 | -8.615850e-47 |
| Msa0172530 | Msa1022660 | 0.821161 | 4.678116e-53 | -8.615850e-47 |
| Msa0172530 | Msa1033460 | 0.815730 | 7.958237e-52 | -8.615850e-47 |
| Msa0172530 | Msa1038040 | 0.819283 | 1.259720e-52 | -8.615850e-47 |
| Msa0172530 | Msa1041620 | 0.853396 | 2.457313e-61 | -8.615850e-47 |
| Msa0172530 | Msa1042380 | 0.823252 | 1.530909e-53 | -8.615850e-47 |
| Msa0172530 | Msa1055490 | 0.802274 | 6.063840e-49 | -8.615850e-47 |
| Msa0172530 | Msa1066980 | 0.803281 | 3.757282e-49 | -8.615850e-47 |
| Msa0172530 | Msa1070930 | 0.803062 | 4.170489e-49 | -8.615850e-47 |
| Msa0172530 | Msa1072640 | 0.822478 | 2.318694e-53 | -8.615850e-47 |
| Msa0172530 | Msa1073140 | 0.836402 | 9.555295e-57 | -8.615850e-47 |
| Msa0172530 | Msa1081650 | 0.835819 | 1.344041e-56 | -8.615850e-47 |
| Msa0172530 | Msa1085370 | 0.836873 | 7.249157e-57 | -8.615850e-47 |
| Msa0172530 | Msa1103610 | 0.802343 | 5.867606e-49 | -8.615850e-47 |
| Msa0172530 | Msa1106830 | 0.810304 | 1.232045e-50 | -8.615850e-47 |
| Msa0172530 | Msa1125100 | 0.824736 | 6.867675e-54 | -8.615850e-47 |
| Msa0172530 | Msa1125150 | 0.825351 | 4.915391e-54 | -8.615850e-47 |
| Msa0172530 | Msa1127530 | 0.805829 | 1.105009e-49 | -8.615850e-47 |
| Msa0172530 | Msa1130070 | 0.814406 | 1.566251e-51 | -8.615850e-47 |
| Msa0172530 | Msa1144470 | 0.815661 | 8.244593e-52 | -8.615850e-47 |
| Msa0172530 | Msa1147190 | 0.810114 | 1.353874e-50 | -8.615850e-47 |
| Msa0172530 | Msa1147870 | 0.814350 | 1.611016e-51 | -8.615850e-47 |
| Msa0172530 | Msa1150250 | 0.804035 | 2.620484e-49 | -8.615850e-47 |
| Msa0172530 | Msa1160470 | 0.824544 | 7.619808e-54 | -8.615850e-47 |
| Msa0172530 | Msa1161520 | 0.800661 | 1.297944e-48 | -8.615850e-47 |
| Msa0172530 | Msa1166520 | 0.847650 | 1.010972e-59 | -8.615850e-47 |
| Msa0172530 | Msa1185040 | 0.826563 | 2.532504e-54 | -8.615850e-47 |
| Msa0172530 | Msa1186010 | 0.806027 | 1.004188e-49 | -8.615850e-47 |
| Msa0172530 | Msa1193680 | 0.804498 | 2.099321e-49 | -8.615850e-47 |
| Msa0172530 | Msa1197210 | 0.805594 | 1.238251e-49 | -8.615850e-47 |
| Msa0172530 | Msa1198280 | 0.806164 | 9.393810e-50 | -8.615850e-47 |
| Msa0172530 | Msa1199690 | 0.857361 | 1.720431e-62 | -8.615850e-47 |
| Msa0172530 | Msa1203840 | 0.826914 | 2.088573e-54 | -8.615850e-47 |
| Msa0172530 | Msa1203860 | 0.815962 | 7.063629e-52 | -8.615850e-47 |
| Msa0172530 | Msa1209390 | 0.808352 | 3.230543e-50 | -8.615850e-47 |
| Msa0172530 | Msa1209650 | 0.832007 | 1.208363e-55 | -8.615850e-47 |
| Msa0172530 | Msa1215790 | 0.801244 | 9.866613e-49 | -8.615850e-47 |
| Msa0172530 | Msa1223600 | 0.803817 | 2.908370e-49 | -8.615850e-47 |
| Msa0172530 | Msa1224310 | 0.803005 | 4.284030e-49 | -8.615850e-47 |
| Msa0172530 | Msa1229880 | 0.807014 | 6.216324e-50 | -8.615850e-47 |
| Msa0172530 | Msa1236090 | 0.813184 | 2.910018e-51 | -8.615850e-47 |
| Msa0172530 | Msa1249740 | 0.800580 | 1.348550e-48 | -8.615850e-47 |
| Msa0172530 | Msa1252220 | 0.812395 | 4.331704e-51 | -8.615850e-47 |
| Msa0172530 | Msa1260240 | 0.804089 | 2.554243e-49 | -8.615850e-47 |
| Msa0172530 | Msa1263600 | 0.801131 | 1.040672e-48 | -8.615850e-47 |
| Msa0172530 | Msa1263970 | 0.800440 | 1.439937e-48 | -8.615850e-47 |
| Msa0172530 | Msa1265990 | 0.802703 | 4.947000e-49 | -8.615850e-47 |
| Msa0172530 | Msa1267800 | 0.835331 | 1.785558e-56 | -8.615850e-47 |
| Msa0172530 | Msa1279240 | 0.855140 | 7.700802e-62 | -8.615850e-47 |
| Msa0172530 | Msa1298740 | 0.818316 | 2.089196e-52 | -8.615850e-47 |
