Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229100 | XP_024635738.1 | 89.809 | 157 | 6 | 1 | 1 | 147 | 24 | 180 | 5.51e-98 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229100 | sp|F4KEV7|FHIT_ARATH | 59.333 | 150 | 51 | 1 | 6 | 145 | 28 | 177 | 8.98e-59 | 183 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229100 | A0A072UY82 | 87.578 | 161 | 6 | 1 | 1 | 147 | 1 | 161 | 7.17e-98 | 288 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0229100 | -0.821731 | 3.455170e-53 | -8.615850e-47 |
| Msa0011010 | Msa0229100 | 0.811573 | 6.544626e-51 | -8.615850e-47 |
| Msa0011040 | Msa0229100 | 0.800331 | 1.515432e-48 | -8.615850e-47 |
| Msa0011410 | Msa0229100 | -0.814876 | 1.232170e-51 | -8.615850e-47 |
| Msa0011440 | Msa0229100 | -0.807833 | 4.166538e-50 | -8.615850e-47 |
| Msa0017710 | Msa0229100 | 0.805855 | 1.090998e-49 | -8.615850e-47 |
| Msa0025570 | Msa0229100 | 0.810311 | 1.227940e-50 | -8.615850e-47 |
| Msa0027020 | Msa0229100 | -0.827159 | 1.824625e-54 | -8.615850e-47 |
| Msa0033190 | Msa0229100 | -0.803153 | 3.993873e-49 | -8.615850e-47 |
| Msa0037270 | Msa0229100 | -0.801802 | 7.580200e-49 | -8.615850e-47 |
| Msa0038750 | Msa0229100 | -0.803126 | 4.045876e-49 | -8.615850e-47 |
| Msa0046020 | Msa0229100 | -0.815306 | 9.889746e-52 | -8.615850e-47 |
| Msa0047660 | Msa0229100 | -0.809222 | 2.105262e-50 | -8.615850e-47 |
| Msa0048380 | Msa0229100 | 0.802889 | 4.528927e-49 | -8.615850e-47 |
| Msa0060410 | Msa0229100 | 0.808919 | 2.444910e-50 | -8.615850e-47 |
| Msa0069590 | Msa0229100 | -0.803707 | 3.066311e-49 | -8.615850e-47 |
| Msa0075080 | Msa0229100 | -0.806607 | 7.575741e-50 | -8.615850e-47 |
| Msa0075820 | Msa0229100 | -0.814050 | 1.876607e-51 | -8.615850e-47 |
| Msa0076590 | Msa0229100 | -0.802471 | 5.522754e-49 | -8.615850e-47 |
| Msa0079840 | Msa0229100 | -0.804415 | 2.183927e-49 | -8.615850e-47 |
| Msa0080100 | Msa0229100 | -0.817943 | 2.536972e-52 | -8.615850e-47 |
| Msa0090650 | Msa0229100 | 0.808864 | 2.511779e-50 | -8.615850e-47 |
| Msa0093360 | Msa0229100 | -0.815581 | 8.591355e-52 | -8.615850e-47 |
| Msa0105140 | Msa0229100 | -0.823323 | 1.473416e-53 | -8.615850e-47 |
| Msa0107830 | Msa0229100 | 0.807900 | 4.032957e-50 | -8.615850e-47 |
| Msa0121320 | Msa0229100 | 0.805160 | 1.526599e-49 | -8.615850e-47 |
| Msa0122170 | Msa0229100 | -0.802161 | 6.396739e-49 | -8.615850e-47 |
| Msa0122930 | Msa0229100 | -0.816146 | 6.428528e-52 | -8.615850e-47 |
| Msa0124460 | Msa0229100 | -0.824579 | 7.478087e-54 | -8.615850e-47 |
| Msa0127110 | Msa0229100 | -0.802260 | 6.103888e-49 | -8.615850e-47 |
| Msa0141410 | Msa0229100 | 0.808152 | 3.564042e-50 | -8.615850e-47 |
| Msa0145990 | Msa0229100 | -0.801915 | 7.187627e-49 | -8.615850e-47 |
| Msa0151380 | Msa0229100 | -0.808580 | 2.888814e-50 | -8.615850e-47 |
| Msa0161230 | Msa0229100 | 0.811148 | 8.091466e-51 | -8.615850e-47 |
| Msa0163690 | Msa0229100 | 0.808159 | 3.551578e-50 | -8.615850e-47 |
| Msa0167160 | Msa0229100 | -0.822832 | 1.917722e-53 | -8.615850e-47 |
| Msa0167570 | Msa0229100 | -0.822920 | 1.829290e-53 | -8.615850e-47 |
| Msa0168950 | Msa0229100 | -0.805392 | 1.364962e-49 | -8.615850e-47 |
| Msa0185040 | Msa0229100 | 0.802081 | 6.643947e-49 | -8.615850e-47 |
| Msa0186240 | Msa0229100 | 0.806397 | 8.392496e-50 | -8.615850e-47 |
| Msa0198280 | Msa0229100 | -0.804759 | 1.851111e-49 | -8.615850e-47 |
| Msa0212950 | Msa0229100 | -0.816410 | 5.611611e-52 | -8.615850e-47 |
| Msa0225280 | Msa0229100 | -0.816881 | 4.398983e-52 | -8.615850e-47 |
| Msa0229100 | Msa0231180 | -0.805717 | 1.166646e-49 | -8.615850e-47 |
| Msa0229100 | Msa0234150 | 0.800892 | 1.164565e-48 | -8.615850e-47 |
| Msa0229100 | Msa0241750 | 0.800352 | 1.500237e-48 | -8.615850e-47 |
| Msa0229100 | Msa0253230 | -0.823174 | 1.596350e-53 | -8.615850e-47 |
| Msa0229100 | Msa0255770 | -0.817045 | 4.042714e-52 | -8.615850e-47 |
| Msa0229100 | Msa0261020 | -0.800627 | 1.318630e-48 | -8.615850e-47 |
| Msa0229100 | Msa0261350 | -0.813989 | 1.935294e-51 | -8.615850e-47 |
| Msa0229100 | Msa0262350 | -0.802867 | 4.575164e-49 | -8.615850e-47 |
| Msa0229100 | Msa0266330 | -0.827114 | 1.870279e-54 | -8.615850e-47 |
| Msa0229100 | Msa0275730 | 0.814813 | 1.272391e-51 | -8.615850e-47 |
| Msa0229100 | Msa0276780 | 0.807126 | 5.885332e-50 | -8.615850e-47 |
| Msa0229100 | Msa0279810 | 0.811262 | 7.645972e-51 | -8.615850e-47 |
| Msa0229100 | Msa0287480 | 0.802938 | 4.424443e-49 | -8.615850e-47 |
| Msa0229100 | Msa0293060 | -0.802905 | 4.494795e-49 | -8.615850e-47 |
| Msa0229100 | Msa0298820 | -0.838518 | 2.742940e-57 | -8.615850e-47 |
| Msa0229100 | Msa0299130 | -0.818256 | 2.155046e-52 | -8.615850e-47 |
| Msa0229100 | Msa0300130 | -0.814636 | 1.392627e-51 | -8.615850e-47 |
| Msa0229100 | Msa0307630 | 0.811822 | 5.776742e-51 | -8.615850e-47 |
| Msa0229100 | Msa0310190 | 0.804253 | 2.360477e-49 | -8.615850e-47 |
| Msa0229100 | Msa0310270 | -0.813530 | 2.443450e-51 | -8.615850e-47 |
| Msa0229100 | Msa0317820 | -0.802421 | 5.656132e-49 | -8.615850e-47 |
| Msa0229100 | Msa0319220 | 0.821001 | 5.092621e-53 | -8.615850e-47 |
