AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0692470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692470 MtrunA17_Chr4g0042711 98.225 507 9 0 1 507 1 507 0.0 1044
Msa0692470 MtrunA17_Chr5g0417871 79.835 486 91 3 28 506 9 494 0.0 820
Msa0692470 MtrunA17_Chr6g0455571 59.006 483 196 2 8 488 25 507 0.0 605
Msa0692470 MtrunA17_Chr4g0061781 61.588 466 173 2 29 488 43 508 0.0 603
Msa0692470 MtrunA17_Chr2g0307971 57.809 493 202 3 8 499 30 517 0.0 597
Msa0692470 MtrunA17_Chr5g0426591 48.675 415 201 4 87 489 97 511 1.83e-140 414
Msa0692470 MtrunA17_Chr4g0070551 48.485 396 197 5 97 490 228 618 6.68e-136 406
Msa0692470 MtrunA17_Chr4g0008451 47.932 411 205 6 97 505 232 635 1.46e-134 404
Msa0692470 MtrunA17_Chr3g0132371 47.952 415 201 5 87 489 127 538 1.50e-131 392
Msa0692470 MtrunA17_Chr5g0436321 46.599 397 205 5 96 490 160 551 1.04e-129 389
Msa0692470 MtrunA17_Chr3g0129981 45.735 422 200 8 87 489 100 511 1.02e-124 374
Msa0692470 MtrunA17_Chr3g0143821 43.358 399 207 9 98 492 112 495 6.24e-100 312
Msa0692470 MtrunA17_Chr5g0399311 42.143 420 218 10 92 504 119 520 2.09e-99 309
Msa0692470 MtrunA17_Chr5g0448581 40.611 458 238 11 54 505 90 519 2.84e-98 308
Msa0692470 MtrunA17_Chr4g0056061 40.876 411 220 8 93 497 104 497 3.17e-98 306
Msa0692470 MtrunA17_Chr1g0204121 39.716 423 223 11 83 492 74 477 4.32e-93 292
Msa0692470 MtrunA17_Chr5g0412251 38.051 431 218 9 97 491 86 503 1.18e-90 286
Msa0692470 MtrunA17_Chr3g0123521 39.487 390 216 7 90 464 144 528 2.44e-89 284
Msa0692470 MtrunA17_Chr3g0132951 36.613 437 228 9 91 491 94 517 5.11e-88 279
Msa0692470 MtrunA17_Chr1g0204141 38.005 421 236 10 83 492 74 480 2.49e-84 270
Msa0692470 MtrunA17_Chr4g0043911 35.096 416 243 10 97 496 150 554 5.42e-82 265
Msa0692470 MtrunA17_Chr5g0424241 36.650 412 231 10 98 489 158 559 6.95e-79 258
Msa0692470 MtrunA17_Chr4g0075311 37.642 441 220 11 94 489 161 591 1.03e-78 257
Msa0692470 MtrunA17_Chr2g0284071 35.892 443 231 10 91 490 209 641 4.21e-78 257
Msa0692470 MtrunA17_Chr1g0160781 34.223 412 244 9 97 492 149 549 1.10e-76 251
Msa0692470 MtrunA17_Chr3g0077321 35.507 414 232 11 97 490 147 545 1.10e-74 246
Msa0692470 MtrunA17_Chr3g0087291 36.432 398 234 9 100 492 176 559 1.14e-71 238
Msa0692470 MtrunA17_Chr4g0010511 36.409 401 236 8 100 495 236 622 5.18e-71 238
Msa0692470 MtrunA17_Chr7g0240241 77.419 124 24 1 256 375 1 124 9.70e-61 195