| Msa0172530 | Msa1303130 | 0.817463 | 3.255857e-52 | -8.615850e-47 |
| Msa0172530 | Msa1310620 | 0.802496 | 5.457927e-49 | -8.615850e-47 |
| Msa0172530 | Msa1316090 | 0.802417 | 5.666933e-49 | -8.615850e-47 |
| Msa0172530 | Msa1319520 | 0.814451 | 1.530375e-51 | -8.615850e-47 |
| Msa0172530 | Msa1319710 | 0.816010 | 6.891190e-52 | -8.615850e-47 |
| Msa0172530 | Msa1330910 | 0.820204 | 7.760149e-53 | -8.615850e-47 |
| Msa0172530 | Msa1351370 | 0.807960 | 3.915996e-50 | -8.615850e-47 |
| Msa0172530 | Msa1356500 | 0.823289 | 1.500728e-53 | -8.615850e-47 |
| Msa0172530 | Msa1357760 | 0.830499 | 2.837303e-55 | -8.615850e-47 |
| Msa0172530 | Msa1361090 | 0.838679 | 2.492247e-57 | -8.615850e-47 |
| Msa0172530 | Msa1364850 | 0.807043 | 6.129078e-50 | -8.615850e-47 |
| Msa0172530 | Msa1370830 | 0.828192 | 1.030843e-54 | -8.615850e-47 |
| Msa0172530 | Msa1374610 | 0.813086 | 3.058601e-51 | -8.615850e-47 |
| Msa0172530 | Msa1384980 | 0.819376 | 1.200058e-52 | -8.615850e-47 |
| Msa0172530 | Msa1385940 | 0.804892 | 1.736457e-49 | -8.615850e-47 |
| Msa0172530 | Msa1391600 | 0.811761 | 5.954369e-51 | -8.615850e-47 |
| Msa0172530 | Msa1396310 | 0.801501 | 8.741565e-49 | -8.615850e-47 |
| Msa0172530 | Msa1397550 | 0.834459 | 2.961849e-56 | -8.615850e-47 |
| Msa0172530 | Msa1414280 | 0.805703 | 1.174424e-49 | -8.615850e-47 |
| Msa0172530 | Msa1420130 | 0.804139 | 2.493647e-49 | -8.615850e-47 |
| Msa0172530 | Msa1420630 | 0.835550 | 1.572378e-56 | -8.615850e-47 |
| Msa0172530 | Msa1425570 | 0.835246 | 1.876512e-56 | -8.615850e-47 |
| Msa0172530 | Msa1426870 | 0.802138 | 6.466802e-49 | -8.615850e-47 |
| Msa0172530 | Msa1427020 | 0.807751 | 4.337805e-50 | -8.615850e-47 |
| Msa0172530 | Msa1428990 | 0.816870 | 4.423948e-52 | -8.615850e-47 |
| Msa0172530 | Msa1432350 | 0.809174 | 2.156011e-50 | -8.615850e-47 |
| Msa0172530 | Msa1435690 | 0.806786 | 6.946363e-50 | -8.615850e-47 |
| Msa0172530 | Msa1449510 | 0.804777 | 1.835414e-49 | -8.615850e-47 |
| Msa0172530 | Msa1451780 | 0.826287 | 2.947244e-54 | -8.615850e-47 |
| Msa0172530 | Msa1458250 | 0.965188 | 2.787069e-124 | -8.615850e-47 |
| Msa0172530 | Msa1465380 | 0.803175 | 3.951101e-49 | -8.615850e-47 |
| Msa0172530 | Msa1465410 | 0.825804 | 3.837744e-54 | -8.615850e-47 |
| Msa0172530 | Msa1466170 | 0.816614 | 5.050468e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172530 | MtrunA17_Chr1g0190531 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 5.27e-92 | 261 |
| Msa0172530 | MtrunA17_Chr2g0332861 | 82.000 | 100 | 18 | 0 | 13 | 112 | 19 | 118 | 2.19e-56 | 172 |
| Msa0172530 | MtrunA17_Chr4g0003571 | 75.455 | 110 | 22 | 1 | 8 | 112 | 4 | 113 | 1.15e-54 | 167 |
| Msa0172530 | MtrunA17_Chr5g0395021 | 57.143 | 91 | 39 | 0 | 20 | 110 | 41 | 131 | 1.37e-29 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172530 | AT3G04620.1 | 89.109 | 101 | 11 | 0 | 14 | 114 | 33 | 133 | 3.74e-63 | 190 |
| Msa0172530 | AT2G34160.1 | 73.451 | 113 | 30 | 0 | 12 | 124 | 14 | 126 | 7.80e-56 | 171 |
| Msa0172530 | AT1G29250.1 | 77.228 | 101 | 23 | 0 | 12 | 112 | 14 | 114 | 4.53e-53 | 163 |
Find 48 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATTCTGTTCTTCTTA+TGG | 0.143902 | 1_4:-57610524 | None:intergenic |
| AAACATCATATATTATAATA+TGG | 0.229375 | 1_4:+57611851 | Msa0172530:three_prime_UTR |
| ATTCATGGACGTAAGTAAAT+AGG | 0.243793 | 1_4:+57611920 | Msa0172530:three_prime_UTR |
| CTGAATTCTGTTCTTCTTAT+GGG | 0.253699 | 1_4:-57610523 | None:intergenic |
| TCAGTAGCTGCTTCTGATTC+AGG | 0.262383 | 1_4:-57611814 | None:intergenic |