| Msa0229100 | Msa0329050 | -0.806637 | 7.467812e-50 | -8.615850e-47 |
| Msa0229100 | Msa0340700 | -0.811104 | 8.272538e-51 | -8.615850e-47 |
| Msa0229100 | Msa0341950 | -0.827179 | 1.804410e-54 | -8.615850e-47 |
| Msa0229100 | Msa0354600 | 0.828745 | 7.576687e-55 | -8.615850e-47 |
| Msa0229100 | Msa0367600 | -0.807099 | 5.964795e-50 | -8.615850e-47 |
| Msa0229100 | Msa0369080 | -0.804279 | 2.331617e-49 | -8.615850e-47 |
| Msa0229100 | Msa0371010 | -0.802452 | 5.573694e-49 | -8.615850e-47 |
| Msa0229100 | Msa0380470 | -0.802881 | 4.544733e-49 | -8.615850e-47 |
| Msa0229100 | Msa0382050 | -0.802223 | 6.211889e-49 | -8.615850e-47 |
| Msa0229100 | Msa0383960 | 0.800357 | 1.497109e-48 | -8.615850e-47 |
| Msa0229100 | Msa0386230 | -0.835540 | 1.580846e-56 | -8.615850e-47 |
| Msa0229100 | Msa0390200 | 0.804794 | 1.820215e-49 | -8.615850e-47 |
| Msa0229100 | Msa0404710 | -0.813182 | 2.912839e-51 | -8.615850e-47 |
| Msa0229100 | Msa0415100 | 0.827144 | 1.839896e-54 | -8.615850e-47 |
| Msa0229100 | Msa0415210 | -0.802814 | 4.692062e-49 | -8.615850e-47 |
| Msa0229100 | Msa0416430 | -0.816235 | 6.140710e-52 | -8.615850e-47 |
| Msa0229100 | Msa0419150 | -0.817987 | 2.479970e-52 | -8.615850e-47 |
| Msa0229100 | Msa0428270 | -0.800997 | 1.108195e-48 | -8.615850e-47 |
| Msa0229100 | Msa0428300 | -0.808537 | 2.950455e-50 | -8.615850e-47 |
| Msa0229100 | Msa0428720 | -0.811335 | 7.372539e-51 | -8.615850e-47 |
| Msa0229100 | Msa0429990 | -0.805702 | 1.175248e-49 | -8.615850e-47 |
| Msa0229100 | Msa0431550 | -0.805952 | 1.040969e-49 | -8.615850e-47 |
| Msa0229100 | Msa0434460 | 0.815884 | 7.353218e-52 | -8.615850e-47 |
| Msa0229100 | Msa0436660 | -0.811760 | 5.960187e-51 | -8.615850e-47 |
| Msa0229100 | Msa0437820 | -0.811368 | 7.250579e-51 | -8.615850e-47 |
| Msa0229100 | Msa0439090 | -0.817214 | 3.704107e-52 | -8.615850e-47 |
| Msa0229100 | Msa0444770 | -0.806737 | 7.114112e-50 | -8.615850e-47 |
| Msa0229100 | Msa0457600 | -0.804889 | 1.739134e-49 | -8.615850e-47 |
| Msa0229100 | Msa0462530 | -0.801664 | 8.094580e-49 | -8.615850e-47 |
| Msa0229100 | Msa0463030 | -0.812956 | 3.266195e-51 | -8.615850e-47 |
| Msa0229100 | Msa0464980 | -0.818888 | 1.549622e-52 | -8.615850e-47 |
| Msa0229100 | Msa0469770 | -0.807975 | 3.886908e-50 | -8.615850e-47 |
| Msa0229100 | Msa0473740 | -0.802520 | 5.396162e-49 | -8.615850e-47 |
| Msa0229100 | Msa0474660 | -0.820120 | 8.112751e-53 | -8.615850e-47 |
| Msa0229100 | Msa0484590 | -0.802821 | 4.677994e-49 | -8.615850e-47 |
| Msa0229100 | Msa0492330 | -0.814969 | 1.175114e-51 | -8.615850e-47 |
| Msa0229100 | Msa0500580 | -0.808925 | 2.437012e-50 | -8.615850e-47 |
| Msa0229100 | Msa0506700 | -0.823280 | 1.508357e-53 | -8.615850e-47 |
| Msa0229100 | Msa0508620 | -0.807371 | 5.221483e-50 | -8.615850e-47 |
| Msa0229100 | Msa0508660 | -0.800690 | 1.280226e-48 | -8.615850e-47 |
| Msa0229100 | Msa0519070 | -0.809898 | 1.506718e-50 | -8.615850e-47 |
| Msa0229100 | Msa0522170 | 0.806270 | 8.922866e-50 | -8.615850e-47 |
| Msa0229100 | Msa0524710 | 0.808547 | 2.935277e-50 | -8.615850e-47 |
| Msa0229100 | Msa0525180 | -0.813112 | 3.018372e-51 | -8.615850e-47 |
| Msa0229100 | Msa0548260 | -0.808801 | 2.591120e-50 | -8.615850e-47 |
| Msa0229100 | Msa0549700 | -0.802279 | 6.048574e-49 | -8.615850e-47 |
| Msa0229100 | Msa0550980 | -0.807918 | 3.997410e-50 | -8.615850e-47 |
| Msa0229100 | Msa0550990 | -0.807746 | 4.348103e-50 | -8.615850e-47 |
| Msa0229100 | Msa0555210 | -0.800376 | 1.483836e-48 | -8.615850e-47 |
| Msa0229100 | Msa0557440 | -0.812910 | 3.342002e-51 | -8.615850e-47 |
| Msa0229100 | Msa0560950 | 0.818730 | 1.682989e-52 | -8.615850e-47 |
| Msa0229100 | Msa0561450 | -0.829010 | 6.539408e-55 | -8.615850e-47 |
| Msa0229100 | Msa0567330 | 0.813538 | 2.433312e-51 | -8.615850e-47 |
| Msa0229100 | Msa0567570 | 0.815236 | 1.025430e-51 | -8.615850e-47 |
| Msa0229100 | Msa0576320 | 0.805762 | 1.141621e-49 | -8.615850e-47 |
| Msa0229100 | Msa0580890 | -0.819763 | 9.788993e-53 | -8.615850e-47 |
| Msa0229100 | Msa0583270 | -0.807661 | 4.531749e-50 | -8.615850e-47 |
| Msa0229100 | Msa0597370 | -0.811218 | 7.816094e-51 | -8.615850e-47 |
| Msa0229100 | Msa0603180 | -0.815846 | 7.500493e-52 | -8.615850e-47 |
| Msa0229100 | Msa0605150 | -0.808630 | 2.818592e-50 | -8.615850e-47 |
| Msa0229100 | Msa0605210 | -0.809027 | 2.317868e-50 | -8.615850e-47 |
| Msa0229100 | Msa0606340 | -0.817087 | 3.954689e-52 | -8.615850e-47 |
| Msa0229100 | Msa0606820 | 0.803578 | 3.260910e-49 | -8.615850e-47 |
| Msa0229100 | Msa0608720 | -0.803751 | 3.001618e-49 | -8.615850e-47 |
| Msa0229100 | Msa0615070 | 0.807331 | 5.324644e-50 | -8.615850e-47 |
| Msa0229100 | Msa0615460 | -0.803453 | 3.461575e-49 | -8.615850e-47 |
| Msa0229100 | Msa0616890 | -0.807457 | 5.007004e-50 | -8.615850e-47 |
| Msa0229100 | Msa0622450 | -0.834428 | 3.015219e-56 | -8.615850e-47 |
| Msa0229100 | Msa0628200 | 0.809095 | 2.241331e-50 | -8.615850e-47 |
| Msa0229100 | Msa0629160 | 0.827880 | 1.224879e-54 | -8.615850e-47 |
| Msa0229100 | Msa0637590 | 0.801382 | 9.244779e-49 | -8.615850e-47 |
| Msa0229100 | Msa0643230 | 0.804361 | 2.241441e-49 | -8.615850e-47 |
