Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684130 | XP_013456124.1 | 77.850 | 307 | 14 | 2 | 1 | 253 | 1 | 307 | 1.11e-162 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684130 | A0A072UWA8 | 77.850 | 307 | 14 | 2 | 1 | 253 | 1 | 307 | 5.29e-163 | 462 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011450 | Msa0684130 | -0.815546 | 8.745252e-52 | -8.615850e-47 |
| Msa0027020 | Msa0684130 | -0.818705 | 1.705053e-52 | -8.615850e-47 |
| Msa0042520 | Msa0684130 | -0.803786 | 2.951670e-49 | -8.615850e-47 |
| Msa0046020 | Msa0684130 | -0.812465 | 4.182728e-51 | -8.615850e-47 |
| Msa0070120 | Msa0684130 | 0.813931 | 1.993700e-51 | -8.615850e-47 |
| Msa0078700 | Msa0684130 | 0.808215 | 3.455085e-50 | -8.615850e-47 |
| Msa0090870 | Msa0684130 | 0.821837 | 3.264515e-53 | -8.615850e-47 |
| Msa0095940 | Msa0684130 | 0.855777 | 5.024484e-62 | -8.615850e-47 |
| Msa0098380 | Msa0684130 | 0.818590 | 1.810423e-52 | -8.615850e-47 |
| Msa0107830 | Msa0684130 | 0.801213 | 1.001204e-48 | -8.615850e-47 |
| Msa0117650 | Msa0684130 | 0.811017 | 8.639419e-51 | -8.615850e-47 |
| Msa0603300 | Msa0684130 | 0.902775 | 6.864836e-79 | -8.615850e-47 |
| Msa0603310 | Msa0684130 | 0.858616 | 7.292045e-63 | -8.615850e-47 |
| Msa0606340 | Msa0684130 | -0.824312 | 8.641287e-54 | -8.615850e-47 |
| Msa0611060 | Msa0684130 | 0.825191 | 5.362318e-54 | -8.615850e-47 |
| Msa0619030 | Msa0684130 | -0.859475 | 4.032521e-63 | -8.615850e-47 |
| Msa0637590 | Msa0684130 | 0.851063 | 1.132935e-60 | -8.615850e-47 |
| Msa0644330 | Msa0684130 | 0.860234 | 2.381124e-63 | -8.615850e-47 |
| Msa0644340 | Msa0684130 | 0.855620 | 5.584150e-62 | -8.615850e-47 |
| Msa0647300 | Msa0684130 | 0.808512 | 2.986757e-50 | -8.615850e-47 |
| Msa0654850 | Msa0684130 | -0.801854 | 7.397473e-49 | -8.615850e-47 |
| Msa0655940 | Msa0684130 | 0.816794 | 4.601811e-52 | -8.615850e-47 |
| Msa0657340 | Msa0684130 | 0.819426 | 1.168699e-52 | -8.615850e-47 |
| Msa0679220 | Msa0684130 | 0.813903 | 2.021837e-51 | -8.615850e-47 |
| Msa0682110 | Msa0684130 | 0.818909 | 1.532184e-52 | -8.615850e-47 |
| Msa0682160 | Msa0684130 | 0.807677 | 4.496806e-50 | -8.615850e-47 |
| Msa0684130 | Msa0686830 | 0.816413 | 5.600951e-52 | -8.615850e-47 |
| Msa0684130 | Msa0690100 | -0.815262 | 1.011623e-51 | -8.615850e-47 |
| Msa0684130 | Msa0695250 | -0.824807 | 6.606070e-54 | -8.615850e-47 |
| Msa0684130 | Msa0699170 | 0.803244 | 3.823583e-49 | -8.615850e-47 |
| Msa0684130 | Msa0699800 | 0.816908 | 4.338081e-52 | -8.615850e-47 |
| Msa0684130 | Msa0709140 | 0.830969 | 2.176260e-55 | -8.615850e-47 |
| Msa0684130 | Msa0719600 | 0.804170 | 2.456829e-49 | -8.615850e-47 |
| Msa0684130 | Msa0723770 | 0.824562 | 7.547796e-54 | -8.615850e-47 |
| Msa0684130 | Msa0725580 | 0.800357 | 1.497020e-48 | -8.615850e-47 |
| Msa0684130 | Msa0731580 | 0.824477 | 7.901199e-54 | -8.615850e-47 |
| Msa0684130 | Msa0736560 | 0.838097 | 3.520776e-57 | -8.615850e-47 |
| Msa0684130 | Msa0739820 | -0.810058 | 1.392042e-50 | -8.615850e-47 |
| Msa0684130 | Msa0743370 | 0.806269 | 8.927357e-50 | -8.615850e-47 |
| Msa0684130 | Msa0744640 | 0.810154 | 1.327517e-50 | -8.615850e-47 |
| Msa0684130 | Msa0744710 | 0.848745 | 5.039456e-60 | -8.615850e-47 |
| Msa0684130 | Msa0766170 | 0.814230 | 1.712564e-51 | -8.615850e-47 |
| Msa0684130 | Msa0788450 | -0.814824 | 1.265334e-51 | -8.615850e-47 |
| Msa0684130 | Msa0793130 | -0.809885 | 1.516725e-50 | -8.615850e-47 |
| Msa0684130 | Msa0800150 | 0.807513 | 4.872616e-50 | -8.615850e-47 |
| Msa0684130 | Msa0804870 | 0.800671 | 1.291759e-48 | -8.615850e-47 |
| Msa0684130 | Msa0809920 | 0.813531 | 2.441980e-51 | -8.615850e-47 |
| Msa0684130 | Msa0810330 | 0.810744 | 9.896247e-51 | -8.615850e-47 |
| Msa0684130 | Msa0820130 | -0.810921 | 9.063019e-51 | -8.615850e-47 |
| Msa0684130 | Msa0825570 | -0.814452 | 1.529692e-51 | -8.615850e-47 |
| Msa0684130 | Msa0826240 | 0.844338 | 8.040963e-59 | -8.615850e-47 |
| Msa0684130 | Msa0826540 | -0.818800 | 1.622628e-52 | -8.615850e-47 |
| Msa0684130 | Msa0829250 | -0.819025 | 1.441961e-52 | -8.615850e-47 |
| Msa0684130 | Msa0829990 | 0.812766 | 3.593664e-51 | -8.615850e-47 |
| Msa0684130 | Msa0832950 | 0.816959 | 4.226883e-52 | -8.615850e-47 |
| Msa0684130 | Msa0833270 | 0.845227 | 4.630782e-59 | -8.615850e-47 |
| Msa0684130 | Msa0841730 | 0.809306 | 2.019183e-50 | -8.615850e-47 |
| Msa0684130 | Msa0842750 | 0.801392 | 9.202174e-49 | -8.615850e-47 |
| Msa0684130 | Msa0856080 | 0.817731 | 2.831663e-52 | -8.615850e-47 |
| Msa0684130 | Msa0864820 | -0.812051 | 5.149770e-51 | -8.615850e-47 |
| Msa0684130 | Msa0882480 | -0.836628 | 8.371821e-57 | -8.615850e-47 |
| Msa0684130 | Msa0901270 | 0.815261 | 1.012014e-51 | -8.615850e-47 |
| Msa0684130 | Msa0905570 | 0.805823 | 1.108298e-49 | -8.615850e-47 |
| Msa0684130 | Msa0919120 | -0.832452 | 9.379997e-56 | -8.615850e-47 |
| Msa0684130 | Msa0925940 | 0.828094 | 1.087916e-54 | -8.615850e-47 |
| Msa0684130 | Msa0945160 | -0.821849 | 3.244081e-53 | -8.615850e-47 |
| Msa0684130 | Msa0966580 | 0.860911 | 1.483982e-63 | -8.615850e-47 |
| Msa0684130 | Msa0966590 | 0.816717 | 4.788810e-52 | -8.615850e-47 |
| Msa0684130 | Msa1001120 | 0.828967 | 6.698445e-55 | -8.615850e-47 |
| Msa0684130 | Msa1002550 | -0.817856 | 2.653653e-52 | -8.615850e-47 |
| Msa0684130 | Msa1003920 | 0.804309 | 2.298284e-49 | -8.615850e-47 |
| Msa0684130 | Msa1011140 | -0.811060 | 8.457757e-51 | -8.615850e-47 |
| Msa0684130 | Msa1027340 | 0.811435 | 7.010185e-51 | -8.615850e-47 |