| TCATTTGCAGTTTCAGTTAC+AGG | 0.276939 | 1_4:-57610498 | None:intergenic |
| GTCAGTGCCTTGTTTATATA+AGG | 0.295046 | 1_4:-57610412 | None:intergenic |
| GTAACGGTAAAGTAGTTTAA+TGG | 0.315122 | 1_4:-57610435 | None:intergenic |
| CCATAAGAAGAACAGAATTC+AGG | 0.338440 | 1_4:+57610524 | Msa0172530:CDS |
| TTCATGGACGTAAGTAAATA+GGG | 0.345558 | 1_4:+57611921 | Msa0172530:three_prime_UTR |
| GTAAAAGAAAAGTGGTTTCT+TGG | 0.349846 | 1_4:-57610556 | None:intergenic |
| AATACAATCTAAAGTTATAA+TGG | 0.350985 | 1_4:-57612006 | None:intergenic |
| GAGGTTGAGCTTTCTGCTCT+TGG | 0.357617 | 1_4:+57610975 | Msa0172530:CDS |
| GAGCTTTCTGCTCTTGGAAT+GGG | 0.372225 | 1_4:+57610981 | Msa0172530:CDS |
| GAAAAGTGGTTTCTTGGTGT+TGG | 0.373099 | 1_4:-57610550 | None:intergenic |
| TTCCACCTCATAATTGAATC+AGG | 0.388702 | 1_4:-57612115 | None:intergenic |
| TAACGGTAAAGTAGTTTAAT+GGG | 0.430336 | 1_4:-57610434 | None:intergenic |
| AGTAAATAGGGGAGTAGAAA+AGG | 0.430445 | 1_4:+57611933 | Msa0172530:three_prime_UTR |
| TGAGCTTTCTGCTCTTGGAA+TGG | 0.445801 | 1_4:+57610980 | Msa0172530:CDS |
| TTTGTAGATTGAAATTGTGC+TGG | 0.464511 | 1_4:+57611741 | Msa0172530:intron |
| AACATCATATATTATAATAT+GGG | 0.471119 | 1_4:+57611852 | Msa0172530:three_prime_UTR |
| TCCATTGTTCTTCAAAATCT+CGG | 0.472867 | 1_4:-57611449 | None:intergenic |
| AATGAGGGGATCAAAGTTGT+AGG | 0.482695 | 1_4:+57611973 | Msa0172530:three_prime_UTR |
| TTCAGTTACAGGTGCAGCTA+TGG | 0.492084 | 1_4:-57610487 | None:intergenic |
| TCAGGTGTGGTGGTGTCAGC+AGG | 0.492551 | 1_4:-57611796 | None:intergenic |
| CAAAGGTCGGCTTGTGCAGA+AGG | 0.493622 | 1_4:+57611614 | Msa0172530:CDS |
| ACCTCATAATTGAATCAGGT+TGG | 0.502585 | 1_4:-57612111 | None:intergenic |
| GTAAATAGGGGAGTAGAAAA+GGG | 0.509721 | 1_4:+57611934 | Msa0172530:three_prime_UTR |
| CCTCATAATTGAATCAGGTT+GGG | 0.517241 | 1_4:-57612110 | None:intergenic |
| GACATCTACAGTTGGCATGA+AGG | 0.541089 | 1_4:+57611584 | Msa0172530:CDS |
| AGGGGAGTAGAAAAGGGTCG+TGG | 0.541220 | 1_4:+57611940 | Msa0172530:three_prime_UTR |
| CGTGGAGTTCAATGCAATGA+GGG | 0.553178 | 1_4:+57611958 | Msa0172530:three_prime_UTR |
| TGAGAAGTTTGACAATATGA+TGG | 0.556772 | 1_4:+57611771 | Msa0172530:CDS |
| TGCTTCTGATTCAGGTGTGG+TGG | 0.564894 | 1_4:-57611806 | None:intergenic |
| GAAGTATTGACATCTACAGT+TGG | 0.573871 | 1_4:+57611576 | Msa0172530:intron |
| TTGTAGATTGAAATTGTGCT+GGG | 0.576481 | 1_4:+57611742 | Msa0172530:intron |
| AGATTGACGTAAAAGAAAAG+TGG | 0.580806 | 1_4:-57610564 | None:intergenic |
| GTAATCCTCTGTAACTGTAA+CGG | 0.592251 | 1_4:-57610451 | None:intergenic |
| AGCTGCTTCTGATTCAGGTG+TGG | 0.603045 | 1_4:-57611809 | None:intergenic |
| CTTTACCGTTACAGTTACAG+AGG | 0.610243 | 1_4:+57610446 | Msa0172530:five_prime_UTR |
| TCGTGGAGTTCAATGCAATG+AGG | 0.638219 | 1_4:+57611957 | Msa0172530:three_prime_UTR |
| TGAAGGATGAGAACAAAGGT+CGG | 0.640401 | 1_4:+57611601 | Msa0172530:CDS |
| TCGGCTTGTGCAGAAGGCAA+AGG | 0.641693 | 1_4:+57611620 | Msa0172530:CDS |
| TCATGGACGTAAGTAAATAG+GGG | 0.646244 | 1_4:+57611922 | Msa0172530:three_prime_UTR |
| ACTCATGCCTTATATAAACA+AGG | 0.680741 | 1_4:+57610405 | None:intergenic |
| GTGGAGTTCAATGCAATGAG+GGG | 0.682802 | 1_4:+57611959 | Msa0172530:three_prime_UTR |
| ATACATTCAGCAGCACAATG+AGG | 0.717661 | 1_4:+57610956 | Msa0172530:CDS |
| GGCATGAAGGATGAGAACAA+AGG | 0.737049 | 1_4:+57611597 | Msa0172530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATCATATATTATAATA+TGG | + | chr1_4:57611851-57611870 | Msa0172530:three_prime_UTR | 10.0% |