| Msa0229100 | Msa0644340 | 0.805576 | 1.248824e-49 | -8.615850e-47 |
| Msa0229100 | Msa0646310 | -0.803119 | 4.058496e-49 | -8.615850e-47 |
| Msa0229100 | Msa0654850 | -0.825279 | 5.111619e-54 | -8.615850e-47 |
| Msa0229100 | Msa0666950 | 0.812872 | 3.406791e-51 | -8.615850e-47 |
| Msa0229100 | Msa0676570 | -0.802909 | 4.485352e-49 | -8.615850e-47 |
| Msa0229100 | Msa0684030 | -0.824440 | 8.064076e-54 | -8.615850e-47 |
| Msa0229100 | Msa0690100 | -0.811795 | 5.855575e-51 | -8.615850e-47 |
| Msa0229100 | Msa0695250 | -0.823817 | 1.129198e-53 | -8.615850e-47 |
| Msa0229100 | Msa0699170 | 0.811540 | 6.651358e-51 | -8.615850e-47 |
| Msa0229100 | Msa0701800 | -0.800190 | 1.618759e-48 | -8.615850e-47 |
| Msa0229100 | Msa0713570 | -0.808809 | 2.580667e-50 | -8.615850e-47 |
| Msa0229100 | Msa0729120 | -0.800109 | 1.681711e-48 | -8.615850e-47 |
| Msa0229100 | Msa0729740 | -0.803653 | 3.145986e-49 | -8.615850e-47 |
| Msa0229100 | Msa0745270 | -0.805349 | 1.393714e-49 | -8.615850e-47 |
| Msa0229100 | Msa0750200 | -0.813141 | 2.974838e-51 | -8.615850e-47 |
| Msa0229100 | Msa0753590 | -0.801669 | 8.072876e-49 | -8.615850e-47 |
| Msa0229100 | Msa0755550 | -0.812730 | 3.659516e-51 | -8.615850e-47 |
| Msa0229100 | Msa0758880 | -0.814001 | 1.924153e-51 | -8.615850e-47 |
| Msa0229100 | Msa0786600 | -0.805427 | 1.342085e-49 | -8.615850e-47 |
| Msa0229100 | Msa0790650 | -0.806499 | 7.984510e-50 | -8.615850e-47 |
| Msa0229100 | Msa0792410 | 0.813861 | 2.065772e-51 | -8.615850e-47 |
| Msa0229100 | Msa0792490 | -0.804853 | 1.769197e-49 | -8.615850e-47 |
| Msa0229100 | Msa0793130 | -0.816389 | 5.670355e-52 | -8.615850e-47 |
| Msa0229100 | Msa0794900 | -0.804248 | 2.365754e-49 | -8.615850e-47 |
| Msa0229100 | Msa0801920 | -0.816365 | 5.740903e-52 | -8.615850e-47 |
| Msa0229100 | Msa0802600 | 0.863542 | 2.311463e-64 | -8.615850e-47 |
| Msa0229100 | Msa0803880 | 0.814819 | 1.268642e-51 | -8.615850e-47 |
| Msa0229100 | Msa0820130 | -0.801902 | 7.230908e-49 | -8.615850e-47 |
| Msa0229100 | Msa0822680 | -0.801610 | 8.300087e-49 | -8.615850e-47 |
| Msa0229100 | Msa0826820 | -0.801396 | 9.185105e-49 | -8.615850e-47 |
| Msa0229100 | Msa0829250 | -0.826762 | 2.270646e-54 | -8.615850e-47 |
| Msa0229100 | Msa0835050 | -0.806417 | 8.309282e-50 | -8.615850e-47 |
| Msa0229100 | Msa0838120 | -0.818473 | 1.924825e-52 | -8.615850e-47 |
| Msa0229100 | Msa0841520 | 0.807346 | 5.286875e-50 | -8.615850e-47 |
| Msa0229100 | Msa0865500 | -0.802020 | 6.839907e-49 | -8.615850e-47 |
| Msa0229100 | Msa0866310 | -0.803363 | 3.612899e-49 | -8.615850e-47 |
| Msa0229100 | Msa0868500 | -0.828801 | 7.345078e-55 | -8.615850e-47 |
| Msa0229100 | Msa0868510 | -0.831662 | 1.470016e-55 | -8.615850e-47 |
| Msa0229100 | Msa0868520 | -0.824454 | 8.000867e-54 | -8.615850e-47 |
| Msa0229100 | Msa0869420 | -0.803739 | 3.018549e-49 | -8.615850e-47 |
| Msa0229100 | Msa0882480 | -0.819301 | 1.247981e-52 | -8.615850e-47 |
| Msa0229100 | Msa0888520 | -0.800345 | 1.505540e-48 | -8.615850e-47 |
| Msa0229100 | Msa0933320 | -0.800848 | 1.189026e-48 | -8.615850e-47 |
| Msa0229100 | Msa0941150 | -0.802490 | 5.472705e-49 | -8.615850e-47 |
| Msa0229100 | Msa0941410 | -0.817701 | 2.876716e-52 | -8.615850e-47 |
| Msa0229100 | Msa0941420 | -0.826041 | 3.371463e-54 | -8.615850e-47 |
| Msa0229100 | Msa0945160 | -0.825933 | 3.576663e-54 | -8.615850e-47 |
| Msa0229100 | Msa0971690 | -0.812431 | 4.254797e-51 | -8.615850e-47 |
| Msa0229100 | Msa0973010 | -0.805250 | 1.461545e-49 | -8.615850e-47 |
| Msa0229100 | Msa0978540 | -0.824583 | 7.461233e-54 | -8.615850e-47 |
| Msa0229100 | Msa0978550 | -0.831560 | 1.557880e-55 | -8.615850e-47 |
| Msa0229100 | Msa0978560 | -0.824378 | 8.338982e-54 | -8.615850e-47 |
| Msa0229100 | Msa0984230 | -0.800281 | 1.551234e-48 | -8.615850e-47 |
| Msa0229100 | Msa1002550 | -0.836039 | 1.182053e-56 | -8.615850e-47 |
| Msa0229100 | Msa1028890 | -0.818842 | 1.586928e-52 | -8.615850e-47 |
| Msa0229100 | Msa1031190 | -0.820074 | 8.312337e-53 | -8.615850e-47 |
| Msa0229100 | Msa1035050 | 0.845503 | 3.899539e-59 | -8.615850e-47 |
| Msa0229100 | Msa1037440 | -0.800287 | 1.546649e-48 | -8.615850e-47 |
| Msa0229100 | Msa1045750 | -0.805663 | 1.197549e-49 | -8.615850e-47 |
| Msa0229100 | Msa1047390 | -0.808853 | 2.524638e-50 | -8.615850e-47 |
| Msa0229100 | Msa1058550 | -0.840151 | 1.033603e-57 | -8.615850e-47 |
| Msa0229100 | Msa1062060 | 0.820706 | 5.953969e-53 | -8.615850e-47 |
| Msa0229100 | Msa1068010 | -0.836549 | 8.768073e-57 | -8.615850e-47 |
| Msa0229100 | Msa1069250 | 0.801304 | 9.591619e-49 | -8.615850e-47 |
| Msa0229100 | Msa1070370 | -0.820153 | 7.973476e-53 | -8.615850e-47 |
| Msa0229100 | Msa1075090 | 0.843069 | 1.757709e-58 | -8.615850e-47 |
| Msa0229100 | Msa1078120 | -0.816501 | 5.352129e-52 | -8.615850e-47 |
| Msa0229100 | Msa1085820 | 0.801761 | 7.731951e-49 | -8.615850e-47 |
| Msa0229100 | Msa1091400 | -0.812943 | 3.287464e-51 | -8.615850e-47 |
| Msa0229100 | Msa1103450 | 0.803058 | 4.177636e-49 | -8.615850e-47 |
| Msa0229100 | Msa1107220 | 0.802415 | 5.671912e-49 | -8.615850e-47 |