| Msa0684130 | Msa1027400 | 0.815158 | 1.066799e-51 | -8.615850e-47 |
| Msa0684130 | Msa1030210 | 0.826417 | 2.744434e-54 | -8.615850e-47 |
| Msa0684130 | Msa1034950 | 0.829478 | 5.034788e-55 | -8.615850e-47 |
| Msa0684130 | Msa1035050 | 0.842420 | 2.614673e-58 | -8.615850e-47 |
| Msa0684130 | Msa1058550 | -0.817941 | 2.539181e-52 | -8.615850e-47 |
| Msa0684130 | Msa1061550 | 0.803879 | 2.824287e-49 | -8.615850e-47 |
| Msa0684130 | Msa1062060 | 0.805082 | 1.584718e-49 | -8.615850e-47 |
| Msa0684130 | Msa1069250 | 0.800380 | 1.481109e-48 | -8.615850e-47 |
| Msa0684130 | Msa1075010 | 0.828352 | 9.427913e-55 | -8.615850e-47 |
| Msa0684130 | Msa1075090 | 0.854795 | 9.699250e-62 | -8.615850e-47 |
| Msa0684130 | Msa1077970 | 0.867355 | 1.454912e-65 | -8.615850e-47 |
| Msa0684130 | Msa1078120 | -0.805475 | 1.311170e-49 | -8.615850e-47 |
| Msa0684130 | Msa1088970 | 0.802440 | 5.603635e-49 | -8.615850e-47 |
| Msa0684130 | Msa1092310 | 0.823407 | 1.408709e-53 | -8.615850e-47 |
| Msa0684130 | Msa1094810 | 0.826039 | 3.375454e-54 | -8.615850e-47 |
| Msa0684130 | Msa1095590 | 0.814710 | 1.341129e-51 | -8.615850e-47 |
| Msa0684130 | Msa1102210 | 0.810303 | 1.232489e-50 | -8.615850e-47 |
| Msa0684130 | Msa1107220 | 0.827186 | 1.797765e-54 | -8.615850e-47 |
| Msa0684130 | Msa1110900 | 0.800886 | 1.167661e-48 | -8.615850e-47 |
| Msa0684130 | Msa1115980 | 0.837131 | 6.230252e-57 | -8.615850e-47 |
| Msa0684130 | Msa1120580 | 0.802681 | 4.997722e-49 | -8.615850e-47 |
| Msa0684130 | Msa1121720 | -0.806233 | 9.086944e-50 | -8.615850e-47 |
| Msa0684130 | Msa1128520 | -0.802035 | 6.791299e-49 | -8.615850e-47 |
| Msa0684130 | Msa1129120 | -0.808183 | 3.510326e-50 | -8.615850e-47 |
| Msa0684130 | Msa1130150 | -0.826854 | 2.158526e-54 | -8.615850e-47 |
| Msa0684130 | Msa1131120 | 0.817796 | 2.737654e-52 | -8.615850e-47 |
| Msa0684130 | Msa1136760 | 0.811630 | 6.359875e-51 | -8.615850e-47 |
| Msa0684130 | Msa1137750 | 0.811684 | 6.188935e-51 | -8.615850e-47 |
| Msa0684130 | Msa1150760 | 0.809768 | 1.607391e-50 | -8.615850e-47 |
| Msa0684130 | Msa1154060 | 0.807739 | 4.361982e-50 | -8.615850e-47 |
| Msa0684130 | Msa1154570 | 0.810018 | 1.419716e-50 | -8.615850e-47 |
| Msa0684130 | Msa1156100 | -0.819661 | 1.033234e-52 | -8.615850e-47 |
| Msa0684130 | Msa1157110 | 0.807759 | 4.321063e-50 | -8.615850e-47 |
| Msa0684130 | Msa1162430 | 0.806856 | 6.712998e-50 | -8.615850e-47 |
| Msa0684130 | Msa1174280 | 0.809188 | 2.140887e-50 | -8.615850e-47 |
| Msa0684130 | Msa1177650 | 0.817180 | 3.768347e-52 | -8.615850e-47 |
| Msa0684130 | Msa1185270 | 0.822424 | 2.386524e-53 | -8.615850e-47 |
| Msa0684130 | Msa1197740 | -0.827126 | 1.858599e-54 | -8.615850e-47 |
| Msa0684130 | Msa1199540 | -0.803836 | 2.882934e-49 | -8.615850e-47 |
| Msa0684130 | Msa1202110 | 0.828683 | 7.845202e-55 | -8.615850e-47 |
| Msa0684130 | Msa1203810 | 0.804321 | 2.285334e-49 | -8.615850e-47 |
| Msa0684130 | Msa1204870 | -0.800472 | 1.418246e-48 | -8.615850e-47 |
| Msa0684130 | Msa1211610 | 0.815380 | 9.523752e-52 | -8.615850e-47 |
| Msa0684130 | Msa1212150 | -0.815321 | 9.816503e-52 | -8.615850e-47 |
| Msa0684130 | Msa1212210 | -0.813502 | 2.478387e-51 | -8.615850e-47 |
| Msa0684130 | Msa1219530 | -0.802549 | 5.321855e-49 | -8.615850e-47 |
| Msa0684130 | Msa1221270 | 0.818005 | 2.456048e-52 | -8.615850e-47 |
| Msa0684130 | Msa1236120 | -0.814155 | 1.779647e-51 | -8.615850e-47 |
| Msa0684130 | Msa1239210 | 0.824475 | 7.912687e-54 | -8.615850e-47 |
| Msa0684130 | Msa1239940 | 0.806857 | 6.709130e-50 | -8.615850e-47 |
| Msa0684130 | Msa1241740 | 0.815292 | 9.963721e-52 | -8.615850e-47 |
| Msa0684130 | Msa1248060 | 0.800636 | 1.313127e-48 | -8.615850e-47 |
| Msa0684130 | Msa1251440 | -0.820948 | 5.236665e-53 | -8.615850e-47 |
| Msa0684130 | Msa1254870 | 0.827245 | 1.740071e-54 | -8.615850e-47 |
| Msa0684130 | Msa1256490 | -0.801701 | 7.954286e-49 | -8.615850e-47 |
| Msa0684130 | Msa1268390 | 0.806212 | 9.178022e-50 | -8.615850e-47 |
| Msa0684130 | Msa1269200 | 0.812943 | 3.287386e-51 | -8.615850e-47 |
| Msa0684130 | Msa1280960 | 0.803657 | 3.140275e-49 | -8.615850e-47 |
| Msa0684130 | Msa1287100 | -0.806927 | 6.484256e-50 | -8.615850e-47 |
| Msa0684130 | Msa1289050 | 0.816723 | 4.773619e-52 | -8.615850e-47 |
| Msa0684130 | Msa1289090 | 0.815878 | 7.378274e-52 | -8.615850e-47 |
| Msa0684130 | Msa1299480 | 0.802969 | 4.358789e-49 | -8.615850e-47 |
| Msa0684130 | Msa1307530 | 0.829378 | 5.322103e-55 | -8.615850e-47 |
| Msa0684130 | Msa1317740 | 0.819796 | 9.621373e-53 | -8.615850e-47 |
| Msa0684130 | Msa1320160 | 0.826454 | 2.689344e-54 | -8.615850e-47 |
| Msa0684130 | Msa1328430 | 0.829102 | 6.212088e-55 | -8.615850e-47 |
| Msa0684130 | Msa1331570 | -0.802538 | 5.349063e-49 | -8.615850e-47 |
| Msa0684130 | Msa1333220 | -0.822964 | 1.786728e-53 | -8.615850e-47 |
| Msa0684130 | Msa1341710 | -0.802786 | 4.755275e-49 | -8.615850e-47 |
| Msa0684130 | Msa1350130 | -0.800530 | 1.380493e-48 | -8.615850e-47 |
| Msa0684130 | Msa1350590 | -0.807517 | 4.863813e-50 | -8.615850e-47 |
| Msa0684130 | Msa1356100 | -0.806397 | 8.390729e-50 | -8.615850e-47 |
| Msa0684130 | Msa1357570 | 0.828396 | 9.203725e-55 | -8.615850e-47 |
| Msa0684130 | Msa1373420 | -0.812150 | 4.899559e-51 | -8.615850e-47 |
| Msa0684130 | Msa1386910 | -0.814853 | 1.247103e-51 | -8.615850e-47 |
| Msa0684130 | Msa1388720 | -0.807530 | 4.832637e-50 | -8.615850e-47 |
| Msa0684130 | Msa1395200 | -0.826882 | 2.125281e-54 | -8.615850e-47 |
| Msa0684130 | Msa1395250 | 0.810507 | 1.113572e-50 | -8.615850e-47 |