| !! | AACATCATATATTATAATAT+GGG | + | chr1_4:57611852-57611871 | Msa0172530:three_prime_UTR | 10.0% |
| !! | AAACATCATATATTATAATA+TGG | + | chr1_4:57611851-57611870 | Msa0172530:three_prime_UTR | 10.0% |
| !! | AACATCATATATTATAATAT+GGG | + | chr1_4:57611852-57611871 | Msa0172530:three_prime_UTR | 10.0% |
| !! | TAAAAACAATGTAATGTATA+AGG | + | chr1_4:57611240-57611259 | Msa0172530:intron | 15.0% |
| !!! | AATACAATCTAAAGTTATAA+TGG | - | chr1_4:57612009-57612028 | None:intergenic | 15.0% |
| !! | TAAAAACAATGTAATGTATA+AGG | + | chr1_4:57611240-57611259 | Msa0172530:intron | 15.0% |
| !!! | AATACAATCTAAAGTTATAA+TGG | - | chr1_4:57612009-57612028 | None:intergenic | 15.0% |
| !! | AATGATCATTAGATTAAGAT+CGG | + | chr1_4:57610651-57610670 | Msa0172530:intron | 20.0% |
| !! | ATTTACTTACATTACTTTGA+TGG | + | chr1_4:57610839-57610858 | Msa0172530:intron | 20.0% |
| !! | GCTATAGAAAAGAAAAAAAA+TGG | + | chr1_4:57610885-57610904 | Msa0172530:intron | 20.0% |
| !! | CAAATTAAAGACAAAAAGAA+GGG | - | chr1_4:57611033-57611052 | None:intergenic | 20.0% |
| !! | AGAAGAATCCAATTAATAAT+CGG | - | chr1_4:57611061-57611080 | None:intergenic | 20.0% |
| !!! | ATTTTAATGTTAGTTGTTTC+TGG | + | chr1_4:57611138-57611157 | Msa0172530:intron | 20.0% |
| !! | AAAAAGAAAAACAGAAAATG+AGG | + | chr1_4:57611266-57611285 | Msa0172530:intron | 20.0% |
| !! | CTAATCAATTAATGAATGTT+TGG | + | chr1_4:57611545-57611564 | Msa0172530:intron | 20.0% |
| !! | TGAAAGAAAAAAGACATAAT+TGG | - | chr1_4:57612085-57612104 | None:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTTCTTTCA+AGG | + | chr1_4:57612085-57612104 | Msa0172530:three_prime_UTR | 20.0% |
| !! | AATGATCATTAGATTAAGAT+CGG | + | chr1_4:57610651-57610670 | Msa0172530:intron | 20.0% |
| !! | ATTTACTTACATTACTTTGA+TGG | + | chr1_4:57610839-57610858 | Msa0172530:intron | 20.0% |
| !! | GCTATAGAAAAGAAAAAAAA+TGG | + | chr1_4:57610885-57610904 | Msa0172530:intron | 20.0% |
| !! | CAAATTAAAGACAAAAAGAA+GGG | - | chr1_4:57611033-57611052 | None:intergenic | 20.0% |
| !! | AGAAGAATCCAATTAATAAT+CGG | - | chr1_4:57611061-57611080 | None:intergenic | 20.0% |
| !!! | ATTTTAATGTTAGTTGTTTC+TGG | + | chr1_4:57611138-57611157 | Msa0172530:intron | 20.0% |
| !! | AAAAAGAAAAACAGAAAATG+AGG | + | chr1_4:57611266-57611285 | Msa0172530:intron | 20.0% |
| !! | CTAATCAATTAATGAATGTT+TGG | + | chr1_4:57611545-57611564 | Msa0172530:intron | 20.0% |
| !! | TGAAAGAAAAAAGACATAAT+TGG | - | chr1_4:57612085-57612104 | None:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTTCTTTCA+AGG | + | chr1_4:57612085-57612104 | Msa0172530:three_prime_UTR | 20.0% |
| ! | TAACGGTAAAGTAGTTTAAT+GGG | - | chr1_4:57610437-57610456 | None:intergenic | 25.0% |
| !! | ATGTAATGTCACTTGATAAT+CGG | + | chr1_4:57610597-57610616 | Msa0172530:intron | 25.0% |
| !! | GACTTTCTTAATTTTAAGCA+CGG | + | chr1_4:57610673-57610692 | Msa0172530:intron | 25.0% |
| ! | TTCAAATTGTGATCAACTAA+TGG | + | chr1_4:57610863-57610882 | Msa0172530:intron | 25.0% |
| ! | AGAAAAGAAAAAAAATGGCT+AGG | + | chr1_4:57610890-57610909 | Msa0172530:intron | 25.0% |
| !! | ACAAAAAGAAGGGAAATTTT+AGG | - | chr1_4:57611023-57611042 | None:intergenic | 25.0% |
| ! | GCAAATTAAAGACAAAAAGA+AGG | - | chr1_4:57611034-57611053 | None:intergenic | 25.0% |
| !!! | TTACATTGACTTAACTATCA+AGG | + | chr1_4:57611169-57611188 | Msa0172530:intron | 25.0% |
| !!! | TCAAGGCATTATTTTTACTA+TGG | + | chr1_4:57611186-57611205 | Msa0172530:intron | 25.0% |
| !!! | TATTTTTACTATGGTGTGTA+AGG | + | chr1_4:57611195-57611214 | Msa0172530:intron | 25.0% |