| Msa0229100 | Msa1115980 | 0.837398 | 5.323468e-57 | -8.615850e-47 |
| Msa0229100 | Msa1119420 | -0.818536 | 1.862405e-52 | -8.615850e-47 |
| Msa0229100 | Msa1121720 | -0.802281 | 6.044972e-49 | -8.615850e-47 |
| Msa0229100 | Msa1122710 | -0.801451 | 8.950118e-49 | -8.615850e-47 |
| Msa0229100 | Msa1123260 | -0.800071 | 1.711322e-48 | -8.615850e-47 |
| Msa0229100 | Msa1129510 | -0.803419 | 3.517288e-49 | -8.615850e-47 |
| Msa0229100 | Msa1130150 | -0.847768 | 9.380245e-60 | -8.615850e-47 |
| Msa0229100 | Msa1130850 | -0.802719 | 4.908180e-49 | -8.615850e-47 |
| Msa0229100 | Msa1130910 | -0.800677 | 1.288227e-48 | -8.615850e-47 |
| Msa0229100 | Msa1132250 | -0.805594 | 1.238193e-49 | -8.615850e-47 |
| Msa0229100 | Msa1134800 | -0.815681 | 8.160609e-52 | -8.615850e-47 |
| Msa0229100 | Msa1136760 | 0.818494 | 1.903924e-52 | -8.615850e-47 |
| Msa0229100 | Msa1137750 | 0.807845 | 4.142804e-50 | -8.615850e-47 |
| Msa0229100 | Msa1150760 | 0.800107 | 1.683308e-48 | -8.615850e-47 |
| Msa0229100 | Msa1156100 | -0.840718 | 7.346607e-58 | -8.615850e-47 |
| Msa0229100 | Msa1158180 | -0.817618 | 3.002999e-52 | -8.615850e-47 |
| Msa0229100 | Msa1162430 | 0.813951 | 1.973539e-51 | -8.615850e-47 |
| Msa0229100 | Msa1163130 | -0.804000 | 2.665272e-49 | -8.615850e-47 |
| Msa0229100 | Msa1175340 | -0.815292 | 9.963550e-52 | -8.615850e-47 |
| Msa0229100 | Msa1191270 | 0.800224 | 1.593341e-48 | -8.615850e-47 |
| Msa0229100 | Msa1191530 | -0.802451 | 5.574723e-49 | -8.615850e-47 |
| Msa0229100 | Msa1197740 | -0.803870 | 2.836485e-49 | -8.615850e-47 |
| Msa0229100 | Msa1199700 | -0.802830 | 4.656969e-49 | -8.615850e-47 |
| Msa0229100 | Msa1203320 | -0.826760 | 2.273013e-54 | -8.615850e-47 |
| Msa0229100 | Msa1204870 | -0.806216 | 9.162567e-50 | -8.615850e-47 |
| Msa0229100 | Msa1211610 | 0.801855 | 7.394953e-49 | -8.615850e-47 |
| Msa0229100 | Msa1212150 | -0.813548 | 2.420891e-51 | -8.615850e-47 |
| Msa0229100 | Msa1212210 | -0.809765 | 1.609528e-50 | -8.615850e-47 |
| Msa0229100 | Msa1215540 | -0.823854 | 1.106719e-53 | -8.615850e-47 |
| Msa0229100 | Msa1222900 | -0.812387 | 4.349423e-51 | -8.615850e-47 |
| Msa0229100 | Msa1223540 | 0.818055 | 2.393406e-52 | -8.615850e-47 |
| Msa0229100 | Msa1223620 | 0.801934 | 7.123656e-49 | -8.615850e-47 |
| Msa0229100 | Msa1223960 | 0.817052 | 4.027384e-52 | -8.615850e-47 |
| Msa0229100 | Msa1223990 | 0.815148 | 1.072330e-51 | -8.615850e-47 |
| Msa0229100 | Msa1228260 | -0.805940 | 1.047035e-49 | -8.615850e-47 |
| Msa0229100 | Msa1235620 | -0.813287 | 2.763371e-51 | -8.615850e-47 |
| Msa0229100 | Msa1239190 | 0.814655 | 1.379267e-51 | -8.615850e-47 |
| Msa0229100 | Msa1239210 | 0.818805 | 1.618474e-52 | -8.615850e-47 |
| Msa0229100 | Msa1239940 | 0.817081 | 3.968397e-52 | -8.615850e-47 |
| Msa0229100 | Msa1251440 | -0.800724 | 1.259879e-48 | -8.615850e-47 |
| Msa0229100 | Msa1255030 | -0.807289 | 5.436651e-50 | -8.615850e-47 |
| Msa0229100 | Msa1257860 | -0.803594 | 3.236479e-49 | -8.615850e-47 |
| Msa0229100 | Msa1263110 | 0.808592 | 2.871105e-50 | -8.615850e-47 |
| Msa0229100 | Msa1263520 | 0.802741 | 4.857247e-49 | -8.615850e-47 |
| Msa0229100 | Msa1266750 | -0.809468 | 1.864338e-50 | -8.615850e-47 |
| Msa0229100 | Msa1269200 | 0.803390 | 3.567316e-49 | -8.615850e-47 |
| Msa0229100 | Msa1269730 | -0.821795 | 3.338228e-53 | -8.615850e-47 |
| Msa0229100 | Msa1271220 | -0.804406 | 2.193212e-49 | -8.615850e-47 |
| Msa0229100 | Msa1273320 | 0.808442 | 3.090672e-50 | -8.615850e-47 |
| Msa0229100 | Msa1277270 | -0.812797 | 3.538085e-51 | -8.615850e-47 |
| Msa0229100 | Msa1287100 | -0.817445 | 3.285029e-52 | -8.615850e-47 |
| Msa0229100 | Msa1291070 | -0.801459 | 8.915505e-49 | -8.615850e-47 |
| Msa0229100 | Msa1303690 | -0.819783 | 9.686805e-53 | -8.615850e-47 |
| Msa0229100 | Msa1308430 | -0.800205 | 1.607592e-48 | -8.615850e-47 |
| Msa0229100 | Msa1328430 | 0.800879 | 1.171595e-48 | -8.615850e-47 |
| Msa0229100 | Msa1338810 | -0.804175 | 2.450303e-49 | -8.615850e-47 |
| Msa0229100 | Msa1341710 | -0.821842 | 3.257074e-53 | -8.615850e-47 |
| Msa0229100 | Msa1350130 | -0.818966 | 1.487395e-52 | -8.615850e-47 |
| Msa0229100 | Msa1350590 | -0.809670 | 1.686802e-50 | -8.615850e-47 |
| Msa0229100 | Msa1356100 | -0.801542 | 8.571572e-49 | -8.615850e-47 |
| Msa0229100 | Msa1361580 | -0.805868 | 1.084499e-49 | -8.615850e-47 |
| Msa0229100 | Msa1363170 | -0.821252 | 4.457834e-53 | -8.615850e-47 |
| Msa0229100 | Msa1364690 | 0.810404 | 1.172461e-50 | -8.615850e-47 |
| Msa0229100 | Msa1372460 | -0.818111 | 2.324453e-52 | -8.615850e-47 |
| Msa0229100 | Msa1373420 | -0.818829 | 1.597975e-52 | -8.615850e-47 |
| Msa0229100 | Msa1373930 | -0.805403 | 1.357660e-49 | -8.615850e-47 |
| Msa0229100 | Msa1386910 | -0.813665 | 2.281017e-51 | -8.615850e-47 |
| Msa0229100 | Msa1395380 | -0.805971 | 1.031779e-49 | -8.615850e-47 |
| Msa0229100 | Msa1398140 | 0.822833 | 1.916955e-53 | -8.615850e-47 |
| Msa0229100 | Msa1404810 | -0.812926 | 3.315485e-51 | -8.615850e-47 |
| Msa0229100 | Msa1405040 | -0.822523 | 2.264025e-53 | -8.615850e-47 |
| Msa0229100 | Msa1407810 | 0.810030 | 1.411726e-50 | -8.615850e-47 |
