Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542020 | XP_003606834.1 | 94.700 | 566 | 25 | 1 | 18 | 583 | 17 | 577 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542020 | sp|P21885|SPEA_BACSU | 36.605 | 489 | 298 | 4 | 94 | 578 | 7 | 487 | 3.47e-103 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542020 | G7JEX3 | 94.700 | 566 | 25 | 1 | 18 | 583 | 17 | 577 | 0.0 | 1092 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0542020 | 0.806565 | 7.733554e-50 | -8.615850e-47 |
| Msa0021240 | Msa0542020 | 0.809671 | 1.686343e-50 | -8.615850e-47 |
| Msa0024500 | Msa0542020 | 0.804697 | 1.907232e-49 | -8.615850e-47 |
| Msa0027030 | Msa0542020 | 0.805171 | 1.518414e-49 | -8.615850e-47 |
| Msa0029280 | Msa0542020 | 0.812088 | 5.055443e-51 | -8.615850e-47 |
| Msa0033190 | Msa0542020 | 0.805700 | 1.176289e-49 | -8.615850e-47 |
| Msa0067750 | Msa0542020 | 0.808891 | 2.478802e-50 | -8.615850e-47 |
| Msa0075860 | Msa0542020 | 0.811867 | 5.646552e-51 | -8.615850e-47 |
| Msa0075990 | Msa0542020 | 0.813949 | 1.975236e-51 | -8.615850e-47 |
| Msa0076100 | Msa0542020 | 0.832219 | 1.071043e-55 | -8.615850e-47 |
| Msa0079840 | Msa0542020 | 0.801608 | 8.310431e-49 | -8.615850e-47 |
| Msa0081700 | Msa0542020 | 0.808592 | 2.871630e-50 | -8.615850e-47 |
| Msa0092390 | Msa0542020 | 0.801657 | 8.119870e-49 | -8.615850e-47 |
| Msa0097470 | Msa0542020 | 0.836339 | 9.918618e-57 | -8.615850e-47 |
| Msa0110350 | Msa0542020 | 0.815547 | 8.740120e-52 | -8.615850e-47 |
| Msa0127060 | Msa0542020 | 0.834684 | 2.600047e-56 | -8.615850e-47 |
| Msa0133390 | Msa0542020 | 0.837505 | 4.996763e-57 | -8.615850e-47 |
| Msa0135470 | Msa0542020 | 0.802181 | 6.337411e-49 | -8.615850e-47 |
| Msa0138340 | Msa0542020 | 0.830065 | 3.621611e-55 | -8.615850e-47 |
| Msa0147960 | Msa0542020 | 0.829347 | 5.415224e-55 | -8.615850e-47 |
| Msa0150330 | Msa0542020 | -0.802258 | 6.110846e-49 | -8.615850e-47 |
| Msa0159240 | Msa0542020 | 0.824661 | 7.152745e-54 | -8.615850e-47 |
| Msa0164310 | Msa0542020 | 0.823927 | 1.064149e-53 | -8.615850e-47 |
| Msa0165820 | Msa0542020 | 0.805287 | 1.435982e-49 | -8.615850e-47 |
| Msa0167150 | Msa0542020 | 0.810908 | 9.122345e-51 | -8.615850e-47 |
| Msa0169320 | Msa0542020 | 0.815865 | 7.426595e-52 | -8.615850e-47 |
| Msa0174060 | Msa0542020 | 0.821099 | 4.833440e-53 | -8.615850e-47 |
| Msa0181560 | Msa0542020 | 0.810102 | 1.362242e-50 | -8.615850e-47 |
| Msa0184800 | Msa0542020 | 0.832269 | 1.040736e-55 | -8.615850e-47 |
| Msa0184900 | Msa0542020 | 0.811210 | 7.846160e-51 | -8.615850e-47 |
| Msa0189150 | Msa0542020 | 0.820162 | 7.934108e-53 | -8.615850e-47 |
| Msa0194750 | Msa0542020 | 0.822267 | 2.595996e-53 | -8.615850e-47 |
| Msa0195810 | Msa0542020 | 0.816613 | 5.052803e-52 | -8.615850e-47 |
| Msa0207150 | Msa0542020 | 0.837327 | 5.549291e-57 | -8.615850e-47 |
| Msa0208040 | Msa0542020 | 0.802203 | 6.272584e-49 | -8.615850e-47 |
| Msa0208710 | Msa0542020 | 0.824667 | 7.128350e-54 | -8.615850e-47 |
| Msa0209370 | Msa0542020 | 0.804743 | 1.865949e-49 | -8.615850e-47 |
| Msa0225070 | Msa0542020 | 0.805061 | 1.600815e-49 | -8.615850e-47 |
| Msa0225080 | Msa0542020 | 0.804988 | 1.658132e-49 | -8.615850e-47 |
| Msa0229350 | Msa0542020 | 0.825619 | 4.246433e-54 | -8.615850e-47 |
| Msa0236690 | Msa0542020 | 0.828507 | 8.650286e-55 | -8.615850e-47 |
| Msa0375570 | Msa0542020 | 0.804724 | 1.882682e-49 | -8.615850e-47 |
| Msa0383110 | Msa0542020 | 0.812751 | 3.620386e-51 | -8.615850e-47 |
| Msa0385850 | Msa0542020 | 0.802760 | 4.814078e-49 | -8.615850e-47 |
| Msa0387630 | Msa0542020 | 0.801253 | 9.826200e-49 | -8.615850e-47 |
| Msa0390590 | Msa0542020 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0404900 | Msa0542020 | 0.827386 | 1.609667e-54 | -8.615850e-47 |
| Msa0415860 | Msa0542020 | 0.805475 | 1.311493e-49 | -8.615850e-47 |
| Msa0450230 | Msa0542020 | 0.804849 | 1.772635e-49 | -8.615850e-47 |
| Msa0450920 | Msa0542020 | 0.811845 | 5.711094e-51 | -8.615850e-47 |
| Msa0470080 | Msa0542020 | 0.827065 | 1.921554e-54 | -8.615850e-47 |
| Msa0471480 | Msa0542020 | 0.812851 | 3.443179e-51 | -8.615850e-47 |
| Msa0256120 | Msa0542020 | 0.809049 | 2.293071e-50 | -8.615850e-47 |
| Msa0266140 | Msa0542020 | 0.823279 | 1.508564e-53 | -8.615850e-47 |
| Msa0269430 | Msa0542020 | 0.821134 | 4.743854e-53 | -8.615850e-47 |
| Msa0269660 | Msa0542020 | 0.815209 | 1.039599e-51 | -8.615850e-47 |
| Msa0279910 | Msa0542020 | 0.805343 | 1.397639e-49 | -8.615850e-47 |
| Msa0304060 | Msa0542020 | 0.824432 | 8.099125e-54 | -8.615850e-47 |
| Msa0304070 | Msa0542020 | 0.805789 | 1.126572e-49 | -8.615850e-47 |
| Msa0308300 | Msa0542020 | 0.807064 | 6.067726e-50 | -8.615850e-47 |
| Msa0311130 | Msa0542020 | 0.805030 | 1.625033e-49 | -8.615850e-47 |
| Msa0315720 | Msa0542020 | 0.808270 | 3.362819e-50 | -8.615850e-47 |
| Msa0318280 | Msa0542020 | 0.800217 | 1.598235e-48 | -8.615850e-47 |
| Msa0318320 | Msa0542020 | 0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0327870 | Msa0542020 | 0.813963 | 1.961392e-51 | -8.615850e-47 |
| Msa0333350 | Msa0542020 | 0.808096 | 3.663195e-50 | -8.615850e-47 |
| Msa0491160 | Msa0542020 | 0.839106 | 1.932541e-57 | -8.615850e-47 |
| Msa0521190 | Msa0542020 | 0.834990 | 2.177367e-56 | -8.615850e-47 |
| Msa0524570 | Msa0542020 | 0.817571 | 3.077025e-52 | -8.615850e-47 |
| Msa0527210 | Msa0542020 | 0.829137 | 6.090463e-55 | -8.615850e-47 |
| Msa0528830 | Msa0542020 | 0.843594 | 1.272700e-58 | -8.615850e-47 |
| Msa0531270 | Msa0542020 | 0.842968 | 1.869364e-58 | -8.615850e-47 |
| Msa0538050 | Msa0542020 | 0.841521 | 4.517707e-58 | -8.615850e-47 |
| Msa0542020 | Msa0544600 | 0.817653 | 2.948995e-52 | -8.615850e-47 |
| Msa0542020 | Msa0550760 | 0.841751 | 3.930180e-58 | -8.615850e-47 |
| Msa0542020 | Msa0563230 | 0.803357 | 3.622966e-49 | -8.615850e-47 |
| Msa0542020 | Msa0565370 | 0.801444 | 8.977036e-49 | -8.615850e-47 |
| Msa0542020 | Msa0565430 | 0.802663 | 5.041121e-49 | -8.615850e-47 |
| Msa0542020 | Msa0567190 | 0.808679 | 2.750982e-50 | -8.615850e-47 |
| Msa0542020 | Msa0567420 | 0.806067 | 9.848010e-50 | -8.615850e-47 |
| Msa0542020 | Msa0569540 | 0.819117 | 1.374504e-52 | -8.615850e-47 |
| Msa0542020 | Msa0572730 | 0.835428 | 1.687771e-56 | -8.615850e-47 |
| Msa0542020 | Msa0576480 | 0.805000 | 1.649107e-49 | -8.615850e-47 |
| Msa0542020 | Msa0576550 | 0.802249 | 6.136433e-49 | -8.615850e-47 |
| Msa0542020 | Msa0582270 | 0.806311 | 8.749323e-50 | -8.615850e-47 |
| Msa0542020 | Msa0585720 | 0.837317 | 5.581613e-57 | -8.615850e-47 |
| Msa0542020 | Msa0585810 | 0.801709 | 7.921505e-49 | -8.615850e-47 |
| Msa0542020 | Msa0588110 | 0.830671 | 2.575307e-55 | -8.615850e-47 |
| Msa0542020 | Msa0591840 | 0.807424 | 5.089294e-50 | -8.615850e-47 |
| Msa0542020 | Msa0604690 | 0.840028 | 1.112929e-57 | -8.615850e-47 |
| Msa0542020 | Msa0610300 | 0.813292 | 2.756056e-51 | -8.615850e-47 |
| Msa0542020 | Msa0619690 | 0.805346 | 1.395557e-49 | -8.615850e-47 |