| Msa0684130 | Msa1398140 | 0.812298 | 4.548374e-51 | -8.615850e-47 |
| Msa0684130 | Msa1399030 | 0.810284 | 1.244617e-50 | -8.615850e-47 |
| Msa0684130 | Msa1404050 | 0.865234 | 6.846983e-65 | -8.615850e-47 |
| Msa0684130 | Msa1405530 | 0.818221 | 2.195341e-52 | -8.615850e-47 |
| Msa0684130 | Msa1407040 | 0.806378 | 8.467489e-50 | -8.615850e-47 |
| Msa0684130 | Msa1408230 | -0.809204 | 2.123478e-50 | -8.615850e-47 |
| Msa0684130 | Msa1409360 | -0.801699 | 7.961412e-49 | -8.615850e-47 |
| Msa0684130 | Msa1410480 | -0.803808 | 2.921521e-49 | -8.615850e-47 |
| Msa0684130 | Msa1410500 | -0.806991 | 6.285857e-50 | -8.615850e-47 |
| Msa0684130 | Msa1415510 | -0.820679 | 6.038855e-53 | -8.615850e-47 |
| Msa0684130 | Msa1455200 | 0.804283 | 2.327249e-49 | -8.615850e-47 |
| Msa0684130 | Msa1455480 | 0.832288 | 1.029940e-55 | -8.615850e-47 |
| Msa0127350 | Msa0684130 | -0.821968 | 3.044996e-53 | -8.615850e-47 |
| Msa0129770 | Msa0684130 | 0.819456 | 1.150288e-52 | -8.615850e-47 |
| Msa0129820 | Msa0684130 | -0.803318 | 3.691841e-49 | -8.615850e-47 |
| Msa0139680 | Msa0684130 | 0.829632 | 4.617275e-55 | -8.615850e-47 |
| Msa0150620 | Msa0684130 | 0.807293 | 5.425581e-50 | -8.615850e-47 |
| Msa0150640 | Msa0684130 | 0.815447 | 9.201068e-52 | -8.615850e-47 |
| Msa0151380 | Msa0684130 | -0.803080 | 4.134880e-49 | -8.615850e-47 |
| Msa0167160 | Msa0684130 | -0.824878 | 6.356983e-54 | -8.615850e-47 |
| Msa0168770 | Msa0684130 | -0.805866 | 1.085566e-49 | -8.615850e-47 |
| Msa0171330 | Msa0684130 | 0.809388 | 1.939113e-50 | -8.615850e-47 |
| Msa0185040 | Msa0684130 | 0.834509 | 2.876813e-56 | -8.615850e-47 |
| Msa0186240 | Msa0684130 | 0.816809 | 4.566836e-52 | -8.615850e-47 |
| Msa0186400 | Msa0684130 | -0.800196 | 1.614524e-48 | -8.615850e-47 |
| Msa0193950 | Msa0684130 | 0.816528 | 5.280306e-52 | -8.615850e-47 |
| Msa0203090 | Msa0684130 | 0.808173 | 3.526925e-50 | -8.615850e-47 |
| Msa0217060 | Msa0684130 | 0.812328 | 4.480387e-51 | -8.615850e-47 |
| Msa0224870 | Msa0684130 | 0.813058 | 3.102452e-51 | -8.615850e-47 |
| Msa0225190 | Msa0684130 | -0.824762 | 6.770755e-54 | -8.615850e-47 |
| Msa0225280 | Msa0684130 | -0.803029 | 4.236879e-49 | -8.615850e-47 |
| Msa0383900 | Msa0684130 | 0.828075 | 1.099758e-54 | -8.615850e-47 |
| Msa0398390 | Msa0684130 | 0.848176 | 7.243177e-60 | -8.615850e-47 |
| Msa0405200 | Msa0684130 | 0.817079 | 3.971091e-52 | -8.615850e-47 |
| Msa0415100 | Msa0684130 | 0.814324 | 1.633002e-51 | -8.615850e-47 |
| Msa0434300 | Msa0684130 | 0.836257 | 1.040650e-56 | -8.615850e-47 |
| Msa0434400 | Msa0684130 | 0.836208 | 1.070901e-56 | -8.615850e-47 |
| Msa0437820 | Msa0684130 | -0.805774 | 1.134768e-49 | -8.615850e-47 |
| Msa0442860 | Msa0684130 | 0.825406 | 4.771146e-54 | -8.615850e-47 |
| Msa0444770 | Msa0684130 | -0.823914 | 1.071613e-53 | -8.615850e-47 |
| Msa0449490 | Msa0684130 | 0.808726 | 2.688030e-50 | -8.615850e-47 |
| Msa0449500 | Msa0684130 | 0.809067 | 2.272099e-50 | -8.615850e-47 |
| Msa0476890 | Msa0684130 | -0.801481 | 8.824546e-49 | -8.615850e-47 |
| Msa0242720 | Msa0684130 | 0.819172 | 1.335448e-52 | -8.615850e-47 |
| Msa0253230 | Msa0684130 | -0.818318 | 2.086433e-52 | -8.615850e-47 |
| Msa0256920 | Msa0684130 | 0.811814 | 5.798756e-51 | -8.615850e-47 |
| Msa0261350 | Msa0684130 | -0.805971 | 1.031507e-49 | -8.615850e-47 |
| Msa0262350 | Msa0684130 | -0.832667 | 8.296296e-56 | -8.615850e-47 |
| Msa0265650 | Msa0684130 | 0.812506 | 4.097238e-51 | -8.615850e-47 |
| Msa0266330 | Msa0684130 | -0.804021 | 2.637715e-49 | -8.615850e-47 |
| Msa0275730 | Msa0684130 | 0.809084 | 2.253791e-50 | -8.615850e-47 |
| Msa0281000 | Msa0684130 | 0.805408 | 1.354372e-49 | -8.615850e-47 |
| Msa0282960 | Msa0684130 | 0.825283 | 5.100338e-54 | -8.615850e-47 |
| Msa0285890 | Msa0684130 | 0.807070 | 6.048072e-50 | -8.615850e-47 |
| Msa0294200 | Msa0684130 | 0.807119 | 5.906741e-50 | -8.615850e-47 |
| Msa0298000 | Msa0684130 | 0.809239 | 2.087768e-50 | -8.615850e-47 |
| Msa0299130 | Msa0684130 | -0.808220 | 3.446920e-50 | -8.615850e-47 |
| Msa0300130 | Msa0684130 | -0.829109 | 6.186003e-55 | -8.615850e-47 |
| Msa0303900 | Msa0684130 | 0.806126 | 9.571493e-50 | -8.615850e-47 |
| Msa0310190 | Msa0684130 | 0.808089 | 3.676075e-50 | -8.615850e-47 |
| Msa0311480 | Msa0684130 | 0.805536 | 1.273038e-49 | -8.615850e-47 |
| Msa0319680 | Msa0684130 | 0.822787 | 1.965266e-53 | -8.615850e-47 |
| Msa0320170 | Msa0684130 | 0.865637 | 5.109787e-65 | -8.615850e-47 |
| Msa0333770 | Msa0684130 | 0.804776 | 1.836454e-49 | -8.615850e-47 |
| Msa0340370 | Msa0684130 | 0.802865 | 4.580986e-49 | -8.615850e-47 |
| Msa0340700 | Msa0684130 | -0.815918 | 7.227120e-52 | -8.615850e-47 |
| Msa0345050 | Msa0684130 | 0.845728 | 3.388515e-59 | -8.615850e-47 |
| Msa0345890 | Msa0684130 | 0.812340 | 4.454129e-51 | -8.615850e-47 |
| Msa0490100 | Msa0684130 | 0.811455 | 6.942530e-51 | -8.615850e-47 |
| Msa0490320 | Msa0684130 | 0.806300 | 8.795357e-50 | -8.615850e-47 |
| Msa0492330 | Msa0684130 | -0.808409 | 3.141603e-50 | -8.615850e-47 |
| Msa0497680 | Msa0684130 | 0.815583 | 8.582476e-52 | -8.615850e-47 |
| Msa0497690 | Msa0684130 | 0.830116 | 3.520127e-55 | -8.615850e-47 |
| Msa0522140 | Msa0684130 | 0.833349 | 5.612245e-56 | -8.615850e-47 |
| Msa0522170 | Msa0684130 | 0.822966 | 1.784802e-53 | -8.615850e-47 |
| Msa0534610 | Msa0684130 | 0.800351 | 1.501171e-48 | -8.615850e-47 |
| Msa0535400 | Msa0684130 | 0.816672 | 4.900477e-52 | -8.615850e-47 |
| Msa0548410 | Msa0684130 | 0.889512 | 2.265915e-73 | -8.615850e-47 |
