Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510750 | XP_024634011.2 | 96.330 | 109 | 3 | 1 | 1 | 108 | 42 | 150 | 4.65e-68 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510750 | A0A396IWG2 | 96.330 | 109 | 3 | 1 | 1 | 108 | 1 | 109 | 1.62e-67 | 207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0510750 | 0.806778 | 6.973221e-50 | -8.615850e-47 |
| Msa0011060 | Msa0510750 | 0.810800 | 9.624547e-51 | -8.615850e-47 |
| Msa0011100 | Msa0510750 | 0.817802 | 2.730409e-52 | -8.615850e-47 |
| Msa0016380 | Msa0510750 | 0.804175 | 2.451028e-49 | -8.615850e-47 |
| Msa0016830 | Msa0510750 | 0.812900 | 3.359215e-51 | -8.615850e-47 |
| Msa0030760 | Msa0510750 | 0.814412 | 1.561119e-51 | -8.615850e-47 |
| Msa0049670 | Msa0510750 | 0.819148 | 1.352011e-52 | -8.615850e-47 |
| Msa0050320 | Msa0510750 | 0.803165 | 3.971513e-49 | -8.615850e-47 |
| Msa0053260 | Msa0510750 | 0.813814 | 2.115048e-51 | -8.615850e-47 |
| Msa0056220 | Msa0510750 | 0.811526 | 6.700062e-51 | -8.615850e-47 |
| Msa0056230 | Msa0510750 | 0.810814 | 9.557209e-51 | -8.615850e-47 |
| Msa0060080 | Msa0510750 | 0.801981 | 6.967463e-49 | -8.615850e-47 |
| Msa0067750 | Msa0510750 | 0.807762 | 4.313783e-50 | -8.615850e-47 |
| Msa0084550 | Msa0510750 | 0.835264 | 1.856882e-56 | -8.615850e-47 |
| Msa0086620 | Msa0510750 | 0.817617 | 3.005452e-52 | -8.615850e-47 |
| Msa0089470 | Msa0510750 | 0.814433 | 1.544646e-51 | -8.615850e-47 |
| Msa0090350 | Msa0510750 | 0.818264 | 2.146164e-52 | -8.615850e-47 |
| Msa0094900 | Msa0510750 | 0.834086 | 3.673622e-56 | -8.615850e-47 |
| Msa0098750 | Msa0510750 | 0.824935 | 6.162109e-54 | -8.615850e-47 |
| Msa0099090 | Msa0510750 | 0.802337 | 5.885253e-49 | -8.615850e-47 |
| Msa0109260 | Msa0510750 | 0.800651 | 1.304164e-48 | -8.615850e-47 |
| Msa0130620 | Msa0510750 | 0.835013 | 2.148032e-56 | -8.615850e-47 |
| Msa0137810 | Msa0510750 | 0.818701 | 1.708449e-52 | -8.615850e-47 |
| Msa0151210 | Msa0510750 | 0.801204 | 1.005497e-48 | -8.615850e-47 |
| Msa0154720 | Msa0510750 | 0.804656 | 1.945476e-49 | -8.615850e-47 |
| Msa0155500 | Msa0510750 | 0.812516 | 4.076374e-51 | -8.615850e-47 |
| Msa0163960 | Msa0510750 | 0.806862 | 6.692004e-50 | -8.615850e-47 |
| Msa0165820 | Msa0510750 | 0.806764 | 7.020379e-50 | -8.615850e-47 |
| Msa0170730 | Msa0510750 | 0.806591 | 7.636900e-50 | -8.615850e-47 |
| Msa0176530 | Msa0510750 | 0.833817 | 4.287920e-56 | -8.615850e-47 |
| Msa0178440 | Msa0510750 | 0.811513 | 6.741616e-51 | -8.615850e-47 |
| Msa0180540 | Msa0510750 | 0.819277 | 1.263779e-52 | -8.615850e-47 |
| Msa0184030 | Msa0510750 | 0.805370 | 1.379536e-49 | -8.615850e-47 |
| Msa0184850 | Msa0510750 | 0.821413 | 4.090815e-53 | -8.615850e-47 |
| Msa0185180 | Msa0510750 | 0.835405 | 1.710424e-56 | -8.615850e-47 |
| Msa0193270 | Msa0510750 | 0.808759 | 2.644765e-50 | -8.615850e-47 |
| Msa0198140 | Msa0510750 | 0.808089 | 3.674944e-50 | -8.615850e-47 |
| Msa0198220 | Msa0510750 | 0.809404 | 1.924018e-50 | -8.615850e-47 |
| Msa0208040 | Msa0510750 | 0.801267 | 9.760992e-49 | -8.615850e-47 |