| Msa0542020 | Msa0625900 | 0.850958 | 1.212187e-60 | -8.615850e-47 |
| Msa0542020 | Msa0628440 | 0.827614 | 1.419200e-54 | -8.615850e-47 |
| Msa0542020 | Msa0632040 | 0.822369 | 2.458227e-53 | -8.615850e-47 |
| Msa0542020 | Msa0634900 | 0.803797 | 2.936966e-49 | -8.615850e-47 |
| Msa0542020 | Msa0638820 | -0.823138 | 1.627904e-53 | -8.615850e-47 |
| Msa0542020 | Msa0639530 | 0.811974 | 5.351373e-51 | -8.615850e-47 |
| Msa0542020 | Msa0646030 | 0.813177 | 2.920448e-51 | -8.615850e-47 |
| Msa0542020 | Msa0651000 | 0.800336 | 1.511978e-48 | -8.615850e-47 |
| Msa0542020 | Msa0659360 | 0.802643 | 5.089610e-49 | -8.615850e-47 |
| Msa0542020 | Msa0660160 | 0.806420 | 8.296379e-50 | -8.615850e-47 |
| Msa0542020 | Msa0662670 | 0.837262 | 5.766914e-57 | -8.615850e-47 |
| Msa0542020 | Msa0663580 | 0.837432 | 5.216848e-57 | -8.615850e-47 |
| Msa0542020 | Msa0663690 | 0.849814 | 2.540230e-60 | -8.615850e-47 |
| Msa0542020 | Msa0685530 | 0.842482 | 2.516908e-58 | -8.615850e-47 |
| Msa0542020 | Msa0688880 | 0.817773 | 2.771288e-52 | -8.615850e-47 |
| Msa0542020 | Msa0692480 | 0.823471 | 1.360901e-53 | -8.615850e-47 |
| Msa0542020 | Msa0692710 | 0.852392 | 4.758834e-61 | -8.615850e-47 |
| Msa0542020 | Msa0693050 | 0.826777 | 2.252120e-54 | -8.615850e-47 |
| Msa0542020 | Msa0697520 | -0.810232 | 1.277069e-50 | -8.615850e-47 |
| Msa0542020 | Msa0702020 | 0.826313 | 2.904749e-54 | -8.615850e-47 |
| Msa0542020 | Msa0707860 | 0.801438 | 9.004816e-49 | -8.615850e-47 |
| Msa0542020 | Msa0708870 | 0.837802 | 4.192027e-57 | -8.615850e-47 |
| Msa0542020 | Msa0721650 | 0.822409 | 2.405814e-53 | -8.615850e-47 |
| Msa0542020 | Msa0754020 | 0.802825 | 4.668837e-49 | -8.615850e-47 |
| Msa0542020 | Msa0769910 | 0.805278 | 1.442101e-49 | -8.615850e-47 |
| Msa0542020 | Msa0791170 | 0.813404 | 2.604130e-51 | -8.615850e-47 |
| Msa0542020 | Msa0802270 | 0.815148 | 1.072179e-51 | -8.615850e-47 |
| Msa0542020 | Msa0876680 | 0.809515 | 1.821777e-50 | -8.615850e-47 |
| Msa0542020 | Msa0879820 | 0.801156 | 1.028555e-48 | -8.615850e-47 |
| Msa0542020 | Msa0902810 | 0.809750 | 1.621396e-50 | -8.615850e-47 |
| Msa0542020 | Msa0906100 | 0.803962 | 2.713782e-49 | -8.615850e-47 |
| Msa0542020 | Msa0925630 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0542020 | Msa0938150 | 0.810201 | 1.296666e-50 | -8.615850e-47 |
| Msa0542020 | Msa0967890 | 0.801940 | 7.101857e-49 | -8.615850e-47 |
| Msa0542020 | Msa0967900 | 0.810693 | 1.015550e-50 | -8.615850e-47 |
| Msa0542020 | Msa0975440 | 0.813501 | 2.479290e-51 | -8.615850e-47 |
| Msa0542020 | Msa1004300 | 0.842738 | 2.152726e-58 | -8.615850e-47 |
| Msa0542020 | Msa1015020 | 0.816132 | 6.474921e-52 | -8.615850e-47 |
| Msa0542020 | Msa1031620 | 0.800848 | 1.188731e-48 | -8.615850e-47 |
| Msa0542020 | Msa1035790 | 0.802770 | 4.791077e-49 | -8.615850e-47 |
| Msa0542020 | Msa1039860 | 0.806353 | 8.570448e-50 | -8.615850e-47 |
| Msa0542020 | Msa1056590 | 0.814717 | 1.336764e-51 | -8.615850e-47 |
| Msa0542020 | Msa1056790 | 0.805265 | 1.450887e-49 | -8.615850e-47 |
| Msa0542020 | Msa1078600 | 0.810496 | 1.119992e-50 | -8.615850e-47 |
| Msa0542020 | Msa1078770 | 0.815940 | 7.145175e-52 | -8.615850e-47 |
| Msa0542020 | Msa1084210 | 0.828074 | 1.100291e-54 | -8.615850e-47 |
| Msa0542020 | Msa1088000 | 0.823838 | 1.116179e-53 | -8.615850e-47 |
| Msa0542020 | Msa1092770 | 0.807039 | 6.141937e-50 | -8.615850e-47 |
| Msa0542020 | Msa1112230 | 0.826457 | 2.685040e-54 | -8.615850e-47 |
| Msa0542020 | Msa1118870 | 0.800858 | 1.183416e-48 | -8.615850e-47 |
| Msa0542020 | Msa1118890 | 0.801217 | 9.994799e-49 | -8.615850e-47 |
| Msa0542020 | Msa1128230 | 0.835934 | 1.256391e-56 | -8.615850e-47 |
| Msa0542020 | Msa1134420 | 0.824049 | 9.963303e-54 | -8.615850e-47 |
| Msa0542020 | Msa1136770 | 0.827714 | 1.343330e-54 | -8.615850e-47 |
| Msa0542020 | Msa1143820 | 0.834789 | 2.445483e-56 | -8.615850e-47 |
| Msa0542020 | Msa1143860 | 0.807350 | 5.276346e-50 | -8.615850e-47 |
| Msa0542020 | Msa1158540 | 0.804606 | 1.992792e-49 | -8.615850e-47 |
| Msa0542020 | Msa1169600 | 0.822070 | 2.883176e-53 | -8.615850e-47 |
| Msa0542020 | Msa1198830 | 0.815922 | 7.213490e-52 | -8.615850e-47 |
| Msa0542020 | Msa1202710 | 0.835954 | 1.241692e-56 | -8.615850e-47 |
| Msa0542020 | Msa1206510 | 0.814267 | 1.681022e-51 | -8.615850e-47 |
| Msa0542020 | Msa1209990 | 0.822819 | 1.931182e-53 | -8.615850e-47 |
| Msa0542020 | Msa1222890 | 0.822839 | 1.911223e-53 | -8.615850e-47 |
| Msa0542020 | Msa1223060 | 0.817925 | 2.560121e-52 | -8.615850e-47 |
| Msa0542020 | Msa1223600 | 0.815615 | 8.442207e-52 | -8.615850e-47 |
| Msa0542020 | Msa1225140 | 0.810048 | 1.399071e-50 | -8.615850e-47 |
| Msa0542020 | Msa1228600 | 0.845390 | 4.183670e-59 | -8.615850e-47 |
| Msa0542020 | Msa1229880 | 0.800562 | 1.359759e-48 | -8.615850e-47 |
| Msa0542020 | Msa1236190 | 0.808718 | 2.698919e-50 | -8.615850e-47 |
| Msa0542020 | Msa1267390 | 0.850656 | 1.474564e-60 | -8.615850e-47 |
| Msa0542020 | Msa1269370 | 0.829505 | 4.958744e-55 | -8.615850e-47 |
| Msa0542020 | Msa1298170 | 0.805612 | 1.227497e-49 | -8.615850e-47 |
| Msa0542020 | Msa1298480 | 0.823337 | 1.462717e-53 | -8.615850e-47 |
| Msa0542020 | Msa1301610 | 0.824126 | 9.557102e-54 | -8.615850e-47 |
| Msa0542020 | Msa1303030 | 0.816626 | 5.019136e-52 | -8.615850e-47 |
| Msa0542020 | Msa1326780 | 0.826396 | 2.775312e-54 | -8.615850e-47 |
| Msa0542020 | Msa1326800 | 0.828920 | 6.873302e-55 | -8.615850e-47 |
| Msa0542020 | Msa1327690 | 0.829534 | 4.878995e-55 | -8.615850e-47 |
| Msa0542020 | Msa1338600 | 0.807126 | 5.886496e-50 | -8.615850e-47 |
| Msa0542020 | Msa1341390 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
| Msa0542020 | Msa1346220 | 0.853502 | 2.289855e-61 | -8.615850e-47 |
| Msa0542020 | Msa1346340 | 0.844997 | 5.343136e-59 | -8.615850e-47 |
| Msa0542020 | Msa1348180 | 0.815225 | 1.030927e-51 | -8.615850e-47 |
| Msa0542020 | Msa1350550 | 0.805466 | 1.317249e-49 | -8.615850e-47 |
| Msa0542020 | Msa1350580 | 0.814389 | 1.579890e-51 | -8.615850e-47 |
| Msa0542020 | Msa1357090 | 0.849272 | 3.596941e-60 | -8.615850e-47 |
| Msa0542020 | Msa1369220 | 0.818787 | 1.633646e-52 | -8.615850e-47 |
| Msa0542020 | Msa1371540 | 0.830803 | 2.390162e-55 | -8.615850e-47 |
| Msa0542020 | Msa1375980 | 0.832616 | 8.541254e-56 | -8.615850e-47 |
| Msa0542020 | Msa1376010 | 0.809266 | 2.060280e-50 | -8.615850e-47 |
| Msa0542020 | Msa1377980 | 0.853350 | 2.532485e-61 | -8.615850e-47 |
| Msa0542020 | Msa1382100 | 0.815332 | 9.759633e-52 | -8.615850e-47 |
| Msa0542020 | Msa1384410 | 0.813786 | 2.146354e-51 | -8.615850e-47 |
| Msa0542020 | Msa1395380 | 0.805335 | 1.403210e-49 | -8.615850e-47 |
| Msa0542020 | Msa1398150 | 0.809845 | 1.547246e-50 | -8.615850e-47 |
| Msa0542020 | Msa1401640 | 0.841327 | 5.081465e-58 | -8.615850e-47 |
| Msa0542020 | Msa1403820 | 0.804725 | 1.881997e-49 | -8.615850e-47 |
| Msa0542020 | Msa1408280 | 0.852960 | 3.276268e-61 | -8.615850e-47 |