Msa0692470 MtrunA17_Chr4g0003561 33.957 374 221 9 90 457 68 421 9.82e-59 200
Msa0692470 MtrunA17_Chr3g0127811 32.997 297 171 8 97 379 63 345 6.08e-42 156
Msa0692470 MtrunA17_Chr1g0146501 32.686 309 180 8 94 379 82 385 9.94e-42 158
Msa0692470 MtrunA17_Chr7g0220381 31.148 305 185 7 85 370 86 384 3.22e-39 151
Msa0692470 MtrunA17_Chr4g0002361 26.225 347 196 12 97 427 86 388 9.56e-24 103
Msa0692470 MtrunA17_Chr1g0172911 58.000 50 21 0 209 258 80 129 2.40e-12 64.3
Msa0692470 MtrunA17_Chr1g0172911 47.761 67 11 1 95 137 19 85 1.37e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692470 AT1G14020.1 71.881 505 136 2 1 505 1 499 0.0 761
Msa0692470 AT2G03280.1 69.528 466 130 4 24 488 26 480 0.0 687
Msa0692470 AT2G03280.2 65.720 493 130 5 24 488 26 507 0.0 673
Msa0692470 AT5G15740.1 58.030 467 194 2 23 488 33 498 0.0 582
Msa0692470 AT3G02250.1 58.491 477 190 4 15 488 27 498 0.0 576
Msa0692470 AT2G37980.1 46.453 437 227 5 73 507 202 633 5.90e-138 412
Msa0692470 AT3G54100.1 46.065 432 216 7 73 497 198 619 1.07e-133 401
Msa0692470 AT5G35570.1 47.407 405 206 5 96 498 250 649 2.45e-132 398
Msa0692470 AT1G22460.1 45.370 432 216 6 76 490 130 558 2.54e-129 388
Msa0692470 AT5G64600.1 46.778 419 200 8 87 489 103 514 1.80e-128 384
Msa0692470 AT5G01100.1 47.132 401 204 5 97 493 216 612 2.09e-128 387
Msa0692470 AT1G76270.1 44.584 397 204 7 100 494 109 491 1.93e-104 324
Msa0692470 AT4G38390.1 43.500 400 212 7 97 494 123 510 1.66e-102 318
Msa0692470 AT1G20550.1 42.157 408 220 7 100 505 112 505 4.38e-102 318
Msa0692470 AT4G16650.2 43.521 409 207 10 89 490 113 504 3.26e-95 299
Msa0692470 AT4G16650.1 43.521 409 207 10 89 490 113 504 3.26e-95 299
Msa0692470 AT1G04910.1 36.853 464 259 10 50 506 57 493 8.82e-92 290
Msa0692470 AT4G24530.1 37.674 430 219 9 97 490 101 517 8.61e-90 284
Msa0692470 AT3G26370.1 38.974 390 218 7 90 464 152 536 1.82e-89 285
Msa0692470 AT5G65470.1 35.581 430 226 9 99 490 87 503 1.34e-86 276
Msa0692470 AT1G11990.1 39.173 411 222 10 98 491 191 590 2.09e-82 267
Msa0692470 AT1G62330.1 34.862 436 232 8 98 489 222 649 2.85e-82 268
Msa0692470 AT1G38065.1 36.427 431 238 11 79 489 24 438 5.56e-82 263
Msa0692470 AT1G38065.2 37.046 413 230 10 97 489 26 428 6.69e-82 262
Msa0692470 AT1G38131.1 37.046 413 230 10 97 489 155 557 1.72e-80 262
Msa0692470 AT1G11990.2 36.161 448 221 10 98 491 176 612 1.82e-77 255
Msa0692470 AT5G63390.1 38.000 400 228 9 100 493 167 552 1.94e-76 251