| Msa0548420 | Msa0684130 | 0.835979 | 1.224035e-56 | -8.615850e-47 |
| Msa0550980 | Msa0684130 | -0.813650 | 2.298813e-51 | -8.615850e-47 |
| Msa0550990 | Msa0684130 | -0.824071 | 9.842999e-54 | -8.615850e-47 |
| Msa0557440 | Msa0684130 | -0.815912 | 7.250620e-52 | -8.615850e-47 |
| Msa0561450 | Msa0684130 | -0.806390 | 8.419087e-50 | -8.615850e-47 |
| Msa0562580 | Msa0684130 | 0.804899 | 1.730742e-49 | -8.615850e-47 |
| Msa0565180 | Msa0684130 | 0.819960 | 8.827829e-53 | -8.615850e-47 |
| Msa0565370 | Msa0684130 | -0.806109 | 9.648044e-50 | -8.615850e-47 |
| Msa0565430 | Msa0684130 | -0.803634 | 3.174517e-49 | -8.615850e-47 |
| Msa0567330 | Msa0684130 | 0.800102 | 1.686998e-48 | -8.615850e-47 |
| Msa0580890 | Msa0684130 | -0.812161 | 4.872943e-51 | -8.615850e-47 |
| Msa0581350 | Msa0684130 | 0.811444 | 6.979242e-51 | -8.615850e-47 |
| Msa0583270 | Msa0684130 | -0.800467 | 1.422051e-48 | -8.615850e-47 |
| Msa0588040 | Msa0684130 | 0.809161 | 2.169285e-50 | -8.615850e-47 |
| Msa0590620 | Msa0684130 | -0.822701 | 2.057888e-53 | -8.615850e-47 |
| Msa0590810 | Msa0684130 | 0.811588 | 6.495702e-51 | -8.615850e-47 |
| Msa0597180 | Msa0684130 | 0.823079 | 1.679674e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684130 | MtrunA17_Chr4g0031511 | 77.850 | 307 | 14 | 2 | 1 | 253 | 1 | 307 | 1.02e-166 | 462 |
| Msa0684130 | MtrunA17_Chr1g0187501 | 43.333 | 90 | 50 | 1 | 7 | 95 | 8 | 97 | 8.18e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684130 | AT3G46540.2 | 42.529 | 261 | 69 | 9 | 1 | 194 | 1 | 247 | 6.27e-38 | 135 |
| Msa0684130 | AT3G46540.1 | 42.529 | 261 | 69 | 9 | 1 | 194 | 13 | 259 | 6.89e-38 | 135 |
| Msa0684130 | AT1G08670.1 | 33.714 | 175 | 60 | 4 | 1 | 119 | 5 | 179 | 6.53e-21 | 88.6 |
| Msa0684130 | AT3G23350.1 | 42.424 | 99 | 44 | 2 | 5 | 95 | 6 | 99 | 1.37e-18 | 83.2 |
| Msa0684130 | AT3G23350.2 | 42.424 | 99 | 44 | 2 | 5 | 95 | 7 | 100 | 1.43e-18 | 83.2 |
| Msa0684130 | AT3G46540.3 | 36.000 | 225 | 64 | 8 | 36 | 194 | 1 | 211 | 3.58e-16 | 76.3 |
Find 64 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCTGTTGTTGAATTAA+AGG | 0.166107 | 4_4:+47439070 | None:intergenic |
| ATCAAGTTCTAAAGAAAATA+TGG | 0.298192 | 4_4:-47439201 | Msa0684130:CDS |
| GCGGAGAAGACGATTCTTCT+AGG | 0.298733 | 4_4:-47439124 | Msa0684130:CDS |
| TGGAGAGTCAGAATCACTTT+TGG | 0.312508 | 4_4:-47439150 | Msa0684130:CDS |
| ATTTCTGTTGTTGAATTAAA+GGG | 0.325448 | 4_4:+47439071 | None:intergenic |
| GACAATTTGCAGGTTCAATT+GGG | 0.329268 | 4_4:-47439540 | Msa0684130:intron |
| TTATAGAGATTCTACATAAA+AGG | 0.331852 | 4_4:-47440251 | Msa0684130:intron |
| TGACAATTTGCAGGTTCAAT+TGG | 0.347533 | 4_4:-47439541 | Msa0684130:intron |
| ATCATCATCTTTGTATATCA+TGG | 0.354388 | 4_4:+47439256 | None:intergenic |
| TCAAGAGGTATTCAAGGTTT+CGG | 0.389050 | 4_4:-47439425 | Msa0684130:CDS |
| AATTCATCTTTCTCAACCTT+GGG | 0.396896 | 4_4:-47439290 | Msa0684130:CDS |
| AAGAAAATATGGAACCTAGT+AGG | 0.398302 | 4_4:-47439190 | Msa0684130:CDS |
| TAATTCATCTTTCTCAACCT+TGG | 0.418793 | 4_4:-47439291 | Msa0684130:CDS |
| CTGATTTCTTTCTCACAGTT+AGG | 0.420075 | 4_4:+47439516 | None:intergenic |
| AGAGAGAGTAATGAAACTAT+TGG | 0.421249 | 4_4:-47439495 | Msa0684130:CDS |
| TTGGTAGAACCTCCCTTCAA+TGG | 0.425415 | 4_4:-47438907 | Msa0684130:three_prime_UTR |
| CTCTATTTATACATTGTGTA+AGG | 0.429047 | 4_4:-47438867 | Msa0684130:three_prime_UTR |
| AAGAAAGAAACCAATGTAGA+AGG | 0.430906 | 4_4:-47439451 | Msa0684130:CDS |
| CAATGATTTCTCGCGAAGAA+TGG | 0.431381 | 4_4:+47439370 | None:intergenic |
| ATGATAGAAGAGGCAACTAA+TGG | 0.435665 | 4_4:-47440351 | Msa0684130:CDS |
| AAGACGATTCTTCTAGGCTT+GGG | 0.437856 | 4_4:-47439118 | Msa0684130:CDS |
| TCCTTGCTTTCTGCTAGAGA+TGG | 0.439226 | 4_4:-47439035 | Msa0684130:CDS |
| ATATACAAAGATGATGATAT+AGG | 0.448838 | 4_4:-47439251 | Msa0684130:CDS |
| CTCAAACAACTACGAAGATC+AGG | 0.449845 | 4_4:-47439318 | Msa0684130:CDS |
| CTTACACAATGTATAAATAG+AGG | 0.454200 | 4_4:+47438868 | None:intergenic |
| AAATCATTGCCAACCACATT+CGG | 0.454765 | 4_4:-47439356 | Msa0684130:CDS |
| AAGTTCCACACCTCCCTACT+AGG | 0.456583 | 4_4:+47439176 | None:intergenic |
| AGGTTATCAAGAGGTATTCA+AGG | 0.457152 | 4_4:-47439431 | Msa0684130:CDS |
| GAAGACGATTCTTCTAGGCT+TGG | 0.466472 | 4_4:-47439119 | Msa0684130:CDS |
| AGAAAATATGGAACCTAGTA+GGG | 0.473708 | 4_4:-47439189 | Msa0684130:CDS |
| GATCTGAGGGTTACAGTAGT+TGG | 0.473866 | 4_4:+47440315 | None:intergenic |
| ACATAGAGAGGGACCATTGA+AGG | 0.481769 | 4_4:+47438894 | None:intergenic |
| TCGCGAAGAATGGCTTGTGT+TGG | 0.484587 | 4_4:+47439380 | None:intergenic |
| TAGTAGGGAGGTGTGGAACT+TGG | 0.490662 | 4_4:-47439174 | Msa0684130:CDS |
| CTCTTGATAACCTTCTACAT+TGG | 0.492948 | 4_4:+47439441 | None:intergenic |
| GTTACAGTAGTTGGTGCCCA+TGG | 0.502809 | 4_4:+47440324 | None:intergenic |
| AGGGAGGTGTGGAACTTGGA+TGG | 0.503033 | 4_4:-47439170 | Msa0684130:CDS |
| TAACAAGCTCACAGTTCTGC+AGG | 0.506386 | 4_4:+47440508 | None:intergenic |
| AGCCTTTGAAATTGATCTGA+GGG | 0.520257 | 4_4:+47440302 | None:intergenic |
| AGGCAACTAATGGAAATCCA+TGG | 0.532106 | 4_4:-47440341 | Msa0684130:CDS |
| GTAATGAAACTATTGGAAGA+AGG | 0.539452 | 4_4:-47439488 | Msa0684130:CDS |
| ATGTTTATTTCCTTCCTCAA+AGG | 0.541875 | 4_4:+47443058 | None:intergenic |
| GCTAGAGATGGAATACTACA+AGG | 0.551404 | 4_4:-47439023 | Msa0684130:CDS |
| CAGCCTTTGAAATTGATCTG+AGG | 0.552074 | 4_4:+47440301 | None:intergenic |
| CATAGAGAGGGACCATTGAA+GGG | 0.552681 | 4_4:+47438895 | None:intergenic |
| TGTACATGAAATCATGTATG+TGG | 0.563014 | 4_4:-47438949 | Msa0684130:three_prime_UTR |