| Msa0208710 | Msa0510750 | 0.801574 | 8.444939e-49 | -8.615850e-47 |
| Msa0209590 | Msa0510750 | 0.804890 | 1.737996e-49 | -8.615850e-47 |
| Msa0211460 | Msa0510750 | -0.801817 | 7.528750e-49 | -8.615850e-47 |
| Msa0212950 | Msa0510750 | 0.843371 | 1.459733e-58 | -8.615850e-47 |
| Msa0225070 | Msa0510750 | 0.808160 | 3.550748e-50 | -8.615850e-47 |
| Msa0227970 | Msa0510750 | 0.816051 | 6.747569e-52 | -8.615850e-47 |
| Msa0228360 | Msa0510750 | 0.816049 | 6.756940e-52 | -8.615850e-47 |
| Msa0234660 | Msa0510750 | 0.830965 | 2.181938e-55 | -8.615850e-47 |
| Msa0235410 | Msa0510750 | -0.802121 | 6.520557e-49 | -8.615850e-47 |
| Msa0369080 | Msa0510750 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa0370350 | Msa0510750 | 0.814170 | 1.765999e-51 | -8.615850e-47 |
| Msa0372990 | Msa0510750 | 0.812704 | 3.708038e-51 | -8.615850e-47 |
| Msa0375930 | Msa0510750 | 0.804926 | 1.708580e-49 | -8.615850e-47 |
| Msa0379890 | Msa0510750 | 0.816072 | 6.674978e-52 | -8.615850e-47 |
| Msa0379950 | Msa0510750 | 0.850480 | 1.652034e-60 | -8.615850e-47 |
| Msa0382060 | Msa0510750 | 0.814649 | 1.383231e-51 | -8.615850e-47 |
| Msa0403720 | Msa0510750 | 0.811443 | 6.983265e-51 | -8.615850e-47 |
| Msa0404880 | Msa0510750 | 0.830481 | 2.866270e-55 | -8.615850e-47 |
| Msa0424570 | Msa0510750 | 0.807550 | 4.785390e-50 | -8.615850e-47 |
| Msa0431560 | Msa0510750 | 0.817440 | 3.293388e-52 | -8.615850e-47 |
| Msa0452120 | Msa0510750 | 0.812467 | 4.178022e-51 | -8.615850e-47 |
| Msa0462530 | Msa0510750 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
| Msa0463580 | Msa0510750 | 0.822490 | 2.304277e-53 | -8.615850e-47 |
| Msa0475690 | Msa0510750 | 0.810015 | 1.422266e-50 | -8.615850e-47 |
| Msa0475700 | Msa0510750 | 0.805929 | 1.052940e-49 | -8.615850e-47 |
| Msa0476570 | Msa0510750 | 0.800960 | 1.127551e-48 | -8.615850e-47 |
| Msa0476730 | Msa0510750 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
| Msa0253230 | Msa0510750 | 0.833079 | 6.551977e-56 | -8.615850e-47 |
| Msa0272990 | Msa0510750 | 0.822197 | 2.694187e-53 | -8.615850e-47 |
| Msa0278340 | Msa0510750 | 0.807171 | 5.757742e-50 | -8.615850e-47 |
| Msa0304350 | Msa0510750 | 0.828088 | 1.091835e-54 | -8.615850e-47 |
| Msa0305910 | Msa0510750 | 0.833778 | 4.385311e-56 | -8.615850e-47 |
| Msa0310260 | Msa0510750 | 0.807312 | 5.375561e-50 | -8.615850e-47 |
| Msa0331070 | Msa0510750 | 0.803440 | 3.482102e-49 | -8.615850e-47 |
| Msa0339340 | Msa0510750 | 0.836160 | 1.101192e-56 | -8.615850e-47 |
| Msa0340830 | Msa0510750 | 0.824555 | 7.576885e-54 | -8.615850e-47 |
| Msa0340870 | Msa0510750 | 0.832250 | 1.052451e-55 | -8.615850e-47 |
| Msa0351930 | Msa0510750 | 0.817574 | 3.072840e-52 | -8.615850e-47 |
| Msa0355630 | Msa0510750 | 0.808205 | 3.472646e-50 | -8.615850e-47 |
| Msa0483090 | Msa0510750 | 0.824691 | 7.036400e-54 | -8.615850e-47 |
| Msa0483410 | Msa0510750 | 0.817417 | 3.334509e-52 | -8.615850e-47 |
| Msa0484220 | Msa0510750 | 0.813657 | 2.290800e-51 | -8.615850e-47 |
