Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692470 | XP_013456762.1 | 98.225 | 507 | 9 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1044 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692470 | sp|Q6NQ51|RRT4_ARATH | 71.881 | 505 | 136 | 2 | 1 | 505 | 1 | 499 | 0.0 | 761 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692470 | A0A072UP41 | 98.225 | 507 | 9 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1044 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0012460 | Msa0692470 | 0.807688 | 4.474130e-50 | -8.615850e-47 |
Msa0017120 | Msa0692470 | 0.821023 | 5.033458e-53 | -8.615850e-47 |
Msa0020630 | Msa0692470 | 0.813344 | 2.684100e-51 | -8.615850e-47 |
Msa0030730 | Msa0692470 | 0.822736 | 2.019114e-53 | -8.615850e-47 |
Msa0037820 | Msa0692470 | 0.805390 | 1.366416e-49 | -8.615850e-47 |
Msa0040410 | Msa0692470 | 0.805771 | 1.136652e-49 | -8.615850e-47 |
Msa0043240 | Msa0692470 | -0.818643 | 1.760959e-52 | -8.615850e-47 |
Msa0043680 | Msa0692470 | 0.811081 | 8.365842e-51 | -8.615850e-47 |
Msa0043940 | Msa0692470 | 0.803407 | 3.537926e-49 | -8.615850e-47 |
Msa0068410 | Msa0692470 | 0.808092 | 3.669448e-50 | -8.615850e-47 |
Msa0084630 | Msa0692470 | 0.849032 | 4.195642e-60 | -8.615850e-47 |
Msa0084680 | Msa0692470 | 0.816169 | 6.350724e-52 | -8.615850e-47 |
Msa0089210 | Msa0692470 | 0.829180 | 5.945952e-55 | -8.615850e-47 |
Msa0092660 | Msa0692470 | 0.836878 | 7.229637e-57 | -8.615850e-47 |
Msa0092680 | Msa0692470 | 0.813393 | 2.619110e-51 | -8.615850e-47 |
Msa0092730 | Msa0692470 | 0.831869 | 1.307176e-55 | -8.615850e-47 |
Msa0114240 | Msa0692470 | 0.808495 | 3.011067e-50 | -8.615850e-47 |
Msa0114250 | Msa0692470 | 0.809558 | 1.783273e-50 | -8.615850e-47 |
Msa0604700 | Msa0692470 | 0.836627 | 8.375497e-57 | -8.615850e-47 |
Msa0605620 | Msa0692470 | 0.834784 | 2.453154e-56 | -8.615850e-47 |
Msa0607300 | Msa0692470 | 0.846807 | 1.721861e-59 | -8.615850e-47 |
Msa0609990 | Msa0692470 | 0.803049 | 4.196255e-49 | -8.615850e-47 |
Msa0610860 | Msa0692470 | 0.824955 | 6.096967e-54 | -8.615850e-47 |
Msa0619330 | Msa0692470 | 0.834848 | 2.363698e-56 | -8.615850e-47 |
Msa0628060 | Msa0692470 | 0.806585 | 7.659220e-50 | -8.615850e-47 |
Msa0629500 | Msa0692470 | 0.809037 | 2.305895e-50 | -8.615850e-47 |
Msa0642650 | Msa0692470 | 0.805735 | 1.156428e-49 | -8.615850e-47 |
Msa0646570 | Msa0692470 | 0.824503 | 7.791074e-54 | -8.615850e-47 |
Msa0647710 | Msa0692470 | 0.808737 | 2.673603e-50 | -8.615850e-47 |
Msa0649310 | Msa0692470 | 0.825452 | 4.651784e-54 | -8.615850e-47 |
Msa0650360 | Msa0692470 | 0.806608 | 7.574278e-50 | -8.615850e-47 |
Msa0667970 | Msa0692470 | 0.825119 | 5.577870e-54 | -8.615850e-47 |
Msa0681890 | Msa0692470 | 0.825398 | 4.791522e-54 | -8.615850e-47 |
Msa0682400 | Msa0692470 | 0.817642 | 2.966359e-52 | -8.615850e-47 |
Msa0685540 | Msa0692470 | 0.816687 | 4.863820e-52 | -8.615850e-47 |
Msa0690350 | Msa0692470 | 0.840623 | 7.776136e-58 | -8.615850e-47 |
Msa0690530 | Msa0692470 | 0.832607 | 8.585364e-56 | -8.615850e-47 |
Msa0692470 | Msa0707780 | 0.842695 | 2.210082e-58 | -8.615850e-47 |
Msa0692470 | Msa0709480 | 0.805279 | 1.441226e-49 | -8.615850e-47 |
Msa0692470 | Msa0719340 | 0.817655 | 2.947057e-52 | -8.615850e-47 |
Msa0692470 | Msa0720270 | 0.804885 | 1.742448e-49 | -8.615850e-47 |
Msa0692470 | Msa0730180 | 0.834748 | 2.505164e-56 | -8.615850e-47 |
Msa0692470 | Msa0735470 | 0.810016 | 1.421357e-50 | -8.615850e-47 |
Msa0692470 | Msa0760890 | 0.822557 | 2.222697e-53 | -8.615850e-47 |
Msa0692470 | Msa0770430 | 0.824685 | 7.060186e-54 | -8.615850e-47 |
Msa0692470 | Msa0772150 | 0.800935 | 1.141361e-48 | -8.615850e-47 |
Msa0692470 | Msa0780140 | 0.801986 | 6.948977e-49 | -8.615850e-47 |
Msa0692470 | Msa0792510 | 0.804023 | 2.635323e-49 | -8.615850e-47 |
Msa0692470 | Msa0800130 | 0.800697 | 1.275963e-48 | -8.615850e-47 |
Msa0692470 | Msa0808420 | 0.818918 | 1.525023e-52 | -8.615850e-47 |
Msa0692470 | Msa0811510 | 0.818290 | 2.116960e-52 | -8.615850e-47 |
Msa0692470 | Msa0824140 | 0.807949 | 3.936828e-50 | -8.615850e-47 |
Msa0692470 | Msa0844530 | 0.810154 | 1.327422e-50 | -8.615850e-47 |
Msa0692470 | Msa0848380 | 0.804116 | 2.521138e-49 | -8.615850e-47 |
Msa0692470 | Msa0851740 | 0.810687 | 1.018517e-50 | -8.615850e-47 |
Msa0692470 | Msa0855020 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
Msa0692470 | Msa0863250 | 0.808936 | 2.424527e-50 | -8.615850e-47 |
Msa0692470 | Msa0890250 | 0.821003 | 5.086358e-53 | -8.615850e-47 |
Msa0692470 | Msa0906720 | 0.800253 | 1.571652e-48 | -8.615850e-47 |
Msa0692470 | Msa0909710 | 0.801716 | 7.898227e-49 | -8.615850e-47 |
Msa0692470 | Msa0925160 | 0.820446 | 6.828811e-53 | -8.615850e-47 |
Msa0692470 | Msa0931730 | 0.838446 | 2.861777e-57 | -8.615850e-47 |
Msa0692470 | Msa0938970 | 0.805661 | 1.198566e-49 | -8.615850e-47 |
Msa0692470 | Msa0955260 | 0.835836 | 1.330578e-56 | -8.615850e-47 |
Msa0692470 | Msa0981740 | 0.809916 | 1.493215e-50 | -8.615850e-47 |
Msa0692470 | Msa1000470 | 0.811126 | 8.183797e-51 | -8.615850e-47 |
Msa0692470 | Msa1014350 | 0.809005 | 2.342532e-50 | -8.615850e-47 |
Msa0692470 | Msa1016670 | 0.815627 | 8.392542e-52 | -8.615850e-47 |
Msa0692470 | Msa1022310 | 0.806061 | 9.877471e-50 | -8.615850e-47 |
Msa0692470 | Msa1027790 | 0.822568 | 2.209736e-53 | -8.615850e-47 |
Msa0692470 | Msa1028460 | 0.820308 | 7.345502e-53 | -8.615850e-47 |
Msa0692470 | Msa1029320 | 0.838005 | 3.718727e-57 | -8.615850e-47 |
Msa0692470 | Msa1029430 | 0.816932 | 4.286171e-52 | -8.615850e-47 |
Msa0692470 | Msa1044040 | 0.805524 | 1.280276e-49 | -8.615850e-47 |
Msa0692470 | Msa1055360 | 0.814149 | 1.784203e-51 | -8.615850e-47 |
Msa0692470 | Msa1058010 | 0.801858 | 7.383165e-49 | -8.615850e-47 |
Msa0692470 | Msa1061180 | 0.820882 | 5.423180e-53 | -8.615850e-47 |
Msa0692470 | Msa1061520 | 0.811307 | 7.476595e-51 | -8.615850e-47 |
Msa0692470 | Msa1068290 | 0.817207 | 3.716571e-52 | -8.615850e-47 |
Msa0692470 | Msa1080460 | 0.813085 | 3.059150e-51 | -8.615850e-47 |
Msa0692470 | Msa1080620 | 0.815157 | 1.067550e-51 | -8.615850e-47 |
Msa0692470 | Msa1080690 | 0.810666 | 1.029010e-50 | -8.615850e-47 |
Msa0692470 | Msa1081850 | 0.813180 | 2.916356e-51 | -8.615850e-47 |
Msa0692470 | Msa1084490 | 0.803741 | 3.015819e-49 | -8.615850e-47 |
Msa0692470 | Msa1093390 | 0.802856 | 4.598799e-49 | -8.615850e-47 |
Msa0692470 | Msa1096280 | 0.802828 | 4.662248e-49 | -8.615850e-47 |
Msa0692470 | Msa1102540 | 0.811641 | 6.323220e-51 | -8.615850e-47 |
Msa0692470 | Msa1106560 | 0.834418 | 3.031901e-56 | -8.615850e-47 |
Msa0692470 | Msa1112610 | 0.825283 | 5.101347e-54 | -8.615850e-47 |
Msa0692470 | Msa1116010 | 0.810317 | 1.224349e-50 | -8.615850e-47 |
Msa0692470 | Msa1125780 | 0.807913 | 4.007418e-50 | -8.615850e-47 |
Msa0692470 | Msa1125950 | 0.803866 | 2.841259e-49 | -8.615850e-47 |
Msa0692470 | Msa1140010 | 0.807351 | 5.274293e-50 | -8.615850e-47 |
Msa0692470 | Msa1149760 | 0.821627 | 3.650455e-53 | -8.615850e-47 |
Msa0692470 | Msa1151820 | 0.806242 | 9.048201e-50 | -8.615850e-47 |
Msa0692470 | Msa1171340 | 0.813940 | 1.984097e-51 | -8.615850e-47 |
Msa0692470 | Msa1183390 | 0.855047 | 8.196753e-62 | -8.615850e-47 |
Msa0692470 | Msa1194300 | 0.829470 | 5.055526e-55 | -8.615850e-47 |
Msa0692470 | Msa1194330 | 0.831114 | 2.005516e-55 | -8.615850e-47 |
Msa0692470 | Msa1214900 | 0.810122 | 1.348543e-50 | -8.615850e-47 |
Msa0692470 | Msa1226360 | 0.817119 | 3.890169e-52 | -8.615850e-47 |
Msa0692470 | Msa1226600 | 0.824870 | 6.386142e-54 | -8.615850e-47 |
Msa0692470 | Msa1229050 | 0.836832 | 7.427185e-57 | -8.615850e-47 |
Msa0692470 | Msa1233770 | 0.815492 | 8.990249e-52 | -8.615850e-47 |
Msa0692470 | Msa1238480 | 0.801739 | 7.810886e-49 | -8.615850e-47 |
Msa0692470 | Msa1262310 | 0.820906 | 5.353311e-53 | -8.615850e-47 |
Msa0692470 | Msa1271490 | 0.834375 | 3.109256e-56 | -8.615850e-47 |
Msa0692470 | Msa1271510 | 0.850323 | 1.829267e-60 | -8.615850e-47 |
Msa0692470 | Msa1276080 | 0.819329 | 1.230050e-52 | -8.615850e-47 |
Msa0692470 | Msa1302150 | 0.816967 | 4.207723e-52 | -8.615850e-47 |
Msa0692470 | Msa1309360 | 0.854113 | 1.528210e-61 | -8.615850e-47 |
Msa0692470 | Msa1326000 | 0.819211 | 1.308061e-52 | -8.615850e-47 |
Msa0692470 | Msa1344430 | 0.806408 | 8.346153e-50 | -8.615850e-47 |
Msa0692470 | Msa1376640 | 0.815036 | 1.135484e-51 | -8.615850e-47 |
Msa0692470 | Msa1381130 | 0.808796 | 2.596700e-50 | -8.615850e-47 |
Msa0692470 | Msa1385900 | 0.802749 | 4.839408e-49 | -8.615850e-47 |
Msa0692470 | Msa1404370 | 0.834537 | 2.830457e-56 | -8.615850e-47 |
Msa0692470 | Msa1405770 | 0.809919 | 1.491642e-50 | -8.615850e-47 |
Msa0692470 | Msa1412520 | 0.844775 | 6.134993e-59 | -8.615850e-47 |
Msa0692470 | Msa1418200 | 0.813593 | 2.366583e-51 | -8.615850e-47 |
Msa0692470 | Msa1422500 | 0.802886 | 4.533630e-49 | -8.615850e-47 |
Msa0692470 | Msa1428420 | 0.811219 | 7.811206e-51 | -8.615850e-47 |
Msa0692470 | Msa1430270 | 0.805854 | 1.091921e-49 | -8.615850e-47 |
Msa0692470 | Msa1432470 | 0.817293 | 3.555721e-52 | -8.615850e-47 |
Msa0692470 | Msa1447160 | -0.815377 | 9.535667e-52 | -8.615850e-47 |
Msa0692470 | Msa1455660 | 0.801247 | 9.852845e-49 | -8.615850e-47 |
Msa0692470 | Msa1458330 | 0.807225 | 5.608394e-50 | -8.615850e-47 |
Msa0692470 | Msa1464560 | 0.804365 | 2.237478e-49 | -8.615850e-47 |
Msa0125440 | Msa0692470 | 0.809431 | 1.898978e-50 | -8.615850e-47 |
Msa0127080 | Msa0692470 | 0.806838 | 6.771475e-50 | -8.615850e-47 |
Msa0130760 | Msa0692470 | 0.808393 | 3.166769e-50 | -8.615850e-47 |
Msa0130800 | Msa0692470 | 0.822115 | 2.814574e-53 | -8.615850e-47 |
Msa0135980 | Msa0692470 | 0.819834 | 9.429573e-53 | -8.615850e-47 |
Msa0137600 | Msa0692470 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
Msa0144340 | Msa0692470 | 0.823522 | 1.323614e-53 | -8.615850e-47 |
Msa0149500 | Msa0692470 | 0.809885 | 1.516423e-50 | -8.615850e-47 |
Msa0152380 | Msa0692470 | 0.804828 | 1.791321e-49 | -8.615850e-47 |
Msa0159750 | Msa0692470 | 0.819566 | 1.086062e-52 | -8.615850e-47 |
Msa0170680 | Msa0692470 | 0.818609 | 1.792964e-52 | -8.615850e-47 |
Msa0181020 | Msa0692470 | 0.801117 | 1.047663e-48 | -8.615850e-47 |
Msa0182310 | Msa0692470 | -0.809963 | 1.459128e-50 | -8.615850e-47 |
Msa0185390 | Msa0692470 | 0.809532 | 1.806333e-50 | -8.615850e-47 |
Msa0197900 | Msa0692470 | 0.800425 | 1.450303e-48 | -8.615850e-47 |
Msa0199740 | Msa0692470 | 0.800716 | 1.264974e-48 | -8.615850e-47 |
Msa0207000 | Msa0692470 | 0.816770 | 4.658411e-52 | -8.615850e-47 |
Msa0213080 | Msa0692470 | 0.817065 | 4.000203e-52 | -8.615850e-47 |
Msa0217470 | Msa0692470 | 0.830129 | 3.494759e-55 | -8.615850e-47 |
Msa0227490 | Msa0692470 | 0.815669 | 8.211425e-52 | -8.615850e-47 |
Msa0227500 | Msa0692470 | 0.813447 | 2.547689e-51 | -8.615850e-47 |
Msa0367370 | Msa0692470 | 0.824322 | 8.594053e-54 | -8.615850e-47 |
Msa0371070 | Msa0692470 | 0.809201 | 2.126756e-50 | -8.615850e-47 |
Msa0380310 | Msa0692470 | 0.810748 | 9.880344e-51 | -8.615850e-47 |
Msa0380520 | Msa0692470 | 0.818571 | 1.829123e-52 | -8.615850e-47 |
Msa0382500 | Msa0692470 | 0.834152 | 3.535196e-56 | -8.615850e-47 |
Msa0389060 | Msa0692470 | 0.801650 | 8.146009e-49 | -8.615850e-47 |
Msa0396970 | Msa0692470 | 0.806218 | 9.153635e-50 | -8.615850e-47 |