| TCCATCTCTAGCAGAAAGCA+AGG | 0.572809 | 4_4:+47439034 | None:intergenic |
| AAATAGAGGTTTACATAGAG+AGG | 0.573325 | 4_4:+47438882 | None:intergenic |
| TTTCTGTTGTTGAATTAAAG+GGG | 0.580526 | 4_4:+47439072 | None:intergenic |
| ACAATTTGCAGGTTCAATTG+GGG | 0.587617 | 4_4:-47439539 | Msa0684130:intron |
| TTGAGCTAGATGATTATAGG+AGG | 0.590229 | 4_4:-47440275 | Msa0684130:CDS |
| AATAGAGGTTTACATAGAGA+GGG | 0.592771 | 4_4:+47438883 | None:intergenic |
| GGCAACTAATGGAAATCCAT+GGG | 0.593719 | 4_4:-47440340 | Msa0684130:CDS |
| AACCCTCAGATCAATTTCAA+AGG | 0.602620 | 4_4:-47440304 | Msa0684130:CDS |
| TGAATTACATCTACCGAATG+TGG | 0.602951 | 4_4:+47439343 | None:intergenic |
| ACGATTCTTCTAGGCTTGGG+AGG | 0.614811 | 4_4:-47439115 | Msa0684130:CDS |
| TTACATCTACCGAATGTGGT+TGG | 0.615754 | 4_4:+47439347 | None:intergenic |
| GGAAGAAGGAAATCTTCTCA+AGG | 0.620593 | 4_4:-47439474 | Msa0684130:CDS |
| TGGAACCTAGTAGGGAGGTG+TGG | 0.635291 | 4_4:-47439181 | Msa0684130:CDS |
| CAATGTAGAAGGTTATCAAG+AGG | 0.650694 | 4_4:-47439440 | Msa0684130:CDS |
| AAATATGGAACCTAGTAGGG+AGG | 0.663757 | 4_4:-47439186 | Msa0684130:CDS |
| CTAGAGATGGAATACTACAA+GGG | 0.670524 | 4_4:-47439022 | Msa0684130:CDS |
| TCTTTGAAGAATGATAGAAG+AGG | 0.674445 | 4_4:-47440361 | Msa0684130:intron |
| AGAGAGGGACCATTGAAGGG+AGG | 0.712283 | 4_4:+47438898 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTATTATTAAATAAAGAA+AGG | + | chr4_4:47439172-47439191 | None:intergenic | 10.0% |
| !! | AGAAAAGTTTATTAAAATAA+AGG | + | chr4_4:47439277-47439296 | None:intergenic | 10.0% |
| !! | TTAATATATTAATAAAACCT+AGG | + | chr4_4:47439804-47439823 | None:intergenic | 10.0% |
| !! | TCAATATATTAATAAAACAT+AGG | + | chr4_4:47440267-47440286 | None:intergenic | 10.0% |
| !! | ATATATTGAAAAAATATATG+TGG | - | chr4_4:47440278-47440297 | Msa0684130:CDS | 10.0% |
| !! | TATATTGAAAAAATATATGT+GGG | - | chr4_4:47440279-47440298 | Msa0684130:CDS | 10.0% |
| !! | TAATATTAATAAAGTATATG+TGG | - | chr4_4:47440771-47440790 | Msa0684130:intron | 10.0% |
| !! | AATATTAATAAAGTATATGT+GGG | - | chr4_4:47440772-47440791 | Msa0684130:intron | 10.0% |
| !!! | TTTTATTTACTAATATGTTT+TGG | + | chr4_4:47439545-47439564 | None:intergenic | 10.0% |
| !! | AAAATTGTGTAAAAAAAATA+AGG | + | chr4_4:47442118-47442137 | None:intergenic | 10.0% |
| !! | AAAAAATTTGGAAGAAAATT+AGG | + | chr4_4:47439029-47439048 | None:intergenic | 15.0% |
| !!! | TTCTTATTTCTGAAATTTAA+TGG | - | chr4_4:47439904-47439923 | Msa0684130:intron | 15.0% |
| !!! | TCTTATTTCTGAAATTTAAT+GGG | - | chr4_4:47439905-47439924 | Msa0684130:intron | 15.0% |
| !!! | TATCTCACTATATTTTTTTA+CGG | - | chr4_4:47439983-47440002 | Msa0684130:intron | 15.0% |
| !!! | TACATTTTTAAAGAAAACAA+TGG | + | chr4_4:47440596-47440615 | None:intergenic | 15.0% |
| !! | ATAAAATATATATGAGTGTA+TGG | - | chr4_4:47440901-47440920 | Msa0684130:intron | 15.0% |
| !!! | CAATTAATTATGATTTTTCA+CGG | - | chr4_4:47441026-47441045 | Msa0684130:intron | 15.0% |
| !!! | AATTAATTATGATTTTTCAC+GGG | - | chr4_4:47441027-47441046 | Msa0684130:intron | 15.0% |
| !!! | TTTTTAGGTAAACAATTTTT+TGG | + | chr4_4:47442314-47442333 | None:intergenic | 15.0% |
| !! | AATTGTTTACCTAAAAAATT+TGG | - | chr4_4:47442317-47442336 | Msa0684130:intron | 15.0% |
| !!! | TTTATCTATCATTATGTTTT+TGG | - | chr4_4:47443007-47443026 | Msa0684130:exon | 15.0% |
| !!! | TTTTTTGAATTCATAGAAAG+GGG | + | chr4_4:47438943-47438962 | None:intergenic | 20.0% |
| !!! | GTTTTTTGAATTCATAGAAA+GGG | + | chr4_4:47438944-47438963 | None:intergenic | 20.0% |
| !!! | TGTTTTTTGAATTCATAGAA+AGG | + | chr4_4:47438945-47438964 | None:intergenic | 20.0% |
| !! | AGTTGTAAAGGAAAAAAATT+TGG | + | chr4_4:47439041-47439060 | None:intergenic | 20.0% |
| !!! | TTTTTTCCTTTACAACTTTA+AGG | - | chr4_4:47439044-47439063 | Msa0684130:CDS | 20.0% |
| !! | AAATAACCTTAAAGTTGTAA+AGG | + | chr4_4:47439053-47439072 | None:intergenic | 20.0% |
| !! | AAATGATAAATGAAGAAAGA+TGG | + | chr4_4:47439336-47439355 | None:intergenic | 20.0% |
| !! | TTGAAAATTAGTAGAGAAAA+TGG | + | chr4_4:47439378-47439397 | None:intergenic | 20.0% |
| !!! | TACTAACAAGTTTTTTTTAG+AGG | - | chr4_4:47439406-47439425 | Msa0684130:CDS | 20.0% |
| !!! | ACGTTAATTATGTTTTTTCA+CGG | - | chr4_4:47439496-47439515 | Msa0684130:CDS | 20.0% |
| !!! | TATGAGTAATGTTTGTTTTA+TGG | - | chr4_4:47439866-47439885 | Msa0684130:intron | 20.0% |
| !!! | ATGAGTAATGTTTGTTTTAT+GGG | - | chr4_4:47439867-47439886 | Msa0684130:intron | 20.0% |
| !!! | ATCTCACTATATTTTTTTAC+GGG | - | chr4_4:47439984-47440003 | Msa0684130:intron | 20.0% |
| !!! | GTGATACATTTTCAAAAAAA+GGG | + | chr4_4:47440131-47440150 | None:intergenic | 20.0% |
| !!! | AGTGATACATTTTCAAAAAA+AGG | + | chr4_4:47440132-47440151 | None:intergenic | 20.0% |
| !! | TGTATCACTAAAAAAATCAT+TGG | - | chr4_4:47440143-47440162 | Msa0684130:intron | 20.0% |
| !!! | GTGAGTATATATTTGTTTTA+CGG | - | chr4_4:47440334-47440353 | Msa0684130:CDS | 20.0% |
| !!! | TGAGTATATATTTGTTTTAC+GGG | - | chr4_4:47440335-47440354 | Msa0684130:CDS | 20.0% |
| !! | GATAAATATATATGAGTGTA+TGG | - | chr4_4:47440407-47440426 | Msa0684130:intron | 20.0% |
| !!! | TCTCACTATATGTTTTTATA+CGG | - | chr4_4:47440452-47440471 | Msa0684130:intron | 20.0% |
| !!! | ATGAGTATATGTTTGTTTTA+CGG | - | chr4_4:47440825-47440844 | Msa0684130:intron | 20.0% |
| !!! | TATCTCACTGTATTTTTTTA+CGG | - | chr4_4:47440944-47440963 | Msa0684130:intron | 20.0% |
| !! | TTATAGAGATTCTACATAAA+AGG | - | chr4_4:47441682-47441701 | Msa0684130:intron | 20.0% |