| Msa0510660 | Msa0510750 | 0.997126 | 2.670024e-237 | -8.615850e-47 |
| Msa0510750 | Msa0512930 | 0.800150 | 1.649525e-48 | -8.615850e-47 |
| Msa0510750 | Msa0516000 | 0.804855 | 1.767572e-49 | -8.615850e-47 |
| Msa0510750 | Msa0520560 | 0.816376 | 5.708890e-52 | -8.615850e-47 |
| Msa0510750 | Msa0525180 | 0.823294 | 1.496700e-53 | -8.615850e-47 |
| Msa0510750 | Msa0530250 | 0.803753 | 2.999090e-49 | -8.615850e-47 |
| Msa0510750 | Msa0540160 | 0.817367 | 3.420513e-52 | -8.615850e-47 |
| Msa0510750 | Msa0546020 | 0.811789 | 5.873892e-51 | -8.615850e-47 |
| Msa0510750 | Msa0554700 | 0.815073 | 1.114484e-51 | -8.615850e-47 |
| Msa0510750 | Msa0555510 | 0.804360 | 2.242828e-49 | -8.615850e-47 |
| Msa0510750 | Msa0558800 | 0.819292 | 1.253804e-52 | -8.615850e-47 |
| Msa0510750 | Msa0559640 | 0.810746 | 9.886544e-51 | -8.615850e-47 |
| Msa0510750 | Msa0564580 | 0.823512 | 1.331013e-53 | -8.615850e-47 |
| Msa0510750 | Msa0565150 | 0.800467 | 1.421897e-48 | -8.615850e-47 |
| Msa0510750 | Msa0565320 | 0.833378 | 5.521108e-56 | -8.615850e-47 |
| Msa0510750 | Msa0565470 | 0.842596 | 2.348488e-58 | -8.615850e-47 |
| Msa0510750 | Msa0565760 | 0.829920 | 3.929434e-55 | -8.615850e-47 |
| Msa0510750 | Msa0565860 | 0.832527 | 8.983959e-56 | -8.615850e-47 |
| Msa0510750 | Msa0566010 | 0.815255 | 1.015222e-51 | -8.615850e-47 |
| Msa0510750 | Msa0568460 | 0.824553 | 7.585472e-54 | -8.615850e-47 |
| Msa0510750 | Msa0577960 | 0.822288 | 2.566463e-53 | -8.615850e-47 |
| Msa0510750 | Msa0582270 | 0.807902 | 4.027982e-50 | -8.615850e-47 |
| Msa0510750 | Msa0601470 | 0.820794 | 5.681086e-53 | -8.615850e-47 |
| Msa0510750 | Msa0604640 | 0.818702 | 1.707324e-52 | -8.615850e-47 |
| Msa0510750 | Msa0608940 | 0.837807 | 4.179555e-57 | -8.615850e-47 |
| Msa0510750 | Msa0612880 | 0.810318 | 1.223712e-50 | -8.615850e-47 |
| Msa0510750 | Msa0622450 | 0.803319 | 3.688842e-49 | -8.615850e-47 |
| Msa0510750 | Msa0625550 | 0.819366 | 1.206024e-52 | -8.615850e-47 |
| Msa0510750 | Msa0635070 | 0.806746 | 7.081282e-50 | -8.615850e-47 |
| Msa0510750 | Msa0649530 | 0.809725 | 1.641742e-50 | -8.615850e-47 |
| Msa0510750 | Msa0653370 | 0.804134 | 2.498822e-49 | -8.615850e-47 |
| Msa0510750 | Msa0656570 | 0.809104 | 2.231862e-50 | -8.615850e-47 |
| Msa0510750 | Msa0659020 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
| Msa0510750 | Msa0660070 | 0.800438 | 1.441350e-48 | -8.615850e-47 |
| Msa0510750 | Msa0687320 | 0.800491 | 1.406022e-48 | -8.615850e-47 |
| Msa0510750 | Msa0691740 | 0.827045 | 1.943003e-54 | -8.615850e-47 |
| Msa0510750 | Msa0696600 | 0.806642 | 7.450107e-50 | -8.615850e-47 |
| Msa0510750 | Msa0700870 | 0.827854 | 1.242649e-54 | -8.615850e-47 |
| Msa0510750 | Msa0700930 | 0.824899 | 6.285699e-54 | -8.615850e-47 |
| Msa0510750 | Msa0702310 | 0.810376 | 1.188497e-50 | -8.615850e-47 |
| Msa0510750 | Msa0714060 | 0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0510750 | Msa0729120 | 0.818657 | 1.748259e-52 | -8.615850e-47 |
| Msa0510750 | Msa0729590 | 0.817354 | 3.445164e-52 | -8.615850e-47 |