Msa0401340 | Msa0692470 | 0.804540 | 2.057061e-49 | -8.615850e-47 |
Msa0411560 | Msa0692470 | 0.803921 | 2.767263e-49 | -8.615850e-47 |
Msa0413180 | Msa0692470 | 0.829368 | 5.354549e-55 | -8.615850e-47 |
Msa0413740 | Msa0692470 | 0.837225 | 5.892174e-57 | -8.615850e-47 |
Msa0415460 | Msa0692470 | 0.802028 | 6.813729e-49 | -8.615850e-47 |
Msa0417630 | Msa0692470 | 0.809180 | 2.149616e-50 | -8.615850e-47 |
Msa0430020 | Msa0692470 | 0.814190 | 1.748106e-51 | -8.615850e-47 |
Msa0432680 | Msa0692470 | 0.834802 | 2.427698e-56 | -8.615850e-47 |
Msa0448120 | Msa0692470 | 0.817896 | 2.599536e-52 | -8.615850e-47 |
Msa0450460 | Msa0692470 | 0.818316 | 2.088989e-52 | -8.615850e-47 |
Msa0458110 | Msa0692470 | 0.808732 | 2.680697e-50 | -8.615850e-47 |
Msa0458790 | Msa0692470 | 0.818907 | 1.534293e-52 | -8.615850e-47 |
Msa0467920 | Msa0692470 | -0.802180 | 6.341193e-49 | -8.615850e-47 |
Msa0242290 | Msa0692470 | 0.846430 | 2.183296e-59 | -8.615850e-47 |
Msa0252180 | Msa0692470 | 0.803270 | 3.776673e-49 | -8.615850e-47 |
Msa0280500 | Msa0692470 | 0.801013 | 1.099884e-48 | -8.615850e-47 |
Msa0282860 | Msa0692470 | 0.802380 | 5.767421e-49 | -8.615850e-47 |
Msa0296610 | Msa0692470 | 0.832222 | 1.068949e-55 | -8.615850e-47 |
Msa0301180 | Msa0692470 | 0.816063 | 6.708242e-52 | -8.615850e-47 |
Msa0314790 | Msa0692470 | 0.802257 | 6.111567e-49 | -8.615850e-47 |
Msa0317260 | Msa0692470 | 0.829379 | 5.319044e-55 | -8.615850e-47 |
Msa0320540 | Msa0692470 | 0.821123 | 4.772958e-53 | -8.615850e-47 |
Msa0321800 | Msa0692470 | 0.802179 | 6.344537e-49 | -8.615850e-47 |
Msa0333900 | Msa0692470 | 0.819169 | 1.337394e-52 | -8.615850e-47 |
Msa0334020 | Msa0692470 | 0.819083 | 1.399407e-52 | -8.615850e-47 |
Msa0334980 | Msa0692470 | 0.840977 | 6.280672e-58 | -8.615850e-47 |
Msa0335890 | Msa0692470 | -0.803528 | 3.338612e-49 | -8.615850e-47 |
Msa0339860 | Msa0692470 | 0.807401 | 5.145802e-50 | -8.615850e-47 |
Msa0344070 | Msa0692470 | 0.826454 | 2.689573e-54 | -8.615850e-47 |
Msa0350020 | Msa0692470 | 0.806434 | 8.243585e-50 | -8.615850e-47 |
Msa0350910 | Msa0692470 | 0.811614 | 6.410137e-51 | -8.615850e-47 |
Msa0352200 | Msa0692470 | 0.808123 | 3.614765e-50 | -8.615850e-47 |
Msa0354390 | Msa0692470 | 0.808866 | 2.509216e-50 | -8.615850e-47 |
Msa0486530 | Msa0692470 | 0.805266 | 1.450520e-49 | -8.615850e-47 |
Msa0504730 | Msa0692470 | 0.810474 | 1.132471e-50 | -8.615850e-47 |
Msa0505390 | Msa0692470 | 0.836750 | 7.792588e-57 | -8.615850e-47 |
Msa0512130 | Msa0692470 | 0.817308 | 3.526721e-52 | -8.615850e-47 |
Msa0526640 | Msa0692470 | -0.806274 | 8.906836e-50 | -8.615850e-47 |
Msa0527600 | Msa0692470 | 0.804027 | 2.630257e-49 | -8.615850e-47 |
Msa0528740 | Msa0692470 | 0.800628 | 1.318278e-48 | -8.615850e-47 |
Msa0532840 | Msa0692470 | 0.825126 | 5.555230e-54 | -8.615850e-47 |
Msa0533010 | Msa0692470 | 0.823344 | 1.457204e-53 | -8.615850e-47 |
Msa0539320 | Msa0692470 | 0.803651 | 3.148799e-49 | -8.615850e-47 |
Msa0542010 | Msa0692470 | 0.827101 | 1.883605e-54 | -8.615850e-47 |
Msa0542040 | Msa0692470 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
Msa0546380 | Msa0692470 | 0.816965 | 4.212715e-52 | -8.615850e-47 |
Msa0546740 | Msa0692470 | 0.833257 | 5.915487e-56 | -8.615850e-47 |
Msa0550110 | Msa0692470 | 0.825259 | 5.167233e-54 | -8.615850e-47 |
Msa0553350 | Msa0692470 | 0.829893 | 3.989682e-55 | -8.615850e-47 |
Msa0574170 | Msa0692470 | 0.841964 | 3.451848e-58 | -8.615850e-47 |
Msa0576420 | Msa0692470 | 0.838136 | 3.439871e-57 | -8.615850e-47 |
Msa0578900 | Msa0692470 | 0.827910 | 1.205335e-54 | -8.615850e-47 |
Msa0583740 | Msa0692470 | 0.801080 | 1.065687e-48 | -8.615850e-47 |
Msa0583790 | Msa0692470 | 0.803531 | 3.334280e-49 | -8.615850e-47 |
Msa0587900 | Msa0692470 | 0.808299 | 3.315247e-50 | -8.615850e-47 |
Msa0589290 | Msa0692470 | 0.827531 | 1.486220e-54 | -8.615850e-47 |
Msa0589600 | Msa0692470 | 0.809741 | 1.629085e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692470 | MtrunA17_Chr4g0042711 | 98.225 | 507 | 9 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1044 |
Msa0692470 | MtrunA17_Chr5g0417871 | 79.835 | 486 | 91 | 3 | 28 | 506 | 9 | 494 | 0.0 | 820 |
Msa0692470 | MtrunA17_Chr6g0455571 | 59.006 | 483 | 196 | 2 | 8 | 488 | 25 | 507 | 0.0 | 605 |
Msa0692470 | MtrunA17_Chr4g0061781 | 61.588 | 466 | 173 | 2 | 29 | 488 | 43 | 508 | 0.0 | 603 |
Msa0692470 | MtrunA17_Chr2g0307971 | 57.809 | 493 | 202 | 3 | 8 | 499 | 30 | 517 | 0.0 | 597 |
Msa0692470 | MtrunA17_Chr5g0426591 | 48.675 | 415 | 201 | 4 | 87 | 489 | 97 | 511 | 1.83e-140 | 414 |
Msa0692470 | MtrunA17_Chr4g0070551 | 48.485 | 396 | 197 | 5 | 97 | 490 | 228 | 618 | 6.68e-136 | 406 |
Msa0692470 | MtrunA17_Chr4g0008451 | 47.932 | 411 | 205 | 6 | 97 | 505 | 232 | 635 | 1.46e-134 | 404 |
Msa0692470 | MtrunA17_Chr3g0132371 | 47.952 | 415 | 201 | 5 | 87 | 489 | 127 | 538 | 1.50e-131 | 392 |
Msa0692470 | MtrunA17_Chr5g0436321 | 46.599 | 397 | 205 | 5 | 96 | 490 | 160 | 551 | 1.04e-129 | 389 |
Msa0692470 | MtrunA17_Chr3g0129981 | 45.735 | 422 | 200 | 8 | 87 | 489 | 100 | 511 | 1.02e-124 | 374 |
Msa0692470 | MtrunA17_Chr3g0143821 | 43.358 | 399 | 207 | 9 | 98 | 492 | 112 | 495 | 6.24e-100 | 312 |
Msa0692470 | MtrunA17_Chr5g0399311 | 42.143 | 420 | 218 | 10 | 92 | 504 | 119 | 520 | 2.09e-99 | 309 |
Msa0692470 | MtrunA17_Chr5g0448581 | 40.611 | 458 | 238 | 11 | 54 | 505 | 90 | 519 | 2.84e-98 | 308 |
Msa0692470 | MtrunA17_Chr4g0056061 | 40.876 | 411 | 220 | 8 | 93 | 497 | 104 | 497 | 3.17e-98 | 306 |
Msa0692470 | MtrunA17_Chr1g0204121 | 39.716 | 423 | 223 | 11 | 83 | 492 | 74 | 477 | 4.32e-93 | 292 |
Msa0692470 | MtrunA17_Chr5g0412251 | 38.051 | 431 | 218 | 9 | 97 | 491 | 86 | 503 | 1.18e-90 | 286 |
Msa0692470 | MtrunA17_Chr3g0123521 | 39.487 | 390 | 216 | 7 | 90 | 464 | 144 | 528 | 2.44e-89 | 284 |
Msa0692470 | MtrunA17_Chr3g0132951 | 36.613 | 437 | 228 | 9 | 91 | 491 | 94 | 517 | 5.11e-88 | 279 |
Msa0692470 | MtrunA17_Chr1g0204141 | 38.005 | 421 | 236 | 10 | 83 | 492 | 74 | 480 | 2.49e-84 | 270 |
Msa0692470 | MtrunA17_Chr4g0043911 | 35.096 | 416 | 243 | 10 | 97 | 496 | 150 | 554 | 5.42e-82 | 265 |
Msa0692470 | MtrunA17_Chr5g0424241 | 36.650 | 412 | 231 | 10 | 98 | 489 | 158 | 559 | 6.95e-79 | 258 |
Msa0692470 | MtrunA17_Chr4g0075311 | 37.642 | 441 | 220 | 11 | 94 | 489 | 161 | 591 | 1.03e-78 | 257 |
Msa0692470 | MtrunA17_Chr2g0284071 | 35.892 | 443 | 231 | 10 | 91 | 490 | 209 | 641 | 4.21e-78 | 257 |
Msa0692470 | MtrunA17_Chr1g0160781 | 34.223 | 412 | 244 | 9 | 97 | 492 | 149 | 549 | 1.10e-76 | 251 |
Msa0692470 | MtrunA17_Chr3g0077321 | 35.507 | 414 | 232 | 11 | 97 | 490 | 147 | 545 | 1.10e-74 | 246 |
Msa0692470 | MtrunA17_Chr3g0087291 | 36.432 | 398 | 234 | 9 | 100 | 492 | 176 | 559 | 1.14e-71 | 238 |
Msa0692470 | MtrunA17_Chr4g0010511 | 36.409 | 401 | 236 | 8 | 100 | 495 | 236 | 622 | 5.18e-71 | 238 |
Msa0692470 | MtrunA17_Chr7g0240241 | 77.419 | 124 | 24 | 1 | 256 | 375 | 1 | 124 | 9.70e-61 | 195 |
Msa0692470 | MtrunA17_Chr4g0003561 | 33.957 | 374 | 221 | 9 | 90 | 457 | 68 | 421 | 9.82e-59 | 200 |
Msa0692470 | MtrunA17_Chr3g0127811 | 32.997 | 297 | 171 | 8 | 97 | 379 | 63 | 345 | 6.08e-42 | 156 |
Msa0692470 | MtrunA17_Chr1g0146501 | 32.686 | 309 | 180 | 8 | 94 | 379 | 82 | 385 | 9.94e-42 | 158 |
Msa0692470 | MtrunA17_Chr7g0220381 | 31.148 | 305 | 185 | 7 | 85 | 370 | 86 | 384 | 3.22e-39 | 151 |
Msa0692470 | MtrunA17_Chr4g0002361 | 26.225 | 347 | 196 | 12 | 97 | 427 | 86 | 388 | 9.56e-24 | 103 |
Msa0692470 | MtrunA17_Chr1g0172911 | 58.000 | 50 | 21 | 0 | 209 | 258 | 80 | 129 | 2.40e-12 | 64.3 |
Msa0692470 | MtrunA17_Chr1g0172911 | 47.761 | 67 | 11 | 1 | 95 | 137 | 19 | 85 | 1.37e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692470 | AT1G14020.1 | 71.881 | 505 | 136 | 2 | 1 | 505 | 1 | 499 | 0.0 | 761 |
Msa0692470 | AT2G03280.1 | 69.528 | 466 | 130 | 4 | 24 | 488 | 26 | 480 | 0.0 | 687 |
Msa0692470 | AT2G03280.2 | 65.720 | 493 | 130 | 5 | 24 | 488 | 26 | 507 | 0.0 | 673 |
Msa0692470 | AT5G15740.1 | 58.030 | 467 | 194 | 2 | 23 | 488 | 33 | 498 | 0.0 | 582 |
Msa0692470 | AT3G02250.1 | 58.491 | 477 | 190 | 4 | 15 | 488 | 27 | 498 | 0.0 | 576 |
Msa0692470 | AT2G37980.1 | 46.453 | 437 | 227 | 5 | 73 | 507 | 202 | 633 | 5.90e-138 | 412 |
Msa0692470 | AT3G54100.1 | 46.065 | 432 | 216 | 7 | 73 | 497 | 198 | 619 | 1.07e-133 | 401 |
Msa0692470 | AT5G35570.1 | 47.407 | 405 | 206 | 5 | 96 | 498 | 250 | 649 | 2.45e-132 | 398 |
Msa0692470 | AT1G22460.1 | 45.370 | 432 | 216 | 6 | 76 | 490 | 130 | 558 | 2.54e-129 | 388 |
Msa0692470 | AT5G64600.1 | 46.778 | 419 | 200 | 8 | 87 | 489 | 103 | 514 | 1.80e-128 | 384 |
Msa0692470 | AT5G01100.1 | 47.132 | 401 | 204 | 5 | 97 | 493 | 216 | 612 | 2.09e-128 | 387 |
Msa0692470 | AT1G76270.1 | 44.584 | 397 | 204 | 7 | 100 | 494 | 109 | 491 | 1.93e-104 | 324 |
Msa0692470 | AT4G38390.1 | 43.500 | 400 | 212 | 7 | 97 | 494 | 123 | 510 | 1.66e-102 | 318 |
Msa0692470 | AT1G20550.1 | 42.157 | 408 | 220 | 7 | 100 | 505 | 112 | 505 | 4.38e-102 | 318 |
Msa0692470 | AT4G16650.2 | 43.521 | 409 | 207 | 10 | 89 | 490 | 113 | 504 | 3.26e-95 | 299 |
Msa0692470 | AT4G16650.1 | 43.521 | 409 | 207 | 10 | 89 | 490 | 113 | 504 | 3.26e-95 | 299 |
Msa0692470 | AT1G04910.1 | 36.853 | 464 | 259 | 10 | 50 | 506 | 57 | 493 | 8.82e-92 | 290 |
Msa0692470 | AT4G24530.1 | 37.674 | 430 | 219 | 9 | 97 | 490 | 101 | 517 | 8.61e-90 | 284 |
Msa0692470 | AT3G26370.1 | 38.974 | 390 | 218 | 7 | 90 | 464 | 152 | 536 | 1.82e-89 | 285 |
Msa0692470 | AT5G65470.1 | 35.581 | 430 | 226 | 9 | 99 | 490 | 87 | 503 | 1.34e-86 | 276 |
Msa0692470 | AT1G11990.1 | 39.173 | 411 | 222 | 10 | 98 | 491 | 191 | 590 | 2.09e-82 | 267 |
Msa0692470 | AT1G62330.1 | 34.862 | 436 | 232 | 8 | 98 | 489 | 222 | 649 | 2.85e-82 | 268 |
Msa0692470 | AT1G38065.1 | 36.427 | 431 | 238 | 11 | 79 | 489 | 24 | 438 | 5.56e-82 | 263 |
Msa0692470 | AT1G38065.2 | 37.046 | 413 | 230 | 10 | 97 | 489 | 26 | 428 | 6.69e-82 | 262 |
Msa0692470 | AT1G38131.1 | 37.046 | 413 | 230 | 10 | 97 | 489 | 155 | 557 | 1.72e-80 | 262 |
Msa0692470 | AT1G11990.2 | 36.161 | 448 | 221 | 10 | 98 | 491 | 176 | 612 | 1.82e-77 | 255 |
Msa0692470 | AT5G63390.1 | 38.000 | 400 | 228 | 9 | 100 | 493 | 167 | 552 | 1.94e-76 | 251 |
Msa0692470 | AT1G29200.4 | 37.931 | 435 | 219 | 11 | 97 | 490 | 70 | 494 | 2.61e-76 | 248 |
Msa0692470 | AT1G29200.1 | 37.931 | 435 | 219 | 11 | 97 | 490 | 70 | 494 | 2.61e-76 | 248 |
Msa0692470 | AT1G35510.1 | 35.012 | 417 | 240 | 10 | 92 | 490 | 154 | 557 | 3.94e-75 | 248 |
Msa0692470 | AT1G29200.2 | 37.931 | 435 | 219 | 11 | 97 | 490 | 186 | 610 | 4.79e-75 | 248 |
Msa0692470 | AT2G01480.1 | 36.314 | 369 | 213 | 7 | 97 | 449 | 154 | 516 | 1.23e-74 | 246 |
Msa0692470 | AT1G14970.3 | 34.140 | 413 | 245 | 10 | 97 | 493 | 9 | 410 | 1.45e-74 | 241 |
Msa0692470 | AT1G14970.2 | 34.140 | 413 | 245 | 10 | 97 | 493 | 35 | 436 | 2.47e-74 | 242 |
Msa0692470 | AT2G01480.2 | 36.695 | 357 | 207 | 6 | 97 | 437 | 154 | 507 | 2.91e-74 | 244 |
Msa0692470 | AT1G29200.3 | 37.762 | 429 | 216 | 11 | 103 | 490 | 2 | 420 | 4.60e-74 | 240 |
Msa0692470 | AT1G14970.1 | 34.140 | 413 | 245 | 10 | 97 | 493 | 155 | 556 | 3.30e-73 | 242 |
Msa0692470 | AT2G44500.1 | 37.626 | 396 | 227 | 10 | 100 | 489 | 180 | 561 | 5.68e-73 | 242 |