Msa0692470 AT1G29200.4 37.931 435 219 11 97 490 70 494 2.61e-76 248
Msa0692470 AT1G29200.1 37.931 435 219 11 97 490 70 494 2.61e-76 248
Msa0692470 AT1G35510.1 35.012 417 240 10 92 490 154 557 3.94e-75 248
Msa0692470 AT1G29200.2 37.931 435 219 11 97 490 186 610 4.79e-75 248
Msa0692470 AT2G01480.1 36.314 369 213 7 97 449 154 516 1.23e-74 246
Msa0692470 AT1G14970.3 34.140 413 245 10 97 493 9 410 1.45e-74 241
Msa0692470 AT1G14970.2 34.140 413 245 10 97 493 35 436 2.47e-74 242
Msa0692470 AT2G01480.2 36.695 357 207 6 97 437 154 507 2.91e-74 244
Msa0692470 AT1G29200.3 37.762 429 216 11 103 490 2 420 4.60e-74 240
Msa0692470 AT1G14970.1 34.140 413 245 10 97 493 155 556 3.30e-73 242
Msa0692470 AT2G44500.1 37.626 396 227 10 100 489 180 561 5.68e-73 242
Msa0692470 AT3G07900.1 34.634 410 247 8 84 489 180 572 5.12e-69 231
Msa0692470 AT1G52630.1 32.708 373 224 10 90 458 70 419 5.47e-59 201
Msa0692470 AT3G03810.2 35.855 304 178 7 91 379 83 384 8.56e-50 181
Msa0692470 AT3G03810.1 35.855 304 178 7 91 379 83 384 8.56e-50 181
Msa0692470 AT1G52630.2 31.054 351 218 9 112 458 1 331 9.97e-50 174
Msa0692470 AT3G26370.2 39.171 217 119 5 90 296 152 365 1.11e-45 164
Msa0692470 AT3G30300.2 33.333 306 180 7 91 379 97 395 2.87e-43 163
Msa0692470 AT3G30300.1 33.333 306 180 7 91 379 97 395 2.87e-43 163
Msa0692470 AT2G44500.2 39.914 233 127 7 100 326 180 405 3.62e-39 147
Msa0692470 AT1G51630.1 24.845 322 192 9 96 406 90 372 6.95e-19 89.4

Find 262 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTTTGTTGCAGTGTTTA+AGG 0.136425 4_4:+61026247 Msa0692470:five_prime_UTR
TTGATCATGGTCCCCTTTAA+AGG 0.174900 4_4:+61030744 Msa0692470:three_prime_UTR
TTATACAACTATACTGAATT+TGG 0.182459 4_4:-61030523 Msa0692480:three_prime_UTR
CAAATTCTGTGGACACAATT+TGG 0.185076 4_4:+61026123 Msa0692470:five_prime_UTR
AGCAAGTTCTTAATCATTAT+TGG 0.190620 4_4:-61025646 None:intergenic
CCATCTGTGATGAATGATTT+TGG 0.203102 4_4:-61029802 None:intergenic
AAAGTTCTGCTGCAACTTTC+TGG 0.203760 4_4:+61031874 Msa0692470:three_prime_UTR
ATTGCAGCCGGTGAGATTTA+TGG 0.227102 4_4:+61029428 Msa0692470:CDS
TGGCATTCCAATTTCTTTAC+TGG 0.232585 4_4:+61026591 Msa0692470:CDS
TTGCAGATTTGTGTTAATTT+TGG 0.236857 4_4:+61026344 Msa0692470:intron
ATAGACATTTCAAATATTCT+TGG 0.242260 4_4:-61025688 None:intergenic
GGGTACCGATGCTTTCTTAT+TGG 0.244903 4_4:-61031492 Msa0692480:CDS
TCAGATATGCATTCCCTTCA+TGG 0.261168 4_4:+61029288 Msa0692470:intron