| Msa0510750 | Msa0733240 | 0.819114 | 1.376319e-52 | -8.615850e-47 |
| Msa0510750 | Msa0741600 | 0.824827 | 6.534522e-54 | -8.615850e-47 |
| Msa0510750 | Msa0741710 | 0.819027 | 1.440503e-52 | -8.615850e-47 |
| Msa0510750 | Msa0742690 | 0.800943 | 1.136943e-48 | -8.615850e-47 |
| Msa0510750 | Msa0749160 | 0.848596 | 5.543059e-60 | -8.615850e-47 |
| Msa0510750 | Msa0752830 | 0.808236 | 3.419872e-50 | -8.615850e-47 |
| Msa0510750 | Msa0754190 | 0.804647 | 1.954012e-49 | -8.615850e-47 |
| Msa0510750 | Msa0755500 | 0.837864 | 4.041756e-57 | -8.615850e-47 |
| Msa0510750 | Msa0756440 | 0.805835 | 1.102064e-49 | -8.615850e-47 |
| Msa0510750 | Msa0768240 | 0.823688 | 1.210329e-53 | -8.615850e-47 |
| Msa0510750 | Msa0826820 | 0.821099 | 4.833440e-53 | -8.615850e-47 |
| Msa0510750 | Msa0827560 | 0.802726 | 4.892516e-49 | -8.615850e-47 |
| Msa0510750 | Msa0834830 | 0.843130 | 1.693410e-58 | -8.615850e-47 |
| Msa0510750 | Msa0840450 | 0.804827 | 1.791898e-49 | -8.615850e-47 |
| Msa0510750 | Msa0849290 | 0.814305 | 1.648842e-51 | -8.615850e-47 |
| Msa0510750 | Msa0865500 | 0.821230 | 4.508879e-53 | -8.615850e-47 |
| Msa0510750 | Msa0866310 | 0.814646 | 1.385898e-51 | -8.615850e-47 |
| Msa0510750 | Msa0868050 | 0.804513 | 2.083381e-49 | -8.615850e-47 |
| Msa0510750 | Msa0876150 | 0.809364 | 1.962949e-50 | -8.615850e-47 |
| Msa0510750 | Msa0927890 | 0.823973 | 1.037943e-53 | -8.615850e-47 |
| Msa0510750 | Msa0934150 | 0.812297 | 4.551415e-51 | -8.615850e-47 |
| Msa0510750 | Msa0934290 | 0.803813 | 2.914061e-49 | -8.615850e-47 |
| Msa0510750 | Msa0935930 | 0.810624 | 1.050840e-50 | -8.615850e-47 |
| Msa0510750 | Msa0941150 | 0.846315 | 2.345945e-59 | -8.615850e-47 |
| Msa0510750 | Msa0967260 | 0.832251 | 1.051833e-55 | -8.615850e-47 |
| Msa0510750 | Msa0971780 | 0.800787 | 1.223574e-48 | -8.615850e-47 |
| Msa0510750 | Msa0998940 | 0.813634 | 2.317308e-51 | -8.615850e-47 |
| Msa0510750 | Msa1021680 | 0.839456 | 1.567461e-57 | -8.615850e-47 |
| Msa0510750 | Msa1026160 | 0.821042 | 4.981908e-53 | -8.615850e-47 |
| Msa0510750 | Msa1044790 | 0.801892 | 7.265531e-49 | -8.615850e-47 |
| Msa0510750 | Msa1056590 | 0.813910 | 2.014513e-51 | -8.615850e-47 |
| Msa0510750 | Msa1057940 | 0.811244 | 7.713846e-51 | -8.615850e-47 |
| Msa0510750 | Msa1071380 | 0.834471 | 2.940412e-56 | -8.615850e-47 |
| Msa0510750 | Msa1073550 | 0.814418 | 1.556158e-51 | -8.615850e-47 |
| Msa0510750 | Msa1090020 | 0.807672 | 4.509200e-50 | -8.615850e-47 |
| Msa0510750 | Msa1093190 | 0.813904 | 2.021466e-51 | -8.615850e-47 |
| Msa0510750 | Msa1099330 | 0.805609 | 1.228993e-49 | -8.615850e-47 |
| Msa0510750 | Msa1101300 | 0.811733 | 6.039748e-51 | -8.615850e-47 |
| Msa0510750 | Msa1112010 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
| Msa0510750 | Msa1112230 | 0.813604 | 2.352903e-51 | -8.615850e-47 |
| Msa0510750 | Msa1140700 | 0.811773 | 5.920327e-51 | -8.615850e-47 |
| Msa0510750 | Msa1143860 | 0.805487 | 1.303918e-49 | -8.615850e-47 |