Msa0692470 | AT3G07900.1 | 34.634 | 410 | 247 | 8 | 84 | 489 | 180 | 572 | 5.12e-69 | 231 |
Msa0692470 | AT1G52630.1 | 32.708 | 373 | 224 | 10 | 90 | 458 | 70 | 419 | 5.47e-59 | 201 |
Msa0692470 | AT3G03810.2 | 35.855 | 304 | 178 | 7 | 91 | 379 | 83 | 384 | 8.56e-50 | 181 |
Msa0692470 | AT3G03810.1 | 35.855 | 304 | 178 | 7 | 91 | 379 | 83 | 384 | 8.56e-50 | 181 |
Msa0692470 | AT1G52630.2 | 31.054 | 351 | 218 | 9 | 112 | 458 | 1 | 331 | 9.97e-50 | 174 |
Msa0692470 | AT3G26370.2 | 39.171 | 217 | 119 | 5 | 90 | 296 | 152 | 365 | 1.11e-45 | 164 |
Msa0692470 | AT3G30300.2 | 33.333 | 306 | 180 | 7 | 91 | 379 | 97 | 395 | 2.87e-43 | 163 |
Msa0692470 | AT3G30300.1 | 33.333 | 306 | 180 | 7 | 91 | 379 | 97 | 395 | 2.87e-43 | 163 |
Msa0692470 | AT2G44500.2 | 39.914 | 233 | 127 | 7 | 100 | 326 | 180 | 405 | 3.62e-39 | 147 |
Msa0692470 | AT1G51630.1 | 24.845 | 322 | 192 | 9 | 96 | 406 | 90 | 372 | 6.95e-19 | 89.4 |
Find 262 sgRNAs with CRISPR-Local
Find 480 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTTTGTTGCAGTGTTTA+AGG | 0.136425 | 4_4:+61026247 | Msa0692470:five_prime_UTR |
TTGATCATGGTCCCCTTTAA+AGG | 0.174900 | 4_4:+61030744 | Msa0692470:three_prime_UTR |
TTATACAACTATACTGAATT+TGG | 0.182459 | 4_4:-61030523 | Msa0692480:three_prime_UTR |
CAAATTCTGTGGACACAATT+TGG | 0.185076 | 4_4:+61026123 | Msa0692470:five_prime_UTR |
AGCAAGTTCTTAATCATTAT+TGG | 0.190620 | 4_4:-61025646 | None:intergenic |
CCATCTGTGATGAATGATTT+TGG | 0.203102 | 4_4:-61029802 | None:intergenic |
AAAGTTCTGCTGCAACTTTC+TGG | 0.203760 | 4_4:+61031874 | Msa0692470:three_prime_UTR |
ATTGCAGCCGGTGAGATTTA+TGG | 0.227102 | 4_4:+61029428 | Msa0692470:CDS |
TGGCATTCCAATTTCTTTAC+TGG | 0.232585 | 4_4:+61026591 | Msa0692470:CDS |
TTGCAGATTTGTGTTAATTT+TGG | 0.236857 | 4_4:+61026344 | Msa0692470:intron |
ATAGACATTTCAAATATTCT+TGG | 0.242260 | 4_4:-61025688 | None:intergenic |
GGGTACCGATGCTTTCTTAT+TGG | 0.244903 | 4_4:-61031492 | Msa0692480:CDS |
TCAGATATGCATTCCCTTCA+TGG | 0.261168 | 4_4:+61029288 | Msa0692470:intron |
GATGGCTGCTTTGGATTTCA+TGG | 0.269401 | 4_4:+61029820 | Msa0692470:CDS |
TGCATTCAATCAACCTTTAA+AGG | 0.269412 | 4_4:-61030757 | Msa0692480:three_prime_UTR |
AGATTGCTCTTGCATACTTA+TGG | 0.269547 | 4_4:-61030345 | Msa0692480:three_prime_UTR |
AGTAAATCCAGTAAAGAAAT+TGG | 0.278555 | 4_4:-61026598 | None:intergenic |
ACCAGCTTCAAATTCAATTC+TGG | 0.283543 | 4_4:+61026183 | Msa0692470:five_prime_UTR |
CACCCCTCAAATTGAGAATC+TGG | 0.293410 | 4_4:+61028891 | Msa0692470:CDS |
TGCTTTGGATTTCATGGTTT+CGG | 0.294885 | 4_4:+61029826 | Msa0692470:CDS |
CAAAATACTTCTAATCTTGC+AGG | 0.301113 | 4_4:-61030888 | Msa0692480:exon |
ACCAGCAAGGGCGGATTTGC+AGG | 0.304466 | 4_4:+61031379 | Msa0692470:three_prime_UTR |
TCCTTTCTTTCCATTCTCAT+TGG | 0.305081 | 4_4:+61026013 | Msa0692470:five_prime_UTR |
TTCATCACAGATGGCTGCTT+TGG | 0.305983 | 4_4:+61029811 | Msa0692470:CDS |
TTCTAAGAGTGTCCTGCAAT+GGG | 0.310538 | 4_4:+61027893 | Msa0692470:CDS |
TTGCTTGATATGCATCAAAA+TGG | 0.313563 | 4_4:+61030081 | Msa0692470:CDS |
CATCTTTGCAAGCCTCTATA+TGG | 0.317158 | 4_4:-61030468 | Msa0692480:three_prime_UTR |
CTTTCTGGCTCTGATACATT+TGG | 0.328912 | 4_4:+61031889 | Msa0692470:three_prime_UTR |
CTAAGTTTCTGTAGATCAAT+TGG | 0.331955 | 4_4:-61028838 | None:intergenic |
AAGGATTTCTTATCAAGTTC+CGG | 0.337356 | 4_4:-61028076 | None:intergenic |
GCTTTCTCAGGTTGTACTCT+TGG | 0.343079 | 4_4:+61028991 | Msa0692470:CDS |
GCAGAGTTGGCTCTGGACTA+TGG | 0.343115 | 4_4:-61031707 | Msa0692480:CDS |
ATGCAAGAGCAATCTGAAAA+TGG | 0.345318 | 4_4:+61030353 | Msa0692470:three_prime_UTR |
AACTTGATAAGAAATCCTTT+TGG | 0.353716 | 4_4:+61028080 | Msa0692470:CDS |
GCCTGCAAATCCGCCCTTGC+TGG | 0.360260 | 4_4:-61031380 | Msa0692480:CDS |
TAGAAATAATCCTCCTCCTT+TGG | 0.360561 | 4_4:-61030198 | Msa0692480:three_prime_UTR |
TAGCTCTCATGCAGGTATTC+CGG | 0.361952 | 4_4:+61030015 | Msa0692470:intron |
CCAGCTTCAAATTCAATTCT+GGG | 0.362826 | 4_4:+61026184 | Msa0692470:five_prime_UTR |
AACAACAGTATGTCATTAAC+TGG | 0.364991 | 4_4:+61030854 | Msa0692470:three_prime_UTR |
CATTGTGCTGTGGACATGTT+TGG | 0.367522 | 4_4:+61026542 | Msa0692470:CDS |
CACTGTTCAGAGACTCCATC+TGG | 0.373117 | 4_4:-61031466 | Msa0692480:CDS |
GCATTCAATCAACCTTTAAA+GGG | 0.374835 | 4_4:-61030756 | Msa0692480:three_prime_UTR |
TGCTCTTGCATACTTATGGT+TGG | 0.387006 | 4_4:-61030341 | Msa0692480:three_prime_UTR |
ACCTTTATTCCTACCTATGA+TGG | 0.388352 | 4_4:+61029860 | Msa0692470:CDS |
GATCTTCGAGCAGAAAGAAT+TGG | 0.388839 | 4_4:-61030998 | Msa0692480:CDS |
AGCTAACAGGAGGCATCTCC+AGG | 0.388940 | 4_4:-61028312 | None:intergenic |
GCTCTTGCATACTTATGGTT+GGG | 0.392646 | 4_4:-61030340 | Msa0692480:three_prime_UTR |
ATGGACATGCTGGCTTTCTC+AGG | 0.395187 | 4_4:+61028979 | Msa0692470:CDS |
TGCCCCAGATTCTCAATTTG+AGG | 0.396144 | 4_4:-61028895 | None:intergenic |
TCACATGCGTTCACCGTAGA+AGG | 0.396385 | 4_4:+61030780 | Msa0692470:three_prime_UTR |
TTCTGTCAAGGCAGGAGAAC+AGG | 0.398267 | 4_4:-61032099 | Msa0692480:intron |
GAACCTCACATTGGTTGTTC+CGG | 0.404001 | 4_4:+61028057 | Msa0692470:CDS |
CCATCTTATTGGACCGGAAA+AGG | 0.405140 | 4_4:+61030049 | Msa0692470:CDS |
ACAAGCTGCAGGCATGTAAT+GGG | 0.405918 | 4_4:+61030693 | Msa0692470:three_prime_UTR |
CTCAAGGATCTTGGACTTTG+CGG | 0.406199 | 4_4:-61030940 | Msa0692480:CDS |
GAAAGGAGGCTCAAGGATCT+TGG | 0.407166 | 4_4:-61030949 | Msa0692480:CDS |
TATGCATATCGATCTGCATT+TGG | 0.408825 | 4_4:+61031674 | Msa0692470:three_prime_UTR |
TTCTCCTGCCTTGACAGAAA+GGG | 0.411526 | 4_4:+61032103 | Msa0692470:three_prime_UTR |
TACAAGCTGCAGGCATGTAA+TGG | 0.411895 | 4_4:+61030692 | Msa0692470:three_prime_UTR |
CTGAAAATGGCTCCTTCCCT+CGG | 0.419876 | 4_4:+61030366 | Msa0692470:three_prime_UTR |
AGTGCTACTAATCTCAGATA+TGG | 0.428804 | 4_4:+61031518 | Msa0692470:three_prime_UTR |
GCCTTGGTTATGCAAGCCTT+AGG | 0.432969 | 4_4:+61029380 | Msa0692470:CDS |
CCCATCATAGGTAGGAATAA+AGG | 0.436770 | 4_4:-61029861 | None:intergenic |
GTGCATGGATTCAAAGGTTT+GGG | 0.437538 | 4_4:-61025833 | None:intergenic |
GCAGGAAATTATACTAGTAA+TGG | 0.439060 | 4_4:+61027868 | Msa0692470:intron |
TTTCCTTGATATGGAAGAGC+TGG | 0.441012 | 4_4:+61031932 | Msa0692470:three_prime_UTR |
TTTCTTGATAATATTCCAAC+TGG | 0.444121 | 4_4:+61030968 | Msa0692470:three_prime_UTR |
TTTCTAAGAGTGTCCTGCAA+TGG | 0.444915 | 4_4:+61027892 | Msa0692470:CDS |
ATACCTACGGTCTGCCCAAA+AGG | 0.445579 | 4_4:-61028095 | None:intergenic |
AGGAAATAGTGTCTGAAGAA+AGG | 0.445827 | 4_4:+61029318 | Msa0692470:CDS |
GATTTCATGGTTTCGGTAGC+CGG | 0.450519 | 4_4:+61029833 | Msa0692470:CDS |
GGAACTGCTGTAACTCATCA+AGG | 0.452325 | 4_4:-61029781 | None:intergenic |
TGTGCATGGATTCAAAGGTT+TGG | 0.454873 | 4_4:-61025834 | None:intergenic |
TGAAAAGTGTGTGAAGGTTA+TGG | 0.457566 | 4_4:+61026370 | Msa0692470:five_prime_UTR |
AAAAGTCCATCTTATTGGAC+CGG | 0.458534 | 4_4:+61030043 | Msa0692470:CDS |
ATAGTTTATTACCTGTTCAA+TGG | 0.458942 | 4_4:+61031346 | Msa0692470:intron |
TGAAGTGTGTGACAAAGAAA+TGG | 0.461488 | 4_4:+61026407 | Msa0692470:exon |
GAAGTGCACCACCTTGTGTT+TGG | 0.463947 | 4_4:-61028779 | None:intergenic |
AAGCTGCTCCTTTGATTCCA+AGG | 0.468221 | 4_4:+61026481 | Msa0692470:CDS |
GTTCTCCTGCCTTGACAGAA+AGG | 0.468467 | 4_4:+61032102 | Msa0692470:three_prime_UTR |
TTGGGAGACCATTATTTGCT+AGG | 0.469220 | 4_4:-61028819 | None:intergenic |
GCCCCAGATTCTCAATTTGA+GGG | 0.469715 | 4_4:-61028894 | None:intergenic |
TTATTCTGGCAGTGGCTTCG+AGG | 0.470272 | 4_4:+61028189 | Msa0692470:intron |
GAATAAACCAAACACGAAAA+CGG | 0.470528 | 4_4:-61026506 | None:intergenic |
TCCAATGAGAATGGAAAGAA+AGG | 0.471672 | 4_4:-61026014 | None:intergenic |
CTAACTTGCAGGAAGTAGAA+TGG | 0.473374 | 4_4:-61026685 | None:intergenic |
TAAGTTTCTGTAGATCAATT+GGG | 0.475386 | 4_4:-61028837 | None:intergenic |
TGGAGATGCCTCCTGTTAGC+TGG | 0.475776 | 4_4:+61028314 | Msa0692470:CDS |
TTGTGACTGTGAGTGAACTA+TGG | 0.476628 | 4_4:+61026571 | Msa0692470:CDS |
AGATATGGAAGCATCCCTTC+TGG | 0.477120 | 4_4:+61031533 | Msa0692470:three_prime_UTR |
CTCCTCATTATCACGGCTCA+TGG | 0.477204 | 4_4:+61031427 | Msa0692470:three_prime_UTR |
AAGCAATGCAGAGTTGGCTC+TGG | 0.478444 | 4_4:-61031714 | Msa0692480:CDS |
TAACTTGCAGGAAGTAGAAT+GGG | 0.479064 | 4_4:-61026684 | None:intergenic |
CAAACACGAAAACGGCTCCT+TGG | 0.481546 | 4_4:-61026498 | None:intergenic |
CTCCATCTGGGGTCATCTTG+AGG | 0.481584 | 4_4:-61031453 | Msa0692480:CDS |
GAAATATATGTTCCATATAG+AGG | 0.482623 | 4_4:+61030456 | Msa0692470:three_prime_UTR |
AATTGTGTGCATGGATTCAA+AGG | 0.483270 | 4_4:-61025839 | None:intergenic |
ACCCCTCAAATTGAGAATCT+GGG | 0.484445 | 4_4:+61028892 | Msa0692470:CDS |
AAGAGGCAAATCTAGATTCA+AGG | 0.484970 | 4_4:-61031080 | Msa0692480:CDS |
GAGGGGTGAATTTAAGTGCC+TGG | 0.487600 | 4_4:-61028876 | None:intergenic |
GTCAAATGAAAAGTATTACT+TGG | 0.489028 | 4_4:+61028336 | Msa0692470:CDS |
CTCAGATGCAATGCCACAAA+AGG | 0.490594 | 4_4:-61028949 | None:intergenic |
ACAACTATACTGAATTTGGT+GGG | 0.497845 | 4_4:-61030519 | Msa0692480:three_prime_UTR |
GGGATTACCTATTTGCCCTA+AGG | 0.498091 | 4_4:-61032130 | Msa0692480:CDS |
AAACAAAAGCAATGCAGAGT+TGG | 0.498255 | 4_4:-61031720 | Msa0692480:CDS |
ATTTCCTTCTCTCTCCATGA+AGG | 0.500444 | 4_4:-61029302 | None:intergenic |
AGGTGAGGATCCAATGAGAA+TGG | 0.501136 | 4_4:-61026023 | None:intergenic |
GTAGATGAATTGAGAGATCC+AGG | 0.502785 | 4_4:-61025811 | None:intergenic |
GATGCACGCCTAGCAAATAA+TGG | 0.504541 | 4_4:+61028811 | Msa0692470:CDS |
CCCAGAATTGAATTTGAAGC+TGG | 0.505271 | 4_4:-61026184 | None:intergenic |
ATAACCAAGGCAGTCTCCTC+CGG | 0.505709 | 4_4:-61029368 | None:intergenic |
CAATTGATCTACAGAAACTT+AGG | 0.505738 | 4_4:+61028839 | Msa0692470:CDS |
ATGGAAAGAAAGGATCAAAT+CGG | 0.506036 | 4_4:-61026004 | None:intergenic |
GAATTTGAAGCTGGTGATTG+AGG | 0.506597 | 4_4:-61026175 | None:intergenic |
ACAGGTTCACGAAAAGAGAA+TGG | 0.506682 | 4_4:+61030140 | Msa0692470:CDS |
CATGCCTGCAGCTTGTAAAG+TGG | 0.508006 | 4_4:-61030686 | Msa0692480:three_prime_UTR |
CCGAGGATCTCAAGCGGATG+AGG | 0.509548 | 4_4:+61029031 | Msa0692470:CDS |
TAGCCAGCTCTTCCATATCA+AGG | 0.509727 | 4_4:-61031935 | Msa0692480:intron |
TATGCATACACCTTGACACT+GGG | 0.512341 | 4_4:-61031659 | Msa0692480:CDS |
GTCTGAAGAAAGGAGATCCC+AGG | 0.512801 | 4_4:+61029328 | Msa0692470:CDS |
TACAACTATACTGAATTTGG+TGG | 0.513828 | 4_4:-61030520 | Msa0692480:three_prime_UTR |
TTGCGCCTCAAAATACAGCT+TGG | 0.514584 | 4_4:+61031846 | Msa0692470:three_prime_UTR |
GCAGTCTCCTCCGGTGTCAA+AGG | 0.517244 | 4_4:-61029359 | None:intergenic |
GTGTCAAAGGACATAGACCC+TGG | 0.517880 | 4_4:-61029346 | None:intergenic |
TGGGTTGTAATAATTGTGGC+CGG | 0.524912 | 4_4:+61030712 | Msa0692470:three_prime_UTR |
CACATTCATAACTGTGCAGT+TGG | 0.525016 | 4_4:-61031778 | Msa0692480:intron |
GACACCGGAGGAGACTGCCT+TGG | 0.525025 | 4_4:+61029364 | Msa0692470:CDS |
GCATCTACAAACTCATTCCA+TGG | 0.525256 | 4_4:-61030111 | Msa0692480:three_prime_UTR |
GGAAGCATCCCTTCTGGAAG+AGG | 0.525978 | 4_4:+61031539 | Msa0692470:three_prime_UTR |
GCCCATGAGCCGTGATAATG+AGG | 0.527832 | 4_4:-61031429 | Msa0692480:CDS |
TGAAAATGGCTCCTTCCCTC+GGG | 0.528010 | 4_4:+61030367 | Msa0692470:three_prime_UTR |
TTGAAGAGCTTCAAATTCTG+TGG | 0.528024 | 4_4:+61026112 | Msa0692470:five_prime_UTR |
ATCTGAGATTAGTAGCACTA+GGG | 0.531413 | 4_4:-61031514 | Msa0692480:CDS |
CTAAGAGTGTCCTGCAATGG+GGG | 0.532495 | 4_4:+61027895 | Msa0692470:CDS |
AATTTGAAGCTGGTGATTGA+GGG | 0.533657 | 4_4:-61026174 | None:intergenic |