GATGGCTGCTTTGGATTTCA+TGG 0.269401 4_4:+61029820 Msa0692470:CDS
TGCATTCAATCAACCTTTAA+AGG 0.269412 4_4:-61030757 Msa0692480:three_prime_UTR
AGATTGCTCTTGCATACTTA+TGG 0.269547 4_4:-61030345 Msa0692480:three_prime_UTR
AGTAAATCCAGTAAAGAAAT+TGG 0.278555 4_4:-61026598 None:intergenic
ACCAGCTTCAAATTCAATTC+TGG 0.283543 4_4:+61026183 Msa0692470:five_prime_UTR
CACCCCTCAAATTGAGAATC+TGG 0.293410 4_4:+61028891 Msa0692470:CDS
TGCTTTGGATTTCATGGTTT+CGG 0.294885 4_4:+61029826 Msa0692470:CDS
CAAAATACTTCTAATCTTGC+AGG 0.301113 4_4:-61030888 Msa0692480:exon
ACCAGCAAGGGCGGATTTGC+AGG 0.304466 4_4:+61031379 Msa0692470:three_prime_UTR
TCCTTTCTTTCCATTCTCAT+TGG 0.305081 4_4:+61026013 Msa0692470:five_prime_UTR
TTCATCACAGATGGCTGCTT+TGG 0.305983 4_4:+61029811 Msa0692470:CDS
TTCTAAGAGTGTCCTGCAAT+GGG 0.310538 4_4:+61027893 Msa0692470:CDS
TTGCTTGATATGCATCAAAA+TGG 0.313563 4_4:+61030081 Msa0692470:CDS
CATCTTTGCAAGCCTCTATA+TGG 0.317158 4_4:-61030468 Msa0692480:three_prime_UTR
CTTTCTGGCTCTGATACATT+TGG 0.328912 4_4:+61031889 Msa0692470:three_prime_UTR
CTAAGTTTCTGTAGATCAAT+TGG 0.331955 4_4:-61028838 None:intergenic
AAGGATTTCTTATCAAGTTC+CGG 0.337356 4_4:-61028076 None:intergenic
GCTTTCTCAGGTTGTACTCT+TGG 0.343079 4_4:+61028991 Msa0692470:CDS
GCAGAGTTGGCTCTGGACTA+TGG 0.343115 4_4:-61031707 Msa0692480:CDS
ATGCAAGAGCAATCTGAAAA+TGG 0.345318 4_4:+61030353 Msa0692470:three_prime_UTR
AACTTGATAAGAAATCCTTT+TGG 0.353716 4_4:+61028080 Msa0692470:CDS
GCCTGCAAATCCGCCCTTGC+TGG 0.360260 4_4:-61031380 Msa0692480:CDS
TAGAAATAATCCTCCTCCTT+TGG 0.360561 4_4:-61030198 Msa0692480:three_prime_UTR
TAGCTCTCATGCAGGTATTC+CGG 0.361952 4_4:+61030015 Msa0692470:intron
CCAGCTTCAAATTCAATTCT+GGG 0.362826 4_4:+61026184 Msa0692470:five_prime_UTR
AACAACAGTATGTCATTAAC+TGG 0.364991 4_4:+61030854 Msa0692470:three_prime_UTR
CATTGTGCTGTGGACATGTT+TGG 0.367522 4_4:+61026542 Msa0692470:CDS
CACTGTTCAGAGACTCCATC+TGG 0.373117 4_4:-61031466 Msa0692480:CDS
GCATTCAATCAACCTTTAAA+GGG 0.374835 4_4:-61030756 Msa0692480:three_prime_UTR
TGCTCTTGCATACTTATGGT+TGG 0.387006 4_4:-61030341 Msa0692480:three_prime_UTR
ACCTTTATTCCTACCTATGA+TGG 0.388352 4_4:+61029860 Msa0692470:CDS
GATCTTCGAGCAGAAAGAAT+TGG 0.388839 4_4:-61030998 Msa0692480:CDS
AGCTAACAGGAGGCATCTCC+AGG 0.388940 4_4:-61028312 None:intergenic
GCTCTTGCATACTTATGGTT+GGG 0.392646 4_4:-61030340 Msa0692480:three_prime_UTR
ATGGACATGCTGGCTTTCTC+AGG 0.395187 4_4:+61028979 Msa0692470:CDS