| Msa0229100 | Msa1408230 | -0.815101 | 1.098441e-51 | -8.615850e-47 |
| Msa0229100 | Msa1410480 | -0.809554 | 1.786612e-50 | -8.615850e-47 |
| Msa0229100 | Msa1410500 | -0.815475 | 9.071520e-52 | -8.615850e-47 |
| Msa0229100 | Msa1415510 | -0.822360 | 2.469679e-53 | -8.615850e-47 |
| Msa0229100 | Msa1423560 | -0.802533 | 5.363050e-49 | -8.615850e-47 |
| Msa0229100 | Msa1434860 | -0.812910 | 3.343067e-51 | -8.615850e-47 |
| Msa0229100 | Msa1437590 | 0.808031 | 3.782480e-50 | -8.615850e-47 |
| Msa0229100 | Msa1437780 | 0.811569 | 6.555547e-51 | -8.615850e-47 |
| Msa0229100 | Msa1440140 | -0.803622 | 3.193224e-49 | -8.615850e-47 |
| Msa0229100 | Msa1444130 | -0.815414 | 9.357707e-52 | -8.615850e-47 |
| Msa0229100 | Msa1444690 | -0.814221 | 1.720262e-51 | -8.615850e-47 |
| Msa0229100 | Msa1454300 | -0.805020 | 1.633259e-49 | -8.615850e-47 |
| Msa0229100 | Msa1455200 | 0.817860 | 2.648117e-52 | -8.615850e-47 |
| Msa0229100 | Msa1459680 | -0.803480 | 3.416999e-49 | -8.615850e-47 |
| Msa0229100 | Msa1462610 | 0.813033 | 3.140919e-51 | -8.615850e-47 |
| Msa0229100 | Msa1462700 | -0.825124 | 5.560814e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229100 | MtrunA17_Chr3g0108841 | 88.710 | 124 | 14 | 0 | 24 | 147 | 29 | 152 | 2.72e-78 | 228 |
| Msa0229100 | MtrunA17_Chr3g0108711 | 83.621 | 116 | 14 | 2 | 33 | 147 | 38 | 149 | 3.90e-64 | 192 |
| Msa0229100 | MtrunA17_Chr3g0108701 | 76.056 | 71 | 17 | 0 | 77 | 147 | 53 | 123 | 1.84e-26 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229100 | AT5G58240.2 | 59.333 | 150 | 51 | 1 | 6 | 145 | 8 | 157 | 7.32e-60 | 182 |
| Msa0229100 | AT5G58240.1 | 59.333 | 150 | 51 | 1 | 6 | 145 | 28 | 177 | 9.13e-60 | 183 |
| Msa0229100 | AT5G58240.3 | 63.025 | 119 | 44 | 0 | 27 | 145 | 7 | 125 | 3.02e-50 | 157 |
Find 32 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAAAGGAACATAGTTATT+TGG | 0.181008 | 2_2:+684056 | Msa0229100:three_prime_UTR |
| TAGTTGTTTATTTACCTTAA+TGG | 0.217298 | 2_2:-682679 | None:intergenic |
| GAACATAGTTATTTGGAAAT+TGG | 0.229693 | 2_2:+684063 | Msa0229100:three_prime_UTR |
| CTCCTCTACTCACTCCATTA+AGG | 0.247889 | 2_2:+682665 | Msa0229100:five_prime_UTR |
| CCTCTTGTGCCATTTCTTCA+AGG | 0.271826 | 2_2:-683947 | None:intergenic |
| GCTGTTGAATACTATGATTT+TGG | 0.282921 | 2_2:+682787 | Msa0229100:CDS |
| CAATGATGACATTTATGATT+TGG | 0.306333 | 2_2:+683757 | Msa0229100:CDS |
| AATTAAAATATTGATAATAA+AGG | 0.340533 | 2_2:+684041 | Msa0229100:three_prime_UTR |
| TGGATTTAGAGAGGAAAGAT+AGG | 0.366670 | 2_2:+683922 | Msa0229100:CDS |
| AGATAGGAGCCTTGAAGAAA+TGG | 0.398545 | 2_2:+683938 | Msa0229100:CDS |
| TATGTTTCTTACGGTAGCTT+TGG | 0.426990 | 2_2:+684090 | Msa0229100:three_prime_UTR |
| ATGTAAGTGATGATGCATTA+TGG | 0.441950 | 2_2:-683510 | None:intergenic |
| ATTGGAAGTTATGTTTCTTA+CGG | 0.470193 | 2_2:+684081 | Msa0229100:three_prime_UTR |
| AACCAGGATGGACCTCAAGC+TGG | 0.517750 | 2_2:+683674 | Msa0229100:intron |
| GCAGATAAATGAAAAGGAGA+AGG | 0.524751 | 2_2:+683878 | Msa0229100:intron |
| AACCTACGTCCTGCTGTCAC+TGG | 0.530201 | 2_2:+682871 | Msa0229100:CDS |
| TTGTTCTTGTATACACATCA+AGG | 0.538035 | 2_2:+682631 | Msa0229100:five_prime_UTR |
| TTCATATCCATATACTTCCT+CGG | 0.540594 | 2_2:+683714 | Msa0229100:CDS |
| CCTTGAAGAAATGGCACAAG+AGG | 0.544026 | 2_2:+683947 | Msa0229100:CDS |
| AGTGATGCAGATAAATGAAA+AGG | 0.545433 | 2_2:+683872 | Msa0229100:intron |
| ATGATGAGAATATTGAGTTA+TGG | 0.557271 | 2_2:+683449 | Msa0229100:CDS |
| TTGTATGAAAGACTGAACTA+TGG | 0.558673 | 2_2:-682825 | None:intergenic |
| TACCTTAATGGAGTGAGTAG+AGG | 0.565031 | 2_2:-682667 | None:intergenic |
| TGGCGCATAGCACATAAACT+TGG | 0.598736 | 2_2:+683469 | Msa0229100:CDS |
| CAAGACATACCAGTGACAGC+AGG | 0.605749 | 2_2:-682880 | None:intergenic |
| GGAACTGATTGTCCAGCTTG+AGG | 0.613109 | 2_2:-683686 | None:intergenic |
| GTTGAAAAGTAAGCTAGCTG+TGG | 0.621405 | 2_2:+683902 | Msa0229100:CDS |
| AGCTAGCTGTGGATTTAGAG+AGG | 0.624532 | 2_2:+683913 | Msa0229100:CDS |
| AGTATATGGATATGAACATG+AGG | 0.648556 | 2_2:-683707 | None:intergenic |
| AGCAGGACGTAGGTTGACAA+AGG | 0.667098 | 2_2:-682863 | None:intergenic |
| TATGAAAGACTGAACTATGG+TGG | 0.701492 | 2_2:-682822 | None:intergenic |
| TACCAGTGACAGCAGGACGT+AGG | 0.754574 | 2_2:-682873 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTAAGGAATTTTTTAA+AGG | + | chr2_2:683195-683214 | Msa0229100:intron | 10.0% |
| !!! | TATTTAAGGAATTTTTTAAA+GGG | + | chr2_2:683196-683215 | Msa0229100:intron | 10.0% |
| !!! | ATATTTAAGGAATTTTTTAA+AGG | + | chr2_2:683195-683214 | Msa0229100:intron | 10.0% |
| !!! | TATTTAAGGAATTTTTTAAA+GGG | + | chr2_2:683196-683215 | Msa0229100:intron | 10.0% |
| !!! | AGATTAATGTTACTTTTATT+GGG | + | chr2_2:682749-682768 | Msa0229100:intron | 15.0% |
| !! | AAATAGTGTCTAAATATTTA+AGG | + | chr2_2:683182-683201 | Msa0229100:intron | 15.0% |
| !!! | ATTTAAGGAATTTTTTAAAG+GGG | + | chr2_2:683197-683216 | Msa0229100:intron | 15.0% |
| !!! | CATTTGTGTTTTTAATAATT+TGG | + | chr2_2:683790-683809 | Msa0229100:intron | 15.0% |
| !! | CTAAAAAACAAGTAAAAATT+TGG | + | chr2_2:683830-683849 | Msa0229100:intron | 15.0% |