| Msa0542020 | Msa1411930 | 0.819109 | 1.379957e-52 | -8.615850e-47 |
| Msa0542020 | Msa1412270 | 0.811315 | 7.446582e-51 | -8.615850e-47 |
| Msa0542020 | Msa1418840 | 0.813772 | 2.160674e-51 | -8.615850e-47 |
| Msa0542020 | Msa1424250 | 0.814539 | 1.463616e-51 | -8.615850e-47 |
| Msa0542020 | Msa1436660 | 0.809920 | 1.490421e-50 | -8.615850e-47 |
| Msa0542020 | Msa1449510 | 0.811619 | 6.395145e-51 | -8.615850e-47 |
| Msa0542020 | Msa1449690 | 0.800727 | 1.258087e-48 | -8.615850e-47 |
| Msa0542020 | Msa1453180 | 0.800661 | 1.297773e-48 | -8.615850e-47 |
| Msa0542020 | Msa1454300 | 0.805629 | 1.217083e-49 | -8.615850e-47 |
| Msa0542020 | Msa1456170 | 0.826279 | 2.959404e-54 | -8.615850e-47 |
| Msa0542020 | Msa1456180 | 0.801331 | 9.471110e-49 | -8.615850e-47 |
| Msa0542020 | Msa1457390 | 0.800933 | 1.142344e-48 | -8.615850e-47 |
| Msa0542020 | Msa1463920 | 0.850194 | 1.988496e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542020 | MtrunA17_Chr4g0033871 | 94.700 | 566 | 25 | 1 | 18 | 583 | 17 | 577 | 0.0 | 1092 |
| Msa0542020 | MtrunA17_Chr4g0033891 | 81.456 | 577 | 79 | 3 | 1 | 576 | 1 | 550 | 0.0 | 929 |
| Msa0542020 | MtrunA17_Chr4g0033911 | 85.795 | 528 | 75 | 0 | 49 | 576 | 225 | 752 | 0.0 | 920 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 164 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTAAAATGACTCCTTAT+TGG | 0.168923 | 4_1:+26132455 | Msa0542020:three_prime_UTR |
| TTCTGTTTGTGCTTCTAATA+TGG | 0.174686 | 4_1:-26130682 | None:intergenic |
| TTATTGGATATTTAAATATT+TGG | 0.176629 | 4_1:+26132471 | Msa0542020:three_prime_UTR |
| GAGAGCATTGGTAAGGTTTC+GGG | 0.190923 | 4_1:+26132025 | Msa0542020:CDS |
| CCAACATCAACCGCCATTTC+TGG | 0.238173 | 4_1:-26132294 | None:intergenic |
| CTCTCGTATTTCCCATATTC+TGG | 0.251716 | 4_1:-26130396 | None:intergenic |
| TCCTCGAAATTGTCATTTAT+CGG | 0.257328 | 4_1:+26130815 | Msa0542020:CDS |
| AGCATTGCACTGCCAGAATA+TGG | 0.262779 | 4_1:+26130384 | Msa0542020:CDS |
| TGCTTCTAATATGGGTCCTT+GGG | 0.268218 | 4_1:-26130673 | None:intergenic |
| GCTTGGTTGAATACAGTATC+AGG | 0.268880 | 4_1:-26131590 | None:intergenic |
| GACTTGTGGTTTGGAGAGTT+TGG | 0.285707 | 4_1:-26131511 | None:intergenic |
| TTCCTTCCAATTCGAGTTCC+TGG | 0.285931 | 4_1:-26131205 | None:intergenic |
| CTCTGATGATCCAAACAATT+TGG | 0.290446 | 4_1:-26130709 | None:intergenic |
| ACACAGCTGAAGAAATTCTT+AGG | 0.291771 | 4_1:+26132249 | Msa0542020:three_prime_UTR |
| TGGGAAGGTGAAAACCGTTT+TGG | 0.293842 | 4_1:-26129160 | None:intergenic |
| TGGTGAATTGCTGCATTCAT+TGG | 0.299123 | 4_1:-26130457 | None:intergenic |
| CTGTTAGATCAGCCCCTTGC+TGG | 0.315011 | 4_1:-26131391 | None:intergenic |
| AAGCTACAATTTGTAACTTT+CGG | 0.327486 | 4_1:-26132539 | None:intergenic |
| TTGTCATTTATCGGCTATAT+CGG | 0.328484 | 4_1:+26130824 | Msa0542020:CDS |
| AAGTCCTAGTTACCTGCTTT+TGG | 0.329378 | 4_1:+26131529 | Msa0542020:CDS |
| ATCACTTATGCACTTAATCT+TGG | 0.331813 | 4_1:+26131821 | Msa0542020:CDS |
| TCTGTTTGTGCTTCTAATAT+GGG | 0.332552 | 4_1:-26130681 | None:intergenic |
| GAAATCTTATATCGGGATTT+CGG | 0.334553 | 4_1:+26131767 | Msa0542020:CDS |
| GGTGAATTGCTGCATTCATT+GGG | 0.338282 | 4_1:-26130456 | None:intergenic |
| GTGCTTCTAATATGGGTCCT+TGG | 0.338955 | 4_1:-26130674 | None:intergenic |
| GGAGAGCATTGGTAAGGTTT+CGG | 0.339213 | 4_1:+26132024 | Msa0542020:CDS |
| TGGTGGTGTCACTCCATTAC+AGG | 0.339936 | 4_1:+26130914 | Msa0542020:CDS |
| TTGATATGGTTCAGAATCAT+TGG | 0.346637 | 4_1:+26132401 | Msa0542020:three_prime_UTR |
| CAGAAGAGGTTGTCAAGTTC+AGG | 0.367195 | 4_1:-26130648 | None:intergenic |
| ACAGGTATACCTGGAGGATA+TGG | 0.369128 | 4_1:-26132061 | None:intergenic |
| TGGGATCCAGGCAGCAATAA+TGG | 0.370354 | 4_1:+26130761 | Msa0542020:CDS |
| ACAGAAGCAGCCAAATTGTT+TGG | 0.373346 | 4_1:+26130699 | Msa0542020:CDS |
| AAGAAATTCTCCTGGTGAAC+AGG | 0.381246 | 4_1:-26130787 | None:intergenic |
| TCAGTAAGTACTCCGTCTTT+AGG | 0.381290 | 4_1:-26131920 | None:intergenic |
| TGCTATCCAGGAACTCGAAT+TGG | 0.387817 | 4_1:+26131199 | Msa0542020:CDS |
| CACTTAATCTTGGAACTTGT+AGG | 0.388613 | 4_1:+26131831 | Msa0542020:CDS |
| GCAGGTATTGAGTGCTATCC+AGG | 0.393137 | 4_1:+26131187 | Msa0542020:intron |
| TAAAAGAAAAGTAACGATAA+AGG | 0.393781 | 4_1:+26132003 | Msa0542020:CDS |
| GTAGGAAAAGTGGAAGAAAA+TGG | 0.398084 | 4_1:+26129078 | Msa0542020:exon |
| AAATATTTAAATATCCAATA+AGG | 0.401529 | 4_1:-26132469 | None:intergenic |
| GGTAACTAGGACTTGTGGTT+TGG | 0.402917 | 4_1:-26131520 | None:intergenic |
| CTAGCTCAGCCCTCCAGCAA+GGG | 0.409492 | 4_1:+26131378 | Msa0542020:CDS |
| CCTTGCTGGAGGGCTGAGCT+AGG | 0.410613 | 4_1:-26131377 | None:intergenic |
| TTATTCCCGATAAAAGCCTT+TGG | 0.411005 | 4_1:-26131862 | None:intergenic |
| TTGTCGGAGGTACTACTTGT+GGG | 0.411563 | 4_1:+26130742 | Msa0542020:CDS |
| GCCTCGATGACTCGACTCAT+TGG | 0.419230 | 4_1:+26130591 | Msa0542020:CDS |
| GACAACTATAGAAGAAAGTA+AGG | 0.423013 | 4_1:-26132176 | None:intergenic |
| CAGCACCTTCACTTCTTACA+TGG | 0.424209 | 4_1:-26132132 | None:intergenic |
| AAGCGGATGAAATCTTATAT+CGG | 0.425695 | 4_1:+26131759 | Msa0542020:CDS |
| GTCCTGAACTTCCATTTGTA+AGG | 0.426082 | 4_1:-26129276 | None:intergenic |
| AGCCGCAATGGATCAATTGC+AGG | 0.428507 | 4_1:-26131698 | None:intergenic |
| AATAACTGAATCACCTGTAA+TGG | 0.429007 | 4_1:-26130927 | None:intergenic |
| ATCACTTCACCTACTTATCA+TGG | 0.430365 | 4_1:+26131248 | Msa0542020:CDS |
| ATATCAAAAGCATTGAAATC+TGG | 0.436596 | 4_1:-26132385 | None:intergenic |
| GTCCTTACAAATGGAAGTTC+AGG | 0.438286 | 4_1:+26129274 | Msa0542020:CDS |
| AACTAACTGAATGCCAGAAA+TGG | 0.439494 | 4_1:+26132281 | Msa0542020:three_prime_UTR |
| CTCTCAGTAATAACCTCACC+GGG | 0.446512 | 4_1:-26132091 | None:intergenic |
| CATTTGCTAATTTAATCGCT+TGG | 0.448024 | 4_1:-26131607 | None:intergenic |
| AGGCCACTCTGCTGAAGCTC+TGG | 0.449434 | 4_1:-26130477 | None:intergenic |
| GAATTGTTTGTGAACTCGTT+GGG | 0.450040 | 4_1:+26131789 | Msa0542020:CDS |
| AGGTACTACTTGTGGGATCC+AGG | 0.450761 | 4_1:+26130749 | Msa0542020:CDS |
| TTTATCAATTATTATGAGAC+CGG | 0.454597 | 4_1:-26132220 | None:intergenic |
| AGCATGAATGGTAGGAAAAG+TGG | 0.461977 | 4_1:+26129068 | Msa0542020:five_prime_UTR |
| TCATCTATGCTGCACATGTC+AGG | 0.461997 | 4_1:+26131452 | Msa0542020:CDS |
| TGCAGGGACGTCCTTACAAA+TGG | 0.462649 | 4_1:+26129265 | Msa0542020:intron |
| TTCTCAAGCACTGAGATGCC+AGG | 0.468757 | 4_1:-26131656 | None:intergenic |
| GTTGAGATCTAGCAGCATCT+AGG | 0.468914 | 4_1:-26131556 | None:intergenic |
| ACCTCACCGGGGATCAATAC+AGG | 0.471875 | 4_1:-26132079 | None:intergenic |
| ATGGGAAATACGAGAGCGTT+GGG | 0.472269 | 4_1:+26130403 | Msa0542020:CDS |
| GAAGCTCACGGTGCACATCT+AGG | 0.481340 | 4_1:+26131338 | Msa0542020:CDS |
| TCAGAGACATGGTTTCTTGT+CGG | 0.485814 | 4_1:+26130726 | Msa0542020:CDS |
| AGCGGATGAAATCTTATATC+GGG | 0.486805 | 4_1:+26131760 | Msa0542020:CDS |
| AGTGAAGGTGCTGATATTAG+TGG | 0.488793 | 4_1:+26132142 | Msa0542020:CDS |
| CAATGGATCAATTGCAGGAA+TGG | 0.490219 | 4_1:-26131693 | None:intergenic |