TGCCCCAGATTCTCAATTTG+AGG 0.396144 4_4:-61028895 None:intergenic
TCACATGCGTTCACCGTAGA+AGG 0.396385 4_4:+61030780 Msa0692470:three_prime_UTR
TTCTGTCAAGGCAGGAGAAC+AGG 0.398267 4_4:-61032099 Msa0692480:intron
GAACCTCACATTGGTTGTTC+CGG 0.404001 4_4:+61028057 Msa0692470:CDS
CCATCTTATTGGACCGGAAA+AGG 0.405140 4_4:+61030049 Msa0692470:CDS
ACAAGCTGCAGGCATGTAAT+GGG 0.405918 4_4:+61030693 Msa0692470:three_prime_UTR
CTCAAGGATCTTGGACTTTG+CGG 0.406199 4_4:-61030940 Msa0692480:CDS
GAAAGGAGGCTCAAGGATCT+TGG 0.407166 4_4:-61030949 Msa0692480:CDS
TATGCATATCGATCTGCATT+TGG 0.408825 4_4:+61031674 Msa0692470:three_prime_UTR
TTCTCCTGCCTTGACAGAAA+GGG 0.411526 4_4:+61032103 Msa0692470:three_prime_UTR
TACAAGCTGCAGGCATGTAA+TGG 0.411895 4_4:+61030692 Msa0692470:three_prime_UTR
CTGAAAATGGCTCCTTCCCT+CGG 0.419876 4_4:+61030366 Msa0692470:three_prime_UTR
AGTGCTACTAATCTCAGATA+TGG 0.428804 4_4:+61031518 Msa0692470:three_prime_UTR
GCCTTGGTTATGCAAGCCTT+AGG 0.432969 4_4:+61029380 Msa0692470:CDS
CCCATCATAGGTAGGAATAA+AGG 0.436770 4_4:-61029861 None:intergenic
GTGCATGGATTCAAAGGTTT+GGG 0.437538 4_4:-61025833 None:intergenic
GCAGGAAATTATACTAGTAA+TGG 0.439060 4_4:+61027868 Msa0692470:intron
TTTCCTTGATATGGAAGAGC+TGG 0.441012 4_4:+61031932 Msa0692470:three_prime_UTR
TTTCTTGATAATATTCCAAC+TGG 0.444121 4_4:+61030968 Msa0692470:three_prime_UTR
TTTCTAAGAGTGTCCTGCAA+TGG 0.444915 4_4:+61027892 Msa0692470:CDS
ATACCTACGGTCTGCCCAAA+AGG 0.445579 4_4:-61028095 None:intergenic
AGGAAATAGTGTCTGAAGAA+AGG 0.445827 4_4:+61029318 Msa0692470:CDS
GATTTCATGGTTTCGGTAGC+CGG 0.450519 4_4:+61029833 Msa0692470:CDS
GGAACTGCTGTAACTCATCA+AGG 0.452325 4_4:-61029781 None:intergenic
TGTGCATGGATTCAAAGGTT+TGG 0.454873 4_4:-61025834 None:intergenic
TGAAAAGTGTGTGAAGGTTA+TGG 0.457566 4_4:+61026370 Msa0692470:five_prime_UTR
AAAAGTCCATCTTATTGGAC+CGG 0.458534 4_4:+61030043 Msa0692470:CDS
ATAGTTTATTACCTGTTCAA+TGG 0.458942 4_4:+61031346 Msa0692470:intron
TGAAGTGTGTGACAAAGAAA+TGG 0.461488 4_4:+61026407 Msa0692470:exon
GAAGTGCACCACCTTGTGTT+TGG 0.463947 4_4:-61028779 None:intergenic
AAGCTGCTCCTTTGATTCCA+AGG 0.468221 4_4:+61026481 Msa0692470:CDS
GTTCTCCTGCCTTGACAGAA+AGG 0.468467 4_4:+61032102 Msa0692470:three_prime_UTR
TTGGGAGACCATTATTTGCT+AGG 0.469220 4_4:-61028819 None:intergenic
GCCCCAGATTCTCAATTTGA+GGG 0.469715 4_4:-61028894 None:intergenic
TTATTCTGGCAGTGGCTTCG+AGG 0.470272 4_4:+61028189 Msa0692470:intron