| !!! | AGATTAATGTTACTTTTATT+GGG | + | chr2_2:682749-682768 | Msa0229100:intron | 15.0% |
| !! | AAATAGTGTCTAAATATTTA+AGG | + | chr2_2:683182-683201 | Msa0229100:intron | 15.0% |
| !!! | ATTTAAGGAATTTTTTAAAG+GGG | + | chr2_2:683197-683216 | Msa0229100:intron | 15.0% |
| !!! | CATTTGTGTTTTTAATAATT+TGG | + | chr2_2:683790-683809 | Msa0229100:intron | 15.0% |
| !! | CTAAAAAACAAGTAAAAATT+TGG | + | chr2_2:683830-683849 | Msa0229100:intron | 15.0% |
| !! | TAGTTGTTTATTTACCTTAA+TGG | - | chr2_2:682682-682701 | None:intergenic | 20.0% |
| !!! | AAGTTAACATTTGATGATTA+TGG | - | chr2_2:682706-682725 | None:intergenic | 20.0% |
| !! | AGTAACATTAATCTCATATA+TGG | - | chr2_2:682743-682762 | None:intergenic | 20.0% |
| !!! | GAGATTAATGTTACTTTTAT+TGG | + | chr2_2:682748-682767 | Msa0229100:intron | 20.0% |
| !!! | GATTAATGTTACTTTTATTG+GGG | + | chr2_2:682750-682769 | Msa0229100:intron | 20.0% |
| !! | TAATTAACATCAGACTAAAA+AGG | - | chr2_2:683003-683022 | None:intergenic | 20.0% |
| !! | TGTATAAAATTGTTCAATTC+TGG | + | chr2_2:683089-683108 | Msa0229100:intron | 20.0% |
| !! | ATTAATCTATCTTTACAATC+TGG | + | chr2_2:683268-683287 | Msa0229100:intron | 20.0% |
| !!! | TATTTGATTTTGAGCATATA+AGG | + | chr2_2:683571-683590 | Msa0229100:intron | 20.0% |
| !! | AATAAAGGAACATAGTTATT+TGG | + | chr2_2:684056-684075 | Msa0229100:three_prime_UTR | 20.0% |
| !! | TAGTTGTTTATTTACCTTAA+TGG | - | chr2_2:682682-682701 | None:intergenic | 20.0% |
| !!! | AAGTTAACATTTGATGATTA+TGG | - | chr2_2:682706-682725 | None:intergenic | 20.0% |
| !! | AGTAACATTAATCTCATATA+TGG | - | chr2_2:682743-682762 | None:intergenic | 20.0% |
| !!! | GAGATTAATGTTACTTTTAT+TGG | + | chr2_2:682748-682767 | Msa0229100:intron | 20.0% |
| !!! | GATTAATGTTACTTTTATTG+GGG | + | chr2_2:682750-682769 | Msa0229100:intron | 20.0% |
| !! | TAATTAACATCAGACTAAAA+AGG | - | chr2_2:683003-683022 | None:intergenic | 20.0% |
| !! | TGTATAAAATTGTTCAATTC+TGG | + | chr2_2:683089-683108 | Msa0229100:intron | 20.0% |
| !! | ATTAATCTATCTTTACAATC+TGG | + | chr2_2:683268-683287 | Msa0229100:intron | 20.0% |
| !!! | TATTTGATTTTGAGCATATA+AGG | + | chr2_2:683571-683590 | Msa0229100:intron | 20.0% |
| !! | AATAAAGGAACATAGTTATT+TGG | + | chr2_2:684056-684075 | Msa0229100:three_prime_UTR | 20.0% |
| !! | TTACAATTTGCATTTTGCTA+TGG | - | chr2_2:682595-682614 | None:intergenic | 25.0% |
| ! | TATTTAAGCTTGAAGATCAT+AGG | - | chr2_2:682935-682954 | None:intergenic | 25.0% |
| ! | ATGATGAGAATATTGAGTTA+TGG | + | chr2_2:683449-683468 | Msa0229100:CDS | 25.0% |
| ! | CAATGATGACATTTATGATT+TGG | + | chr2_2:683757-683776 | Msa0229100:CDS | 25.0% |
| !!! | TTTTATAGTGTCACTTTCAA+AGG | - | chr2_2:683995-684014 | None:intergenic | 25.0% |
| ! | GAACATAGTTATTTGGAAAT+TGG | + | chr2_2:684063-684082 | Msa0229100:three_prime_UTR | 25.0% |
| ! | ATTGGAAGTTATGTTTCTTA+CGG | + | chr2_2:684081-684100 | Msa0229100:three_prime_UTR | 25.0% |
| !! | TTACAATTTGCATTTTGCTA+TGG | - | chr2_2:682595-682614 | None:intergenic | 25.0% |
| ! | TATTTAAGCTTGAAGATCAT+AGG | - | chr2_2:682935-682954 | None:intergenic | 25.0% |
| ! | ATGATGAGAATATTGAGTTA+TGG | + | chr2_2:683449-683468 | Msa0229100:CDS | 25.0% |
| ! | CAATGATGACATTTATGATT+TGG | + | chr2_2:683757-683776 | Msa0229100:CDS | 25.0% |
| !!! | TTTTATAGTGTCACTTTCAA+AGG | - | chr2_2:683995-684014 | None:intergenic | 25.0% |
| ! | GAACATAGTTATTTGGAAAT+TGG | + | chr2_2:684063-684082 | Msa0229100:three_prime_UTR | 25.0% |
| ! | ATTGGAAGTTATGTTTCTTA+CGG | + | chr2_2:684081-684100 | Msa0229100:three_prime_UTR | 25.0% |
| TTGTTCTTGTATACACATCA+AGG | + | chr2_2:682631-682650 | Msa0229100:five_prime_UTR | 30.0% | |
| TATTGGGGTGTAAATAAAGA+TGG | + | chr2_2:682765-682784 | Msa0229100:intron | 30.0% | |
| ! | GCTGTTGAATACTATGATTT+TGG | + | chr2_2:682787-682806 | Msa0229100:CDS | 30.0% |
| TTGTATGAAAGACTGAACTA+TGG | - | chr2_2:682828-682847 | None:intergenic | 30.0% | |
| !!! | TCAATTCTGGTTTTTCATCT+TGG | + | chr2_2:683102-683121 | Msa0229100:intron | 30.0% |
| TGGTACGTAGTAATACATAT+CGG | + | chr2_2:683236-683255 | Msa0229100:intron | 30.0% | |
| TCAAATTCAGCTTCAAAATC+CGG | - | chr2_2:683355-683374 | None:intergenic | 30.0% | |
| ! | ATGTAAGTGATGATGCATTA+TGG | - | chr2_2:683513-683532 | None:intergenic | 30.0% |
| TGTATCCAAGTAAGACAATT+TGG | + | chr2_2:683535-683554 | Msa0229100:intron | 30.0% | |
| TTTCTCCAAATTGTCTTACT+TGG | - | chr2_2:683543-683562 | None:intergenic | 30.0% | |
| ATTGTATAGCCATATAGCAT+TGG | - | chr2_2:683625-683644 | None:intergenic | 30.0% | |
| CTGGTTCAAAAAGATTGATT+TGG | - | chr2_2:683660-683679 | None:intergenic | 30.0% | |
| ! | CAAATCAATCTTTTTGAACC+AGG | + | chr2_2:683658-683677 | Msa0229100:intron | 30.0% |
| AGTATATGGATATGAACATG+AGG | - | chr2_2:683710-683729 | None:intergenic | 30.0% | |
| TTCATATCCATATACTTCCT+CGG | + | chr2_2:683714-683733 | Msa0229100:CDS | 30.0% | |
| !! | GATGACATTTATGATTTGGT+AGG | + | chr2_2:683761-683780 | Msa0229100:intron | 30.0% |
| !! | ACATTTATGATTTGGTAGGA+TGG | + | chr2_2:683765-683784 | Msa0229100:intron | 30.0% |
| AGTGATGCAGATAAATGAAA+AGG | + | chr2_2:683872-683891 | Msa0229100:intron | 30.0% | |
| TTGTTCTTGTATACACATCA+AGG | + | chr2_2:682631-682650 | Msa0229100:five_prime_UTR | 30.0% | |