| !! | TACTTTTGTTCAATTGATAG+AGG | - | chr1_4:57611317-57611336 | None:intergenic | 25.0% |
| ! | TAGAGTAAGAATATGAAACT+AGG | - | chr1_4:57611356-57611375 | None:intergenic | 25.0% |
| ! | ACAAAAATGTTGACATGAAT+TGG | + | chr1_4:57611397-57611416 | Msa0172530:intron | 25.0% |
| ! | TATAACTCTCATTCATATGA+TGG | + | chr1_4:57611512-57611531 | Msa0172530:intron | 25.0% |
| !! | TGTTGTAATTTTTGCATTCA+TGG | + | chr1_4:57611905-57611924 | Msa0172530:three_prime_UTR | 25.0% |
| ! | TAACGGTAAAGTAGTTTAAT+GGG | - | chr1_4:57610437-57610456 | None:intergenic | 25.0% |
| !! | ATGTAATGTCACTTGATAAT+CGG | + | chr1_4:57610597-57610616 | Msa0172530:intron | 25.0% |
| !! | GACTTTCTTAATTTTAAGCA+CGG | + | chr1_4:57610673-57610692 | Msa0172530:intron | 25.0% |
| ! | TTCAAATTGTGATCAACTAA+TGG | + | chr1_4:57610863-57610882 | Msa0172530:intron | 25.0% |
| ! | AGAAAAGAAAAAAAATGGCT+AGG | + | chr1_4:57610890-57610909 | Msa0172530:intron | 25.0% |
| !! | ACAAAAAGAAGGGAAATTTT+AGG | - | chr1_4:57611023-57611042 | None:intergenic | 25.0% |
| ! | GCAAATTAAAGACAAAAAGA+AGG | - | chr1_4:57611034-57611053 | None:intergenic | 25.0% |
| !!! | TTACATTGACTTAACTATCA+AGG | + | chr1_4:57611169-57611188 | Msa0172530:intron | 25.0% |
| !!! | TCAAGGCATTATTTTTACTA+TGG | + | chr1_4:57611186-57611205 | Msa0172530:intron | 25.0% |
| !!! | TATTTTTACTATGGTGTGTA+AGG | + | chr1_4:57611195-57611214 | Msa0172530:intron | 25.0% |
| !! | TACTTTTGTTCAATTGATAG+AGG | - | chr1_4:57611317-57611336 | None:intergenic | 25.0% |
| ! | TAGAGTAAGAATATGAAACT+AGG | - | chr1_4:57611356-57611375 | None:intergenic | 25.0% |
| ! | ACAAAAATGTTGACATGAAT+TGG | + | chr1_4:57611397-57611416 | Msa0172530:intron | 25.0% |
| ! | TATAACTCTCATTCATATGA+TGG | + | chr1_4:57611512-57611531 | Msa0172530:intron | 25.0% |
| !! | TGTTGTAATTTTTGCATTCA+TGG | + | chr1_4:57611905-57611924 | Msa0172530:three_prime_UTR | 25.0% |
| GTAACGGTAAAGTAGTTTAA+TGG | - | chr1_4:57610438-57610457 | None:intergenic | 30.0% | |
| CTGAATTCTGTTCTTCTTAT+GGG | - | chr1_4:57610526-57610545 | None:intergenic | 30.0% | |
| GTAAAAGAAAAGTGGTTTCT+TGG | - | chr1_4:57610559-57610578 | None:intergenic | 30.0% | |
| AGATTGACGTAAAAGAAAAG+TGG | - | chr1_4:57610567-57610586 | None:intergenic | 30.0% | |
| ! | TGTAATGTCACTTGATAATC+GGG | + | chr1_4:57610598-57610617 | Msa0172530:intron | 30.0% |
| AATGATCATTGATGTAGTGA+CGG | - | chr1_4:57610641-57610660 | None:intergenic | 30.0% | |
| ACTGTTTAATCTGAATTCAG+CGG | + | chr1_4:57610740-57610759 | Msa0172530:intron | 30.0% | |
| TTGCACAACCGATTATTAAT+TGG | + | chr1_4:57611050-57611069 | Msa0172530:intron | 30.0% | |
| AATTGATAGAGGATATCTGT+TGG | - | chr1_4:57611306-57611325 | None:intergenic | 30.0% | |
| TCCATTGTTCTTCAAAATCT+CGG | - | chr1_4:57611452-57611471 | None:intergenic | 30.0% | |
| ! | TGAATTCTCTTCATTTTCGT+CGG | - | chr1_4:57611653-57611672 | None:intergenic | 30.0% |
| CAAAATACCAAGAAAAGTCT+AGG | - | chr1_4:57611725-57611744 | None:intergenic | 30.0% | |
| TTTGTAGATTGAAATTGTGC+TGG | + | chr1_4:57611741-57611760 | Msa0172530:intron | 30.0% | |
| TTGTAGATTGAAATTGTGCT+GGG | + | chr1_4:57611742-57611761 | Msa0172530:intron | 30.0% | |
| TGAGAAGTTTGACAATATGA+TGG | + | chr1_4:57611771-57611790 | Msa0172530:CDS | 30.0% | |
| ATTCATGGACGTAAGTAAAT+AGG | + | chr1_4:57611920-57611939 | Msa0172530:three_prime_UTR | 30.0% | |
| TTCATGGACGTAAGTAAATA+GGG | + | chr1_4:57611921-57611940 | Msa0172530:three_prime_UTR | 30.0% | |