| Msa0510750 | Msa1144380 | 0.802930 | 4.440141e-49 | -8.615850e-47 |
| Msa0510750 | Msa1144420 | 0.827463 | 1.542999e-54 | -8.615850e-47 |
| Msa0510750 | Msa1149570 | 0.806335 | 8.648004e-50 | -8.615850e-47 |
| Msa0510750 | Msa1164830 | 0.810429 | 1.158002e-50 | -8.615850e-47 |
| Msa0510750 | Msa1182480 | 0.843123 | 1.700630e-58 | -8.615850e-47 |
| Msa0510750 | Msa1182960 | 0.804952 | 1.687059e-49 | -8.615850e-47 |
| Msa0510750 | Msa1194480 | 0.805515 | 1.286373e-49 | -8.615850e-47 |
| Msa0510750 | Msa1203840 | 0.806146 | 9.479327e-50 | -8.615850e-47 |
| Msa0510750 | Msa1203860 | 0.817847 | 2.666294e-52 | -8.615850e-47 |
| Msa0510750 | Msa1212150 | 0.800426 | 1.449034e-48 | -8.615850e-47 |
| Msa0510750 | Msa1216700 | 0.804562 | 2.035397e-49 | -8.615850e-47 |
| Msa0510750 | Msa1216900 | 0.815876 | 7.383292e-52 | -8.615850e-47 |
| Msa0510750 | Msa1225140 | 0.804684 | 1.919811e-49 | -8.615850e-47 |
| Msa0510750 | Msa1236990 | 0.809231 | 2.096201e-50 | -8.615850e-47 |
| Msa0510750 | Msa1240240 | 0.824500 | 7.806109e-54 | -8.615850e-47 |
| Msa0510750 | Msa1272770 | 0.801673 | 8.057314e-49 | -8.615850e-47 |
| Msa0510750 | Msa1278080 | 0.809842 | 1.549254e-50 | -8.615850e-47 |
| Msa0510750 | Msa1279200 | 0.801934 | 7.122195e-49 | -8.615850e-47 |
| Msa0510750 | Msa1288970 | 0.819540 | 1.100837e-52 | -8.615850e-47 |
| Msa0510750 | Msa1290090 | 0.822691 | 2.068594e-53 | -8.615850e-47 |
| Msa0510750 | Msa1295210 | 0.805511 | 1.288957e-49 | -8.615850e-47 |
| Msa0510750 | Msa1296270 | 0.830211 | 3.336150e-55 | -8.615850e-47 |
| Msa0510750 | Msa1317340 | 0.811115 | 8.227952e-51 | -8.615850e-47 |
| Msa0510750 | Msa1320550 | 0.819058 | 1.417538e-52 | -8.615850e-47 |
| Msa0510750 | Msa1320660 | 0.819110 | 1.379046e-52 | -8.615850e-47 |
| Msa0510750 | Msa1329660 | 0.816744 | 4.722093e-52 | -8.615850e-47 |
| Msa0510750 | Msa1330910 | 0.818293 | 2.114001e-52 | -8.615850e-47 |
| Msa0510750 | Msa1336350 | 0.801954 | 7.055459e-49 | -8.615850e-47 |
| Msa0510750 | Msa1339310 | 0.812932 | 3.306044e-51 | -8.615850e-47 |
| Msa0510750 | Msa1345490 | 0.839262 | 1.760436e-57 | -8.615850e-47 |
| Msa0510750 | Msa1346340 | 0.800061 | 1.719495e-48 | -8.615850e-47 |
| Msa0510750 | Msa1348860 | 0.807799 | 4.237452e-50 | -8.615850e-47 |
| Msa0510750 | Msa1372470 | 0.803424 | 3.509413e-49 | -8.615850e-47 |
| Msa0510750 | Msa1374210 | 0.814536 | 1.465495e-51 | -8.615850e-47 |
| Msa0510750 | Msa1376010 | 0.803332 | 3.666532e-49 | -8.615850e-47 |
| Msa0510750 | Msa1381830 | 0.804979 | 1.665185e-49 | -8.615850e-47 |
| Msa0510750 | Msa1384970 | 0.844509 | 7.236062e-59 | -8.615850e-47 |
| Msa0510750 | Msa1387100 | 0.819710 | 1.006724e-52 | -8.615850e-47 |
| Msa0510750 | Msa1388270 | 0.800254 | 1.571118e-48 | -8.615850e-47 |
| Msa0510750 | Msa1390480 | 0.994613 | 1.039135e-208 | -8.615850e-47 |
| Msa0510750 | Msa1392570 | 0.825215 | 5.292754e-54 | -8.615850e-47 |
| Msa0510750 | Msa1398310 | 0.810780 | 9.720498e-51 | -8.615850e-47 |
| Msa0510750 | Msa1410500 | 0.804842 | 1.778917e-49 | -8.615850e-47 |