| GCCGATAAATGACAATTTCG+AGG | 0.493005 | 4_1:-26130816 | None:intergenic |
| TTGAGATCTAGCAGCATCTA+GGG | 0.495500 | 4_1:-26131555 | None:intergenic |
| TTAGATCAGCCCCTTGCTGG+AGG | 0.497118 | 4_1:-26131388 | None:intergenic |
| ACCGCCACCTCACAGTTTCA+TGG | 0.497498 | 4_1:+26132499 | Msa0542020:three_prime_UTR |
| CCGATAAAAGCCTTTGGACA+TGG | 0.500427 | 4_1:-26131856 | None:intergenic |
| CCTAGCTCAGCCCTCCAGCA+AGG | 0.500862 | 4_1:+26131377 | Msa0542020:CDS |
| GCATTGCACTGCCAGAATAT+GGG | 0.501046 | 4_1:+26130385 | Msa0542020:CDS |
| TACATGGAGTAGATAATTGA+CGG | 0.501521 | 4_1:-26132116 | None:intergenic |
| GCTCGTGATTATATCATCAA+AGG | 0.513244 | 4_1:-26131951 | None:intergenic |
| TCGGGTAAATCATGAGCATA+TGG | 0.513396 | 4_1:-26130621 | None:intergenic |
| ATGAGTCGAGTCATCGAGGC+AGG | 0.515945 | 4_1:-26130588 | None:intergenic |
| GTTGTCAAGTTCAGGAAGCT+CGG | 0.516331 | 4_1:-26130640 | None:intergenic |
| TCCGTCTTTAGGTTGCTGAA+TGG | 0.517648 | 4_1:-26131909 | None:intergenic |
| CTTATTTGTCCATATCCTCC+AGG | 0.518004 | 4_1:+26132052 | Msa0542020:CDS |
| GATGCCAAAAGCAGGTAACT+AGG | 0.520797 | 4_1:-26131533 | None:intergenic |
| TAGTCAGGAACAATGTACTT+AGG | 0.526216 | 4_1:-26130870 | None:intergenic |
| AACTTAATGAAAAGCATGAA+TGG | 0.526298 | 4_1:+26129056 | None:intergenic |
| CTCGTGATTATATCATCAAA+GGG | 0.527399 | 4_1:-26131950 | None:intergenic |
| TGCTCTCTTAAACAATTCCC+TGG | 0.527535 | 4_1:+26131638 | Msa0542020:CDS |
| GATTCCGTCTTATTCCTCTC+AGG | 0.528052 | 4_1:+26129308 | Msa0542020:CDS |
| AGGTTGCCATTATTGCTGCC+TGG | 0.528356 | 4_1:-26130767 | None:intergenic |
| CTGCAAATACCATGATAAGT+AGG | 0.530759 | 4_1:-26131257 | None:intergenic |
| GATCCATTGCGGCTTACTGT+TGG | 0.532942 | 4_1:+26131707 | Msa0542020:CDS |
| CTTGTCGGAGGTACTACTTG+TGG | 0.534948 | 4_1:+26130741 | Msa0542020:CDS |
| GGAATTGTTTGTGAACTCGT+TGG | 0.535480 | 4_1:+26131788 | Msa0542020:CDS |
| TAGCTCAGCCCTCCAGCAAG+GGG | 0.536029 | 4_1:+26131379 | Msa0542020:CDS |
| TTGTCAAGTTCAGGAAGCTC+GGG | 0.537006 | 4_1:-26130639 | None:intergenic |
| ATATCGGCCATGGTATTATC+CGG | 0.538000 | 4_1:+26130840 | Msa0542020:CDS |
| GCATGGCCTCTGTTATGTCC+AGG | 0.538975 | 4_1:-26130561 | None:intergenic |
| TAGATCAGCCCCTTGCTGGA+GGG | 0.546263 | 4_1:-26131387 | None:intergenic |
| CTACTCCATGTAAGAAGTGA+AGG | 0.546727 | 4_1:+26132127 | Msa0542020:CDS |
| GCTTTCAATGCACTAACTAA+AGG | 0.546743 | 4_1:-26130504 | None:intergenic |
| GGATCAATTGCAGGAATGGT+CGG | 0.547650 | 4_1:-26131689 | None:intergenic |
| ACTTAATCTTGGAACTTGTA+GGG | 0.553282 | 4_1:+26131832 | Msa0542020:CDS |
| GATAAAGGAGAGCATTGGTA+AGG | 0.554559 | 4_1:+26132018 | Msa0542020:CDS |
| CATCTAGGGATGCCAAAAGC+AGG | 0.554864 | 4_1:-26131541 | None:intergenic |
| TAATGAAAAGCATGAATGGT+AGG | 0.558225 | 4_1:+26129060 | None:intergenic |
| ACCATGAAACTGTGAGGTGG+CGG | 0.558857 | 4_1:-26132500 | None:intergenic |
| TATGGGAAATACGAGAGCGT+TGG | 0.559578 | 4_1:+26130402 | Msa0542020:CDS |
| TCTTTAGGTTGCTGAATGGA+AGG | 0.572281 | 4_1:-26131905 | None:intergenic |
| TTGAAAGGGGACGACGAGAG+TGG | 0.579236 | 4_1:-26129127 | None:intergenic |
| AAACCAACAGTAAGCCGCAA+TGG | 0.579462 | 4_1:-26131710 | None:intergenic |
| GGAAGAATAAGAAATTCTCC+TGG | 0.582632 | 4_1:-26130795 | None:intergenic |
| GACAACCTCTTCTGTCCCCA+AGG | 0.585276 | 4_1:+26130657 | Msa0542020:CDS |
| GGGATCAATACAGGTATACC+TGG | 0.585742 | 4_1:-26132070 | None:intergenic |
| TCTCTCAGTAATAACCTCAC+CGG | 0.588463 | 4_1:-26132092 | None:intergenic |
| TGTTTGGATCATCAGAGACA+TGG | 0.589643 | 4_1:+26130715 | Msa0542020:CDS |
| AGAGCATTGGTAAGGTTTCG+GGG | 0.589661 | 4_1:+26132026 | Msa0542020:CDS |
| TCCATTCAGCAACCTAAAGA+CGG | 0.595343 | 4_1:+26131908 | Msa0542020:CDS |
| GGTATACCTGTATTGATCCC+CGG | 0.595466 | 4_1:+26132073 | Msa0542020:CDS |
| ATAATGGCAACCTGTTCACC+AGG | 0.600507 | 4_1:+26130777 | Msa0542020:CDS |
| TTCAATGCACTAACTAAAGG+AGG | 0.600852 | 4_1:-26130501 | None:intergenic |
| CCAGAAATGGCGGTTGATGT+TGG | 0.602819 | 4_1:+26132294 | Msa0542020:three_prime_UTR |
| GTAACGATAAAGGAGAGCAT+TGG | 0.603794 | 4_1:+26132013 | Msa0542020:CDS |
| AATGTACTTAGGCACTGCAC+CGG | 0.604306 | 4_1:-26130859 | None:intergenic |
| TTTATCGGCTATATCGGCCA+TGG | 0.610715 | 4_1:+26130830 | Msa0542020:CDS |
| TTCCTGCAATTGATCCATTG+CGG | 0.611741 | 4_1:+26131696 | Msa0542020:CDS |
| GAGACATGGTTTCTTGTCGG+AGG | 0.612936 | 4_1:+26130729 | Msa0542020:CDS |
| CTGATTGTTGATGAAGCTCA+CGG | 0.614046 | 4_1:+26131326 | Msa0542020:CDS |
| CTTGGTTGAATACAGTATCA+GGG | 0.615374 | 4_1:-26131589 | None:intergenic |
| TCTCAAGCACTGAGATGCCA+GGG | 0.617988 | 4_1:-26131655 | None:intergenic |
| TCATCGAGGCAGGAGCGGCA+TGG | 0.619945 | 4_1:-26130578 | None:intergenic |
| CTTGTAGGGACCATGTCCAA+AGG | 0.621624 | 4_1:+26131846 | Msa0542020:CDS |
| ATCCAGGAACTCGAATTGGA+AGG | 0.621828 | 4_1:+26131203 | Msa0542020:CDS |
| ATGTCCAGGAAAGTGAAAAG+TGG | 0.622147 | 4_1:-26130547 | None:intergenic |
| TGGGTCCTTGGGGACAGAAG+AGG | 0.623355 | 4_1:-26130662 | None:intergenic |
| TCGAGTCATCGAGGCAGGAG+CGG | 0.624226 | 4_1:-26130583 | None:intergenic |
| GTGAATTGCTGCATTCATTG+GGG | 0.625841 | 4_1:-26130455 | None:intergenic |
| CACTTTCCTGGACATAACAG+AGG | 0.631168 | 4_1:+26130555 | Msa0542020:CDS |
| ATGCACTAACTAAAGGAGGT+AGG | 0.636092 | 4_1:-26130497 | None:intergenic |
| TAACTGAATGCCAGAAATGG+CGG | 0.637801 | 4_1:+26132284 | Msa0542020:three_prime_UTR |
| TGAGCTTCATCAACAATCAG+AGG | 0.639277 | 4_1:-26131323 | None:intergenic |
| GCTTCTAATATGGGTCCTTG+GGG | 0.641541 | 4_1:-26130672 | None:intergenic |
| AACAGTACAGTCTACTCACA+AGG | 0.650174 | 4_1:+26131409 | Msa0542020:CDS |
| ACCTGTATTGATCCCCGGTG+AGG | 0.653105 | 4_1:+26132078 | Msa0542020:CDS |
| GAGACCTGAGAGGAATAAGA+CGG | 0.653253 | 4_1:-26129312 | None:intergenic |
| ACAACTATAGAAGAAAGTAA+GGG | 0.663858 | 4_1:-26132175 | None:intergenic |
| AAGCAGGTAACTAGGACTTG+TGG | 0.664545 | 4_1:-26131525 | None:intergenic |
| TCACCAGAGCTTCAGCAGAG+TGG | 0.667500 | 4_1:+26130474 | Msa0542020:CDS |
| GAGCATTGGTAAGGTTTCGG+GGG | 0.674611 | 4_1:+26132027 | Msa0542020:CDS |
| TCCAATGAGTCGAGTCATCG+AGG | 0.679421 | 4_1:-26130592 | None:intergenic |
| TCACTAGACAAAATTCAGTG+TGG | 0.688472 | 4_1:-26132355 | None:intergenic |
| AGAAATGAAGGAGACCTGAG+AGG | 0.688557 | 4_1:-26129322 | None:intergenic |
| CACTGCACCGGATAATACCA+TGG | 0.689114 | 4_1:-26130847 | None:intergenic |
| ATCAATACAGGTATACCTGG+AGG | 0.690812 | 4_1:-26132067 | None:intergenic |
| TGGGTTATCAGGTTACGAAG+CGG | 0.691347 | 4_1:+26131742 | Msa0542020:CDS |
| AATGATTGGGACATCGCTGG+TGG | 0.722880 | 4_1:+26130897 | Msa0542020:CDS |
| AATACCATGAAACTGTGAGG+TGG | 0.768144 | 4_1:-26132503 | None:intergenic |
| TGAAATACCATGAAACTGTG+AGG | 0.799173 | 4_1:-26132506 | None:intergenic |
| TCTCAGTAATAACCTCACCG+GGG | 0.800637 | 4_1:-26132090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATTTCTAATCATAT+AGG | - | chr4_1:26129971-26129990 | None:intergenic | 10.0% |
| !! | AAATATTTAAATATCCAATA+AGG | - | chr4_1:26132472-26132491 | None:intergenic | 10.0% |