| TATTGGGGTGTAAATAAAGA+TGG | + | chr2_2:682765-682784 | Msa0229100:intron | 30.0% | |
| ! | GCTGTTGAATACTATGATTT+TGG | + | chr2_2:682787-682806 | Msa0229100:CDS | 30.0% |
| TTGTATGAAAGACTGAACTA+TGG | - | chr2_2:682828-682847 | None:intergenic | 30.0% | |
| !!! | TCAATTCTGGTTTTTCATCT+TGG | + | chr2_2:683102-683121 | Msa0229100:intron | 30.0% |
| TGGTACGTAGTAATACATAT+CGG | + | chr2_2:683236-683255 | Msa0229100:intron | 30.0% | |
| TCAAATTCAGCTTCAAAATC+CGG | - | chr2_2:683355-683374 | None:intergenic | 30.0% | |
| ! | ATGTAAGTGATGATGCATTA+TGG | - | chr2_2:683513-683532 | None:intergenic | 30.0% |
| TGTATCCAAGTAAGACAATT+TGG | + | chr2_2:683535-683554 | Msa0229100:intron | 30.0% | |
| TTTCTCCAAATTGTCTTACT+TGG | - | chr2_2:683543-683562 | None:intergenic | 30.0% | |
| ATTGTATAGCCATATAGCAT+TGG | - | chr2_2:683625-683644 | None:intergenic | 30.0% | |
| CTGGTTCAAAAAGATTGATT+TGG | - | chr2_2:683660-683679 | None:intergenic | 30.0% | |
| ! | CAAATCAATCTTTTTGAACC+AGG | + | chr2_2:683658-683677 | Msa0229100:intron | 30.0% |
| AGTATATGGATATGAACATG+AGG | - | chr2_2:683710-683729 | None:intergenic | 30.0% | |
| TTCATATCCATATACTTCCT+CGG | + | chr2_2:683714-683733 | Msa0229100:CDS | 30.0% | |
| !! | GATGACATTTATGATTTGGT+AGG | + | chr2_2:683761-683780 | Msa0229100:intron | 30.0% |
| !! | ACATTTATGATTTGGTAGGA+TGG | + | chr2_2:683765-683784 | Msa0229100:intron | 30.0% |
| AGTGATGCAGATAAATGAAA+AGG | + | chr2_2:683872-683891 | Msa0229100:intron | 30.0% | |
| TATGAAAGACTGAACTATGG+TGG | - | chr2_2:682825-682844 | None:intergenic | 35.0% | |
| ATAATAGATCAAAGAGGCGA+GGG | - | chr2_2:682908-682927 | None:intergenic | 35.0% | |
| AATAATAGATCAAAGAGGCG+AGG | - | chr2_2:682909-682928 | None:intergenic | 35.0% | |
| GGAGCAATAATAGATCAAAG+AGG | - | chr2_2:682914-682933 | None:intergenic | 35.0% | |
| ! | CTTTCCTTTTTATCTTTCGC+AGG | + | chr2_2:682971-682990 | Msa0229100:intron | 35.0% |
| ATGACCTGCGAAAGATAAAA+AGG | - | chr2_2:682978-682997 | None:intergenic | 35.0% | |
| GGGGTTTAGATTTAGAGATA+TGG | + | chr2_2:683216-683235 | Msa0229100:intron | 35.0% | |
| GGTACGTAGTAATACATATC+GGG | + | chr2_2:683237-683256 | Msa0229100:intron | 35.0% | |
| TCTTTACAATCTGGTAAGTG+TGG | + | chr2_2:683277-683296 | Msa0229100:intron | 35.0% | |
| CTTTACAATCTGGTAAGTGT+GGG | + | chr2_2:683278-683297 | Msa0229100:intron | 35.0% | |
| !! | CTATTTGAGTTGTACTTACG+AGG | - | chr2_2:683304-683323 | None:intergenic | 35.0% |
| ACAACAACATTTGATATGCC+CGG | + | chr2_2:683333-683352 | Msa0229100:intron | 35.0% | |
| CAAATTCAGCTTCAAAATCC+GGG | - | chr2_2:683354-683373 | None:intergenic | 35.0% | |
| ! | TCAATCTTTTTGAACCAGGA+TGG | + | chr2_2:683662-683681 | Msa0229100:intron | 35.0% |
| CATATACTTCCTCGGAAAAA+CGG | + | chr2_2:683722-683741 | Msa0229100:CDS | 35.0% | |
| GCAGATAAATGAAAAGGAGA+AGG | + | chr2_2:683878-683897 | Msa0229100:intron | 35.0% | |
| TGGATTTAGAGAGGAAAGAT+AGG | + | chr2_2:683922-683941 | Msa0229100:CDS | 35.0% | |
| TATGTTTCTTACGGTAGCTT+TGG | + | chr2_2:684090-684109 | Msa0229100:three_prime_UTR | 35.0% | |
| TATGAAAGACTGAACTATGG+TGG | - | chr2_2:682825-682844 | None:intergenic | 35.0% | |
| ATAATAGATCAAAGAGGCGA+GGG | - | chr2_2:682908-682927 | None:intergenic | 35.0% | |
| AATAATAGATCAAAGAGGCG+AGG | - | chr2_2:682909-682928 | None:intergenic | 35.0% | |
| GGAGCAATAATAGATCAAAG+AGG | - | chr2_2:682914-682933 | None:intergenic | 35.0% | |
| ! | CTTTCCTTTTTATCTTTCGC+AGG | + | chr2_2:682971-682990 | Msa0229100:intron | 35.0% |
| ATGACCTGCGAAAGATAAAA+AGG | - | chr2_2:682978-682997 | None:intergenic | 35.0% | |
| GGGGTTTAGATTTAGAGATA+TGG | + | chr2_2:683216-683235 | Msa0229100:intron | 35.0% | |
| GGTACGTAGTAATACATATC+GGG | + | chr2_2:683237-683256 | Msa0229100:intron | 35.0% | |
| TCTTTACAATCTGGTAAGTG+TGG | + | chr2_2:683277-683296 | Msa0229100:intron | 35.0% | |
| CTTTACAATCTGGTAAGTGT+GGG | + | chr2_2:683278-683297 | Msa0229100:intron | 35.0% | |
| !! | CTATTTGAGTTGTACTTACG+AGG | - | chr2_2:683304-683323 | None:intergenic | 35.0% |
| ACAACAACATTTGATATGCC+CGG | + | chr2_2:683333-683352 | Msa0229100:intron | 35.0% | |
| CAAATTCAGCTTCAAAATCC+GGG | - | chr2_2:683354-683373 | None:intergenic | 35.0% | |
| ! | TCAATCTTTTTGAACCAGGA+TGG | + | chr2_2:683662-683681 | Msa0229100:intron | 35.0% |
| CATATACTTCCTCGGAAAAA+CGG | + | chr2_2:683722-683741 | Msa0229100:CDS | 35.0% | |
| GCAGATAAATGAAAAGGAGA+AGG | + | chr2_2:683878-683897 | Msa0229100:intron | 35.0% | |
| TGGATTTAGAGAGGAAAGAT+AGG | + | chr2_2:683922-683941 | Msa0229100:CDS | 35.0% | |
| TATGTTTCTTACGGTAGCTT+TGG | + | chr2_2:684090-684109 | Msa0229100:three_prime_UTR | 35.0% | |
| TACCTTAATGGAGTGAGTAG+AGG | - | chr2_2:682670-682689 | None:intergenic | 40.0% | |
| ACGTAGTAATACATATCGGG+TGG | + | chr2_2:683240-683259 | Msa0229100:intron | 40.0% | |
| CGTAGTAATACATATCGGGT+GGG | + | chr2_2:683241-683260 | Msa0229100:intron | 40.0% | |
| TGCCTAAGACCAATGCTATA+TGG | + | chr2_2:683613-683632 | Msa0229100:intron | 40.0% | |
| !! | AGCCATATAGCATTGGTCTT+AGG | - | chr2_2:683618-683637 | None:intergenic | 40.0% |
| !! | CGTTTTTCCGAGGAAGTATA+TGG | - | chr2_2:683724-683743 | None:intergenic | 40.0% |