GAATAAACCAAACACGAAAA+CGG 0.470528 4_4:-61026506 None:intergenic
TCCAATGAGAATGGAAAGAA+AGG 0.471672 4_4:-61026014 None:intergenic
CTAACTTGCAGGAAGTAGAA+TGG 0.473374 4_4:-61026685 None:intergenic
TAAGTTTCTGTAGATCAATT+GGG 0.475386 4_4:-61028837 None:intergenic
TGGAGATGCCTCCTGTTAGC+TGG 0.475776 4_4:+61028314 Msa0692470:CDS
TTGTGACTGTGAGTGAACTA+TGG 0.476628 4_4:+61026571 Msa0692470:CDS
AGATATGGAAGCATCCCTTC+TGG 0.477120 4_4:+61031533 Msa0692470:three_prime_UTR
CTCCTCATTATCACGGCTCA+TGG 0.477204 4_4:+61031427 Msa0692470:three_prime_UTR
AAGCAATGCAGAGTTGGCTC+TGG 0.478444 4_4:-61031714 Msa0692480:CDS
TAACTTGCAGGAAGTAGAAT+GGG 0.479064 4_4:-61026684 None:intergenic
CAAACACGAAAACGGCTCCT+TGG 0.481546 4_4:-61026498 None:intergenic
CTCCATCTGGGGTCATCTTG+AGG 0.481584 4_4:-61031453 Msa0692480:CDS
GAAATATATGTTCCATATAG+AGG 0.482623 4_4:+61030456 Msa0692470:three_prime_UTR
AATTGTGTGCATGGATTCAA+AGG 0.483270 4_4:-61025839 None:intergenic
ACCCCTCAAATTGAGAATCT+GGG 0.484445 4_4:+61028892 Msa0692470:CDS
AAGAGGCAAATCTAGATTCA+AGG 0.484970 4_4:-61031080 Msa0692480:CDS
GAGGGGTGAATTTAAGTGCC+TGG 0.487600 4_4:-61028876 None:intergenic
GTCAAATGAAAAGTATTACT+TGG 0.489028 4_4:+61028336 Msa0692470:CDS
CTCAGATGCAATGCCACAAA+AGG 0.490594 4_4:-61028949 None:intergenic
ACAACTATACTGAATTTGGT+GGG 0.497845 4_4:-61030519 Msa0692480:three_prime_UTR
GGGATTACCTATTTGCCCTA+AGG 0.498091 4_4:-61032130 Msa0692480:CDS
AAACAAAAGCAATGCAGAGT+TGG 0.498255 4_4:-61031720 Msa0692480:CDS
ATTTCCTTCTCTCTCCATGA+AGG 0.500444 4_4:-61029302 None:intergenic
AGGTGAGGATCCAATGAGAA+TGG 0.501136 4_4:-61026023 None:intergenic
GTAGATGAATTGAGAGATCC+AGG 0.502785 4_4:-61025811 None:intergenic
GATGCACGCCTAGCAAATAA+TGG 0.504541 4_4:+61028811 Msa0692470:CDS
CCCAGAATTGAATTTGAAGC+TGG 0.505271 4_4:-61026184 None:intergenic
ATAACCAAGGCAGTCTCCTC+CGG 0.505709 4_4:-61029368 None:intergenic
CAATTGATCTACAGAAACTT+AGG 0.505738 4_4:+61028839 Msa0692470:CDS
ATGGAAAGAAAGGATCAAAT+CGG 0.506036 4_4:-61026004 None:intergenic
GAATTTGAAGCTGGTGATTG+AGG 0.506597 4_4:-61026175 None:intergenic
ACAGGTTCACGAAAAGAGAA+TGG 0.506682 4_4:+61030140 Msa0692470:CDS
CATGCCTGCAGCTTGTAAAG+TGG 0.508006 4_4:-61030686 Msa0692480:three_prime_UTR
CCGAGGATCTCAAGCGGATG+AGG 0.509548 4_4:+61029031 Msa0692470:CDS
TAGCCAGCTCTTCCATATCA+AGG 0.509727 4_4:-61031935 Msa0692480:intron
TATGCATACACCTTGACACT+GGG 0.512341 4_4:-61031659 Msa0692480:CDS