TCTCCTGCCTTGACAGAAAG+GGG | 0.533728 | 4_4:+61032104 | Msa0692470:three_prime_UTR |
CCTCATCCGCTTGAGATCCT+CGG | 0.534275 | 4_4:-61029031 | None:intergenic |
GTTTGTAGATGCTGTGCGAC+AGG | 0.534296 | 4_4:+61030122 | Msa0692470:CDS |
CTTGGACTTTGCGGTGAAAG+TGG | 0.534968 | 4_4:-61030931 | Msa0692480:CDS |
CCTTTATTCCTACCTATGAT+GGG | 0.535492 | 4_4:+61029861 | Msa0692470:CDS |
AGTTGGAATATTATCAAGAA+AGG | 0.536592 | 4_4:-61030966 | Msa0692480:CDS |
ATCGCAAATGTAGCCTTCTA+CGG | 0.536666 | 4_4:-61030793 | Msa0692480:three_prime_UTR |
AGAATTGGAACTAGACCAGT+TGG | 0.537321 | 4_4:-61030983 | Msa0692480:CDS |
TGAAAAGTATTACTTGGAGC+AGG | 0.539964 | 4_4:+61028342 | Msa0692470:CDS |
GAAGCTGGTGATTGAGGGTG+AGG | 0.542158 | 4_4:-61026169 | None:intergenic |
CCAAAATCATTCATCACAGA+TGG | 0.542359 | 4_4:+61029802 | Msa0692470:CDS |
CTTCAAATTCAATTCTGGGT+CGG | 0.542473 | 4_4:+61026188 | Msa0692470:five_prime_UTR |
TCCTCATTATCACGGCTCAT+GGG | 0.543503 | 4_4:+61031428 | Msa0692470:three_prime_UTR |
TGTCTCCCGGTCAAAACCTA+AGG | 0.543702 | 4_4:-61029396 | None:intergenic |
AACTATACTGAATTTGGTGG+GGG | 0.544382 | 4_4:-61030517 | Msa0692480:three_prime_UTR |
TATGAAGTCAAAGGACCAGC+TGG | 0.544591 | 4_4:-61032164 | Msa0692480:CDS |
CTACAAACTCATTCCATGGA+AGG | 0.551044 | 4_4:-61030107 | Msa0692480:three_prime_UTR |
GCAGGATCGCAAGCTGAAAG+AGG | 0.551716 | 4_4:-61031097 | Msa0692480:intron |
CACCTCAAGATGACCCCAGA+TGG | 0.552036 | 4_4:+61031451 | Msa0692470:three_prime_UTR |
AAACGGCTCCTTGGAATCAA+AGG | 0.552528 | 4_4:-61026489 | None:intergenic |
TCCCAAGAGAAAAGACCAGC+TGG | 0.553440 | 4_4:+61032149 | Msa0692470:three_prime_UTR |
CCCCAGATTCTCAATTTGAG+GGG | 0.555415 | 4_4:-61028893 | None:intergenic |
GAGATATGAGATGGACATGC+TGG | 0.557518 | 4_4:+61028969 | Msa0692470:CDS |
ACTGTTCAGAGACTCCATCT+GGG | 0.560536 | 4_4:-61031465 | Msa0692480:CDS |
CAGGTTCACGAAAAGAGAAT+GGG | 0.560835 | 4_4:+61030141 | Msa0692470:CDS |
ATCAAAATGGAACCCTTCCA+TGG | 0.561331 | 4_4:+61030094 | Msa0692470:CDS |
CAATGTAAATCTGTGTCTCC+CGG | 0.564211 | 4_4:-61029409 | None:intergenic |
TTTCCTTCTCTCTCCATGAA+GGG | 0.565721 | 4_4:-61029301 | None:intergenic |
CCCTCATGAGTGCCTTTGTG+AGG | 0.571802 | 4_4:+61030227 | Msa0692470:CDS |
TCTAAGAGTGTCCTGCAATG+GGG | 0.572836 | 4_4:+61027894 | Msa0692470:CDS |
CAACTATACTGAATTTGGTG+GGG | 0.573463 | 4_4:-61030518 | Msa0692480:three_prime_UTR |
ACACAGATTTACATTGCAGC+CGG | 0.575721 | 4_4:+61029416 | Msa0692470:CDS |
GGGTCTATGTCCTTTGACAC+CGG | 0.576261 | 4_4:+61029349 | Msa0692470:CDS |
ACAATGATTCGACGATAAGT+CGG | 0.577569 | 4_4:-61030168 | Msa0692480:three_prime_UTR |
TATAACCGCCCTCTTCCAGA+AGG | 0.578293 | 4_4:-61031548 | Msa0692480:CDS |
CTCTAAGAACTTATGCCCGA+GGG | 0.578429 | 4_4:-61030382 | Msa0692480:three_prime_UTR |
GTGACATGGTGACAATTGCT+CGG | 0.579350 | 4_4:+61028029 | Msa0692470:CDS |
TGGGAACATGGCAAAACTTG+TGG | 0.580054 | 4_4:+61029880 | Msa0692470:CDS |
ATGATCATCTGTAGTCACTC+TGG | 0.581191 | 4_4:+61032190 | Msa0692470:three_prime_UTR |
GATCATGCTTATGAAGTCAA+AGG | 0.581508 | 4_4:-61032173 | Msa0692480:CDS |
TAGGTGCCGTGTTAATTACC+AGG | 0.582283 | 4_4:+61028858 | Msa0692470:CDS |
AGATCTCATCAATTTGCCGC+AGG | 0.582417 | 4_4:+61031016 | Msa0692470:three_prime_UTR |
GATTCAGATACTTCGCGAGA+GGG | 0.583952 | 4_4:+61028924 | Msa0692470:CDS |
TATCTGAGATTAGTAGCACT+AGG | 0.584493 | 4_4:-61031515 | Msa0692480:CDS |
GTTCATTCTCTATGTAATCA+CGG | 0.584697 | 4_4:+61030591 | Msa0692470:three_prime_UTR |
ATATGCATACACCTTGACAC+TGG | 0.586569 | 4_4:-61031660 | Msa0692480:CDS |
TGTAGACAAACCAAAGGAGG+AGG | 0.587728 | 4_4:+61030188 | Msa0692470:CDS |
CTCGGATATCCCCAGTGTCA+AGG | 0.587901 | 4_4:+61031649 | Msa0692470:three_prime_UTR |
TACAAACTCATTCCATGGAA+GGG | 0.592326 | 4_4:-61030106 | Msa0692480:three_prime_UTR |
GGTAGGAATAAAGGTGTCAC+CGG | 0.594798 | 4_4:-61029852 | None:intergenic |
ACAAAGGCACTCATGAGGGT+TGG | 0.596296 | 4_4:-61030223 | Msa0692480:three_prime_UTR |
CCCTCACAAAGGCACTCATG+AGG | 0.597403 | 4_4:-61030228 | Msa0692480:three_prime_UTR |
TAGCAGTCGGAATAAGAGAA+GGG | 0.598131 | 4_4:-61031050 | Msa0692480:CDS |
AAGAACTTATGCCCGAGGGA+AGG | 0.599553 | 4_4:-61030378 | Msa0692480:three_prime_UTR |
CATTCAATCAACCTTTAAAG+GGG | 0.599650 | 4_4:-61030755 | Msa0692480:three_prime_UTR |
GTAGACGTTGCTGAGACCAA+TGG | 0.600772 | 4_4:-61031602 | Msa0692480:CDS |
TCAAGGCTTGCAATAGCAGT+CGG | 0.600784 | 4_4:-61031063 | Msa0692480:CDS |
CACACTTTGTTCCCTCACAA+AGG | 0.600880 | 4_4:-61030239 | Msa0692480:three_prime_UTR |
AACTTGTGGAAGGCCACCGC+AGG | 0.602466 | 4_4:+61029894 | Msa0692470:CDS |
CCTCACAAAGGCACTCATGA+GGG | 0.602588 | 4_4:-61030227 | Msa0692480:three_prime_UTR |
TGGAATATTATCAAGAAAGG+AGG | 0.602703 | 4_4:-61030963 | Msa0692480:CDS |
GCCATGTTCCCATCATAGGT+AGG | 0.602990 | 4_4:-61029869 | None:intergenic |
CCCCTCAAATTGAGAATCTG+GGG | 0.605300 | 4_4:+61028893 | Msa0692470:CDS |
CTCCTGCCTTGACAGAAAGG+GGG | 0.606795 | 4_4:+61032105 | Msa0692470:three_prime_UTR |
ACAACTCAACGGCCTCCTCA+AGG | 0.607711 | 4_4:+61026636 | Msa0692470:CDS |
ATTCTGTGGACACAATTTGG+TGG | 0.607748 | 4_4:+61026126 | Msa0692470:five_prime_UTR |
ATAGCAGTCGGAATAAGAGA+AGG | 0.608578 | 4_4:-61031051 | Msa0692480:CDS |
AACATGGCAAAACTTGTGGA+AGG | 0.609196 | 4_4:+61029884 | Msa0692470:CDS |
CCTCATGAGTGCCTTTGTGA+GGG | 0.609759 | 4_4:+61030228 | Msa0692470:CDS |
TTATCAAGAAAGGAGGCTCA+AGG | 0.609776 | 4_4:-61030956 | Msa0692480:CDS |
TCCTACCTATGATGGGAACA+TGG | 0.610654 | 4_4:+61029868 | Msa0692470:CDS |
TCTCTAAGAACTTATGCCCG+AGG | 0.611187 | 4_4:-61030383 | Msa0692480:three_prime_UTR |
GGGTTGTAATAATTGTGGCC+GGG | 0.612240 | 4_4:+61030713 | Msa0692470:three_prime_UTR |
TTTGAATCAAATGCGTGCAG+CGG | 0.612731 | 4_4:+61027918 | Msa0692470:CDS |
ACAAAGTGTGATGATTTGCT+AGG | 0.614058 | 4_4:+61030252 | Msa0692470:CDS |
AATGGAAGTTAGATCATCAG+AGG | 0.614061 | 4_4:+61026425 | Msa0692470:exon |
GGCATTTCAGATTTGTGACA+TGG | 0.614628 | 4_4:+61028015 | Msa0692470:intron |
CATTGTAGACAAACCAAAGG+AGG | 0.615228 | 4_4:+61030185 | Msa0692470:CDS |
TTCACCACCATAAATCTCAC+CGG | 0.615230 | 4_4:-61029435 | None:intergenic |
ACTGTTGTTTGTATCTCTTG+AGG | 0.620279 | 4_4:-61030840 | Msa0692480:three_prime_UTR |
GGTGAAAGTGGTGATGTCCT+TGG | 0.620946 | 4_4:-61030919 | Msa0692480:CDS |
TCATTTGACCAGCTAACAGG+AGG | 0.621119 | 4_4:-61028322 | None:intergenic |
AGGAATTGAGGAACAAGGTG+AGG | 0.623145 | 4_4:-61026038 | None:intergenic |
ACCTAAGGCTTGCATAACCA+AGG | 0.627242 | 4_4:-61029381 | None:intergenic |
GGTTGTGTGATAACCAGCAA+GGG | 0.628035 | 4_4:+61031367 | Msa0692470:three_prime_UTR |
TGGTTGTGTGATAACCAGCA+AGG | 0.629031 | 4_4:+61031366 | Msa0692470:three_prime_UTR |
GTATATATCACACAACTCAA+CGG | 0.629814 | 4_4:+61026625 | Msa0692470:CDS |
GAAAAGTGGATACTCGACCC+TGG | 0.636896 | 4_4:+61028294 | Msa0692470:CDS |
AGCAGTCGGAATAAGAGAAG+GGG | 0.636940 | 4_4:-61031049 | Msa0692480:CDS |
AATCATTGTAGACAAACCAA+AGG | 0.637419 | 4_4:+61030182 | Msa0692470:CDS |
ATTCAGATACTTCGCGAGAG+GGG | 0.637675 | 4_4:+61028925 | Msa0692470:CDS |
GAACTGCTGTAACTCATCAA+GGG | 0.638982 | 4_4:-61029780 | None:intergenic |
GAAGCATCCCTTCTGGAAGA+GGG | 0.639736 | 4_4:+61031540 | Msa0692470:three_prime_UTR |
ATACTAGCTCCTCATTATCA+CGG | 0.640006 | 4_4:+61031420 | Msa0692470:three_prime_UTR |
ATATAAGGAATTGAGGAACA+AGG | 0.641155 | 4_4:-61026043 | None:intergenic |
TCTGAAGAAAGGAGATCCCA+GGG | 0.644505 | 4_4:+61029329 | Msa0692470:CDS |
TGTCAAAGGACATAGACCCT+GGG | 0.644623 | 4_4:-61029345 | None:intergenic |
TTTGTTCAACCATTGTGCTG+TGG | 0.645471 | 4_4:+61026532 | Msa0692470:CDS |
TGGTTGTGAAAAGTGTGTGA+AGG | 0.647524 | 4_4:+61026364 | Msa0692470:five_prime_UTR |
CTGTAGTCACTCTGGCACTG+TGG | 0.648083 | 4_4:+61032198 | Msa0692470:three_prime_UTR |
TGATTCAGATACTTCGCGAG+AGG | 0.649037 | 4_4:+61028923 | Msa0692470:CDS |
ATTCCCTTCATGGAGAGAGA+AGG | 0.650807 | 4_4:+61029298 | Msa0692470:CDS |
TGAAGGTTATGGTGATGAAG+TGG | 0.651256 | 4_4:+61026381 | Msa0692470:five_prime_UTR |
CTTGCAGGAAGTAGAATGGG+AGG | 0.651294 | 4_4:-61026681 | None:intergenic |
GTAATGGGTTGTAATAATTG+TGG | 0.651529 | 4_4:+61030708 | Msa0692470:three_prime_UTR |
ATAACCGCCCTCTTCCAGAA+GGG | 0.651691 | 4_4:-61031547 | Msa0692480:CDS |
TGATTCCAATAAGAAAGCAT+CGG | 0.654051 | 4_4:+61031487 | Msa0692470:three_prime_UTR |
AATATAACATCTCCTTGAGG+AGG | 0.657753 | 4_4:-61026648 | None:intergenic |
TAAGTGCCTGGTAATTAACA+CGG | 0.657828 | 4_4:-61028864 | None:intergenic |
ATGGAAGTTAGATCATCAGA+GGG | 0.666260 | 4_4:+61026426 | Msa0692470:CDS |
TTGCACTAATGAAGAAGCCG+AGG | 0.669813 | 4_4:+61029014 | Msa0692470:CDS |
TCTGAGATTAGTAGCACTAG+GGG | 0.673869 | 4_4:-61031513 | Msa0692480:CDS |
CTGTTCAGAGACTCCATCTG+GGG | 0.675062 | 4_4:-61031464 | Msa0692480:CDS |
CAAACATGTCCACAGCACAA+TGG | 0.677892 | 4_4:-61026541 | None:intergenic |
TGTGTGATAACCAGCAAGGG+CGG | 0.678647 | 4_4:+61031370 | Msa0692470:three_prime_UTR |
AAGAAGCCGAGGATCTCAAG+CGG | 0.678663 | 4_4:+61029025 | Msa0692470:CDS |
GCTAACAGGAGGCATCTCCA+GGG | 0.682429 | 4_4:-61028311 | None:intergenic |
ATTGCATCTGAGATATGAGA+TGG | 0.683390 | 4_4:+61028960 | Msa0692470:CDS |
ATGCATACACCTTGACACTG+GGG | 0.698561 | 4_4:-61031658 | Msa0692480:CDS |
TCTATGTCCTTTGACACCGG+AGG | 0.698582 | 4_4:+61029352 | Msa0692470:CDS |
GCAAATATAACATCTCCTTG+AGG | 0.698776 | 4_4:-61026651 | None:intergenic |
GTTCCGGAACAACCAATGTG+AGG | 0.701296 | 4_4:-61028060 | None:intergenic |
GCATCCCTTCTGGAAGAGGG+CGG | 0.703925 | 4_4:+61031543 | Msa0692470:three_prime_UTR |
GCAGCCGGTGAGATTTATGG+TGG | 0.721413 | 4_4:+61029431 | Msa0692470:CDS |
GAGTAAATAGATACCTGCGG+TGG | 0.724695 | 4_4:-61029907 | None:intergenic |
CTGAGATTAGTAGCACTAGG+GGG | 0.740933 | 4_4:-61031512 | Msa0692480:CDS |
TGAGGAGCTAGTATGCAAAG+CGG | 0.776917 | 4_4:-61031411 | Msa0692480:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATTTTAAAAGACTTTAA+CGG | + | chr4_4:61025761-61025780 | Msa0692470:five_prime_UTR | 10.0% |
!!! | TTTTAAGAAAGAAAAATATA+AGG | - | chr4_4:61026061-61026080 | None:intergenic | 10.0% |
!!! | TTTAACTTTAAAAGTAATTA+TGG | - | chr4_4:61026947-61026966 | None:intergenic | 10.0% |
!!! | AATAAGATATATATTTCTTT+TGG | - | chr4_4:61029996-61030015 | None:intergenic | 10.0% |
!! | AAAAAAAGAGATTACAAAAT+GGG | - | chr4_4:61025730-61025749 | None:intergenic | 15.0% |
!! | ATTTAGCAATAATAGTAATA+TGG | + | chr4_4:61026833-61026852 | Msa0692470:intron | 15.0% |
!!! | TAAATGGATTTATTGATTTT+TGG | - | chr4_4:61027373-61027392 | None:intergenic | 15.0% |
!!! | AATTTTCCTTTAAATATGAT+AGG | + | chr4_4:61027524-61027543 | Msa0692470:intron | 15.0% |
!!! | AAGTTGTTTTTTTTTTATTC+TGG | + | chr4_4:61028175-61028194 | Msa0692470:intron | 15.0% |
!! | TGAAAAGATATACATAAAAA+AGG | - | chr4_4:61029083-61029102 | None:intergenic | 15.0% |
!!! | ATATTTCTTTTGGAAATTTA+GGG | - | chr4_4:61029986-61030005 | None:intergenic | 15.0% |
!!! | TATATTTCTTTTGGAAATTT+AGG | - | chr4_4:61029987-61030006 | None:intergenic | 15.0% |
!! | ATAGACATTTCAAATATTCT+TGG | - | chr4_4:61025691-61025710 | None:intergenic | 20.0% |
!! | GAAAAAAAGAGATTACAAAA+TGG | - | chr4_4:61025731-61025750 | None:intergenic | 20.0% |
!!! | ATTTTTATTCACATTCAAGT+GGG | - | chr4_4:61025958-61025977 | None:intergenic | 20.0% |
!! | AAGAAAAATATAAGGAATTG+AGG | - | chr4_4:61026053-61026072 | None:intergenic | 20.0% |
!! | TTGCTAAATTAAATCATATG+TGG | - | chr4_4:61026822-61026841 | None:intergenic | 20.0% |