| GTTGAAAAGTAAGCTAGCTG+TGG | + | chr2_2:683902-683921 | Msa0229100:CDS | 40.0% | |
| AGATAGGAGCCTTGAAGAAA+TGG | + | chr2_2:683938-683957 | Msa0229100:CDS | 40.0% | |
| TACCTTAATGGAGTGAGTAG+AGG | - | chr2_2:682670-682689 | None:intergenic | 40.0% | |
| ACGTAGTAATACATATCGGG+TGG | + | chr2_2:683240-683259 | Msa0229100:intron | 40.0% | |
| CGTAGTAATACATATCGGGT+GGG | + | chr2_2:683241-683260 | Msa0229100:intron | 40.0% | |
| TGCCTAAGACCAATGCTATA+TGG | + | chr2_2:683613-683632 | Msa0229100:intron | 40.0% | |
| !! | AGCCATATAGCATTGGTCTT+AGG | - | chr2_2:683618-683637 | None:intergenic | 40.0% |
| !! | CGTTTTTCCGAGGAAGTATA+TGG | - | chr2_2:683724-683743 | None:intergenic | 40.0% |
| GTTGAAAAGTAAGCTAGCTG+TGG | + | chr2_2:683902-683921 | Msa0229100:CDS | 40.0% | |
| AGATAGGAGCCTTGAAGAAA+TGG | + | chr2_2:683938-683957 | Msa0229100:CDS | 40.0% | |
| CTCCTCTACTCACTCCATTA+AGG | + | chr2_2:682665-682684 | Msa0229100:five_prime_UTR | 45.0% | |
| TGGCGCATAGCACATAAACT+TGG | + | chr2_2:683469-683488 | Msa0229100:CDS | 45.0% | |
| !! | TCGAAATCACCGTTTTTCCG+AGG | - | chr2_2:683734-683753 | None:intergenic | 45.0% |
| AGCTAGCTGTGGATTTAGAG+AGG | + | chr2_2:683913-683932 | Msa0229100:CDS | 45.0% | |
| !! | CCTCTTGTGCCATTTCTTCA+AGG | - | chr2_2:683950-683969 | None:intergenic | 45.0% |
| CCTTGAAGAAATGGCACAAG+AGG | + | chr2_2:683947-683966 | Msa0229100:CDS | 45.0% | |
| CTCCTCTACTCACTCCATTA+AGG | + | chr2_2:682665-682684 | Msa0229100:five_prime_UTR | 45.0% | |
| TGGCGCATAGCACATAAACT+TGG | + | chr2_2:683469-683488 | Msa0229100:CDS | 45.0% | |
| !! | TCGAAATCACCGTTTTTCCG+AGG | - | chr2_2:683734-683753 | None:intergenic | 45.0% |
| AGCTAGCTGTGGATTTAGAG+AGG | + | chr2_2:683913-683932 | Msa0229100:CDS | 45.0% | |
| !! | CCTCTTGTGCCATTTCTTCA+AGG | - | chr2_2:683950-683969 | None:intergenic | 45.0% |
| CCTTGAAGAAATGGCACAAG+AGG | + | chr2_2:683947-683966 | Msa0229100:CDS | 45.0% | |
| !! | GTTAATTAAAAAAAAAAAAT+TGG | + | chr2_2:683015-683034 | Msa0229100:intron | 5.0% |
| !!! | AATTAAAATATTGATAATAA+AGG | + | chr2_2:684041-684060 | Msa0229100:three_prime_UTR | 5.0% |
| !! | GTTAATTAAAAAAAAAAAAT+TGG | + | chr2_2:683015-683034 | Msa0229100:intron | 5.0% |
| !!! | AATTAAAATATTGATAATAA+AGG | + | chr2_2:684041-684060 | Msa0229100:three_prime_UTR | 5.0% |
| ! | AGCAGGACGTAGGTTGACAA+AGG | - | chr2_2:682866-682885 | None:intergenic | 50.0% |
| CAAGACATACCAGTGACAGC+AGG | - | chr2_2:682883-682902 | None:intergenic | 50.0% | |
| GGAACTGATTGTCCAGCTTG+AGG | - | chr2_2:683689-683708 | None:intergenic | 50.0% | |
| ! | AGCAGGACGTAGGTTGACAA+AGG | - | chr2_2:682866-682885 | None:intergenic | 50.0% |
| CAAGACATACCAGTGACAGC+AGG | - | chr2_2:682883-682902 | None:intergenic | 50.0% | |
| GGAACTGATTGTCCAGCTTG+AGG | - | chr2_2:683689-683708 | None:intergenic | 50.0% | |
| AACCTACGTCCTGCTGTCAC+TGG | + | chr2_2:682871-682890 | Msa0229100:CDS | 55.0% | |
| TACCAGTGACAGCAGGACGT+AGG | - | chr2_2:682876-682895 | None:intergenic | 55.0% | |
| ACACGCTTCACTTCGCGCTT+CGG | - | chr2_2:683415-683434 | None:intergenic | 55.0% | |
| AACCAGGATGGACCTCAAGC+TGG | + | chr2_2:683674-683693 | Msa0229100:intron | 55.0% | |
| AACCTACGTCCTGCTGTCAC+TGG | + | chr2_2:682871-682890 | Msa0229100:CDS | 55.0% | |
| TACCAGTGACAGCAGGACGT+AGG | - | chr2_2:682876-682895 | None:intergenic | 55.0% | |
| ACACGCTTCACTTCGCGCTT+CGG | - | chr2_2:683415-683434 | None:intergenic | 55.0% | |
| AACCAGGATGGACCTCAAGC+TGG | + | chr2_2:683674-683693 | Msa0229100:intron | 55.0% | |
| GTCCAGCTTGAGGTCCATCC+TGG | - | chr2_2:683679-683698 | None:intergenic | 60.0% | |
| GTCCAGCTTGAGGTCCATCC+TGG | - | chr2_2:683679-683698 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 682524 | 684137 | 682524 | ID=Msa0229100;Name=Msa0229100 |
| chr2_2 | mRNA | 682524 | 684137 | 682524 | ID=Msa0229100-mRNA-1;Parent=Msa0229100;Name=Msa0229100-mRNA-1;_AED=0.09;_eAED=0.09;_QI=163|0.75|0.8|1|0.75|0.8|5|139|147 |
| chr2_2 | exon | 682524 | 682686 | 682524 | ID=Msa0229100-mRNA-1:exon:160;Parent=Msa0229100-mRNA-1 |
| chr2_2 | exon | 682784 | 682892 | 682784 | ID=Msa0229100-mRNA-1:exon:161;Parent=Msa0229100-mRNA-1 |
| chr2_2 | exon | 683425 | 683543 | 683425 | ID=Msa0229100-mRNA-1:exon:162;Parent=Msa0229100-mRNA-1 |
| chr2_2 | exon | 683680 | 683778 | 683680 | ID=Msa0229100-mRNA-1:exon:163;Parent=Msa0229100-mRNA-1 |
| chr2_2 | exon | 683882 | 684137 | 683882 | ID=Msa0229100-mRNA-1:exon:164;Parent=Msa0229100-mRNA-1 |
| chr2_2 | five_prime_UTR | 682524 | 682686 | 682524 | ID=Msa0229100-mRNA-1:five_prime_utr;Parent=Msa0229100-mRNA-1 |
| chr2_2 | CDS | 682784 | 682892 | 682784 | ID=Msa0229100-mRNA-1:cds;Parent=Msa0229100-mRNA-1 |
| chr2_2 | CDS | 683425 | 683543 | 683425 | ID=Msa0229100-mRNA-1:cds;Parent=Msa0229100-mRNA-1 |
| chr2_2 | CDS | 683680 | 683778 | 683680 | ID=Msa0229100-mRNA-1:cds;Parent=Msa0229100-mRNA-1 |
| chr2_2 | CDS | 683882 | 683998 | 683882 | ID=Msa0229100-mRNA-1:cds;Parent=Msa0229100-mRNA-1 |
| chr2_2 | three_prime_UTR | 683999 | 684137 | 683999 | ID=Msa0229100-mRNA-1:three_prime_utr;Parent=Msa0229100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