| Msa0510750 | Msa1414560 | 0.819733 | 9.945483e-53 | -8.615850e-47 |
| Msa0510750 | Msa1418840 | 0.803189 | 3.925641e-49 | -8.615850e-47 |
| Msa0510750 | Msa1422150 | 0.800520 | 1.386876e-48 | -8.615850e-47 |
| Msa0510750 | Msa1434850 | 0.805760 | 1.142400e-49 | -8.615850e-47 |
| Msa0510750 | Msa1435950 | 0.816550 | 5.219642e-52 | -8.615850e-47 |
| Msa0510750 | Msa1436660 | 0.806121 | 9.593259e-50 | -8.615850e-47 |
| Msa0510750 | Msa1446220 | 0.812317 | 4.505542e-51 | -8.615850e-47 |
| Msa0510750 | Msa1452200 | 0.803173 | 3.954884e-49 | -8.615850e-47 |
| Msa0510750 | Msa1459630 | 0.801223 | 9.962449e-49 | -8.615850e-47 |
| Msa0510750 | Msa1464470 | 0.801322 | 9.508203e-49 | -8.615850e-47 |
| Msa0510750 | Msa1465410 | 0.835552 | 1.570537e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510750 | MtrunA17_Chr3g0116971 | 96.330 | 109 | 3 | 1 | 1 | 108 | 1 | 109 | 3.12e-71 | 207 |
| Msa0510750 | MtrunA17_Chr3g0116951 | 68.908 | 119 | 23 | 6 | 1 | 108 | 6 | 121 | 6.17e-42 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACCCTCTCAACGATTTC+AGG | 0.158944 | 3_4:+59883975 | None:intergenic |
| TTGAAGGCCATCTCACCATT+TGG | 0.332611 | 3_4:+59884062 | None:intergenic |
| GGTTGTGGTGGTGGCGGCCA+TGG | 0.367830 | 3_4:+59883997 | None:intergenic |
| CCTTCGTGGGTAATGTTGAT+TGG | 0.388716 | 3_4:+59883872 | None:intergenic |
| CGATTTCAGGGTTGTGGTGG+TGG | 0.397034 | 3_4:+59883988 | None:intergenic |
| TGAAGGCCATCTCACCATTT+GGG | 0.418823 | 3_4:+59884063 | None:intergenic |
| CAACCCTCTCAACGATTTCA+GGG | 0.425008 | 3_4:+59883976 | None:intergenic |
| CCATTTGACCTGTTCCTTCG+TGG | 0.432698 | 3_4:+59883858 | None:intergenic |
| ATAGACAACCCTCTTGTTGA+AGG | 0.438765 | 3_4:+59884046 | None:intergenic |
| GTCACTCATGGAATACATTC+AGG | 0.444691 | 3_4:-59883836 | Msa0510750:CDS |
| CATTTGACCTGTTCCTTCGT+GGG | 0.467646 | 3_4:+59883859 | None:intergenic |
| CAACAAGAGGGTTGTCTATG+AGG | 0.468986 | 3_4:-59884042 | Msa0510750:CDS |
| CCCTTCGAACTTCTGAAATG+TGG | 0.470828 | 3_4:+59884108 | None:intergenic |
| TCTCAACGATTTCAGGGTTG+TGG | 0.485866 | 3_4:+59883982 | None:intergenic |
| TTTCAGGGTTGTGGTGGTGG+CGG | 0.488542 | 3_4:+59883991 | None:intergenic |
| CGTTGAGAGGGTTGAAGTGG+TGG | 0.489360 | 3_4:-59883967 | Msa0510750:CDS |
| AACATTACCCACGAAGGAAC+AGG | 0.491085 | 3_4:-59883866 | Msa0510750:CDS |
| TATGAGGAGGATGCGATTGA+AGG | 0.492172 | 3_4:-59884026 | Msa0510750:CDS |
| CCACGAAGGAACAGGTCAAA+TGG | 0.498880 | 3_4:-59883858 | Msa0510750:CDS |
| GTACCTGAGGTTAGGCCCTA+TGG | 0.503566 | 3_4:-59883933 | Msa0510750:CDS |
| CCACCATAGGGCCTAACCTC+AGG | 0.504816 | 3_4:+59883930 | None:intergenic |
| GAATACTCTCGCTACCCAAA+TGG | 0.533741 | 3_4:-59884077 | Msa0510750:CDS |
| CCTTCGAACTTCTGAAATGT+GGG | 0.541962 | 3_4:+59884109 | None:intergenic |
| ATGAACGTGTACCTGAGGTT+AGG | 0.542173 | 3_4:-59883941 | Msa0510750:CDS |
| CCCACATTTCAGAAGTTCGA+AGG | 0.543003 | 3_4:-59884109 | Msa0510750:CDS |
| ACAGGTCAAATGGTCACTCA+TGG | 0.552434 | 3_4:-59883848 | Msa0510750:CDS |
| CAACGATTTCAGGGTTGTGG+TGG | 0.564097 | 3_4:+59883985 | None:intergenic |