!! | ATGGATTTAATGTATATTCA+CGG | + | chr4_4:61026852-61026871 | Msa0692470:intron | 20.0% |
!! | TCTAATAAAAACACAATGTT+AGG | - | chr4_4:61027038-61027057 | None:intergenic | 20.0% |
!!! | AACATTGTGTTTTTATTAGA+TGG | + | chr4_4:61027038-61027057 | Msa0692470:intron | 20.0% |
!!! | AAAAAAATTCTTTTCCCAAA+GGG | - | chr4_4:61027114-61027133 | None:intergenic | 20.0% |
!!! | AAAAAAAATTCTTTTCCCAA+AGG | - | chr4_4:61027115-61027134 | None:intergenic | 20.0% |
!!! | GGGAAAAGAATTTTTTTTTT+TGG | + | chr4_4:61027117-61027136 | Msa0692470:intron | 20.0% |
!!! | CAACAATAGTTTAAAATAAG+TGG | - | chr4_4:61027449-61027468 | None:intergenic | 20.0% |
!!! | AAAGTACCTATCATATTTAA+AGG | - | chr4_4:61027533-61027552 | None:intergenic | 20.0% |
!! | ACATAAGTAAGTGTAATATT+GGG | - | chr4_4:61027681-61027700 | None:intergenic | 20.0% |
!! | AACATAAGTAAGTGTAATAT+TGG | - | chr4_4:61027682-61027701 | None:intergenic | 20.0% |
!! | ATATAATAGGAATAAAGAAG+TGG | - | chr4_4:61027965-61027984 | None:intergenic | 20.0% |
!! | ATTGAAGCTTATCATATAAT+AGG | - | chr4_4:61027978-61027997 | None:intergenic | 20.0% |
!! | TTATGTATAATACATCAATC+AGG | + | chr4_4:61028399-61028418 | Msa0692470:intron | 20.0% |
!!! | AAAAGTACAAGTTTATGATA+TGG | + | chr4_4:61028567-61028586 | Msa0692470:intron | 20.0% |
!!! | TAGTATTTTAGCAACTAAAA+TGG | + | chr4_4:61028598-61028617 | Msa0692470:intron | 20.0% |
!! | ATATGTACTACTGAAAATAA+GGG | - | chr4_4:61028713-61028732 | None:intergenic | 20.0% |
!! | TATATGTACTACTGAAAATA+AGG | - | chr4_4:61028714-61028733 | None:intergenic | 20.0% |
!! | TCAATACTATAAACAAAAAG+GGG | - | chr4_4:61029526-61029545 | None:intergenic | 20.0% |
!! | GTCAATACTATAAACAAAAA+GGG | - | chr4_4:61029527-61029546 | None:intergenic | 20.0% |
!! | TGTCAATACTATAAACAAAA+AGG | - | chr4_4:61029528-61029547 | None:intergenic | 20.0% |
!!! | TTTACTTTAGGTTAAAAAAG+AGG | + | chr4_4:61029748-61029767 | Msa0692470:intron | 20.0% |
!!! | TTTTAAAAAGTCCATCTTAT+TGG | + | chr4_4:61030038-61030057 | Msa0692470:CDS | 20.0% |
!!! | TTTTGTATACATGATTTTGT+AGG | + | chr4_4:61030407-61030426 | Msa0692470:three_prime_UTR | 20.0% |
!! | TTATACAACTATACTGAATT+TGG | - | chr4_4:61030526-61030545 | Msa0692480:three_prime_UTR | 20.0% |
!! | TGTAATGAAATATATAGACA+CGG | + | chr4_4:61031254-61031273 | Msa0692470:intron | 20.0% |
!!! | TGCTTTTGTTTAAATCATAT+TGG | + | chr4_4:61031732-61031751 | Msa0692470:three_prime_UTR | 20.0% |
! | AGCAAGTTCTTAATCATTAT+TGG | - | chr4_4:61025649-61025668 | None:intergenic | 25.0% |
!!! | ATTTTAAAAGACTTTAACGG+TGG | + | chr4_4:61025764-61025783 | Msa0692470:five_prime_UTR | 25.0% |
!!! | AATTTTCTTTCTAGTTAACC+TGG | + | chr4_4:61025793-61025812 | Msa0692470:five_prime_UTR | 25.0% |
!! | CATTTTTATTCACATTCAAG+TGG | - | chr4_4:61025959-61025978 | None:intergenic | 25.0% |
!! | TTGCAGATTTGTGTTAATTT+TGG | + | chr4_4:61026344-61026363 | Msa0692470:intron | 25.0% |
! | AGTAAATCCAGTAAAGAAAT+TGG | - | chr4_4:61026601-61026620 | None:intergenic | 25.0% |
!! | CAAACATTTTAAATGATCTG+AGG | - | chr4_4:61026917-61026936 | None:intergenic | 25.0% |
!!! | TTTTCTGCTTGTTATATAGT+AGG | + | chr4_4:61027140-61027159 | Msa0692470:intron | 25.0% |
! | GATGGTCAATATCAATTAAT+TGG | - | chr4_4:61027229-61027248 | None:intergenic | 25.0% |
!!! | TATTGACCATCATGTTTTTT+TGG | + | chr4_4:61027238-61027257 | Msa0692470:intron | 25.0% |
!!! | GATTTTTGGTTAGAATCTAA+TGG | - | chr4_4:61027359-61027378 | None:intergenic | 25.0% |
! | CATAAGTAAGTGTAATATTG+GGG | - | chr4_4:61027680-61027699 | None:intergenic | 25.0% |
!!! | ATGCAAGATAGTTTTACATA+AGG | + | chr4_4:61027717-61027736 | Msa0692470:intron | 25.0% |
!!! | TGCAAGATAGTTTTACATAA+GGG | + | chr4_4:61027718-61027737 | Msa0692470:intron | 25.0% |
! | ACAAAATACTTATACGTAGA+TGG | + | chr4_4:61027755-61027774 | Msa0692470:intron | 25.0% |
! | CAAAATACTTATACGTAGAT+GGG | + | chr4_4:61027756-61027775 | Msa0692470:intron | 25.0% |
! | CAATGTTTAATTACCAGATT+TGG | + | chr4_4:61027994-61028013 | Msa0692470:intron | 25.0% |
!! | AACTTGATAAGAAATCCTTT+TGG | + | chr4_4:61028080-61028099 | Msa0692470:CDS | 25.0% |
!! | ACTTGATAAGAAATCCTTTT+GGG | + | chr4_4:61028081-61028100 | Msa0692470:CDS | 25.0% |
! | CATAACAAATGATATACCTA+CGG | - | chr4_4:61028111-61028130 | None:intergenic | 25.0% |
!!! | TTTTTTTTTTATTCTGGCAG+TGG | + | chr4_4:61028181-61028200 | Msa0692470:intron | 25.0% |
!! | CTTTTCCTAGTAAACTTTTT+GGG | - | chr4_4:61028280-61028299 | None:intergenic | 25.0% |
!! | ACTTTTCCTAGTAAACTTTT+TGG | - | chr4_4:61028281-61028300 | None:intergenic | 25.0% |
! | AAAAAGTTTACTAGGAAAAG+TGG | + | chr4_4:61028280-61028299 | Msa0692470:CDS | 25.0% |
!!! | GTCAAATGAAAAGTATTACT+TGG | + | chr4_4:61028336-61028355 | Msa0692470:CDS | 25.0% |
! | TTAAAGTTTGATACAGTGAT+TGG | + | chr4_4:61028441-61028460 | Msa0692470:intron | 25.0% |
! | TGGTTAATGATTCTTTGATA+TGG | + | chr4_4:61028461-61028480 | Msa0692470:intron | 25.0% |
!! | TTTAGAGTTATTAGCAGATA+TGG | + | chr4_4:61028501-61028520 | Msa0692470:intron | 25.0% |
!!! | AACAATGATAAAGTGCTTTT+TGG | - | chr4_4:61028653-61028672 | None:intergenic | 25.0% |
! | TAAGTTTCTGTAGATCAATT+GGG | - | chr4_4:61028840-61028859 | None:intergenic | 25.0% |
!! | TATATCTTTTCATGAGCAAT+AGG | + | chr4_4:61029091-61029110 | Msa0692470:intron | 25.0% |
! | GCAACACAAATTATAAAAGA+AGG | - | chr4_4:61029118-61029137 | None:intergenic | 25.0% |
! | ATTCCACTTTACTTTACTTT+AGG | + | chr4_4:61029736-61029755 | Msa0692470:intron | 25.0% |
! | TAACCTAAAGTAAAGTAAAG+TGG | - | chr4_4:61029742-61029761 | None:intergenic | 25.0% |
!! | TTAGGTTAAAAAAGAGGTAT+TGG | + | chr4_4:61029754-61029773 | Msa0692470:intron | 25.0% |
! | ATCTAATATAGAAGCTATTC+TGG | + | chr4_4:61029947-61029966 | Msa0692470:intron | 25.0% |
!!! | TAAGATGGACTTTTTAAAAC+CGG | - | chr4_4:61030037-61030056 | Msa0692480:three_prime_UTR | 25.0% |
! | GAAATATATGTTCCATATAG+AGG | + | chr4_4:61030456-61030475 | Msa0692470:three_prime_UTR | 25.0% |
!!! | AAGATTAGAAGTATTTTGCA+AGG | + | chr4_4:61030893-61030912 | Msa0692470:three_prime_UTR | 25.0% |
! | AGTTGGAATATTATCAAGAA+AGG | - | chr4_4:61030969-61030988 | Msa0692480:CDS | 25.0% |
!! | TTTCTTGATAATATTCCAAC+TGG | + | chr4_4:61030968-61030987 | Msa0692470:three_prime_UTR | 25.0% |
! | GGTAATAAACTATACATTCA+GGG | - | chr4_4:61031339-61031358 | Msa0692480:intron | 25.0% |
! | AGGTAATAAACTATACATTC+AGG | - | chr4_4:61031340-61031359 | Msa0692480:intron | 25.0% |
! | ATAGTTTATTACCTGTTCAA+TGG | + | chr4_4:61031346-61031365 | Msa0692470:intron | 25.0% |
! | ATGAAAAGAAACATATGAAG+AGG | + | chr4_4:61032063-61032082 | Msa0692470:intron | 25.0% |
!!! | CAGTTTTTTAATTGTGTGCA+TGG | - | chr4_4:61025851-61025870 | None:intergenic | 30.0% |
ATGGAAAGAAAGGATCAAAT+CGG | - | chr4_4:61026007-61026026 | None:intergenic | 30.0% | |
ATATAAGGAATTGAGGAACA+AGG | - | chr4_4:61026046-61026065 | None:intergenic | 30.0% | |
GAATAAACCAAACACGAAAA+CGG | - | chr4_4:61026509-61026528 | None:intergenic | 30.0% | |
GTATATATCACACAACTCAA+CGG | + | chr4_4:61026625-61026644 | Msa0692470:CDS | 30.0% | |
! | AGATAGAAAAACTAACTTGC+AGG | - | chr4_4:61026699-61026718 | None:intergenic | 30.0% |
!! | AATGTTTTTGTTTGCTTGAG+TGG | + | chr4_4:61026740-61026759 | Msa0692470:intron | 30.0% |
! | TATGTGTTGATAAACCCTTT+GGG | + | chr4_4:61027097-61027116 | Msa0692470:intron | 30.0% |
CAAAGCAAATAATCTCTAAC+AGG | - | chr4_4:61027268-61027287 | None:intergenic | 30.0% | |
AGACTTCACTCTAAACTAAA+TGG | - | chr4_4:61027389-61027408 | None:intergenic | 30.0% | |
!!! | ATAAGTGGATCCACTTTTTT+GGG | - | chr4_4:61027434-61027453 | None:intergenic | 30.0% |
!!! | AATAAGTGGATCCACTTTTT+TGG | - | chr4_4:61027435-61027454 | None:intergenic | 30.0% |
AAATTCTACTGAACAGCTAA+AGG | - | chr4_4:61027509-61027528 | None:intergenic | 30.0% | |
TATATACAAGGACTCATACA+GGG | - | chr4_4:61027598-61027617 | None:intergenic | 30.0% | |
TTATATACAAGGACTCATAC+AGG | - | chr4_4:61027599-61027618 | None:intergenic | 30.0% | |
TGATGGGGATATTATATACA+AGG | - | chr4_4:61027610-61027629 | None:intergenic | 30.0% | |
GCAGGAAATTATACTAGTAA+TGG | + | chr4_4:61027868-61027887 | Msa0692470:intron | 30.0% | |
TAATAGGAATAAAGAAGTGG+TGG | - | chr4_4:61027962-61027981 | None:intergenic | 30.0% | |
AAGGATTTCTTATCAAGTTC+CGG | - | chr4_4:61028079-61028098 | None:intergenic | 30.0% | |
GTACAAGTTTATGATATGGA+TGG | + | chr4_4:61028571-61028590 | Msa0692470:intron | 30.0% | |
CTAAGTTTCTGTAGATCAAT+TGG | - | chr4_4:61028841-61028860 | None:intergenic | 30.0% | |
CAATTGATCTACAGAAACTT+AGG | + | chr4_4:61028839-61028858 | Msa0692470:CDS | 30.0% | |
! | TAAAAAAGGCATAGCAAAAC+AGG | - | chr4_4:61029069-61029088 | None:intergenic | 30.0% |
!! | GTTGCATGATTTGTTGAATT+TGG | + | chr4_4:61029133-61029152 | Msa0692470:intron | 30.0% |
! | ATTAAGAGTCTTGTGTTCAA+AGG | + | chr4_4:61029200-61029219 | Msa0692470:intron | 30.0% |
! | AATGGTGAACTCACAATTTT+TGG | - | chr4_4:61029491-61029510 | None:intergenic | 30.0% |
ACTATAAACAAAAAGGGGAA+GGG | - | chr4_4:61029521-61029540 | None:intergenic | 30.0% | |
TACTATAAACAAAAAGGGGA+AGG | - | chr4_4:61029522-61029541 | None:intergenic | 30.0% | |
TTAGGATGAAGAAATGCATA+AGG | - | chr4_4:61029691-61029710 | None:intergenic | 30.0% | |
TTGCTTGATATGCATCAAAA+TGG | + | chr4_4:61030081-61030100 | Msa0692470:CDS | 30.0% | |
AATCATTGTAGACAAACCAA+AGG | + | chr4_4:61030182-61030201 | Msa0692470:CDS | 30.0% | |
! | ATGATTTTGTAGGAAACCAT+GGG | + | chr4_4:61030417-61030436 | Msa0692470:three_prime_UTR | 30.0% |
!! | CTATTTTTCTTTTTTCCCCA+TGG | - | chr4_4:61030436-61030455 | Msa0692480:three_prime_UTR | 30.0% |
CATGGGGAAAAAAGAAAAAT+AGG | + | chr4_4:61030434-61030453 | Msa0692470:three_prime_UTR | 30.0% | |
ACAACTATACTGAATTTGGT+GGG | - | chr4_4:61030522-61030541 | Msa0692480:three_prime_UTR | 30.0% | |
TACAACTATACTGAATTTGG+TGG | - | chr4_4:61030523-61030542 | Msa0692480:three_prime_UTR | 30.0% | |
GTTCATTCTCTATGTAATCA+CGG | + | chr4_4:61030591-61030610 | Msa0692470:three_prime_UTR | 30.0% | |
!! | GTAATGGGTTGTAATAATTG+TGG | + | chr4_4:61030708-61030727 | Msa0692470:three_prime_UTR | 30.0% |
! | CATTCAATCAACCTTTAAAG+GGG | - | chr4_4:61030758-61030777 | Msa0692480:three_prime_UTR | 30.0% |
GCATTCAATCAACCTTTAAA+GGG | - | chr4_4:61030759-61030778 | Msa0692480:three_prime_UTR | 30.0% | |
TGCATTCAATCAACCTTTAA+AGG | - | chr4_4:61030760-61030779 | Msa0692480:three_prime_UTR | 30.0% | |
AACAACAGTATGTCATTAAC+TGG | + | chr4_4:61030854-61030873 | Msa0692470:three_prime_UTR | 30.0% | |
CAAAATACTTCTAATCTTGC+AGG | - | chr4_4:61030891-61030910 | Msa0692480:exon | 30.0% | |
TGGAATATTATCAAGAAAGG+AGG | - | chr4_4:61030966-61030985 | Msa0692480:CDS | 30.0% | |
! | TTGCATTTTACGTAGTACAT+GGG | - | chr4_4:61031188-61031207 | Msa0692480:intron | 30.0% |
! | ATTGCATTTTACGTAGTACA+TGG | - | chr4_4:61031189-61031208 | Msa0692480:intron | 30.0% |
TATTCTCATTACCATCATGT+TGG | + | chr4_4:61031311-61031330 | Msa0692470:intron | 30.0% | |
! | TGATTCCAATAAGAAAGCAT+CGG | + | chr4_4:61031487-61031506 | Msa0692470:three_prime_UTR | 30.0% |
TCTACTTTGTCGTCAAAAAA+AGG | + | chr4_4:61031620-61031639 | Msa0692470:three_prime_UTR | 30.0% | |
CTACTTTGTCGTCAAAAAAA+GGG | + | chr4_4:61031621-61031640 | Msa0692470:three_prime_UTR | 30.0% | |
! | TTTTCATGCTTCTCAATTCT+TGG | - | chr4_4:61031805-61031824 | Msa0692480:intron | 30.0% |
! | ATGCTTCTTTTTCCTTGATA+TGG | + | chr4_4:61031923-61031942 | Msa0692470:three_prime_UTR | 30.0% |