| GTAACGGTAAAGTAGTTTAA+TGG | - | chr1_4:57610438-57610457 | None:intergenic | 30.0% | |
| CTGAATTCTGTTCTTCTTAT+GGG | - | chr1_4:57610526-57610545 | None:intergenic | 30.0% | |
| GTAAAAGAAAAGTGGTTTCT+TGG | - | chr1_4:57610559-57610578 | None:intergenic | 30.0% | |
| AGATTGACGTAAAAGAAAAG+TGG | - | chr1_4:57610567-57610586 | None:intergenic | 30.0% | |
| ! | TGTAATGTCACTTGATAATC+GGG | + | chr1_4:57610598-57610617 | Msa0172530:intron | 30.0% |
| AATGATCATTGATGTAGTGA+CGG | - | chr1_4:57610641-57610660 | None:intergenic | 30.0% | |
| ACTGTTTAATCTGAATTCAG+CGG | + | chr1_4:57610740-57610759 | Msa0172530:intron | 30.0% | |
| TTGCACAACCGATTATTAAT+TGG | + | chr1_4:57611050-57611069 | Msa0172530:intron | 30.0% | |
| AATTGATAGAGGATATCTGT+TGG | - | chr1_4:57611306-57611325 | None:intergenic | 30.0% | |
| TCCATTGTTCTTCAAAATCT+CGG | - | chr1_4:57611452-57611471 | None:intergenic | 30.0% | |
| ! | TGAATTCTCTTCATTTTCGT+CGG | - | chr1_4:57611653-57611672 | None:intergenic | 30.0% |
| CAAAATACCAAGAAAAGTCT+AGG | - | chr1_4:57611725-57611744 | None:intergenic | 30.0% | |
| TTTGTAGATTGAAATTGTGC+TGG | + | chr1_4:57611741-57611760 | Msa0172530:intron | 30.0% | |
| TTGTAGATTGAAATTGTGCT+GGG | + | chr1_4:57611742-57611761 | Msa0172530:intron | 30.0% | |
| TGAGAAGTTTGACAATATGA+TGG | + | chr1_4:57611771-57611790 | Msa0172530:CDS | 30.0% | |
| ATTCATGGACGTAAGTAAAT+AGG | + | chr1_4:57611920-57611939 | Msa0172530:three_prime_UTR | 30.0% | |
| TTCATGGACGTAAGTAAATA+GGG | + | chr1_4:57611921-57611940 | Msa0172530:three_prime_UTR | 30.0% | |
| !! | GTCAGTGCCTTGTTTATATA+AGG | - | chr1_4:57610415-57610434 | None:intergenic | 35.0% |
| GTAATCCTCTGTAACTGTAA+CGG | - | chr1_4:57610454-57610473 | None:intergenic | 35.0% | |
| TCATTTGCAGTTTCAGTTAC+AGG | - | chr1_4:57610501-57610520 | None:intergenic | 35.0% | |
| CCTGAATTCTGTTCTTCTTA+TGG | - | chr1_4:57610527-57610546 | None:intergenic | 35.0% | |
| CCATAAGAAGAACAGAATTC+AGG | + | chr1_4:57610524-57610543 | Msa0172530:CDS | 35.0% | |
| CAAGTGACATTACATTACCT+TGG | - | chr1_4:57610592-57610611 | None:intergenic | 35.0% | |
| TGAATGTATCTCTGCATCAA+AGG | - | chr1_4:57610945-57610964 | None:intergenic | 35.0% | |
| TATGAAACTAGGAACAGATG+AGG | - | chr1_4:57611345-57611364 | None:intergenic | 35.0% | |
| !! | GAAGTATTGACATCTACAGT+TGG | + | chr1_4:57611576-57611595 | Msa0172530:intron | 35.0% |
| ! | TCTTAAGCCTAGACTTTTCT+TGG | + | chr1_4:57611715-57611734 | Msa0172530:intron | 35.0% |
| TCATGGACGTAAGTAAATAG+GGG | + | chr1_4:57611922-57611941 | Msa0172530:three_prime_UTR | 35.0% | |
| AGTAAATAGGGGAGTAGAAA+AGG | + | chr1_4:57611933-57611952 | Msa0172530:three_prime_UTR | 35.0% | |
| GTAAATAGGGGAGTAGAAAA+GGG | + | chr1_4:57611934-57611953 | Msa0172530:three_prime_UTR | 35.0% | |
| !! | GTCAGTGCCTTGTTTATATA+AGG | - | chr1_4:57610415-57610434 | None:intergenic | 35.0% |
| GTAATCCTCTGTAACTGTAA+CGG | - | chr1_4:57610454-57610473 | None:intergenic | 35.0% | |
| TCATTTGCAGTTTCAGTTAC+AGG | - | chr1_4:57610501-57610520 | None:intergenic | 35.0% | |
| CCTGAATTCTGTTCTTCTTA+TGG | - | chr1_4:57610527-57610546 | None:intergenic | 35.0% | |
| CCATAAGAAGAACAGAATTC+AGG | + | chr1_4:57610524-57610543 | Msa0172530:CDS | 35.0% | |
| CAAGTGACATTACATTACCT+TGG | - | chr1_4:57610592-57610611 | None:intergenic | 35.0% | |
| TGAATGTATCTCTGCATCAA+AGG | - | chr1_4:57610945-57610964 | None:intergenic | 35.0% | |
| TATGAAACTAGGAACAGATG+AGG | - | chr1_4:57611345-57611364 | None:intergenic | 35.0% | |
| !! | GAAGTATTGACATCTACAGT+TGG | + | chr1_4:57611576-57611595 | Msa0172530:intron | 35.0% |