| GTAGATCACTTGACCACCAT+AGG | 0.569439 | 3_4:+59883917 | None:intergenic |
| AATGTGGGTGTGGTAGTCAT+TGG | 0.581040 | 3_4:+59884124 | None:intergenic |
| GGGTAGCGAGAGTATTCGCT+AGG | 0.581864 | 3_4:+59884083 | None:intergenic |
| AGTGATCTACGAAGAGGACG+TGG | 0.585316 | 3_4:-59883904 | Msa0510750:CDS |
| TCGCTACCCAAATGGTGAGA+TGG | 0.585879 | 3_4:-59884069 | Msa0510750:CDS |
| GTGAGATGGCCTTCAACAAG+AGG | 0.602330 | 3_4:-59884055 | Msa0510750:CDS |
| TAGATCACTTGACCACCATA+GGG | 0.606041 | 3_4:+59883918 | None:intergenic |
| GAACTTCTGAAATGTGGGTG+TGG | 0.614497 | 3_4:+59884114 | None:intergenic |
| CCACATTTCAGAAGTTCGAA+GGG | 0.620439 | 3_4:-59884108 | Msa0510750:CDS |
| CAACCCTGAAATCGTTGAGA+GGG | 0.621410 | 3_4:-59883979 | Msa0510750:CDS |
| CCTGAGGTTAGGCCCTATGG+TGG | 0.626513 | 3_4:-59883930 | Msa0510750:CDS |
| ACAACCCTGAAATCGTTGAG+AGG | 0.647655 | 3_4:-59883980 | Msa0510750:CDS |
| CAAGAGGGTTGTCTATGAGG+AGG | 0.649483 | 3_4:-59884039 | Msa0510750:CDS |
| GCGATTGAAGGATCACGCCA+TGG | 0.655981 | 3_4:-59884014 | Msa0510750:CDS |
| TGAGATGGCCTTCAACAAGA+GGG | 0.673455 | 3_4:-59884054 | Msa0510750:CDS |
| TGGTCAAGTGATCTACGAAG+AGG | 0.694239 | 3_4:-59883910 | Msa0510750:CDS |
| AATCGTTGAGAGGGTTGAAG+TGG | 0.698905 | 3_4:-59883970 | Msa0510750:CDS |
| CCAATCAACATTACCCACGA+AGG | 0.702298 | 3_4:-59883872 | Msa0510750:CDS |
| GGAATATGAACGTGTACCTG+AGG | 0.717370 | 3_4:-59883946 | Msa0510750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCTTCGAACTTCTGAAATGT+GGG | + | chr3_4:59883858-59883877 | None:intergenic | 40.0% |
| CCACATTTCAGAAGTTCGAA+GGG | - | chr3_4:59883856-59883875 | Msa0510750:CDS | 40.0% | |
| ATAGACAACCCTCTTGTTGA+AGG | + | chr3_4:59883921-59883940 | None:intergenic | 40.0% | |
| TAGATCACTTGACCACCATA+GGG | + | chr3_4:59884049-59884068 | None:intergenic | 40.0% | |
| GTCACTCATGGAATACATTC+AGG | - | chr3_4:59884128-59884147 | Msa0510750:CDS | 40.0% | |
| AATGTGGGTGTGGTAGTCAT+TGG | + | chr3_4:59883843-59883862 | None:intergenic | 45.0% | |
| !! | GAACTTCTGAAATGTGGGTG+TGG | + | chr3_4:59883853-59883872 | None:intergenic | 45.0% |
| CCCACATTTCAGAAGTTCGA+AGG | - | chr3_4:59883855-59883874 | Msa0510750:CDS | 45.0% | |
| !! | CCCTTCGAACTTCTGAAATG+TGG | + | chr3_4:59883859-59883878 | None:intergenic | 45.0% |
| GAATACTCTCGCTACCCAAA+TGG | - | chr3_4:59883887-59883906 | Msa0510750:CDS | 45.0% | |
| TGAAGGCCATCTCACCATTT+GGG | + | chr3_4:59883904-59883923 | None:intergenic | 45.0% | |
| TTGAAGGCCATCTCACCATT+TGG | + | chr3_4:59883905-59883924 | None:intergenic | 45.0% | |
| TGAGATGGCCTTCAACAAGA+GGG | - | chr3_4:59883910-59883929 | Msa0510750:CDS | 45.0% | |
| CAACAAGAGGGTTGTCTATG+AGG | - | chr3_4:59883922-59883941 | Msa0510750:CDS | 45.0% | |
| TATGAGGAGGATGCGATTGA+AGG | - | chr3_4:59883938-59883957 | Msa0510750:CDS | 45.0% | |
| TCTCAACGATTTCAGGGTTG+TGG | + | chr3_4:59883985-59884004 | None:intergenic | 45.0% | |
| ACAACCCTGAAATCGTTGAG+AGG | - | chr3_4:59883984-59884003 | Msa0510750:CDS | 45.0% | |
| CAACCCTGAAATCGTTGAGA+GGG | - | chr3_4:59883985-59884004 | Msa0510750:CDS | 45.0% | |