AATTGTGTGCATGGATTCAA+AGG | - | chr4_4:61025842-61025861 | None:intergenic | 35.0% | |
TCGGAGAAAAATCACAAAGA+AGG | - | chr4_4:61025988-61026007 | None:intergenic | 35.0% | |
TCCTTTCTTTCCATTCTCAT+TGG | + | chr4_4:61026013-61026032 | Msa0692470:five_prime_UTR | 35.0% | |
TCCAATGAGAATGGAAAGAA+AGG | - | chr4_4:61026017-61026036 | None:intergenic | 35.0% | |
TTGAAGAGCTTCAAATTCTG+TGG | + | chr4_4:61026112-61026131 | Msa0692470:five_prime_UTR | 35.0% | |
CAAATTCTGTGGACACAATT+TGG | + | chr4_4:61026123-61026142 | Msa0692470:five_prime_UTR | 35.0% | |
! | AATTTGAAGCTGGTGATTGA+GGG | - | chr4_4:61026177-61026196 | None:intergenic | 35.0% |
ACCAGCTTCAAATTCAATTC+TGG | + | chr4_4:61026183-61026202 | Msa0692470:five_prime_UTR | 35.0% | |
CCAGCTTCAAATTCAATTCT+GGG | + | chr4_4:61026184-61026203 | Msa0692470:five_prime_UTR | 35.0% | |
CTTCAAATTCAATTCTGGGT+CGG | + | chr4_4:61026188-61026207 | Msa0692470:five_prime_UTR | 35.0% | |
! | AAGTGAATCTCACTGTTTTG+AGG | - | chr4_4:61026233-61026252 | None:intergenic | 35.0% |
TCACTTTGTTGCAGTGTTTA+AGG | + | chr4_4:61026247-61026266 | Msa0692470:five_prime_UTR | 35.0% | |
TACATTGCAAAGTGACTCTA+TGG | - | chr4_4:61026290-61026309 | None:intergenic | 35.0% | |
! | TGAAAAGTGTGTGAAGGTTA+TGG | + | chr4_4:61026370-61026389 | Msa0692470:five_prime_UTR | 35.0% |
TGAAGTGTGTGACAAAGAAA+TGG | + | chr4_4:61026407-61026426 | Msa0692470:exon | 35.0% | |
AATGGAAGTTAGATCATCAG+AGG | + | chr4_4:61026425-61026444 | Msa0692470:exon | 35.0% | |
ATGGAAGTTAGATCATCAGA+GGG | + | chr4_4:61026426-61026445 | Msa0692470:CDS | 35.0% | |
TGGCATTCCAATTTCTTTAC+TGG | + | chr4_4:61026591-61026610 | Msa0692470:CDS | 35.0% | |
AATATAACATCTCCTTGAGG+AGG | - | chr4_4:61026651-61026670 | None:intergenic | 35.0% | |
GCAAATATAACATCTCCTTG+AGG | - | chr4_4:61026654-61026673 | None:intergenic | 35.0% | |
! | TAACTTGCAGGAAGTAGAAT+GGG | - | chr4_4:61026687-61026706 | None:intergenic | 35.0% |
ATCATGCTTAGCTGAATGTT+GGG | + | chr4_4:61027066-61027085 | Msa0692470:intron | 35.0% | |
! | GTATGTGTTGATAAACCCTT+TGG | + | chr4_4:61027096-61027115 | Msa0692470:intron | 35.0% |
GTAGATTTGTGTGAAGAAAC+AGG | + | chr4_4:61027166-61027185 | Msa0692470:intron | 35.0% | |
ATTTGTGTGAAGAAACAGGT+AGG | + | chr4_4:61027170-61027189 | Msa0692470:intron | 35.0% | |
GGAAGTCCAAAAAAACATGA+TGG | - | chr4_4:61027247-61027266 | None:intergenic | 35.0% | |
!! | ATTTGCTTTGTTGCGTTTTG+TGG | + | chr4_4:61027278-61027297 | Msa0692470:intron | 35.0% |
GGGGTACACTAAAAAGATTA+GGG | - | chr4_4:61027414-61027433 | None:intergenic | 35.0% | |
TGGGGTACACTAAAAAGATT+AGG | - | chr4_4:61027415-61027434 | None:intergenic | 35.0% | |
TTTAGTGTACCCCAAAAAAG+TGG | + | chr4_4:61027421-61027440 | Msa0692470:intron | 35.0% | |
!!! | TAAGTGGATCCACTTTTTTG+GGG | - | chr4_4:61027433-61027452 | None:intergenic | 35.0% |
ATTTGCTTTCTGTTAAGTGC+TGG | - | chr4_4:61027639-61027658 | None:intergenic | 35.0% | |
! | TACTTATACGTAGATGGGTT+TGG | + | chr4_4:61027761-61027780 | Msa0692470:intron | 35.0% |
! | TAAAGAAGTGGTGGAAGAAT+AGG | - | chr4_4:61027953-61027972 | None:intergenic | 35.0% |
! | CAAATCTGAAATGCCAAATC+TGG | - | chr4_4:61028010-61028029 | None:intergenic | 35.0% |
GAGTTCCCAAAAAGTTTACT+AGG | + | chr4_4:61028272-61028291 | Msa0692470:CDS | 35.0% | |
! | TTTTCATTTGACCAGCTAAC+AGG | - | chr4_4:61028328-61028347 | None:intergenic | 35.0% |
!! | TGAAAAGTATTACTTGGAGC+AGG | + | chr4_4:61028342-61028361 | Msa0692470:CDS | 35.0% |
TACTGAAAATAAGGGAAGAG+GGG | - | chr4_4:61028705-61028724 | None:intergenic | 35.0% | |
CTACTGAAAATAAGGGAAGA+GGG | - | chr4_4:61028706-61028725 | None:intergenic | 35.0% | |
ACTACTGAAAATAAGGGAAG+AGG | - | chr4_4:61028707-61028726 | None:intergenic | 35.0% | |
TAAGTGCCTGGTAATTAACA+CGG | - | chr4_4:61028867-61028886 | None:intergenic | 35.0% | |
! | ATTGCATCTGAGATATGAGA+TGG | + | chr4_4:61028960-61028979 | Msa0692470:CDS | 35.0% |
GTAATGATCTGACAAATGAG+AGG | + | chr4_4:61029228-61029247 | Msa0692470:intron | 35.0% | |
AGGAAATAGTGTCTGAAGAA+AGG | + | chr4_4:61029318-61029337 | Msa0692470:CDS | 35.0% | |
!! | AATCCAAGTGCTGAAAAATG+GGG | - | chr4_4:61029632-61029651 | None:intergenic | 35.0% |
!! | CAATCCAAGTGCTGAAAAAT+GGG | - | chr4_4:61029633-61029652 | None:intergenic | 35.0% |
!! | TCAATCCAAGTGCTGAAAAA+TGG | - | chr4_4:61029634-61029653 | None:intergenic | 35.0% |
GCATTTCTTCATCCTAATCA+TGG | + | chr4_4:61029694-61029713 | Msa0692470:intron | 35.0% | |
AACAAGCAGTAACCATGATT+AGG | - | chr4_4:61029709-61029728 | None:intergenic | 35.0% | |
! | CCATCTGTGATGAATGATTT+TGG | - | chr4_4:61029805-61029824 | None:intergenic | 35.0% |
CCAAAATCATTCATCACAGA+TGG | + | chr4_4:61029802-61029821 | Msa0692470:CDS | 35.0% | |
! | TGCTTTGGATTTCATGGTTT+CGG | + | chr4_4:61029826-61029845 | Msa0692470:CDS | 35.0% |
ACCTTTATTCCTACCTATGA+TGG | + | chr4_4:61029860-61029879 | Msa0692470:CDS | 35.0% | |
CCTTTATTCCTACCTATGAT+GGG | + | chr4_4:61029861-61029880 | Msa0692470:CDS | 35.0% | |
! | TATCTTATTAGCTCTCATGC+AGG | + | chr4_4:61030007-61030026 | Msa0692470:intron | 35.0% |
AAAAGTCCATCTTATTGGAC+CGG | + | chr4_4:61030043-61030062 | Msa0692470:CDS | 35.0% | |
TACAAACTCATTCCATGGAA+GGG | - | chr4_4:61030109-61030128 | Msa0692480:three_prime_UTR | 35.0% | |
ACAATGATTCGACGATAAGT+CGG | - | chr4_4:61030171-61030190 | Msa0692480:three_prime_UTR | 35.0% | |
TAGAAATAATCCTCCTCCTT+TGG | - | chr4_4:61030201-61030220 | Msa0692480:three_prime_UTR | 35.0% | |
!! | ACAAAGTGTGATGATTTGCT+AGG | + | chr4_4:61030252-61030271 | Msa0692470:CDS | 35.0% |
! | CTTACTTGAGTAGAGTTTTG+AGG | - | chr4_4:61030279-61030298 | Msa0692480:three_prime_UTR | 35.0% |
AGATTGCTCTTGCATACTTA+TGG | - | chr4_4:61030348-61030367 | Msa0692480:three_prime_UTR | 35.0% | |
ATGCAAGAGCAATCTGAAAA+TGG | + | chr4_4:61030353-61030372 | Msa0692470:three_prime_UTR | 35.0% | |
! | CATGATTTTGTAGGAAACCA+TGG | + | chr4_4:61030416-61030435 | Msa0692470:three_prime_UTR | 35.0% |
! | TGATTTTGTAGGAAACCATG+GGG | + | chr4_4:61030418-61030437 | Msa0692470:three_prime_UTR | 35.0% |
TTTGGTGGGGGAAAAAATAA+GGG | - | chr4_4:61030508-61030527 | Msa0692480:three_prime_UTR | 35.0% | |
! | ATTTGGTGGGGGAAAAAATA+AGG | - | chr4_4:61030509-61030528 | Msa0692480:three_prime_UTR | 35.0% |
! | AACTATACTGAATTTGGTGG+GGG | - | chr4_4:61030520-61030539 | Msa0692480:three_prime_UTR | 35.0% |
! | CAACTATACTGAATTTGGTG+GGG | - | chr4_4:61030521-61030540 | Msa0692480:three_prime_UTR | 35.0% |
GGATGAAAAAACTGAACACT+TGG | - | chr4_4:61030822-61030841 | Msa0692480:three_prime_UTR | 35.0% | |
! | ACTGTTGTTTGTATCTCTTG+AGG | - | chr4_4:61030843-61030862 | Msa0692480:three_prime_UTR | 35.0% |
AAGAGGCAAATCTAGATTCA+AGG | - | chr4_4:61031083-61031102 | Msa0692480:CDS | 35.0% | |
GAACAAAGCATACAAATTGC+AGG | - | chr4_4:61031118-61031137 | Msa0692480:intron | 35.0% | |
GTACTACGTAAAATGCAATG+AGG | + | chr4_4:61031190-61031209 | Msa0692470:intron | 35.0% | |
TTATCACACAACCATTGAAC+AGG | - | chr4_4:61031360-61031379 | Msa0692480:CDS | 35.0% | |
ATACTAGCTCCTCATTATCA+CGG | + | chr4_4:61031420-61031439 | Msa0692470:three_prime_UTR | 35.0% | |
! | ATCTGAGATTAGTAGCACTA+GGG | - | chr4_4:61031517-61031536 | Msa0692480:CDS | 35.0% |
! | TATCTGAGATTAGTAGCACT+AGG | - | chr4_4:61031518-61031537 | Msa0692480:CDS | 35.0% |
! | AGTGCTACTAATCTCAGATA+TGG | + | chr4_4:61031518-61031537 | Msa0692470:three_prime_UTR | 35.0% |
TATGCATATCGATCTGCATT+TGG | + | chr4_4:61031674-61031693 | Msa0692470:three_prime_UTR | 35.0% | |
AAACAAAAGCAATGCAGAGT+TGG | - | chr4_4:61031723-61031742 | Msa0692480:CDS | 35.0% | |
!!! | CAGTTGGTAACTTTTACTGT+AGG | - | chr4_4:61031765-61031784 | Msa0692480:intron | 35.0% |
GATCATGCTTATGAAGTCAA+AGG | - | chr4_4:61032176-61032195 | Msa0692480:CDS | 35.0% | |
GTAGATGAATTGAGAGATCC+AGG | - | chr4_4:61025814-61025833 | None:intergenic | 40.0% | |
GTGCATGGATTCAAAGGTTT+GGG | - | chr4_4:61025836-61025855 | None:intergenic | 40.0% | |
TGTGCATGGATTCAAAGGTT+TGG | - | chr4_4:61025837-61025856 | None:intergenic | 40.0% | |
ATTCTGTGGACACAATTTGG+TGG | + | chr4_4:61026126-61026145 | Msa0692470:five_prime_UTR | 40.0% | |
! | GAATTTGAAGCTGGTGATTG+AGG | - | chr4_4:61026178-61026197 | None:intergenic | 40.0% |
! | CCCAGAATTGAATTTGAAGC+TGG | - | chr4_4:61026187-61026206 | None:intergenic | 40.0% |
TGCAAAGTGACTCTATGGAA+AGG | - | chr4_4:61026285-61026304 | None:intergenic | 40.0% | |
CAATGTACTTCTTACGTACG+AGG | + | chr4_4:61026303-61026322 | Msa0692470:intron | 40.0% | |
! | TGGTTGTGAAAAGTGTGTGA+AGG | + | chr4_4:61026364-61026383 | Msa0692470:five_prime_UTR | 40.0% |
! | TGAAGGTTATGGTGATGAAG+TGG | + | chr4_4:61026381-61026400 | Msa0692470:five_prime_UTR | 40.0% |
TTTGTTCAACCATTGTGCTG+TGG | + | chr4_4:61026532-61026551 | Msa0692470:CDS | 40.0% | |
TTGTGACTGTGAGTGAACTA+TGG | + | chr4_4:61026571-61026590 | Msa0692470:CDS | 40.0% | |
! | CTAACTTGCAGGAAGTAGAA+TGG | - | chr4_4:61026688-61026707 | None:intergenic | 40.0% |
!!! | AGTGGTTTTGTGATGTGGTT+TGG | + | chr4_4:61026758-61026777 | Msa0692470:intron | 40.0% |
GGTTTGGAAATGTGTAGCTT+TGG | + | chr4_4:61026774-61026793 | Msa0692470:intron | 40.0% | |
GATCATGCTTAGCTGAATGT+TGG | + | chr4_4:61027065-61027084 | Msa0692470:intron | 40.0% | |
TCATGCTTAGCTGAATGTTG+GGG | + | chr4_4:61027067-61027086 | Msa0692470:intron | 40.0% | |
!! | ATAACAGCCAAGTACTGAGT+AGG | + | chr4_4:61027309-61027328 | Msa0692470:intron | 40.0% |
!! | TAACAGCCAAGTACTGAGTA+GGG | + | chr4_4:61027310-61027329 | Msa0692470:intron | 40.0% |
ATCTATCCCTACTCAGTACT+TGG | - | chr4_4:61027319-61027338 | None:intergenic | 40.0% | |
CTCATACAGGGTCATTGAAA+TGG | - | chr4_4:61027586-61027605 | None:intergenic | 40.0% | |
!! | TAAGTGCTGGAGAGATTGAT+GGG | - | chr4_4:61027626-61027645 | None:intergenic | 40.0% |
!! | TTAAGTGCTGGAGAGATTGA+TGG | - | chr4_4:61027627-61027646 | None:intergenic | 40.0% |
!! | TTTCTAAGAGTGTCCTGCAA+TGG | + | chr4_4:61027892-61027911 | Msa0692470:CDS | 40.0% |
!! | TTCTAAGAGTGTCCTGCAAT+GGG | + | chr4_4:61027893-61027912 | Msa0692470:CDS | 40.0% |
TTTGAATCAAATGCGTGCAG+CGG | + | chr4_4:61027918-61027937 | Msa0692470:CDS | 40.0% | |
GGCATTTCAGATTTGTGACA+TGG | + | chr4_4:61028015-61028034 | Msa0692470:intron | 40.0% | |
TACGTAGCTTAACCCAAAGT+TGG | + | chr4_4:61028625-61028644 | Msa0692470:intron | 40.0% | |
!! | TGCTTTTTGGCACCAACTTT+GGG | - | chr4_4:61028640-61028659 | None:intergenic | 40.0% |
TAAGGGAAGAGGGGAAATAT+AGG | - | chr4_4:61028696-61028715 | None:intergenic | 40.0% | |
ACCTTGTGTTTGGCAAAAAG+CGG | - | chr4_4:61028772-61028791 | None:intergenic | 40.0% | |
TTGGGAGACCATTATTTGCT+AGG | - | chr4_4:61028822-61028841 | None:intergenic | 40.0% | |
ACCCCTCAAATTGAGAATCT+GGG | + | chr4_4:61028892-61028911 | Msa0692470:CDS | 40.0% | |
TCAGATATGCATTCCCTTCA+TGG | + | chr4_4:61029288-61029307 | Msa0692470:intron | 40.0% | |
TTTCCTTCTCTCTCCATGAA+GGG | - | chr4_4:61029304-61029323 | None:intergenic | 40.0% | |
ATTTCCTTCTCTCTCCATGA+AGG | - | chr4_4:61029305-61029324 | None:intergenic | 40.0% | |
CAATGTAAATCTGTGTCTCC+CGG | - | chr4_4:61029412-61029431 | None:intergenic | 40.0% | |
ACACAGATTTACATTGCAGC+CGG | + | chr4_4:61029416-61029435 | Msa0692470:CDS | 40.0% | |
TTCACCACCATAAATCTCAC+CGG | - | chr4_4:61029438-61029457 | None:intergenic | 40.0% | |
AAGGGGAAGGGAGATATAAA+TGG | - | chr4_4:61029509-61029528 | None:intergenic | 40.0% | |