| ! | TCTTAAGCCTAGACTTTTCT+TGG | + | chr1_4:57611715-57611734 | Msa0172530:intron | 35.0% |
| TCATGGACGTAAGTAAATAG+GGG | + | chr1_4:57611922-57611941 | Msa0172530:three_prime_UTR | 35.0% | |
| AGTAAATAGGGGAGTAGAAA+AGG | + | chr1_4:57611933-57611952 | Msa0172530:three_prime_UTR | 35.0% | |
| GTAAATAGGGGAGTAGAAAA+GGG | + | chr1_4:57611934-57611953 | Msa0172530:three_prime_UTR | 35.0% | |
| CTTTACCGTTACAGTTACAG+AGG | + | chr1_4:57610446-57610465 | Msa0172530:five_prime_UTR | 40.0% | |
| ! | GAAAAGTGGTTTCTTGGTGT+TGG | - | chr1_4:57610553-57610572 | None:intergenic | 40.0% |
| ! | CTTGATAATCGGGATACCTT+TGG | + | chr1_4:57610608-57610627 | Msa0172530:intron | 40.0% |
| TAGTGACGGTATGAATCCAA+AGG | - | chr1_4:57610627-57610646 | None:intergenic | 40.0% | |
| CATTCATGTAGTCGATGCAT+TGG | - | chr1_4:57610769-57610788 | None:intergenic | 40.0% | |
| ATACATTCAGCAGCACAATG+AGG | + | chr1_4:57610956-57610975 | Msa0172530:CDS | 40.0% | |
| !! | GCCGAGATTTTGAAGAACAA+TGG | + | chr1_4:57611448-57611467 | Msa0172530:CDS | 40.0% |
| ACTTGCAACTGAGAAGAGTA+AGG | + | chr1_4:57611471-57611490 | Msa0172530:intron | 40.0% | |
| TGAAGGATGAGAACAAAGGT+CGG | + | chr1_4:57611601-57611620 | Msa0172530:CDS | 40.0% | |
| AATGAGGGGATCAAAGTTGT+AGG | + | chr1_4:57611973-57611992 | Msa0172530:three_prime_UTR | 40.0% | |
| CTTTACCGTTACAGTTACAG+AGG | + | chr1_4:57610446-57610465 | Msa0172530:five_prime_UTR | 40.0% | |
| ! | GAAAAGTGGTTTCTTGGTGT+TGG | - | chr1_4:57610553-57610572 | None:intergenic | 40.0% |
| ! | CTTGATAATCGGGATACCTT+TGG | + | chr1_4:57610608-57610627 | Msa0172530:intron | 40.0% |
| TAGTGACGGTATGAATCCAA+AGG | - | chr1_4:57610627-57610646 | None:intergenic | 40.0% | |
| CATTCATGTAGTCGATGCAT+TGG | - | chr1_4:57610769-57610788 | None:intergenic | 40.0% | |
| ATACATTCAGCAGCACAATG+AGG | + | chr1_4:57610956-57610975 | Msa0172530:CDS | 40.0% | |
| !! | GCCGAGATTTTGAAGAACAA+TGG | + | chr1_4:57611448-57611467 | Msa0172530:CDS | 40.0% |
| ACTTGCAACTGAGAAGAGTA+AGG | + | chr1_4:57611471-57611490 | Msa0172530:intron | 40.0% | |
| TGAAGGATGAGAACAAAGGT+CGG | + | chr1_4:57611601-57611620 | Msa0172530:CDS | 40.0% | |
| AATGAGGGGATCAAAGTTGT+AGG | + | chr1_4:57611973-57611992 | Msa0172530:three_prime_UTR | 40.0% | |
| TTCAGTTACAGGTGCAGCTA+TGG | - | chr1_4:57610490-57610509 | None:intergenic | 45.0% | |
| ! | CTTTTACGTCAATCTCGCCA+AGG | + | chr1_4:57610572-57610591 | Msa0172530:CDS | 45.0% |
| TGAGCTTTCTGCTCTTGGAA+TGG | + | chr1_4:57610980-57610999 | Msa0172530:CDS | 45.0% | |
| GAGCTTTCTGCTCTTGGAAT+GGG | + | chr1_4:57610981-57611000 | Msa0172530:CDS | 45.0% | |
| GACATCTACAGTTGGCATGA+AGG | + | chr1_4:57611584-57611603 | Msa0172530:CDS | 45.0% | |
| GGCATGAAGGATGAGAACAA+AGG | + | chr1_4:57611597-57611616 | Msa0172530:CDS | 45.0% | |
| TCAGTAGCTGCTTCTGATTC+AGG | - | chr1_4:57611817-57611836 | None:intergenic | 45.0% | |
| TCGTGGAGTTCAATGCAATG+AGG | + | chr1_4:57611957-57611976 | Msa0172530:three_prime_UTR | 45.0% | |
| CGTGGAGTTCAATGCAATGA+GGG | + | chr1_4:57611958-57611977 | Msa0172530:three_prime_UTR | 45.0% | |
| GTGGAGTTCAATGCAATGAG+GGG | + | chr1_4:57611959-57611978 | Msa0172530:three_prime_UTR | 45.0% | |
| TTCAGTTACAGGTGCAGCTA+TGG | - | chr1_4:57610490-57610509 | None:intergenic | 45.0% | |
| ! | CTTTTACGTCAATCTCGCCA+AGG | + | chr1_4:57610572-57610591 | Msa0172530:CDS | 45.0% |
| TGAGCTTTCTGCTCTTGGAA+TGG | + | chr1_4:57610980-57610999 | Msa0172530:CDS | 45.0% | |
| GAGCTTTCTGCTCTTGGAAT+GGG | + | chr1_4:57610981-57611000 | Msa0172530:CDS | 45.0% | |