| !! | ATGCTAAGTAAAAAAAATGA+GGG | + | chr4_4:47441720-47441739 | None:intergenic | 20.0% |
| !!! | GATACAATTCTAAAATAGAT+TGG | - | chr4_4:47441924-47441943 | Msa0684130:intron | 20.0% |
| !! | CTAAATTTGAAAAGAAGAAT+TGG | - | chr4_4:47441947-47441966 | Msa0684130:intron | 20.0% |
| !!! | ATTCAATGACCAAATTTTTT+AGG | + | chr4_4:47442329-47442348 | None:intergenic | 20.0% |
| !! | ATATACAAAGATGATGATAT+AGG | - | chr4_4:47442682-47442701 | Msa0684130:intron | 20.0% |
| !!! | ATCAAGTTCTAAAGAAAATA+TGG | - | chr4_4:47442732-47442751 | Msa0684130:intron | 20.0% |
| !! | ATTTCTGTTGTTGAATTAAA+GGG | + | chr4_4:47442865-47442884 | None:intergenic | 20.0% |
| ! | TATGGGTAATTAAGTAACTT+TGG | + | chr4_4:47439006-47439025 | None:intergenic | 25.0% |
| ! | TTTGGAAGAAAATTAGGTAT+GGG | + | chr4_4:47439023-47439042 | None:intergenic | 25.0% |
| ! | ATTTGGAAGAAAATTAGGTA+TGG | + | chr4_4:47439024-47439043 | None:intergenic | 25.0% |
| ! | ATAAAGAAAGGTGAAAAAGT+GGG | + | chr4_4:47439160-47439179 | None:intergenic | 25.0% |
| ! | AATAAAGAAAGGTGAAAAAG+TGG | + | chr4_4:47439161-47439180 | None:intergenic | 25.0% |
| ! | TTATAACAACAACACTTGTT+AGG | + | chr4_4:47439434-47439453 | None:intergenic | 25.0% |
| !!! | CGTTAATTATGTTTTTTCAC+GGG | - | chr4_4:47439497-47439516 | Msa0684130:CDS | 25.0% |
| ! | CTCGTTGTAGTTATTAAAAT+GGG | + | chr4_4:47439728-47439747 | None:intergenic | 25.0% |
| ! | ACTCGTTGTAGTTATTAAAA+TGG | + | chr4_4:47439729-47439748 | None:intergenic | 25.0% |
| ! | ATAAAATATATGTGGGTGTA+TGG | - | chr4_4:47439823-47439842 | Msa0684130:intron | 25.0% |
| !!! | CTCACTATATGTTTTTATAC+GGG | - | chr4_4:47440453-47440472 | Msa0684130:intron | 25.0% |
| ! | CTCGTTATAGTTACTAAAAT+GGG | + | chr4_4:47440660-47440679 | None:intergenic | 25.0% |
| ! | ACTCGTTATAGTTACTAAAA+TGG | + | chr4_4:47440661-47440680 | None:intergenic | 25.0% |
| !!! | TGAGTATATGTTTGTTTTAC+GGG | - | chr4_4:47440826-47440845 | Msa0684130:intron | 25.0% |
| !!! | ATCTCACTGTATTTTTTTAC+GGG | - | chr4_4:47440945-47440964 | Msa0684130:intron | 25.0% |
| ! | TGCTAAGTAAAAAAAATGAG+GGG | + | chr4_4:47441719-47441738 | None:intergenic | 25.0% |
| ! | CATGCTAAGTAAAAAAAATG+AGG | + | chr4_4:47441721-47441740 | None:intergenic | 25.0% |
| !! | TATCGAAAACAATTTTGTCA+TGG | - | chr4_4:47441821-47441840 | Msa0684130:intron | 25.0% |
| ! | TGTTACTAAATGAATCATGA+TGG | - | chr4_4:47441891-47441910 | Msa0684130:intron | 25.0% |
| ! | AATTTGAAAAGAAGAATTGG+AGG | - | chr4_4:47441950-47441969 | Msa0684130:intron | 25.0% |
| ! | ATTTGAAAAGAAGAATTGGA+GGG | - | chr4_4:47441951-47441970 | Msa0684130:intron | 25.0% |
| ! | TTCCAATATATTGATCAGAA+CGG | - | chr4_4:47442081-47442100 | Msa0684130:intron | 25.0% |
| ! | AAGATATTATGACAATTTGC+AGG | - | chr4_4:47442383-47442402 | Msa0684130:intron | 25.0% |
| ! | ATCATCATCTTTGTATATCA+TGG | + | chr4_4:47442680-47442699 | None:intergenic | 25.0% |
| ! | TTTCTGTTGTTGAATTAAAG+GGG | + | chr4_4:47442864-47442883 | None:intergenic | 25.0% |
| ! | CATTTCTGTTGTTGAATTAA+AGG | + | chr4_4:47442866-47442885 | None:intergenic | 25.0% |
| ! | CTTACACAATGTATAAATAG+AGG | + | chr4_4:47443068-47443087 | None:intergenic | 25.0% |
| ! | CTCTATTTATACATTGTGTA+AGG | - | chr4_4:47443066-47443085 | Msa0684130:five_prime_UTR | 25.0% |
| !!! | CTCTTTTTTTCTATCCTTTG+AGG | - | chr4_4:47438861-47438880 | Msa0684130:three_prime_UTR | 30.0% |
| !!! | TTTTTTCTATCCTTTGAGGA+AGG | - | chr4_4:47438865-47438884 | Msa0684130:three_prime_UTR | 30.0% |
| ATGTTTATTTCCTTCCTCAA+AGG | + | chr4_4:47438878-47438897 | None:intergenic | 30.0% | |
| !! | AGTAAAGTGAGTTTTGATAG+TGG | + | chr4_4:47439085-47439104 | None:intergenic | 30.0% |
| TGGTAAGAAAAAGATAAGAG+AGG | + | chr4_4:47439316-47439335 | None:intergenic | 30.0% | |
| TAATAAAACCTAGGCAATCA+TGG | + | chr4_4:47439795-47439814 | None:intergenic | 30.0% | |
| CTCGTTGTAGTTACTAAAAT+GGG | + | chr4_4:47440191-47440210 | None:intergenic | 30.0% | |
| ACTCGTTGTAGTTACTAAAA+TGG | + | chr4_4:47440192-47440211 | None:intergenic | 30.0% | |
| TGTATCAATAAAAAACCCGT+TGG | - | chr4_4:47440612-47440631 | Msa0684130:intron | 30.0% | |
| ATAAAGTATATGTGGGTGTA+TGG | - | chr4_4:47440779-47440798 | Msa0684130:intron | 30.0% | |
| ATATCCAAAACTATAGCTCT+AGG | - | chr4_4:47441521-47441540 | Msa0684130:intron | 30.0% | |
| ! | AAATCCTAGAGCTATAGTTT+TGG | + | chr4_4:47441528-47441547 | None:intergenic | 30.0% |
| ! | TCTTTGAAGAATGATAGAAG+AGG | - | chr4_4:47441572-47441591 | Msa0684130:intron | 30.0% |
| ! | CTTTTGAGCTAGATGATTAT+AGG | - | chr4_4:47441655-47441674 | Msa0684130:intron | 30.0% |
| GCTAAGTAAAAAAAATGAGG+GGG | + | chr4_4:47441718-47441737 | None:intergenic | 30.0% | |
| ! | GCAATTTAAAACCTTGGAAA+TGG | + | chr4_4:47441748-47441767 | None:intergenic | 30.0% |
| GCAATCAAATTCGATATATG+TGG | - | chr4_4:47441785-47441804 | Msa0684130:intron | 30.0% | |
| TAGTAACAAAGAAGTGATCA+CGG | + | chr4_4:47441879-47441898 | None:intergenic | 30.0% | |
| TCCAATATATTGATCAGAAC+GGG | - | chr4_4:47442082-47442101 | Msa0684130:intron | 30.0% | |
| GTGATTAATGTGTTTCGATT+AGG | - | chr4_4:47442163-47442182 | Msa0684130:intron | 30.0% | |
| AGAGAGAGTAATGAAACTAT+TGG | - | chr4_4:47442438-47442457 | Msa0684130:intron | 30.0% | |
| GTAATGAAACTATTGGAAGA+AGG | - | chr4_4:47442445-47442464 | Msa0684130:intron | 30.0% | |
| AAGAAAGAAACCAATGTAGA+AGG | - | chr4_4:47442482-47442501 | Msa0684130:intron | 30.0% | |
| TAATTCATCTTTCTCAACCT+TGG | - | chr4_4:47442642-47442661 | Msa0684130:intron | 30.0% | |
| AATTCATCTTTCTCAACCTT+GGG | - | chr4_4:47442643-47442662 | Msa0684130:intron | 30.0% | |