| !! | TTATTGGATATTTAAATATT+TGG | + | chr4_1:26132471-26132490 | Msa0542020:three_prime_UTR | 10.0% |
| !!! | GTATTTAAAATAAGAAATGA+AGG | - | chr4_1:26129337-26129356 | None:intergenic | 15.0% |
| !!! | CATTTTTTTCAAATTATCAT+CGG | - | chr4_1:26129735-26129754 | None:intergenic | 15.0% |
| !! | ATATAATTTAGTGTAATCAT+AGG | + | chr4_1:26129755-26129774 | Msa0542020:intron | 15.0% |
| !!! | AATTTTTAATGTAGTTTAGT+TGG | + | chr4_1:26130023-26130042 | Msa0542020:intron | 15.0% |
| !!! | ATTTTTAATGTAGTTTAGTT+GGG | + | chr4_1:26130024-26130043 | Msa0542020:intron | 15.0% |
| !! | TAGATAAAGAAAAAATATCT+AGG | + | chr4_1:26131483-26131502 | Msa0542020:CDS | 15.0% |
| !! | AAACACATACATATGATAAA+CGG | - | chr4_1:26129406-26129425 | None:intergenic | 20.0% |
| !!! | TTTTTAATGTAGTTTAGTTG+GGG | + | chr4_1:26130025-26130044 | Msa0542020:intron | 20.0% |
| !!! | ACAACATTTCATTTTAATTC+AGG | - | chr4_1:26130266-26130285 | None:intergenic | 20.0% |
| !! | TATTATACACTATCACAATT+TGG | + | chr4_1:26130949-26130968 | Msa0542020:intron | 20.0% |
| !! | TAAAAGAAAAGTAACGATAA+AGG | + | chr4_1:26132003-26132022 | Msa0542020:CDS | 20.0% |
| !! | TTTATCAATTATTATGAGAC+CGG | - | chr4_1:26132223-26132242 | None:intergenic | 20.0% |
| !!! | TAGATTTTCTCTAATTTGAA+TGG | + | chr4_1:26132317-26132336 | Msa0542020:three_prime_UTR | 20.0% |
| !! | GTATGTGTTTCTGTATATAT+AGG | + | chr4_1:26129554-26129573 | Msa0542020:intron | 25.0% |
| !! | ATATCTTTTTACCTTAGTCT+TGG | - | chr4_1:26129921-26129940 | None:intergenic | 25.0% |
| ! | AAGACTAAGGTAAAAAGATA+TGG | + | chr4_1:26129920-26129939 | Msa0542020:intron | 25.0% |
| ! | AGACTAAGGTAAAAAGATAT+GGG | + | chr4_1:26129921-26129940 | Msa0542020:intron | 25.0% |
| ! | TTGTGTATAATACACCAAAA+TGG | - | chr4_1:26130122-26130141 | None:intergenic | 25.0% |
| ! | TTCCTGACTATAAAAATGAT+TGG | + | chr4_1:26130883-26130902 | Msa0542020:CDS | 25.0% |
| ! | TCCTGACTATAAAAATGATT+GGG | + | chr4_1:26130884-26130903 | Msa0542020:CDS | 25.0% |
| !! | TGGCTATATTCTCTAAAAAT+TGG | + | chr4_1:26130969-26130988 | Msa0542020:intron | 25.0% |
| ! | AGTAAGAAAATCATGTAATC+AGG | - | chr4_1:26131051-26131070 | None:intergenic | 25.0% |
| ! | AATATCTAATATCATTGTCG+AGG | - | chr4_1:26131076-26131095 | None:intergenic | 25.0% |
| ! | ACAACTATAGAAGAAAGTAA+GGG | - | chr4_1:26132178-26132197 | None:intergenic | 25.0% |
| !!! | ATATCAAAAGCATTGAAATC+TGG | - | chr4_1:26132388-26132407 | None:intergenic | 25.0% |
| !! | AGATTTCAATGCTTTTGATA+TGG | + | chr4_1:26132387-26132406 | Msa0542020:three_prime_UTR | 25.0% |
| !! | TGTTTAAAATGACTCCTTAT+TGG | + | chr4_1:26132455-26132474 | Msa0542020:three_prime_UTR | 25.0% |
| ! | AAGCTACAATTTGTAACTTT+CGG | - | chr4_1:26132542-26132561 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTGGGATTGAAA+GGG | - | chr4_1:26129144-26129163 | None:intergenic | 30.0% |
| !!! | TTTGGATTTTTGGGATTGAA+AGG | - | chr4_1:26129145-26129164 | None:intergenic | 30.0% |
| TCAATCCCAAAAATCCAAAA+CGG | + | chr4_1:26129146-26129165 | Msa0542020:CDS | 30.0% | |
| !! | GAAAACCGTTTTGGATTTTT+GGG | - | chr4_1:26129154-26129173 | None:intergenic | 30.0% |
| !! | TGAAAACCGTTTTGGATTTT+TGG | - | chr4_1:26129155-26129174 | None:intergenic | 30.0% |
| GTTAGCACTTACTGAAAAAT+GGG | - | chr4_1:26129182-26129201 | None:intergenic | 30.0% | |
| ! | TTCCTTTTCTGTTTATTTGC+AGG | + | chr4_1:26129248-26129267 | Msa0542020:intron | 30.0% |
| ! | TCCTTTTCTGTTTATTTGCA+GGG | + | chr4_1:26129249-26129268 | Msa0542020:intron | 30.0% |
| TAATAGCTTATGTACACGTT+TGG | + | chr4_1:26129363-26129382 | Msa0542020:intron | 30.0% | |
| AATAGCTTATGTACACGTTT+GGG | + | chr4_1:26129364-26129383 | Msa0542020:intron | 30.0% | |
| ! | AATCAGCTGAAAACAACTTT+TGG | + | chr4_1:26129658-26129677 | Msa0542020:intron | 30.0% |
| TTTCAAATTATCATCGGTGT+TGG | - | chr4_1:26129729-26129748 | None:intergenic | 30.0% | |
| ! | GGGTAATAAGATTAGCTAAA+GGG | + | chr4_1:26130045-26130064 | Msa0542020:intron | 30.0% |
| GTATAATACACCAAAATGGT+CGG | - | chr4_1:26130118-26130137 | None:intergenic | 30.0% | |
| TCTGTTTGTGCTTCTAATAT+GGG | - | chr4_1:26130684-26130703 | None:intergenic | 30.0% | |
| TTCTGTTTGTGCTTCTAATA+TGG | - | chr4_1:26130685-26130704 | None:intergenic | 30.0% | |
| ! | TCCTCGAAATTGTCATTTAT+CGG | + | chr4_1:26130815-26130834 | Msa0542020:CDS | 30.0% |
| ! | TTGTCATTTATCGGCTATAT+CGG | + | chr4_1:26130824-26130843 | Msa0542020:CDS | 30.0% |
| !! | TCCCAATCATTTTTATAGTC+AGG | - | chr4_1:26130888-26130907 | None:intergenic | 30.0% |
| AATAACTGAATCACCTGTAA+TGG | - | chr4_1:26130930-26130949 | None:intergenic | 30.0% | |
| GAAAGAGAACAACATTAGAT+AGG | - | chr4_1:26131126-26131145 | None:intergenic | 30.0% | |
| ! | TTTCTTTCTTTCTTTTCCTG+TGG | + | chr4_1:26131156-26131175 | Msa0542020:intron | 30.0% |
| ! | CAACAATCAGAGGAATTTTA+CGG | - | chr4_1:26131316-26131335 | None:intergenic | 30.0% |
| ! | CATTTGCTAATTTAATCGCT+TGG | - | chr4_1:26131610-26131629 | None:intergenic | 30.0% |
| AAGCGGATGAAATCTTATAT+CGG | + | chr4_1:26131759-26131778 | Msa0542020:CDS | 30.0% | |
| GAAATCTTATATCGGGATTT+CGG | + | chr4_1:26131767-26131786 | Msa0542020:CDS | 30.0% | |
| ATCACTTATGCACTTAATCT+TGG | + | chr4_1:26131821-26131840 | Msa0542020:CDS | 30.0% | |
| ACTTAATCTTGGAACTTGTA+GGG | + | chr4_1:26131832-26131851 | Msa0542020:CDS | 30.0% | |
| CTCGTGATTATATCATCAAA+GGG | - | chr4_1:26131953-26131972 | None:intergenic | 30.0% | |
| TACATGGAGTAGATAATTGA+CGG | - | chr4_1:26132119-26132138 | None:intergenic | 30.0% | |
| GACAACTATAGAAGAAAGTA+AGG | - | chr4_1:26132179-26132198 | None:intergenic | 30.0% | |
| TTGATATGGTTCAGAATCAT+TGG | + | chr4_1:26132401-26132420 | Msa0542020:three_prime_UTR | 30.0% | |
| GTAGGAAAAGTGGAAGAAAA+TGG | + | chr4_1:26129078-26129097 | Msa0542020:exon | 35.0% | |
| !!! | TGGATTTTTGGGATTGAAAG+GGG | - | chr4_1:26129143-26129162 | None:intergenic | 35.0% |
| GGTTAGCACTTACTGAAAAA+TGG | - | chr4_1:26129183-26129202 | None:intergenic | 35.0% | |
| AGAAGAAGAAAGAGAGATTG+TGG | - | chr4_1:26129204-26129223 | None:intergenic | 35.0% | |
| TCCCTGCAAATAAACAGAAA+AGG | - | chr4_1:26129253-26129272 | None:intergenic | 35.0% | |
| !! | ATGTGTTTTTGTAACCCACT+TGG | + | chr4_1:26129418-26129437 | Msa0542020:intron | 35.0% |
| !! | TGTGTTTTTGTAACCCACTT+GGG | + | chr4_1:26129419-26129438 | Msa0542020:intron | 35.0% |
| CTAAATTAGCCCACCTAAAT+TGG | - | chr4_1:26129519-26129538 | None:intergenic | 35.0% | |
| !! | GCTGTTTTCATAAGCTATTC+TGG | + | chr4_1:26129623-26129642 | Msa0542020:intron | 35.0% |
| TAAACACTTGTGAGACTGTT+TGG | - | chr4_1:26129846-26129865 | None:intergenic | 35.0% | |
| ATGGGCGTAAAATTGATCTT+TGG | + | chr4_1:26129939-26129958 | Msa0542020:intron | 35.0% | |
| ! | GGGGTAATAAGATTAGCTAA+AGG | + | chr4_1:26130044-26130063 | Msa0542020:intron | 35.0% |
| CTTGTGTAAAAAACAGGGTA+AGG | - | chr4_1:26130145-26130164 | None:intergenic | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | chr4_1:26130145-26130164 | Msa0542020:intron | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | - | chr4_1:26130150-26130169 | None:intergenic | 35.0% | |