| GACATCTACAGTTGGCATGA+AGG | + | chr1_4:57611584-57611603 | Msa0172530:CDS | 45.0% | |
| GGCATGAAGGATGAGAACAA+AGG | + | chr1_4:57611597-57611616 | Msa0172530:CDS | 45.0% | |
| TCAGTAGCTGCTTCTGATTC+AGG | - | chr1_4:57611817-57611836 | None:intergenic | 45.0% | |
| TCGTGGAGTTCAATGCAATG+AGG | + | chr1_4:57611957-57611976 | Msa0172530:three_prime_UTR | 45.0% | |
| CGTGGAGTTCAATGCAATGA+GGG | + | chr1_4:57611958-57611977 | Msa0172530:three_prime_UTR | 45.0% | |
| GTGGAGTTCAATGCAATGAG+GGG | + | chr1_4:57611959-57611978 | Msa0172530:three_prime_UTR | 45.0% | |
| GAGGTTGAGCTTTCTGCTCT+TGG | + | chr1_4:57610975-57610994 | Msa0172530:CDS | 50.0% | |
| TGCTTCTGATTCAGGTGTGG+TGG | - | chr1_4:57611809-57611828 | None:intergenic | 50.0% | |
| AGCTGCTTCTGATTCAGGTG+TGG | - | chr1_4:57611812-57611831 | None:intergenic | 50.0% | |
| GAGGTTGAGCTTTCTGCTCT+TGG | + | chr1_4:57610975-57610994 | Msa0172530:CDS | 50.0% | |
| TGCTTCTGATTCAGGTGTGG+TGG | - | chr1_4:57611809-57611828 | None:intergenic | 50.0% | |
| AGCTGCTTCTGATTCAGGTG+TGG | - | chr1_4:57611812-57611831 | None:intergenic | 50.0% | |
| !! | CAAAGGTCGGCTTGTGCAGA+AGG | + | chr1_4:57611614-57611633 | Msa0172530:CDS | 55.0% |
| ! | TCGGCTTGTGCAGAAGGCAA+AGG | + | chr1_4:57611620-57611639 | Msa0172530:CDS | 55.0% |
| AGGGGAGTAGAAAAGGGTCG+TGG | + | chr1_4:57611940-57611959 | Msa0172530:three_prime_UTR | 55.0% | |
| !! | CAAAGGTCGGCTTGTGCAGA+AGG | + | chr1_4:57611614-57611633 | Msa0172530:CDS | 55.0% |
| ! | TCGGCTTGTGCAGAAGGCAA+AGG | + | chr1_4:57611620-57611639 | Msa0172530:CDS | 55.0% |
| AGGGGAGTAGAAAAGGGTCG+TGG | + | chr1_4:57611940-57611959 | Msa0172530:three_prime_UTR | 55.0% | |
| ! | TCAGGTGTGGTGGTGTCAGC+AGG | - | chr1_4:57611799-57611818 | None:intergenic | 60.0% |
| ! | TCAGGTGTGGTGGTGTCAGC+AGG | - | chr1_4:57611799-57611818 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 57610406 | 57612123 | 57610406 | ID=Msa0172530;Name=Msa0172530 |
| chr1_4 | mRNA | 57610406 | 57612123 | 57610406 | ID=Msa0172530-mRNA-1;Parent=Msa0172530;Name=Msa0172530-mRNA-1;_AED=0.22;_eAED=0.22;_QI=74|1|1|1|1|1|5|274|130 |
| chr1_4 | exon | 57610406 | 57610593 | 57610406 | ID=Msa0172530-mRNA-1:exon:17634;Parent=Msa0172530-mRNA-1 |
| chr1_4 | exon | 57610954 | 57611002 | 57610954 | ID=Msa0172530-mRNA-1:exon:17635;Parent=Msa0172530-mRNA-1 |
| chr1_4 | exon | 57611425 | 57611487 | 57611425 | ID=Msa0172530-mRNA-1:exon:17636;Parent=Msa0172530-mRNA-1 |
| chr1_4 | exon | 57611577 | 57611641 | 57611577 | ID=Msa0172530-mRNA-1:exon:17637;Parent=Msa0172530-mRNA-1 |
| chr1_4 | exon | 57611748 | 57612123 | 57611748 | ID=Msa0172530-mRNA-1:exon:17638;Parent=Msa0172530-mRNA-1 |
| chr1_4 | five_prime_UTR | 57610406 | 57610479 | 57610406 | ID=Msa0172530-mRNA-1:five_prime_utr;Parent=Msa0172530-mRNA-1 |
| chr1_4 | CDS | 57610480 | 57610593 | 57610480 | ID=Msa0172530-mRNA-1:cds;Parent=Msa0172530-mRNA-1 |
| chr1_4 | CDS | 57610954 | 57611002 | 57610954 | ID=Msa0172530-mRNA-1:cds;Parent=Msa0172530-mRNA-1 |
| chr1_4 | CDS | 57611425 | 57611487 | 57611425 | ID=Msa0172530-mRNA-1:cds;Parent=Msa0172530-mRNA-1 |
| chr1_4 | CDS | 57611577 | 57611641 | 57611577 | ID=Msa0172530-mRNA-1:cds;Parent=Msa0172530-mRNA-1 |
| chr1_4 | CDS | 57611748 | 57611849 | 57611748 | ID=Msa0172530-mRNA-1:cds;Parent=Msa0172530-mRNA-1 |
| chr1_4 | three_prime_UTR | 57611850 | 57612123 | 57611850 | ID=Msa0172530-mRNA-1:three_prime_utr;Parent=Msa0172530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