| AAGAAAATATGGAACCTAGT+AGG | - | chr4_4:47442743-47442762 | Msa0684130:intron | 30.0% | |
| AGAAAATATGGAACCTAGTA+GGG | - | chr4_4:47442744-47442763 | Msa0684130:intron | 30.0% | |
| TGTACATGAAATCATGTATG+TGG | - | chr4_4:47442984-47443003 | Msa0684130:CDS | 30.0% | |
| AATAGAGGTTTACATAGAGA+GGG | + | chr4_4:47443053-47443072 | None:intergenic | 30.0% | |
| AAATAGAGGTTTACATAGAG+AGG | + | chr4_4:47443054-47443073 | None:intergenic | 30.0% | |
| ATTTAACACCATGATTGCCT+AGG | - | chr4_4:47439784-47439803 | Msa0684130:intron | 35.0% | |
| TGGAGTGTACAATTGTAACA+CGG | - | chr4_4:47440163-47440182 | Msa0684130:intron | 35.0% | |
| TAATAAAACATAGGCAGTCG+CGG | + | chr4_4:47440258-47440277 | None:intergenic | 35.0% | |
| TTACAATTGTACACTCCAAC+GGG | + | chr4_4:47440630-47440649 | None:intergenic | 35.0% | |
| GTTACAATTGTACACTCCAA+CGG | + | chr4_4:47440162-47440181 | None:intergenic | 35.0% | |
| TGGAGTGTACAATTGTAACA+TGG | - | chr4_4:47440163-47440182 | Msa0684130:intron | 35.0% | |
| GGAGTGTACAATTGTAACAT+GGG | - | chr4_4:47440633-47440652 | Msa0684130:intron | 35.0% | |
| TAATAAAACTTAGGCAGTCG+CGG | + | chr4_4:47440753-47440772 | None:intergenic | 35.0% | |
| ! | CAGTCTTGATTTTCTCTTTG+AGG | + | chr4_4:47441379-47441398 | None:intergenic | 35.0% |
| ATGATAGAAGAGGCAACTAA+TGG | - | chr4_4:47441582-47441601 | Msa0684130:intron | 35.0% | |
| AACCCTCAGATCAATTTCAA+AGG | - | chr4_4:47441629-47441648 | Msa0684130:intron | 35.0% | |
| !! | AGCCTTTGAAATTGATCTGA+GGG | + | chr4_4:47441634-47441653 | None:intergenic | 35.0% |
| TTGAGCTAGATGATTATAGG+AGG | - | chr4_4:47441658-47441677 | Msa0684130:intron | 35.0% | |
| !!! | GTGATCACGGTTTTAAATGA+AGG | + | chr4_4:47441866-47441885 | None:intergenic | 35.0% |
| CACAATCAAGGAATTGTAAG+AGG | + | chr4_4:47441977-47441996 | None:intergenic | 35.0% | |
| TATATTGGAAACCTTTCAGC+TGG | + | chr4_4:47442071-47442090 | None:intergenic | 35.0% | |
| ACCCGTTCTGATCAATATAT+TGG | + | chr4_4:47442086-47442105 | None:intergenic | 35.0% | |
| ! | GAATTTCTTCCAGTTGATAC+TGG | - | chr4_4:47442345-47442364 | Msa0684130:intron | 35.0% |
| TGACAATTTGCAGGTTCAAT+TGG | - | chr4_4:47442392-47442411 | Msa0684130:intron | 35.0% | |
| GACAATTTGCAGGTTCAATT+GGG | - | chr4_4:47442393-47442412 | Msa0684130:intron | 35.0% | |
| ACAATTTGCAGGTTCAATTG+GGG | - | chr4_4:47442394-47442413 | Msa0684130:intron | 35.0% | |
| CTGATTTCTTTCTCACAGTT+AGG | + | chr4_4:47442420-47442439 | None:intergenic | 35.0% | |
| ! | CTCTTGATAACCTTCTACAT+TGG | + | chr4_4:47442495-47442514 | None:intergenic | 35.0% |
| CAATGTAGAAGGTTATCAAG+AGG | - | chr4_4:47442493-47442512 | Msa0684130:intron | 35.0% | |
| !! | AGGTTATCAAGAGGTATTCA+AGG | - | chr4_4:47442502-47442521 | Msa0684130:intron | 35.0% |
| !! | TCAAGAGGTATTCAAGGTTT+CGG | - | chr4_4:47442508-47442527 | Msa0684130:intron | 35.0% |
| AAATCATTGCCAACCACATT+CGG | - | chr4_4:47442577-47442596 | Msa0684130:intron | 35.0% | |
| TGAATTACATCTACCGAATG+TGG | + | chr4_4:47442593-47442612 | None:intergenic | 35.0% | |
| ! | CATGGTTTTCATATTACCCA+AGG | + | chr4_4:47442662-47442681 | None:intergenic | 35.0% |
| !! | TCAGAATCACTTTTGGATTG+CGG | - | chr4_4:47442790-47442809 | Msa0684130:intron | 35.0% |
| CTAGAGATGGAATACTACAA+GGG | - | chr4_4:47442911-47442930 | Msa0684130:intron | 35.0% | |
| TGTATCCCTAAAAAACCCGT+TGG | - | chr4_4:47439680-47439699 | Msa0684130:intron | 40.0% | |
| !!! | ACACTCCAACGGGTTTTTTA+GGG | + | chr4_4:47439688-47439707 | None:intergenic | 40.0% |
| !!! | TACACTCCAACGGGTTTTTT+AGG | + | chr4_4:47439689-47439708 | None:intergenic | 40.0% |
| TTGCAATTGTACACTCCAAC+GGG | + | chr4_4:47439698-47439717 | None:intergenic | 40.0% | |
| GTTGCAATTGTACACTCCAA+CGG | + | chr4_4:47439699-47439718 | None:intergenic | 40.0% | |
| GGAGTGTACAATTGTAACAC+GGG | - | chr4_4:47440164-47440183 | Msa0684130:intron | 40.0% | |
| AGGCAACTAATGGAAATCCA+TGG | - | chr4_4:47441592-47441611 | Msa0684130:intron | 40.0% | |
| GGCAACTAATGGAAATCCAT+GGG | - | chr4_4:47441593-47441612 | Msa0684130:intron | 40.0% | |
| !! | CAGCCTTTGAAATTGATCTG+AGG | + | chr4_4:47441635-47441654 | None:intergenic | 40.0% |
| TAGCATGTTCACCATTTCCA+AGG | - | chr4_4:47441734-47441753 | Msa0684130:intron | 40.0% | |
| ! | GCGATCGCAATTTAAAACCT+TGG | + | chr4_4:47441754-47441773 | None:intergenic | 40.0% |
| CAAATGCTCAAGCACAATCA+AGG | + | chr4_4:47441989-47442008 | None:intergenic | 40.0% | |
| !! | CTTGAGCATTTGTTGACTCA+TGG | - | chr4_4:47441997-47442016 | Msa0684130:intron | 40.0% |
| AATTCCTCTGCTACACTTTC+TGG | + | chr4_4:47442024-47442043 | None:intergenic | 40.0% | |
| GATGTTATTGACCAGCTGAA+AGG | - | chr4_4:47442057-47442076 | Msa0684130:intron | 40.0% | |
| GTGAAAAGGACCTGATAATC+TGG | + | chr4_4:47442271-47442290 | None:intergenic | 40.0% | |
| ! | AGGTCCTTTTCACCTAGTAA+AGG | - | chr4_4:47442278-47442297 | Msa0684130:intron | 40.0% |
| ! | TCCTTTTCACCTAGTAAAGG+AGG | - | chr4_4:47442281-47442300 | Msa0684130:intron | 40.0% |
| ! | CCTTTTCACCTAGTAAAGGA+GGG | - | chr4_4:47442282-47442301 | Msa0684130:intron | 40.0% |
| !! | GGTTTTAACCCTCCTTTACT+AGG | + | chr4_4:47442293-47442312 | None:intergenic | 40.0% |
| GGAAGAAGGAAATCTTCTCA+AGG | - | chr4_4:47442459-47442478 | Msa0684130:intron | 40.0% | |
| CAATGATTTCTCGCGAAGAA+TGG | + | chr4_4:47442566-47442585 | None:intergenic | 40.0% | |
| TTACATCTACCGAATGTGGT+TGG | + | chr4_4:47442589-47442608 | None:intergenic | 40.0% | |
| CTCAAACAACTACGAAGATC+AGG | - | chr4_4:47442615-47442634 | Msa0684130:intron | 40.0% | |
| AAATATGGAACCTAGTAGGG+AGG | - | chr4_4:47442747-47442766 | Msa0684130:intron | 40.0% | |