| TAGCTAATCTTATTACCCGA+GGG | - | chr4_1:26130241-26130260 | None:intergenic | 35.0% | |
| TCATAATGAGGCAGTACTAA+TGG | - | chr4_1:26130293-26130312 | None:intergenic | 35.0% | |
| GGATAGTGTATGTCATAATG+AGG | - | chr4_1:26130305-26130324 | None:intergenic | 35.0% | |
| TACACTATCCTTCATTGCAA+TGG | + | chr4_1:26130315-26130334 | Msa0542020:intron | 35.0% | |
| ACACTATCCTTCATTGCAAT+GGG | + | chr4_1:26130316-26130335 | Msa0542020:intron | 35.0% | |
| TTCAATGCACTAACTAAAGG+AGG | - | chr4_1:26130504-26130523 | None:intergenic | 35.0% | |
| GCTTTCAATGCACTAACTAA+AGG | - | chr4_1:26130507-26130526 | None:intergenic | 35.0% | |
| CTCTGATGATCCAAACAATT+TGG | - | chr4_1:26130712-26130731 | None:intergenic | 35.0% | |
| GGAAGAATAAGAAATTCTCC+TGG | - | chr4_1:26130798-26130817 | None:intergenic | 35.0% | |
| TAGTCAGGAACAATGTACTT+AGG | - | chr4_1:26130873-26130892 | None:intergenic | 35.0% | |
| ! | TTTCTTTCTTTTCCTGTGGT+TGG | + | chr4_1:26131160-26131179 | Msa0542020:intron | 35.0% |
| ATCACTTCACCTACTTATCA+TGG | + | chr4_1:26131248-26131267 | Msa0542020:CDS | 35.0% | |
| CTGCAAATACCATGATAAGT+AGG | - | chr4_1:26131260-26131279 | None:intergenic | 35.0% | |
| CTTGGTTGAATACAGTATCA+GGG | - | chr4_1:26131592-26131611 | None:intergenic | 35.0% | |
| AGCGGATGAAATCTTATATC+GGG | + | chr4_1:26131760-26131779 | Msa0542020:CDS | 35.0% | |
| GAATTGTTTGTGAACTCGTT+GGG | + | chr4_1:26131789-26131808 | Msa0542020:CDS | 35.0% | |
| CACTTAATCTTGGAACTTGT+AGG | + | chr4_1:26131831-26131850 | Msa0542020:CDS | 35.0% | |
| TTATTCCCGATAAAAGCCTT+TGG | - | chr4_1:26131865-26131884 | None:intergenic | 35.0% | |
| GCTCGTGATTATATCATCAA+AGG | - | chr4_1:26131954-26131973 | None:intergenic | 35.0% | |
| TTGCAAAAAATGCATCTCTG+GGG | - | chr4_1:26131982-26132001 | None:intergenic | 35.0% | |
| CTTGCAAAAAATGCATCTCT+GGG | - | chr4_1:26131983-26132002 | None:intergenic | 35.0% | |
| ACTTGCAAAAAATGCATCTC+TGG | - | chr4_1:26131984-26132003 | None:intergenic | 35.0% | |
| CGATGTACATAAAAAACAGC+CGG | + | chr4_1:26132201-26132220 | Msa0542020:CDS | 35.0% | |
| ACACAGCTGAAGAAATTCTT+AGG | + | chr4_1:26132249-26132268 | Msa0542020:three_prime_UTR | 35.0% | |
| AACTAACTGAATGCCAGAAA+TGG | + | chr4_1:26132281-26132300 | Msa0542020:three_prime_UTR | 35.0% | |
| TCACTAGACAAAATTCAGTG+TGG | - | chr4_1:26132358-26132377 | None:intergenic | 35.0% | |
| TGAAATACCATGAAACTGTG+AGG | - | chr4_1:26132509-26132528 | None:intergenic | 35.0% | |
| AGCATGAATGGTAGGAAAAG+TGG | + | chr4_1:26129068-26129087 | Msa0542020:five_prime_UTR | 40.0% | |
| GCACTTACTGAAAAATGGGA+AGG | - | chr4_1:26129178-26129197 | None:intergenic | 40.0% | |
| GTCCTTACAAATGGAAGTTC+AGG | + | chr4_1:26129274-26129293 | Msa0542020:CDS | 40.0% | |
| GTCCTGAACTTCCATTTGTA+AGG | - | chr4_1:26129279-26129298 | None:intergenic | 40.0% | |
| ACGTTCTAACGAAGACTGTT+TGG | - | chr4_1:26129898-26129917 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | - | chr4_1:26130151-26130170 | None:intergenic | 40.0% | |
| ATTGTGGTCATCTGACTGAA+AGG | - | chr4_1:26130196-26130215 | None:intergenic | 40.0% | |
| AGCTAATCTTATTACCCGAG+GGG | - | chr4_1:26130240-26130259 | None:intergenic | 40.0% | |
| CTAGCTAATCTTATTACCCG+AGG | - | chr4_1:26130242-26130261 | None:intergenic | 40.0% | |
| ! | CTCGGGTAATAAGATTAGCT+AGG | + | chr4_1:26130240-26130259 | Msa0542020:intron | 40.0% |
| GACAAAACCCATTGCAATGA+AGG | - | chr4_1:26130326-26130345 | None:intergenic | 40.0% | |
| !! | TCATTGCAATGGGTTTTGTC+AGG | + | chr4_1:26130326-26130345 | Msa0542020:intron | 40.0% |
| CTCTCGTATTTCCCATATTC+TGG | - | chr4_1:26130399-26130418 | None:intergenic | 40.0% | |
| GTGAATTGCTGCATTCATTG+GGG | - | chr4_1:26130458-26130477 | None:intergenic | 40.0% | |
| GGTGAATTGCTGCATTCATT+GGG | - | chr4_1:26130459-26130478 | None:intergenic | 40.0% | |
| TGGTGAATTGCTGCATTCAT+TGG | - | chr4_1:26130460-26130479 | None:intergenic | 40.0% | |
| ATGCACTAACTAAAGGAGGT+AGG | - | chr4_1:26130500-26130519 | None:intergenic | 40.0% | |
| ATGTCCAGGAAAGTGAAAAG+TGG | - | chr4_1:26130550-26130569 | None:intergenic | 40.0% | |
| TCGGGTAAATCATGAGCATA+TGG | - | chr4_1:26130624-26130643 | None:intergenic | 40.0% | |
| TGCTTCTAATATGGGTCCTT+GGG | - | chr4_1:26130676-26130695 | None:intergenic | 40.0% | |
| ACAGAAGCAGCCAAATTGTT+TGG | + | chr4_1:26130699-26130718 | Msa0542020:CDS | 40.0% | |
| TGTTTGGATCATCAGAGACA+TGG | + | chr4_1:26130715-26130734 | Msa0542020:CDS | 40.0% | |
| TCAGAGACATGGTTTCTTGT+CGG | + | chr4_1:26130726-26130745 | Msa0542020:CDS | 40.0% | |
| AAGAAATTCTCCTGGTGAAC+AGG | - | chr4_1:26130790-26130809 | None:intergenic | 40.0% | |
| GCCGATAAATGACAATTTCG+AGG | - | chr4_1:26130819-26130838 | None:intergenic | 40.0% | |
| ATATCGGCCATGGTATTATC+CGG | + | chr4_1:26130840-26130859 | Msa0542020:CDS | 40.0% | |
| AAAAATGATTGGGACATCGC+TGG | + | chr4_1:26130894-26130913 | Msa0542020:CDS | 40.0% | |
| TGAGCTTCATCAACAATCAG+AGG | - | chr4_1:26131326-26131345 | None:intergenic | 40.0% | |
| ! | CTGATTGTTGATGAAGCTCA+CGG | + | chr4_1:26131326-26131345 | Msa0542020:CDS | 40.0% |
| AACAGTACAGTCTACTCACA+AGG | + | chr4_1:26131409-26131428 | Msa0542020:CDS | 40.0% | |
| ! | AAGTCCTAGTTACCTGCTTT+TGG | + | chr4_1:26131529-26131548 | Msa0542020:CDS | 40.0% |
| TTGAGATCTAGCAGCATCTA+GGG | - | chr4_1:26131558-26131577 | None:intergenic | 40.0% | |
| GCTTGGTTGAATACAGTATC+AGG | - | chr4_1:26131593-26131612 | None:intergenic | 40.0% | |
| TGCTCTCTTAAACAATTCCC+TGG | + | chr4_1:26131638-26131657 | Msa0542020:CDS | 40.0% | |
| CAATGGATCAATTGCAGGAA+TGG | - | chr4_1:26131696-26131715 | None:intergenic | 40.0% | |
| TTCCTGCAATTGATCCATTG+CGG | + | chr4_1:26131696-26131715 | Msa0542020:CDS | 40.0% | |
| GGAATTGTTTGTGAACTCGT+TGG | + | chr4_1:26131788-26131807 | Msa0542020:CDS | 40.0% | |
| ! | CCATGTCCAAAGGCTTTTAT+CGG | + | chr4_1:26131856-26131875 | Msa0542020:CDS | 40.0% |
| ! | CATGTCCAAAGGCTTTTATC+GGG | + | chr4_1:26131857-26131876 | Msa0542020:CDS | 40.0% |
| !! | TCTTTAGGTTGCTGAATGGA+AGG | - | chr4_1:26131908-26131927 | None:intergenic | 40.0% |
| TCCATTCAGCAACCTAAAGA+CGG | + | chr4_1:26131908-26131927 | Msa0542020:CDS | 40.0% | |
| TCAGTAAGTACTCCGTCTTT+AGG | - | chr4_1:26131923-26131942 | None:intergenic | 40.0% | |
| TGCAAAAAATGCATCTCTGG+GGG | - | chr4_1:26131981-26132000 | None:intergenic | 40.0% | |
| ! | GTAACGATAAAGGAGAGCAT+TGG | + | chr4_1:26132013-26132032 | Msa0542020:CDS | 40.0% |
| !! | GATAAAGGAGAGCATTGGTA+AGG | + | chr4_1:26132018-26132037 | Msa0542020:CDS | 40.0% |
| CTTATTTGTCCATATCCTCC+AGG | + | chr4_1:26132052-26132071 | Msa0542020:CDS | 40.0% | |
| ATCAATACAGGTATACCTGG+AGG | - | chr4_1:26132070-26132089 | None:intergenic | 40.0% | |
| TCTCTCAGTAATAACCTCAC+CGG | - | chr4_1:26132095-26132114 | None:intergenic | 40.0% | |
| CTACTCCATGTAAGAAGTGA+AGG | + | chr4_1:26132127-26132146 | Msa0542020:CDS | 40.0% | |
| !! | AGTGAAGGTGCTGATATTAG+TGG | + | chr4_1:26132142-26132161 | Msa0542020:CDS | 40.0% |