| CAACCCTCTCAACGATTTCA+GGG | + | chr3_4:59883991-59884010 | None:intergenic | 45.0% | |
| TCAACCCTCTCAACGATTTC+AGG | + | chr3_4:59883992-59884011 | None:intergenic | 45.0% | |
| AATCGTTGAGAGGGTTGAAG+TGG | - | chr3_4:59883994-59884013 | Msa0510750:CDS | 45.0% | |
| GGAATATGAACGTGTACCTG+AGG | - | chr3_4:59884018-59884037 | Msa0510750:CDS | 45.0% | |
| ATGAACGTGTACCTGAGGTT+AGG | - | chr3_4:59884023-59884042 | Msa0510750:CDS | 45.0% | |
| GTAGATCACTTGACCACCAT+AGG | + | chr3_4:59884050-59884069 | None:intergenic | 45.0% | |
| TGGTCAAGTGATCTACGAAG+AGG | - | chr3_4:59884054-59884073 | Msa0510750:CDS | 45.0% | |
| CCTTCGTGGGTAATGTTGAT+TGG | + | chr3_4:59884095-59884114 | None:intergenic | 45.0% | |
| CCAATCAACATTACCCACGA+AGG | - | chr3_4:59884092-59884111 | Msa0510750:CDS | 45.0% | |
| AACATTACCCACGAAGGAAC+AGG | - | chr3_4:59884098-59884117 | Msa0510750:CDS | 45.0% | |
| CATTTGACCTGTTCCTTCGT+GGG | + | chr3_4:59884108-59884127 | None:intergenic | 45.0% | |
| ACAGGTCAAATGGTCACTCA+TGG | - | chr3_4:59884116-59884135 | Msa0510750:CDS | 45.0% | |
| TCGCTACCCAAATGGTGAGA+TGG | - | chr3_4:59883895-59883914 | Msa0510750:CDS | 50.0% | |
| GTGAGATGGCCTTCAACAAG+AGG | - | chr3_4:59883909-59883928 | Msa0510750:CDS | 50.0% | |
| CAAGAGGGTTGTCTATGAGG+AGG | - | chr3_4:59883925-59883944 | Msa0510750:CDS | 50.0% | |
| CAACGATTTCAGGGTTGTGG+TGG | + | chr3_4:59883982-59884001 | None:intergenic | 50.0% | |
| AGTGATCTACGAAGAGGACG+TGG | - | chr3_4:59884060-59884079 | Msa0510750:CDS | 50.0% | |
| CCATTTGACCTGTTCCTTCG+TGG | + | chr3_4:59884109-59884128 | None:intergenic | 50.0% | |
| CCACGAAGGAACAGGTCAAA+TGG | - | chr3_4:59884106-59884125 | Msa0510750:CDS | 50.0% | |
| !! | GGGTAGCGAGAGTATTCGCT+AGG | + | chr3_4:59883884-59883903 | None:intergenic | 55.0% |
| GCGATTGAAGGATCACGCCA+TGG | - | chr3_4:59883950-59883969 | Msa0510750:CDS | 55.0% | |
| !! | TTTCAGGGTTGTGGTGGTGG+CGG | + | chr3_4:59883976-59883995 | None:intergenic | 55.0% |
| CGATTTCAGGGTTGTGGTGG+TGG | + | chr3_4:59883979-59883998 | None:intergenic | 55.0% | |
| CGTTGAGAGGGTTGAAGTGG+TGG | - | chr3_4:59883997-59884016 | Msa0510750:CDS | 55.0% | |
| GTACCTGAGGTTAGGCCCTA+TGG | - | chr3_4:59884031-59884050 | Msa0510750:CDS | 55.0% | |
| CCACCATAGGGCCTAACCTC+AGG | + | chr3_4:59884037-59884056 | None:intergenic | 60.0% | |
| CCTGAGGTTAGGCCCTATGG+TGG | - | chr3_4:59884034-59884053 | Msa0510750:CDS | 60.0% | |
| !! | GGTTGTGGTGGTGGCGGCCA+TGG | + | chr3_4:59883970-59883989 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 59883830 | 59884156 | 59883830 | ID=Msa0510750;Name=Msa0510750 |
| chr3_4 | mRNA | 59883830 | 59884156 | 59883830 | ID=Msa0510750-mRNA-1;Parent=Msa0510750;Name=Msa0510750-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|108 |
| chr3_4 | exon | 59883830 | 59884156 | 59883830 | ID=Msa0510750-mRNA-1:exon:14210;Parent=Msa0510750-mRNA-1 |
| chr3_4 | CDS | 59883830 | 59884156 | 59883830 | ID=Msa0510750-mRNA-1:cds;Parent=Msa0510750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