GTCTGAAGAAAGGAGATCCC+AGG 0.512801 4_4:+61029328 Msa0692470:CDS
TACAACTATACTGAATTTGG+TGG 0.513828 4_4:-61030520 Msa0692480:three_prime_UTR
TTGCGCCTCAAAATACAGCT+TGG 0.514584 4_4:+61031846 Msa0692470:three_prime_UTR
GCAGTCTCCTCCGGTGTCAA+AGG 0.517244 4_4:-61029359 None:intergenic
GTGTCAAAGGACATAGACCC+TGG 0.517880 4_4:-61029346 None:intergenic
TGGGTTGTAATAATTGTGGC+CGG 0.524912 4_4:+61030712 Msa0692470:three_prime_UTR
CACATTCATAACTGTGCAGT+TGG 0.525016 4_4:-61031778 Msa0692480:intron
GACACCGGAGGAGACTGCCT+TGG 0.525025 4_4:+61029364 Msa0692470:CDS
GCATCTACAAACTCATTCCA+TGG 0.525256 4_4:-61030111 Msa0692480:three_prime_UTR
GGAAGCATCCCTTCTGGAAG+AGG 0.525978 4_4:+61031539 Msa0692470:three_prime_UTR
GCCCATGAGCCGTGATAATG+AGG 0.527832 4_4:-61031429 Msa0692480:CDS
TGAAAATGGCTCCTTCCCTC+GGG 0.528010 4_4:+61030367 Msa0692470:three_prime_UTR
TTGAAGAGCTTCAAATTCTG+TGG 0.528024 4_4:+61026112 Msa0692470:five_prime_UTR
ATCTGAGATTAGTAGCACTA+GGG 0.531413 4_4:-61031514 Msa0692480:CDS
CTAAGAGTGTCCTGCAATGG+GGG 0.532495 4_4:+61027895 Msa0692470:CDS
AATTTGAAGCTGGTGATTGA+GGG 0.533657 4_4:-61026174 None:intergenic
TCTCCTGCCTTGACAGAAAG+GGG 0.533728 4_4:+61032104 Msa0692470:three_prime_UTR
CCTCATCCGCTTGAGATCCT+CGG 0.534275 4_4:-61029031 None:intergenic
GTTTGTAGATGCTGTGCGAC+AGG 0.534296 4_4:+61030122 Msa0692470:CDS
CTTGGACTTTGCGGTGAAAG+TGG 0.534968 4_4:-61030931 Msa0692480:CDS
CCTTTATTCCTACCTATGAT+GGG 0.535492 4_4:+61029861 Msa0692470:CDS
AGTTGGAATATTATCAAGAA+AGG 0.536592 4_4:-61030966 Msa0692480:CDS
ATCGCAAATGTAGCCTTCTA+CGG 0.536666 4_4:-61030793 Msa0692480:three_prime_UTR
AGAATTGGAACTAGACCAGT+TGG 0.537321 4_4:-61030983 Msa0692480:CDS
TGAAAAGTATTACTTGGAGC+AGG 0.539964 4_4:+61028342 Msa0692470:CDS
GAAGCTGGTGATTGAGGGTG+AGG 0.542158 4_4:-61026169 None:intergenic
CCAAAATCATTCATCACAGA+TGG 0.542359 4_4:+61029802 Msa0692470:CDS
CTTCAAATTCAATTCTGGGT+CGG 0.542473 4_4:+61026188 Msa0692470:five_prime_UTR
TCCTCATTATCACGGCTCAT+GGG 0.543503 4_4:+61031428 Msa0692470:three_prime_UTR
TGTCTCCCGGTCAAAACCTA+AGG 0.543702 4_4:-61029396 None:intergenic
AACTATACTGAATTTGGTGG+GGG 0.544382 4_4:-61030517 Msa0692480:three_prime_UTR
TATGAAGTCAAAGGACCAGC+TGG 0.544591 4_4:-61032164 Msa0692480:CDS
CTACAAACTCATTCCATGGA+AGG 0.551044 4_4:-61030107 Msa0692480:three_prime_UTR
GCAGGATCGCAAGCTGAAAG+AGG 0.551716 4_4:-61031097 Msa0692480:intron
CACCTCAAGATGACCCCAGA+TGG 0.552036 4_4:+61031451 Msa0692470:three_prime_UTR