| TAACTGAATGCCAGAAATGG+CGG | + | chr4_1:26132284-26132303 | Msa0542020:three_prime_UTR | 40.0% | |
| AATACCATGAAACTGTGAGG+TGG | - | chr4_1:26132506-26132525 | None:intergenic | 40.0% | |
| ! | TGGGAAGGTGAAAACCGTTT+TGG | - | chr4_1:26129163-26129182 | None:intergenic | 45.0% |
| ! | GATTCCGTCTTATTCCTCTC+AGG | + | chr4_1:26129308-26129327 | Msa0542020:CDS | 45.0% |
| GAGACCTGAGAGGAATAAGA+CGG | - | chr4_1:26129315-26129334 | None:intergenic | 45.0% | |
| AGAAATGAAGGAGACCTGAG+AGG | - | chr4_1:26129325-26129344 | None:intergenic | 45.0% | |
| TCAAACTTGAGACCTCGAGT+AGG | - | chr4_1:26129484-26129503 | None:intergenic | 45.0% | |
| ATTCTCCCCAGTGCCAATTT+AGG | + | chr4_1:26129503-26129522 | Msa0542020:intron | 45.0% | |
| ACATGATGAAGCACAGACAC+CGG | + | chr4_1:26129681-26129700 | Msa0542020:intron | 45.0% | |
| ! | TGTAATCATAGGCGTCGTGT+CGG | + | chr4_1:26129766-26129785 | Msa0542020:intron | 45.0% |
| GAGACTGTTTGGAGAGCTTA+TGG | - | chr4_1:26129835-26129854 | None:intergenic | 45.0% | |
| CGTTAGAACGTCCAAGACTA+AGG | + | chr4_1:26129907-26129926 | Msa0542020:intron | 45.0% | |
| TTGGCGCAACGGTAAAATTG+TGG | - | chr4_1:26130212-26130231 | None:intergenic | 45.0% | |
| ! | ACAATTTTACCGTTGCGCCA+AGG | + | chr4_1:26130211-26130230 | Msa0542020:intron | 45.0% |
| AGCATTGCACTGCCAGAATA+TGG | + | chr4_1:26130384-26130403 | Msa0542020:CDS | 45.0% | |
| GCATTGCACTGCCAGAATAT+GGG | + | chr4_1:26130385-26130404 | Msa0542020:CDS | 45.0% | |
| ! | TATGGGAAATACGAGAGCGT+TGG | + | chr4_1:26130402-26130421 | Msa0542020:CDS | 45.0% |
| !! | ATGGGAAATACGAGAGCGTT+GGG | + | chr4_1:26130403-26130422 | Msa0542020:CDS | 45.0% |
| CACTTTCCTGGACATAACAG+AGG | + | chr4_1:26130555-26130574 | Msa0542020:CDS | 45.0% | |
| TTGTCAAGTTCAGGAAGCTC+GGG | - | chr4_1:26130642-26130661 | None:intergenic | 45.0% | |
| GTTGTCAAGTTCAGGAAGCT+CGG | - | chr4_1:26130643-26130662 | None:intergenic | 45.0% | |
| CAGAAGAGGTTGTCAAGTTC+AGG | - | chr4_1:26130651-26130670 | None:intergenic | 45.0% | |
| GCTTCTAATATGGGTCCTTG+GGG | - | chr4_1:26130675-26130694 | None:intergenic | 45.0% | |
| GTGCTTCTAATATGGGTCCT+TGG | - | chr4_1:26130677-26130696 | None:intergenic | 45.0% | |
| !! | TTGTCGGAGGTACTACTTGT+GGG | + | chr4_1:26130742-26130761 | Msa0542020:CDS | 45.0% |
| ATAATGGCAACCTGTTCACC+AGG | + | chr4_1:26130777-26130796 | Msa0542020:CDS | 45.0% | |
| ! | TTTATCGGCTATATCGGCCA+TGG | + | chr4_1:26130830-26130849 | Msa0542020:CDS | 45.0% |
| ! | AATGTACTTAGGCACTGCAC+CGG | - | chr4_1:26130862-26130881 | None:intergenic | 45.0% |
| GTCTTCAGACTCGACTCTTA+AGG | + | chr4_1:26131096-26131115 | Msa0542020:intron | 45.0% | |
| TGCTATCCAGGAACTCGAAT+TGG | + | chr4_1:26131199-26131218 | Msa0542020:CDS | 45.0% | |
| ATCCAGGAACTCGAATTGGA+AGG | + | chr4_1:26131203-26131222 | Msa0542020:CDS | 45.0% | |
| ! | TTCCTTCCAATTCGAGTTCC+TGG | - | chr4_1:26131208-26131227 | None:intergenic | 45.0% |
| TCATCTATGCTGCACATGTC+AGG | + | chr4_1:26131452-26131471 | Msa0542020:CDS | 45.0% | |
| ! | GACTTGTGGTTTGGAGAGTT+TGG | - | chr4_1:26131514-26131533 | None:intergenic | 45.0% |
| GGTAACTAGGACTTGTGGTT+TGG | - | chr4_1:26131523-26131542 | None:intergenic | 45.0% | |
| AAGCAGGTAACTAGGACTTG+TGG | - | chr4_1:26131528-26131547 | None:intergenic | 45.0% | |
| GATGCCAAAAGCAGGTAACT+AGG | - | chr4_1:26131536-26131555 | None:intergenic | 45.0% | |
| GTTGAGATCTAGCAGCATCT+AGG | - | chr4_1:26131559-26131578 | None:intergenic | 45.0% | |
| GGATCAATTGCAGGAATGGT+CGG | - | chr4_1:26131692-26131711 | None:intergenic | 45.0% | |
| AAACCAACAGTAAGCCGCAA+TGG | - | chr4_1:26131713-26131732 | None:intergenic | 45.0% | |
| !!! | TGCGGCTTACTGTTGGTTTT+TGG | + | chr4_1:26131714-26131733 | Msa0542020:CDS | 45.0% |
| !!! | GCGGCTTACTGTTGGTTTTT+GGG | + | chr4_1:26131715-26131734 | Msa0542020:CDS | 45.0% |
| !!! | ACTGTTGGTTTTTGGGAGCT+TGG | + | chr4_1:26131722-26131741 | Msa0542020:CDS | 45.0% |
| !!! | CTGTTGGTTTTTGGGAGCTT+GGG | + | chr4_1:26131723-26131742 | Msa0542020:CDS | 45.0% |
| !! | TTTTGGGAGCTTGGGTTATC+AGG | + | chr4_1:26131731-26131750 | Msa0542020:CDS | 45.0% |
| TGGGTTATCAGGTTACGAAG+CGG | + | chr4_1:26131742-26131761 | Msa0542020:CDS | 45.0% | |
| CCGATAAAAGCCTTTGGACA+TGG | - | chr4_1:26131859-26131878 | None:intergenic | 45.0% | |
| !! | TCCGTCTTTAGGTTGCTGAA+TGG | - | chr4_1:26131912-26131931 | None:intergenic | 45.0% |
| !! | GGAGAGCATTGGTAAGGTTT+CGG | + | chr4_1:26132024-26132043 | Msa0542020:CDS | 45.0% |
| !! | GAGAGCATTGGTAAGGTTTC+GGG | + | chr4_1:26132025-26132044 | Msa0542020:CDS | 45.0% |
| !! | AGAGCATTGGTAAGGTTTCG+GGG | + | chr4_1:26132026-26132045 | Msa0542020:CDS | 45.0% |
| ACAGGTATACCTGGAGGATA+TGG | - | chr4_1:26132064-26132083 | None:intergenic | 45.0% | |
| GGGATCAATACAGGTATACC+TGG | - | chr4_1:26132073-26132092 | None:intergenic | 45.0% | |
| ! | GGTATACCTGTATTGATCCC+CGG | + | chr4_1:26132073-26132092 | Msa0542020:CDS | 45.0% |
| TCTCAGTAATAACCTCACCG+GGG | - | chr4_1:26132093-26132112 | None:intergenic | 45.0% | |
| CTCTCAGTAATAACCTCACC+GGG | - | chr4_1:26132094-26132113 | None:intergenic | 45.0% | |
| CAGCACCTTCACTTCTTACA+TGG | - | chr4_1:26132135-26132154 | None:intergenic | 45.0% | |
| TGCAGGGACGTCCTTACAAA+TGG | + | chr4_1:26129265-26129284 | Msa0542020:intron | 50.0% | |
| !! | TGCTCTGGTGGTATTGGCTT+GGG | + | chr4_1:26129443-26129462 | Msa0542020:intron | 50.0% |
| TCCCCAGTGCCAATTTAGGT+GGG | + | chr4_1:26129507-26129526 | Msa0542020:intron | 50.0% | |
| AGCCCACCTAAATTGGCACT+GGG | - | chr4_1:26129512-26129531 | None:intergenic | 50.0% | |
| TAGCCCACCTAAATTGGCAC+TGG | - | chr4_1:26129513-26129532 | None:intergenic | 50.0% | |
| ! | GTTGGTGTCTATGTCGTGTC+CGG | - | chr4_1:26129703-26129722 | None:intergenic | 50.0% |
| !! | TATCATCGGTGTTGGCGTGT+TGG | - | chr4_1:26129721-26129740 | None:intergenic | 50.0% |
| ! | GGCAGCATTTTCTTCAGCTG+AGG | - | chr4_1:26130529-26130548 | None:intergenic | 50.0% |
| !!! | GCTGCCACTTTTCACTTTCC+TGG | + | chr4_1:26130543-26130562 | Msa0542020:CDS | 50.0% |
| TCCAATGAGTCGAGTCATCG+AGG | - | chr4_1:26130595-26130614 | None:intergenic | 50.0% | |
| GAGACATGGTTTCTTGTCGG+AGG | + | chr4_1:26130729-26130748 | Msa0542020:CDS | 50.0% | |
| !! | CTTGTCGGAGGTACTACTTG+TGG | + | chr4_1:26130741-26130760 | Msa0542020:CDS | 50.0% |
| AGGTACTACTTGTGGGATCC+AGG | + | chr4_1:26130749-26130768 | Msa0542020:CDS | 50.0% | |
| TGGGATCCAGGCAGCAATAA+TGG | + | chr4_1:26130761-26130780 | Msa0542020:CDS | 50.0% | |
| AGGTTGCCATTATTGCTGCC+TGG | - | chr4_1:26130770-26130789 | None:intergenic | 50.0% | |
| CACTGCACCGGATAATACCA+TGG | - | chr4_1:26130850-26130869 | None:intergenic | 50.0% | |
| AATGATTGGGACATCGCTGG+TGG | + | chr4_1:26130897-26130916 | Msa0542020:CDS | 50.0% | |
| !! | TGGTGGTGTCACTCCATTAC+AGG | + | chr4_1:26130914-26130933 | Msa0542020:CDS | 50.0% |
| !! | TTTCCTGTGGTTGGTGTTGC+AGG | + | chr4_1:26131169-26131188 | Msa0542020:intron | 50.0% |
| ATACCTGCAACACCAACCAC+AGG | - | chr4_1:26131175-26131194 | None:intergenic | 50.0% | |
| !! | GCAGGTATTGAGTGCTATCC+AGG | + | chr4_1:26131187-26131206 | Msa0542020:intron | 50.0% |