CACAAGCTAGAATCATTCAG+TGG | - | chr4_4:61029574-61029593 | None:intergenic | 40.0% | |
AGCACTTGGATTGAAAGTTG+TGG | + | chr4_4:61029640-61029659 | Msa0692470:intron | 40.0% | |
!! | GAAAGTTGTGGCTCTGAAAA+TGG | + | chr4_4:61029652-61029671 | Msa0692470:intron | 40.0% |
GAACTGCTGTAACTCATCAA+GGG | - | chr4_4:61029783-61029802 | None:intergenic | 40.0% | |
CCCATCATAGGTAGGAATAA+AGG | - | chr4_4:61029864-61029883 | None:intergenic | 40.0% | |
! | TTTTGCCATGTTCCCATCAT+AGG | - | chr4_4:61029876-61029895 | None:intergenic | 40.0% |
AACATGGCAAAACTTGTGGA+AGG | + | chr4_4:61029884-61029903 | Msa0692470:CDS | 40.0% | |
CGTGAGTAAATAGATACCTG+CGG | - | chr4_4:61029913-61029932 | None:intergenic | 40.0% | |
! | GCAATTGTACAAGCCTTTTC+CGG | - | chr4_4:61030065-61030084 | Msa0692480:three_prime_UTR | 40.0% |
ATCAAAATGGAACCCTTCCA+TGG | + | chr4_4:61030094-61030113 | Msa0692470:CDS | 40.0% | |
CTACAAACTCATTCCATGGA+AGG | - | chr4_4:61030110-61030129 | Msa0692480:three_prime_UTR | 40.0% | |
GCATCTACAAACTCATTCCA+TGG | - | chr4_4:61030114-61030133 | Msa0692480:three_prime_UTR | 40.0% | |
ACAGGTTCACGAAAAGAGAA+TGG | + | chr4_4:61030140-61030159 | Msa0692470:CDS | 40.0% | |
CAGGTTCACGAAAAGAGAAT+GGG | + | chr4_4:61030141-61030160 | Msa0692470:CDS | 40.0% | |
CATTGTAGACAAACCAAAGG+AGG | + | chr4_4:61030185-61030204 | Msa0692470:CDS | 40.0% | |
GCTCTTGCATACTTATGGTT+GGG | - | chr4_4:61030343-61030362 | Msa0692480:three_prime_UTR | 40.0% | |
TGCTCTTGCATACTTATGGT+TGG | - | chr4_4:61030344-61030363 | Msa0692480:three_prime_UTR | 40.0% | |
CATCTTTGCAAGCCTCTATA+TGG | - | chr4_4:61030471-61030490 | Msa0692480:three_prime_UTR | 40.0% | |
! | TTTTCCACTTTACAAGCTGC+AGG | + | chr4_4:61030682-61030701 | Msa0692470:three_prime_UTR | 40.0% |
TGGGTTGTAATAATTGTGGC+CGG | + | chr4_4:61030712-61030731 | Msa0692470:three_prime_UTR | 40.0% | |
! | CCATGATCAAGTTTTTGACC+CGG | - | chr4_4:61030734-61030753 | Msa0692480:three_prime_UTR | 40.0% |
TTGATCATGGTCCCCTTTAA+AGG | + | chr4_4:61030744-61030763 | Msa0692470:three_prime_UTR | 40.0% | |
ATCGCAAATGTAGCCTTCTA+CGG | - | chr4_4:61030796-61030815 | Msa0692480:three_prime_UTR | 40.0% | |
! | AGTATTTTGCAAGGTCTCCA+AGG | + | chr4_4:61030902-61030921 | Msa0692470:three_prime_UTR | 40.0% |
TTATCAAGAAAGGAGGCTCA+AGG | - | chr4_4:61030959-61030978 | Msa0692480:CDS | 40.0% | |
AGAATTGGAACTAGACCAGT+TGG | - | chr4_4:61030986-61031005 | Msa0692480:CDS | 40.0% | |
GATCTTCGAGCAGAAAGAAT+TGG | - | chr4_4:61031001-61031020 | Msa0692480:CDS | 40.0% | |
AAGGGGAAAAAATGATCCTG+CGG | - | chr4_4:61031035-61031054 | Msa0692480:CDS | 40.0% | |
TAGCAGTCGGAATAAGAGAA+GGG | - | chr4_4:61031053-61031072 | Msa0692480:CDS | 40.0% | |
ATAGCAGTCGGAATAAGAGA+AGG | - | chr4_4:61031054-61031073 | Msa0692480:CDS | 40.0% | |
! | TCTGAGATTAGTAGCACTAG+GGG | - | chr4_4:61031516-61031535 | Msa0692480:CDS | 40.0% |
TGCTGTCTGAGAAAAACCAT+TGG | + | chr4_4:61031586-61031605 | Msa0692470:three_prime_UTR | 40.0% | |
GTCAAAAAAAGGGTCTGACT+CGG | + | chr4_4:61031631-61031650 | Msa0692470:three_prime_UTR | 40.0% | |
TATGCATACACCTTGACACT+GGG | - | chr4_4:61031662-61031681 | Msa0692480:CDS | 40.0% | |
ATATGCATACACCTTGACAC+TGG | - | chr4_4:61031663-61031682 | Msa0692480:CDS | 40.0% | |
CACATTCATAACTGTGCAGT+TGG | - | chr4_4:61031781-61031800 | Msa0692480:intron | 40.0% | |
! | GCAATCCAAGCTGTATTTTG+AGG | - | chr4_4:61031854-61031873 | Msa0692480:intron | 40.0% |
AAAGTTCTGCTGCAACTTTC+TGG | + | chr4_4:61031874-61031893 | Msa0692470:three_prime_UTR | 40.0% | |
!! | CTTTCTGGCTCTGATACATT+TGG | + | chr4_4:61031889-61031908 | Msa0692470:three_prime_UTR | 40.0% |
TTTCCTTGATATGGAAGAGC+TGG | + | chr4_4:61031932-61031951 | Msa0692470:three_prime_UTR | 40.0% | |
ATGATCATCTGTAGTCACTC+TGG | + | chr4_4:61032190-61032209 | Msa0692470:three_prime_UTR | 40.0% | |
AGGTGAGGATCCAATGAGAA+TGG | - | chr4_4:61026026-61026045 | None:intergenic | 45.0% | |
AGGAATTGAGGAACAAGGTG+AGG | - | chr4_4:61026041-61026060 | None:intergenic | 45.0% | |
AAGCTGCTCCTTTGATTCCA+AGG | + | chr4_4:61026481-61026500 | Msa0692470:CDS | 45.0% | |
AAACGGCTCCTTGGAATCAA+AGG | - | chr4_4:61026492-61026511 | None:intergenic | 45.0% | |
CAAACATGTCCACAGCACAA+TGG | - | chr4_4:61026544-61026563 | None:intergenic | 45.0% | |
CATTGTGCTGTGGACATGTT+TGG | + | chr4_4:61026542-61026561 | Msa0692470:CDS | 45.0% | |
!!! | GCTTGAGTGGTTTTGTGATG+TGG | + | chr4_4:61026753-61026772 | Msa0692470:intron | 45.0% |
GTACAGTGGAGAATCTGGAT+GGG | - | chr4_4:61027482-61027501 | None:intergenic | 45.0% | |
TGTACAGTGGAGAATCTGGA+TGG | - | chr4_4:61027483-61027502 | None:intergenic | 45.0% | |
GAGTTGTACAGTGGAGAATC+TGG | - | chr4_4:61027487-61027506 | None:intergenic | 45.0% | |
CAGCTAAAGGAGTTGTACAG+TGG | - | chr4_4:61027496-61027515 | None:intergenic | 45.0% | |
!! | AAGTGCTGGAGAGATTGATG+GGG | - | chr4_4:61027625-61027644 | None:intergenic | 45.0% |
! | ACGTAGATGGGTTTGGTAGA+CGG | + | chr4_4:61027768-61027787 | Msa0692470:intron | 45.0% |
CTGCAAGATTTCAGCTGACA+AGG | - | chr4_4:61027852-61027871 | None:intergenic | 45.0% | |
CTTGTCAGCTGAAATCTTGC+AGG | + | chr4_4:61027850-61027869 | Msa0692470:intron | 45.0% | |
!! | TCTAAGAGTGTCCTGCAATG+GGG | + | chr4_4:61027894-61027913 | Msa0692470:CDS | 45.0% |
TTGATTCAAACCCCCATTGC+AGG | - | chr4_4:61027908-61027927 | None:intergenic | 45.0% | |
GTGACATGGTGACAATTGCT+CGG | + | chr4_4:61028029-61028048 | Msa0692470:CDS | 45.0% | |
! | TCGGCTTTTGAACCTCACAT+TGG | + | chr4_4:61028048-61028067 | Msa0692470:CDS | 45.0% |
! | GAACCTCACATTGGTTGTTC+CGG | + | chr4_4:61028057-61028076 | Msa0692470:CDS | 45.0% |
TCATTTGACCAGCTAACAGG+AGG | - | chr4_4:61028325-61028344 | None:intergenic | 45.0% | |
!! | GTGCTTTTTGGCACCAACTT+TGG | - | chr4_4:61028641-61028660 | None:intergenic | 45.0% |
!!! | ACCGCTTTTTGCCAAACACA+AGG | + | chr4_4:61028768-61028787 | Msa0692470:CDS | 45.0% |
! | GCTTTTTGCCAAACACAAGG+TGG | + | chr4_4:61028771-61028790 | Msa0692470:CDS | 45.0% |
GATGCACGCCTAGCAAATAA+TGG | + | chr4_4:61028811-61028830 | Msa0692470:CDS | 45.0% | |
! | TAGGTGCCGTGTTAATTACC+AGG | + | chr4_4:61028858-61028877 | Msa0692470:CDS | 45.0% |
CACCCCTCAAATTGAGAATC+TGG | + | chr4_4:61028891-61028910 | Msa0692470:CDS | 45.0% | |
CCCCAGATTCTCAATTTGAG+GGG | - | chr4_4:61028896-61028915 | None:intergenic | 45.0% | |
CCCCTCAAATTGAGAATCTG+GGG | + | chr4_4:61028893-61028912 | Msa0692470:CDS | 45.0% | |
GCCCCAGATTCTCAATTTGA+GGG | - | chr4_4:61028897-61028916 | None:intergenic | 45.0% | |
TGCCCCAGATTCTCAATTTG+AGG | - | chr4_4:61028898-61028917 | None:intergenic | 45.0% | |
TGATTCAGATACTTCGCGAG+AGG | + | chr4_4:61028923-61028942 | Msa0692470:CDS | 45.0% | |
GATTCAGATACTTCGCGAGA+GGG | + | chr4_4:61028924-61028943 | Msa0692470:CDS | 45.0% | |
ATTCAGATACTTCGCGAGAG+GGG | + | chr4_4:61028925-61028944 | Msa0692470:CDS | 45.0% | |
CTCAGATGCAATGCCACAAA+AGG | - | chr4_4:61028952-61028971 | None:intergenic | 45.0% | |
GAGATATGAGATGGACATGC+TGG | + | chr4_4:61028969-61028988 | Msa0692470:CDS | 45.0% | |
! | GCTTTCTCAGGTTGTACTCT+TGG | + | chr4_4:61028991-61029010 | Msa0692470:CDS | 45.0% |
TTGCACTAATGAAGAAGCCG+AGG | + | chr4_4:61029014-61029033 | Msa0692470:CDS | 45.0% | |
ATTCCCTTCATGGAGAGAGA+AGG | + | chr4_4:61029298-61029317 | Msa0692470:CDS | 45.0% | |
TCTGAAGAAAGGAGATCCCA+GGG | + | chr4_4:61029329-61029348 | Msa0692470:CDS | 45.0% | |
TGTCAAAGGACATAGACCCT+GGG | - | chr4_4:61029348-61029367 | None:intergenic | 45.0% | |
ACCTAAGGCTTGCATAACCA+AGG | - | chr4_4:61029384-61029403 | None:intergenic | 45.0% | |
!! | TGCAAGCCTTAGGTTTTGAC+CGG | + | chr4_4:61029390-61029409 | Msa0692470:CDS | 45.0% |
ATTGCAGCCGGTGAGATTTA+TGG | + | chr4_4:61029428-61029447 | Msa0692470:CDS | 45.0% | |
!! | GTTGTGGCTCTGAAAATGGT+TGG | + | chr4_4:61029656-61029675 | Msa0692470:intron | 45.0% |
GGAACTGCTGTAACTCATCA+AGG | - | chr4_4:61029784-61029803 | None:intergenic | 45.0% | |
TTCATCACAGATGGCTGCTT+TGG | + | chr4_4:61029811-61029830 | Msa0692470:CDS | 45.0% | |
! | GATGGCTGCTTTGGATTTCA+TGG | + | chr4_4:61029820-61029839 | Msa0692470:CDS | 45.0% |
GATTTCATGGTTTCGGTAGC+CGG | + | chr4_4:61029833-61029852 | Msa0692470:CDS | 45.0% | |
!! | GGTAGGAATAAAGGTGTCAC+CGG | - | chr4_4:61029855-61029874 | None:intergenic | 45.0% |
! | TCCTACCTATGATGGGAACA+TGG | + | chr4_4:61029868-61029887 | Msa0692470:CDS | 45.0% |
TGGGAACATGGCAAAACTTG+TGG | + | chr4_4:61029880-61029899 | Msa0692470:CDS | 45.0% | |
GAGTAAATAGATACCTGCGG+TGG | - | chr4_4:61029910-61029929 | None:intergenic | 45.0% | |
TAGCTCTCATGCAGGTATTC+CGG | + | chr4_4:61030015-61030034 | Msa0692470:intron | 45.0% | |
! | CCTTTTCCGGTCCAATAAGA+TGG | - | chr4_4:61030052-61030071 | Msa0692480:three_prime_UTR | 45.0% |
CCATCTTATTGGACCGGAAA+AGG | + | chr4_4:61030049-61030068 | Msa0692470:CDS | 45.0% | |
TGTAGACAAACCAAAGGAGG+AGG | + | chr4_4:61030188-61030207 | Msa0692470:CDS | 45.0% | |
CACACTTTGTTCCCTCACAA+AGG | - | chr4_4:61030242-61030261 | Msa0692480:three_prime_UTR | 45.0% | |
! | CTCTAAGAACTTATGCCCGA+GGG | - | chr4_4:61030385-61030404 | Msa0692480:three_prime_UTR | 45.0% |
! | TCTCTAAGAACTTATGCCCG+AGG | - | chr4_4:61030386-61030405 | Msa0692480:three_prime_UTR | 45.0% |
TACAAGCTGCAGGCATGTAA+TGG | + | chr4_4:61030692-61030711 | Msa0692470:three_prime_UTR | 45.0% | |
ACAAGCTGCAGGCATGTAAT+GGG | + | chr4_4:61030693-61030712 | Msa0692470:three_prime_UTR | 45.0% | |
GGGTTGTAATAATTGTGGCC+GGG | + | chr4_4:61030713-61030732 | Msa0692470:three_prime_UTR | 45.0% | |
CCGGGTCAAAAACTTGATCA+TGG | + | chr4_4:61030731-61030750 | Msa0692470:three_prime_UTR | 45.0% | |
CTCAAGGATCTTGGACTTTG+CGG | - | chr4_4:61030943-61030962 | Msa0692480:CDS | 45.0% | |
AGATCTCATCAATTTGCCGC+AGG | + | chr4_4:61031016-61031035 | Msa0692470:three_prime_UTR | 45.0% | |
AGCAGTCGGAATAAGAGAAG+GGG | - | chr4_4:61031052-61031071 | Msa0692480:CDS | 45.0% | |
TCAAGGCTTGCAATAGCAGT+CGG | - | chr4_4:61031066-61031085 | Msa0692480:CDS | 45.0% | |
CATTCAGGGTTCCAACATGA+TGG | - | chr4_4:61031325-61031344 | Msa0692480:intron | 45.0% | |
TGGTTGTGTGATAACCAGCA+AGG | + | chr4_4:61031366-61031385 | Msa0692470:three_prime_UTR | 45.0% | |
GGTTGTGTGATAACCAGCAA+GGG | + | chr4_4:61031367-61031386 | Msa0692470:three_prime_UTR | 45.0% | |
TGAGGAGCTAGTATGCAAAG+CGG | - | chr4_4:61031414-61031433 | Msa0692480:CDS | 45.0% | |
TCCTCATTATCACGGCTCAT+GGG | + | chr4_4:61031428-61031447 | Msa0692470:three_prime_UTR | 45.0% | |
ACTGTTCAGAGACTCCATCT+GGG | - | chr4_4:61031468-61031487 | Msa0692480:CDS | 45.0% | |
!! | GGGTACCGATGCTTTCTTAT+TGG | - | chr4_4:61031495-61031514 | Msa0692480:CDS | 45.0% |
CTGAGATTAGTAGCACTAGG+GGG | - | chr4_4:61031515-61031534 | Msa0692480:CDS | 45.0% | |
!! | AGATATGGAAGCATCCCTTC+TGG | + | chr4_4:61031533-61031552 | Msa0692470:three_prime_UTR | 45.0% |
ATGCATACACCTTGACACTG+GGG | - | chr4_4:61031661-61031680 | Msa0692480:CDS | 45.0% | |
TTGCGCCTCAAAATACAGCT+TGG | + | chr4_4:61031846-61031865 | Msa0692470:three_prime_UTR | 45.0% | |
TAGCCAGCTCTTCCATATCA+AGG | - | chr4_4:61031938-61031957 | Msa0692480:intron | 45.0% | |
ATACATCCATGTCCATCCGA+GGG | - | chr4_4:61032010-61032029 | Msa0692480:intron | 45.0% | |
AATACATCCATGTCCATCCG+AGG | - | chr4_4:61032011-61032030 | Msa0692480:intron | 45.0% | |
TTCTCCTGCCTTGACAGAAA+GGG | + | chr4_4:61032103-61032122 | Msa0692470:three_prime_UTR | 45.0% | |