| ! | TGGAGAGTCAGAATCACTTT+TGG | - | chr4_4:47442783-47442802 | Msa0684130:intron | 40.0% |
| AAGACGATTCTTCTAGGCTT+GGG | - | chr4_4:47442815-47442834 | Msa0684130:intron | 40.0% | |
| GCTAGAGATGGAATACTACA+AGG | - | chr4_4:47442910-47442929 | Msa0684130:intron | 40.0% | |
| !!! | AGGGGTGCTCATTTTGCTAT+TGG | + | chr4_4:47438925-47438944 | None:intergenic | 45.0% |
| TAACAAGCTCACAGTTCTGC+AGG | + | chr4_4:47441428-47441447 | None:intergenic | 45.0% | |
| GATCTGAGGGTTACAGTAGT+TGG | + | chr4_4:47441621-47441640 | None:intergenic | 45.0% | |
| CGACCAAACTCCAGATTATC+AGG | - | chr4_4:47442258-47442277 | Msa0684130:intron | 45.0% | |
| ! | GGACCTGATAATCTGGAGTT+TGG | + | chr4_4:47442264-47442283 | None:intergenic | 45.0% |
| CCCTCCTTTACTAGGTGAAA+AGG | + | chr4_4:47442285-47442304 | None:intergenic | 45.0% | |
| GAAGACGATTCTTCTAGGCT+TGG | - | chr4_4:47442814-47442833 | Msa0684130:intron | 45.0% | |
| TCCTTGCTTTCTGCTAGAGA+TGG | - | chr4_4:47442898-47442917 | Msa0684130:intron | 45.0% | |
| TCCATCTCTAGCAGAAAGCA+AGG | + | chr4_4:47442902-47442921 | None:intergenic | 45.0% | |
| TTGGTAGAACCTCCCTTCAA+TGG | - | chr4_4:47443026-47443045 | Msa0684130:five_prime_UTR | 45.0% | |
| CATAGAGAGGGACCATTGAA+GGG | + | chr4_4:47443041-47443060 | None:intergenic | 45.0% | |
| ACATAGAGAGGGACCATTGA+AGG | + | chr4_4:47443042-47443061 | None:intergenic | 45.0% | |
| !!! | TTTTATTATTAAATAAAGAT+AGG | + | chr4_4:47439124-47439143 | None:intergenic | 5.0% |
| !! | ATATATTAATAAAATATATG+TGG | - | chr4_4:47439815-47439834 | Msa0684130:intron | 5.0% |
| !! | TATATTAATAAAATATATGT+GGG | - | chr4_4:47439816-47439835 | Msa0684130:intron | 5.0% |
| !! | TATTAATATTAATAAAACTT+AGG | + | chr4_4:47440762-47440781 | None:intergenic | 5.0% |
| !!! | TATGATTATTTTTATTTATT+AGG | - | chr4_4:47439567-47439586 | Msa0684130:intron | 5.0% |
| ! | GTTACAGTAGTTGGTGCCCA+TGG | + | chr4_4:47441612-47441631 | None:intergenic | 50.0% |
| ! | TGGACCAGAAAGTGTAGCAG+AGG | - | chr4_4:47442017-47442036 | Msa0684130:intron | 50.0% |
| CTTGCAGCACCAGTATCAAC+TGG | + | chr4_4:47442357-47442376 | None:intergenic | 50.0% | |
| ! | TCGCGAAGAATGGCTTGTGT+TGG | + | chr4_4:47442556-47442575 | None:intergenic | 50.0% |
| AAGTTCCACACCTCCCTACT+AGG | + | chr4_4:47442760-47442779 | None:intergenic | 50.0% | |
| ! | TAGTAGGGAGGTGTGGAACT+TGG | - | chr4_4:47442759-47442778 | Msa0684130:intron | 50.0% |
| GCGGAGAAGACGATTCTTCT+AGG | - | chr4_4:47442809-47442828 | Msa0684130:intron | 50.0% | |
| ACGATTCTTCTAGGCTTGGG+AGG | - | chr4_4:47442818-47442837 | Msa0684130:intron | 50.0% | |
| AGATACCCGTGCTACAGCAC+GGG | + | chr4_4:47441344-47441363 | None:intergenic | 55.0% | |
| GAGATACCCGTGCTACAGCA+CGG | + | chr4_4:47441345-47441364 | None:intergenic | 55.0% | |
| AAGGTCTGCGAGCGCAATCT+AGG | + | chr4_4:47441847-47441866 | None:intergenic | 55.0% | |
| TGGAACCTAGTAGGGAGGTG+TGG | - | chr4_4:47442752-47442771 | Msa0684130:intron | 55.0% | |
| ! | AGGGAGGTGTGGAACTTGGA+TGG | - | chr4_4:47442763-47442782 | Msa0684130:intron | 55.0% |
| AGAGAGGGACCATTGAAGGG+AGG | + | chr4_4:47443038-47443057 | None:intergenic | 55.0% | |
| CGTCGCGTCTCGGATGCACT+TGG | + | chr4_4:47441279-47441298 | None:intergenic | 65.0% | |
| GTGCTACAGCACGGGTAGCG+CGG | + | chr4_4:47441336-47441355 | None:intergenic | 65.0% | |
| GCGCTACCCGTGCTGTAGCA+CGG | - | chr4_4:47441335-47441354 | Msa0684130:intron | 65.0% | |
| CGCTACCCGTGCTGTAGCAC+GGG | - | chr4_4:47441336-47441355 | Msa0684130:intron | 65.0% | |
| TGCATCCGAGACGCGACGCG+CGG | - | chr4_4:47441281-47441300 | Msa0684130:intron | 70.0% | |
| TTCGCCGCGCTGTATGGCCG+CGG | + | chr4_4:47441312-47441331 | None:intergenic | 70.0% | |
| ATCCGAGACGCGACGCGCGG+CGG | - | chr4_4:47441284-47441303 | Msa0684130:intron | 75.0% | |
| GGAGCCGCGGCCATACAGCG+CGG | - | chr4_4:47441305-47441324 | Msa0684130:intron | 75.0% | |
| CGCGGCTTCGCCGCGCTGTA+TGG | + | chr4_4:47441318-47441337 | None:intergenic | 75.0% | |
| ! | CTCCGCCGCGCGTCGCGTCT+CGG | + | chr4_4:47441289-47441308 | None:intergenic | 80.0% |
| ! | CGCGACGCGCGGCGGAGCCG+CGG | - | chr4_4:47441292-47441311 | Msa0684130:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 47438853 | 47443102 | 47438853 | ID=Msa0684130;Name=Msa0684130 |
| chr4_4 | mRNA | 47438853 | 47443102 | 47438853 | ID=Msa0684130-mRNA-1;Parent=Msa0684130;Name=Msa0684130-mRNA-1;_AED=0.13;_eAED=0.13;_QI=80|0.66|1|1|0.33|0.5|4|163|253 |
| chr4_4 | exon | 47438853 | 47439550 | 47438853 | ID=Msa0684130-mRNA-1:exon:11682;Parent=Msa0684130-mRNA-1 |
| chr4_4 | exon | 47440252 | 47440374 | 47440252 | ID=Msa0684130-mRNA-1:exon:11681;Parent=Msa0684130-mRNA-1 |
| chr4_4 | exon | 47440520 | 47440584 | 47440520 | ID=Msa0684130-mRNA-1:exon:11680;Parent=Msa0684130-mRNA-1 |
| chr4_4 | exon | 47442984 | 47443102 | 47442984 | ID=Msa0684130-mRNA-1:exon:11679;Parent=Msa0684130-mRNA-1 |
| chr4_4 | five_prime_UTR | 47443023 | 47443102 | 47443023 | ID=Msa0684130-mRNA-1:five_prime_utr;Parent=Msa0684130-mRNA-1 |
| chr4_4 | CDS | 47442984 | 47443022 | 47442984 | ID=Msa0684130-mRNA-1:cds;Parent=Msa0684130-mRNA-1 |
| chr4_4 | CDS | 47440520 | 47440584 | 47440520 | ID=Msa0684130-mRNA-1:cds;Parent=Msa0684130-mRNA-1 |
| chr4_4 | CDS | 47440252 | 47440374 | 47440252 | ID=Msa0684130-mRNA-1:cds;Parent=Msa0684130-mRNA-1 |
| chr4_4 | CDS | 47439016 | 47439550 | 47439016 | ID=Msa0684130-mRNA-1:cds;Parent=Msa0684130-mRNA-1 |
| chr4_4 | three_prime_UTR | 47438853 | 47439015 | 47438853 | ID=Msa0684130-mRNA-1:three_prime_utr;Parent=Msa0684130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