| CATCTAGGGATGCCAAAAGC+AGG | - | chr4_1:26131544-26131563 | None:intergenic | 50.0% | |
| !! | TCTCAAGCACTGAGATGCCA+GGG | - | chr4_1:26131658-26131677 | None:intergenic | 50.0% |
| !! | TTCTCAAGCACTGAGATGCC+AGG | - | chr4_1:26131659-26131678 | None:intergenic | 50.0% |
| AGCCGCAATGGATCAATTGC+AGG | - | chr4_1:26131701-26131720 | None:intergenic | 50.0% | |
| GATCCATTGCGGCTTACTGT+TGG | + | chr4_1:26131707-26131726 | Msa0542020:CDS | 50.0% | |
| CTTGTAGGGACCATGTCCAA+AGG | + | chr4_1:26131846-26131865 | Msa0542020:CDS | 50.0% | |
| !! | GAGCATTGGTAAGGTTTCGG+GGG | + | chr4_1:26132027-26132046 | Msa0542020:CDS | 50.0% |
| CCAACATCAACCGCCATTTC+TGG | - | chr4_1:26132297-26132316 | None:intergenic | 50.0% | |
| ! | CCAGAAATGGCGGTTGATGT+TGG | + | chr4_1:26132294-26132313 | Msa0542020:three_prime_UTR | 50.0% |
| ACCATGAAACTGTGAGGTGG+CGG | - | chr4_1:26132503-26132522 | None:intergenic | 50.0% | |
| TTGAAAGGGGACGACGAGAG+TGG | - | chr4_1:26129130-26129149 | None:intergenic | 55.0% | |
| TTGGGCTGCTCTGGTGGTAT+TGG | + | chr4_1:26129437-26129456 | Msa0542020:intron | 55.0% | |
| !! | CTGCTCTGGTGGTATTGGCT+TGG | + | chr4_1:26129442-26129461 | Msa0542020:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr4_1:26129450-26129469 | Msa0542020:intron | 55.0% |
| CTCCCCAGTGCCAATTTAGG+TGG | + | chr4_1:26129506-26129525 | Msa0542020:intron | 55.0% | |
| GCCCACCTAAATTGGCACTG+GGG | - | chr4_1:26129511-26129530 | None:intergenic | 55.0% | |
| GCACAGACACTCCTAGACGT+CGG | - | chr4_1:26129801-26129820 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTGTGCATC+AGG | - | chr4_1:26130074-26130093 | None:intergenic | 55.0% |
| ACAAAGCTCCCGCATACGCA+GGG | + | chr4_1:26130079-26130098 | Msa0542020:intron | 55.0% | |
| AAAATGGTCGGACCCCTTCC+CGG | - | chr4_1:26130106-26130125 | None:intergenic | 55.0% | |
| TATTACCCGAGGGGAAGCCT+TGG | - | chr4_1:26130231-26130250 | None:intergenic | 55.0% | |
| TCACCAGAGCTTCAGCAGAG+TGG | + | chr4_1:26130474-26130493 | Msa0542020:CDS | 55.0% | |
| GCATGGCCTCTGTTATGTCC+AGG | - | chr4_1:26130564-26130583 | None:intergenic | 55.0% | |
| ATGAGTCGAGTCATCGAGGC+AGG | - | chr4_1:26130591-26130610 | None:intergenic | 55.0% | |
| GCCTCGATGACTCGACTCAT+TGG | + | chr4_1:26130591-26130610 | Msa0542020:CDS | 55.0% | |
| GACAACCTCTTCTGTCCCCA+AGG | + | chr4_1:26130657-26130676 | Msa0542020:CDS | 55.0% | |
| GAAGCTCACGGTGCACATCT+AGG | + | chr4_1:26131338-26131357 | Msa0542020:CDS | 55.0% | |
| TAGATCAGCCCCTTGCTGGA+GGG | - | chr4_1:26131390-26131409 | None:intergenic | 55.0% | |
| TTAGATCAGCCCCTTGCTGG+AGG | - | chr4_1:26131391-26131410 | None:intergenic | 55.0% | |
| CTGTTAGATCAGCCCCTTGC+TGG | - | chr4_1:26131394-26131413 | None:intergenic | 55.0% | |
| ! | ACCTGTATTGATCCCCGGTG+AGG | + | chr4_1:26132078-26132097 | Msa0542020:CDS | 55.0% |
| ACCTCACCGGGGATCAATAC+AGG | - | chr4_1:26132082-26132101 | None:intergenic | 55.0% | |
| ACCGCCACCTCACAGTTTCA+TGG | + | chr4_1:26132499-26132518 | Msa0542020:three_prime_UTR | 55.0% | |
| GTAACCCACTTGGGCTGCTC+TGG | + | chr4_1:26129428-26129447 | Msa0542020:intron | 60.0% | |
| ACCACCAGAGCAGCCCAAGT+GGG | - | chr4_1:26129435-26129454 | None:intergenic | 60.0% | |
| TACCACCAGAGCAGCCCAAG+TGG | - | chr4_1:26129436-26129455 | None:intergenic | 60.0% | |
| !! | GGTGGTATTGGCTTGGGACC+TGG | + | chr4_1:26129449-26129468 | Msa0542020:intron | 60.0% |
| ! | TCGAGTAGGAGCACACTCCC+AGG | - | chr4_1:26129470-26129489 | None:intergenic | 60.0% |
| ! | TGGGAGTGTGCTCCTACTCG+AGG | + | chr4_1:26129469-26129488 | Msa0542020:intron | 60.0% |
| ! | GGTGTCGAACACCGACGTCT+AGG | + | chr4_1:26129787-26129806 | Msa0542020:intron | 60.0% |
| CACAAAGCTCCCGCATACGC+AGG | + | chr4_1:26130078-26130097 | Msa0542020:intron | 60.0% | |
| ! | GGGAAGGGGTCCGACCATTT+TGG | + | chr4_1:26130105-26130124 | Msa0542020:intron | 60.0% |
| AGGCCACTCTGCTGAAGCTC+TGG | - | chr4_1:26130480-26130499 | None:intergenic | 60.0% | |
| TCGAGTCATCGAGGCAGGAG+CGG | - | chr4_1:26130586-26130605 | None:intergenic | 60.0% | |
| TGGGTCCTTGGGGACAGAAG+AGG | - | chr4_1:26130665-26130684 | None:intergenic | 60.0% | |
| CTAGCTCAGCCCTCCAGCAA+GGG | + | chr4_1:26131378-26131397 | Msa0542020:CDS | 60.0% | |
| TAGCTCAGCCCTCCAGCAAG+GGG | + | chr4_1:26131379-26131398 | Msa0542020:CDS | 60.0% | |
| ACCCACTTGGGCTGCTCTGG+TGG | + | chr4_1:26129431-26129450 | Msa0542020:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr4_1:26130090-26130109 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr4_1:26130091-26130110 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr4_1:26130090-26130109 | Msa0542020:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr4_1:26130091-26130110 | Msa0542020:intron | 65.0% | |
| GAGGGGAAGCCTTGGCGCAA+CGG | - | chr4_1:26130223-26130242 | None:intergenic | 65.0% | |
| GTTGCGCCAAGGCTTCCCCT+CGG | + | chr4_1:26130222-26130241 | Msa0542020:intron | 65.0% | |
| TTGCGCCAAGGCTTCCCCTC+GGG | + | chr4_1:26130223-26130242 | Msa0542020:intron | 65.0% | |
| TCATCGAGGCAGGAGCGGCA+TGG | - | chr4_1:26130581-26130600 | None:intergenic | 65.0% | |
| CCTTGCTGGAGGGCTGAGCT+AGG | - | chr4_1:26131380-26131399 | None:intergenic | 65.0% | |
| CCTAGCTCAGCCCTCCAGCA+AGG | + | chr4_1:26131377-26131396 | Msa0542020:CDS | 65.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr4_1:26130084-26130103 | Msa0542020:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr4_1:26130085-26130104 | Msa0542020:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr4_1:26130089-26130108 | Msa0542020:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 26129063 | 26132583 | 26129063 | ID=Msa0542020;Name=Msa0542020 |
| chr4_1 | mRNA | 26129063 | 26132583 | 26129063 | ID=Msa0542020-mRNA-1;Parent=Msa0542020;Name=Msa0542020-mRNA-1;_AED=0.04;_eAED=0.04;_QI=34|1|1|1|1|1|4|352|583 |
| chr4_1 | exon | 26129063 | 26129189 | 26129063 | ID=Msa0542020-mRNA-1:exon:7084;Parent=Msa0542020-mRNA-1 |
| chr4_1 | exon | 26129270 | 26129329 | 26129270 | ID=Msa0542020-mRNA-1:exon:7085;Parent=Msa0542020-mRNA-1 |
| chr4_1 | exon | 26130378 | 26130935 | 26130378 | ID=Msa0542020-mRNA-1:exon:7086;Parent=Msa0542020-mRNA-1 |
| chr4_1 | exon | 26131191 | 26132583 | 26131191 | ID=Msa0542020-mRNA-1:exon:7087;Parent=Msa0542020-mRNA-1 |
| chr4_1 | five_prime_UTR | 26129063 | 26129096 | 26129063 | ID=Msa0542020-mRNA-1:five_prime_utr;Parent=Msa0542020-mRNA-1 |
| chr4_1 | CDS | 26129097 | 26129189 | 26129097 | ID=Msa0542020-mRNA-1:cds;Parent=Msa0542020-mRNA-1 |
| chr4_1 | CDS | 26129270 | 26129329 | 26129270 | ID=Msa0542020-mRNA-1:cds;Parent=Msa0542020-mRNA-1 |
| chr4_1 | CDS | 26130378 | 26130935 | 26130378 | ID=Msa0542020-mRNA-1:cds;Parent=Msa0542020-mRNA-1 |
| chr4_1 | CDS | 26131191 | 26132231 | 26131191 | ID=Msa0542020-mRNA-1:cds;Parent=Msa0542020-mRNA-1 |
| chr4_1 | three_prime_UTR | 26132232 | 26132583 | 26132232 | ID=Msa0542020-mRNA-1:three_prime_utr;Parent=Msa0542020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