GGGATTACCTATTTGCCCTA+AGG | - | chr4_4:61032133-61032152 | Msa0692480:CDS | 45.0% | |
!!! | ACCAGCTGGTCTTTTCTCTT+GGG | - | chr4_4:61032153-61032172 | Msa0692480:CDS | 45.0% |
TATGAAGTCAAAGGACCAGC+TGG | - | chr4_4:61032167-61032186 | Msa0692480:CDS | 45.0% | |
CAAACACGAAAACGGCTCCT+TGG | - | chr4_4:61026501-61026520 | None:intergenic | 50.0% | |
!! | CAAGGAGCCGTTTTCGTGTT+TGG | + | chr4_4:61026499-61026518 | Msa0692470:CDS | 50.0% |
CTTGCAGGAAGTAGAATGGG+AGG | - | chr4_4:61026684-61026703 | None:intergenic | 50.0% | |
! | CGTAGATGGGTTTGGTAGAC+GGG | + | chr4_4:61027769-61027788 | Msa0692470:intron | 50.0% |
! | GTAGATGGGTTTGGTAGACG+GGG | + | chr4_4:61027770-61027789 | Msa0692470:intron | 50.0% |
!! | CTAAGAGTGTCCTGCAATGG+GGG | + | chr4_4:61027895-61027914 | Msa0692470:CDS | 50.0% |
GTTCCGGAACAACCAATGTG+AGG | - | chr4_4:61028063-61028082 | None:intergenic | 50.0% | |
! | AATCCTTTTGGGCAGACCGT+AGG | + | chr4_4:61028092-61028111 | Msa0692470:CDS | 50.0% |
ATACCTACGGTCTGCCCAAA+AGG | - | chr4_4:61028098-61028117 | None:intergenic | 50.0% | |
TTATTCTGGCAGTGGCTTCG+AGG | + | chr4_4:61028189-61028208 | Msa0692470:intron | 50.0% | |
GAAAAGTGGATACTCGACCC+TGG | + | chr4_4:61028294-61028313 | Msa0692470:CDS | 50.0% | |
GAAGTGCACCACCTTGTGTT+TGG | - | chr4_4:61028782-61028801 | None:intergenic | 50.0% | |
GAGGGGTGAATTTAAGTGCC+TGG | - | chr4_4:61028879-61028898 | None:intergenic | 50.0% | |
!! | ATGGACATGCTGGCTTTCTC+AGG | + | chr4_4:61028979-61028998 | Msa0692470:CDS | 50.0% |
AAGAAGCCGAGGATCTCAAG+CGG | + | chr4_4:61029025-61029044 | Msa0692470:CDS | 50.0% | |
GTCTGAAGAAAGGAGATCCC+AGG | + | chr4_4:61029328-61029347 | Msa0692470:CDS | 50.0% | |
GTGTCAAAGGACATAGACCC+TGG | - | chr4_4:61029349-61029368 | None:intergenic | 50.0% | |
GGGTCTATGTCCTTTGACAC+CGG | + | chr4_4:61029349-61029368 | Msa0692470:CDS | 50.0% | |
TCTATGTCCTTTGACACCGG+AGG | + | chr4_4:61029352-61029371 | Msa0692470:CDS | 50.0% | |
ATAACCAAGGCAGTCTCCTC+CGG | - | chr4_4:61029371-61029390 | None:intergenic | 50.0% | |
GCCTTGGTTATGCAAGCCTT+AGG | + | chr4_4:61029380-61029399 | Msa0692470:CDS | 50.0% | |
!! | GCAAGCCTTAGGTTTTGACC+GGG | + | chr4_4:61029391-61029410 | Msa0692470:CDS | 50.0% |
TGTCTCCCGGTCAAAACCTA+AGG | - | chr4_4:61029399-61029418 | None:intergenic | 50.0% | |
!! | CCAAGTGCTGAAAAATGGGG+AGG | - | chr4_4:61029629-61029648 | None:intergenic | 50.0% |
!! | CCTCCCCATTTTTCAGCACT+TGG | + | chr4_4:61029626-61029645 | Msa0692470:intron | 50.0% |
GCCATGTTCCCATCATAGGT+AGG | - | chr4_4:61029872-61029891 | None:intergenic | 50.0% | |
GTTTGTAGATGCTGTGCGAC+AGG | + | chr4_4:61030122-61030141 | Msa0692470:CDS | 50.0% | |
!! | ACAAAGGCACTCATGAGGGT+TGG | - | chr4_4:61030226-61030245 | Msa0692480:three_prime_UTR | 50.0% |
!! | CCTCACAAAGGCACTCATGA+GGG | - | chr4_4:61030230-61030249 | Msa0692480:three_prime_UTR | 50.0% |
CCTCATGAGTGCCTTTGTGA+GGG | + | chr4_4:61030228-61030247 | Msa0692470:CDS | 50.0% | |
CTGAAAATGGCTCCTTCCCT+CGG | + | chr4_4:61030366-61030385 | Msa0692470:three_prime_UTR | 50.0% | |
TGAAAATGGCTCCTTCCCTC+GGG | + | chr4_4:61030367-61030386 | Msa0692470:three_prime_UTR | 50.0% | |
AAGAACTTATGCCCGAGGGA+AGG | - | chr4_4:61030381-61030400 | Msa0692480:three_prime_UTR | 50.0% | |
CATGCCTGCAGCTTGTAAAG+TGG | - | chr4_4:61030689-61030708 | Msa0692480:three_prime_UTR | 50.0% | |
TCACATGCGTTCACCGTAGA+AGG | + | chr4_4:61030780-61030799 | Msa0692470:three_prime_UTR | 50.0% | |
! | GGTGAAAGTGGTGATGTCCT+TGG | - | chr4_4:61030922-61030941 | Msa0692480:CDS | 50.0% |
CTTGGACTTTGCGGTGAAAG+TGG | - | chr4_4:61030934-61030953 | Msa0692480:CDS | 50.0% | |
GAAAGGAGGCTCAAGGATCT+TGG | - | chr4_4:61030952-61030971 | Msa0692480:CDS | 50.0% | |
TGTGTGATAACCAGCAAGGG+CGG | + | chr4_4:61031370-61031389 | Msa0692470:three_prime_UTR | 50.0% | |
CTCCTCATTATCACGGCTCA+TGG | + | chr4_4:61031427-61031446 | Msa0692470:three_prime_UTR | 50.0% | |
CTGTTCAGAGACTCCATCTG+GGG | - | chr4_4:61031467-61031486 | Msa0692480:CDS | 50.0% | |
CACTGTTCAGAGACTCCATC+TGG | - | chr4_4:61031469-61031488 | Msa0692480:CDS | 50.0% | |
! | GAAGCATCCCTTCTGGAAGA+GGG | + | chr4_4:61031540-61031559 | Msa0692470:three_prime_UTR | 50.0% |
ATAACCGCCCTCTTCCAGAA+GGG | - | chr4_4:61031550-61031569 | Msa0692480:CDS | 50.0% | |
TATAACCGCCCTCTTCCAGA+AGG | - | chr4_4:61031551-61031570 | Msa0692480:CDS | 50.0% | |
GTAGACGTTGCTGAGACCAA+TGG | - | chr4_4:61031605-61031624 | Msa0692480:CDS | 50.0% | |
! | AAGCAATGCAGAGTTGGCTC+TGG | - | chr4_4:61031717-61031736 | Msa0692480:CDS | 50.0% |
TACATCCATGTCCATCCGAG+GGG | - | chr4_4:61032009-61032028 | Msa0692480:intron | 50.0% | |
TTCTGTCAAGGCAGGAGAAC+AGG | - | chr4_4:61032102-61032121 | Msa0692480:CDS | 50.0% | |
GTTCTCCTGCCTTGACAGAA+AGG | + | chr4_4:61032102-61032121 | Msa0692470:three_prime_UTR | 50.0% | |
TCTCCTGCCTTGACAGAAAG+GGG | + | chr4_4:61032104-61032123 | Msa0692470:three_prime_UTR | 50.0% | |
TCCCAAGAGAAAAGACCAGC+TGG | + | chr4_4:61032149-61032168 | Msa0692470:three_prime_UTR | 50.0% | |
!!! | GACCAGCTGGTCTTTTCTCT+TGG | - | chr4_4:61032154-61032173 | Msa0692480:CDS | 50.0% |
GAAGCTGGTGATTGAGGGTG+AGG | - | chr4_4:61026172-61026191 | None:intergenic | 55.0% | |
ACAACTCAACGGCCTCCTCA+AGG | + | chr4_4:61026636-61026655 | Msa0692470:CDS | 55.0% | |
!! | GCTAACAGGAGGCATCTCCA+GGG | - | chr4_4:61028314-61028333 | None:intergenic | 55.0% |
!! | AGCTAACAGGAGGCATCTCC+AGG | - | chr4_4:61028315-61028334 | None:intergenic | 55.0% |
TGGAGATGCCTCCTGTTAGC+TGG | + | chr4_4:61028314-61028333 | Msa0692470:CDS | 55.0% | |
CCTCATCCGCTTGAGATCCT+CGG | - | chr4_4:61029034-61029053 | None:intergenic | 55.0% | |
GCAGCCGGTGAGATTTATGG+TGG | + | chr4_4:61029431-61029450 | Msa0692470:CDS | 55.0% | |
CCCTCATGAGTGCCTTTGTG+AGG | + | chr4_4:61030227-61030246 | Msa0692470:CDS | 55.0% | |
!! | CCCTCACAAAGGCACTCATG+AGG | - | chr4_4:61030231-61030250 | Msa0692480:three_prime_UTR | 55.0% |
GCAGGATCGCAAGCTGAAAG+AGG | - | chr4_4:61031100-61031119 | Msa0692480:intron | 55.0% | |
! | GCCCATGAGCCGTGATAATG+AGG | - | chr4_4:61031432-61031451 | Msa0692480:CDS | 55.0% |
CACCTCAAGATGACCCCAGA+TGG | + | chr4_4:61031451-61031470 | Msa0692470:three_prime_UTR | 55.0% | |
! | CTCCATCTGGGGTCATCTTG+AGG | - | chr4_4:61031456-61031475 | Msa0692480:CDS | 55.0% |
!! | GGAAGCATCCCTTCTGGAAG+AGG | + | chr4_4:61031539-61031558 | Msa0692470:three_prime_UTR | 55.0% |
CTCGGATATCCCCAGTGTCA+AGG | + | chr4_4:61031649-61031668 | Msa0692470:three_prime_UTR | 55.0% | |
!! | GCAGAGTTGGCTCTGGACTA+TGG | - | chr4_4:61031710-61031729 | Msa0692480:CDS | 55.0% |
TCCTACCGTCGAAAACCCCT+CGG | + | chr4_4:61031991-61032010 | Msa0692470:intron | 55.0% | |
! | TCCATCCGAGGGGTTTTCGA+CGG | - | chr4_4:61031999-61032018 | Msa0692480:intron | 55.0% |
GAAAACCCCTCGGATGGACA+TGG | + | chr4_4:61032001-61032020 | Msa0692470:intron | 55.0% | |
CTCCTGCCTTGACAGAAAGG+GGG | + | chr4_4:61032105-61032124 | Msa0692470:three_prime_UTR | 55.0% | |
AAGGAGCCCCCTTTCTGTCA+AGG | - | chr4_4:61032114-61032133 | Msa0692480:CDS | 55.0% | |
TGACAGAAAGGGGGCTCCTT+AGG | + | chr4_4:61032114-61032133 | Msa0692470:three_prime_UTR | 55.0% | |
GACAGAAAGGGGGCTCCTTA+GGG | + | chr4_4:61032115-61032134 | Msa0692470:three_prime_UTR | 55.0% | |
CTGTAGTCACTCTGGCACTG+TGG | + | chr4_4:61032198-61032217 | Msa0692470:three_prime_UTR | 55.0% | |
! | TCGCGAGAGGGGACCTTTTG+TGG | + | chr4_4:61028936-61028955 | Msa0692470:CDS | 60.0% |
CCGAGGATCTCAAGCGGATG+AGG | + | chr4_4:61029031-61029050 | Msa0692470:CDS | 60.0% | |
! | GCAGTCTCCTCCGGTGTCAA+AGG | - | chr4_4:61029362-61029381 | None:intergenic | 60.0% |
AACTTGTGGAAGGCCACCGC+AGG | + | chr4_4:61029894-61029913 | Msa0692470:CDS | 60.0% | |
! | ACCAGCAAGGGCGGATTTGC+AGG | + | chr4_4:61031379-61031398 | Msa0692470:three_prime_UTR | 60.0% |
! | GCATCCCTTCTGGAAGAGGG+CGG | + | chr4_4:61031543-61031562 | Msa0692470:three_prime_UTR | 60.0% |
! | TCCGAGGGGTTTTCGACGGT+AGG | - | chr4_4:61031995-61032014 | Msa0692480:intron | 60.0% |
ACCGTCGAAAACCCCTCGGA+TGG | + | chr4_4:61031995-61032014 | Msa0692470:intron | 60.0% | |
AGCCCCCTTTCTGTCAAGGC+AGG | - | chr4_4:61032110-61032129 | Msa0692480:CDS | 60.0% | |
GGGGGCTCCTTAGGGCAAAT+AGG | + | chr4_4:61032123-61032142 | Msa0692470:three_prime_UTR | 60.0% | |
GACACCGGAGGAGACTGCCT+TGG | + | chr4_4:61029364-61029383 | Msa0692470:CDS | 65.0% | |
GCCTGCAAATCCGCCCTTGC+TGG | - | chr4_4:61031383-61031402 | Msa0692480:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 61025626 | 61032226 | 61025626 | ID=Msa0692470;Name=Msa0692470 |
chr4_4 | mRNA | 61025626 | 61032226 | 61025626 | ID=Msa0692470-mRNA-1;Parent=Msa0692470;Name=Msa0692470-mRNA-1;_AED=0.11;_eAED=0.11;_QI=719|1|1|1|0.7|0.54|11|1553|507 |
chr4_4 | exon | 61025626 | 61026268 | 61025626 | ID=Msa0692470-mRNA-1:exon:16778;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61026350 | 61026702 | 61026350 | ID=Msa0692470-mRNA-1:exon:16779;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61027872 | 61027939 | 61027872 | ID=Msa0692470-mRNA-1:exon:16780;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61028025 | 61028113 | 61028025 | ID=Msa0692470-mRNA-1:exon:16781;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61028201 | 61028363 | 61028201 | ID=Msa0692470-mRNA-1:exon:16782;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61028763 | 61029052 | 61028763 | ID=Msa0692470-mRNA-1:exon:16783;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61029292 | 61029496 | 61029292 | ID=Msa0692470-mRNA-1:exon:16784;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61029758 | 61029915 | 61029758 | ID=Msa0692470-mRNA-1:exon:16785;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61030029 | 61031118 | 61030029 | ID=Msa0692470-mRNA-1:exon:16786;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61031361 | 61031970 | 61031361 | ID=Msa0692470-mRNA-1:exon:16787;Parent=Msa0692470-mRNA-1 |
chr4_4 | exon | 61032100 | 61032226 | 61032100 | ID=Msa0692470-mRNA-1:exon:16788;Parent=Msa0692470-mRNA-1 |
chr4_4 | five_prime_UTR | 61025626 | 61026268 | 61025626 | ID=Msa0692470-mRNA-1:five_prime_utr;Parent=Msa0692470-mRNA-1 |
chr4_4 | five_prime_UTR | 61026350 | 61026425 | 61026350 | ID=Msa0692470-mRNA-1:five_prime_utr;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61026426 | 61026702 | 61026426 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61027872 | 61027939 | 61027872 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61028025 | 61028113 | 61028025 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61028201 | 61028363 | 61028201 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61028763 | 61029052 | 61028763 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61029292 | 61029496 | 61029292 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61029758 | 61029915 | 61029758 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | CDS | 61030029 | 61030302 | 61030029 | ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1 |
chr4_4 | three_prime_UTR | 61030303 | 61031118 | 61030303 | ID=Msa0692470-mRNA-1:three_prime_utr;Parent=Msa0692470-mRNA-1 |
chr4_4 | three_prime_UTR | 61031361 | 61031970 | 61031361 | ID=Msa0692470-mRNA-1:three_prime_utr;Parent=Msa0692470-mRNA-1 |
chr4_4 | three_prime_UTR | 61032100 | 61032226 | 61032100 | ID=Msa0692470-mRNA-1:three_prime_utr;Parent=Msa0692470-mRNA-1 |
Gene Sequence |
Protein sequence |