AAACGGCTCCTTGGAATCAA+AGG 0.552528 4_4:-61026489 None:intergenic
TCCCAAGAGAAAAGACCAGC+TGG 0.553440 4_4:+61032149 Msa0692470:three_prime_UTR
CCCCAGATTCTCAATTTGAG+GGG 0.555415 4_4:-61028893 None:intergenic
GAGATATGAGATGGACATGC+TGG 0.557518 4_4:+61028969 Msa0692470:CDS
ACTGTTCAGAGACTCCATCT+GGG 0.560536 4_4:-61031465 Msa0692480:CDS
CAGGTTCACGAAAAGAGAAT+GGG 0.560835 4_4:+61030141 Msa0692470:CDS
ATCAAAATGGAACCCTTCCA+TGG 0.561331 4_4:+61030094 Msa0692470:CDS
CAATGTAAATCTGTGTCTCC+CGG 0.564211 4_4:-61029409 None:intergenic
TTTCCTTCTCTCTCCATGAA+GGG 0.565721 4_4:-61029301 None:intergenic
CCCTCATGAGTGCCTTTGTG+AGG 0.571802 4_4:+61030227 Msa0692470:CDS
TCTAAGAGTGTCCTGCAATG+GGG 0.572836 4_4:+61027894 Msa0692470:CDS
CAACTATACTGAATTTGGTG+GGG 0.573463 4_4:-61030518 Msa0692480:three_prime_UTR
ACACAGATTTACATTGCAGC+CGG 0.575721 4_4:+61029416 Msa0692470:CDS
GGGTCTATGTCCTTTGACAC+CGG 0.576261 4_4:+61029349 Msa0692470:CDS
ACAATGATTCGACGATAAGT+CGG 0.577569 4_4:-61030168 Msa0692480:three_prime_UTR
TATAACCGCCCTCTTCCAGA+AGG 0.578293 4_4:-61031548 Msa0692480:CDS
CTCTAAGAACTTATGCCCGA+GGG 0.578429 4_4:-61030382 Msa0692480:three_prime_UTR
GTGACATGGTGACAATTGCT+CGG 0.579350 4_4:+61028029 Msa0692470:CDS
TGGGAACATGGCAAAACTTG+TGG 0.580054 4_4:+61029880 Msa0692470:CDS
ATGATCATCTGTAGTCACTC+TGG 0.581191 4_4:+61032190 Msa0692470:three_prime_UTR
GATCATGCTTATGAAGTCAA+AGG 0.581508 4_4:-61032173 Msa0692480:CDS
TAGGTGCCGTGTTAATTACC+AGG 0.582283 4_4:+61028858 Msa0692470:CDS
AGATCTCATCAATTTGCCGC+AGG 0.582417 4_4:+61031016 Msa0692470:three_prime_UTR
GATTCAGATACTTCGCGAGA+GGG 0.583952 4_4:+61028924 Msa0692470:CDS
TATCTGAGATTAGTAGCACT+AGG 0.584493 4_4:-61031515 Msa0692480:CDS
GTTCATTCTCTATGTAATCA+CGG 0.584697 4_4:+61030591 Msa0692470:three_prime_UTR
ATATGCATACACCTTGACAC+TGG 0.586569 4_4:-61031660 Msa0692480:CDS
TGTAGACAAACCAAAGGAGG+AGG 0.587728 4_4:+61030188 Msa0692470:CDS
CTCGGATATCCCCAGTGTCA+AGG 0.587901 4_4:+61031649 Msa0692470:three_prime_UTR
TACAAACTCATTCCATGGAA+GGG 0.592326 4_4:-61030106 Msa0692480:three_prime_UTR
GGTAGGAATAAAGGTGTCAC+CGG 0.594798 4_4:-61029852 None:intergenic
ACAAAGGCACTCATGAGGGT+TGG 0.596296 4_4:-61030223 Msa0692480:three_prime_UTR
CCCTCACAAAGGCACTCATG+AGG 0.597403 4_4:-61030228 Msa0692480:three_prime_UTR
TAGCAGTCGGAATAAGAGAA+GGG 0.598131 4_4:-61031050 Msa0692480:CDS
AAGAACTTATGCCCGAGGGA+AGG 0.599553 4_4:-61030378 Msa0692480:three_prime_UTR
CATTCAATCAACCTTTAAAG+GGG 0.599650 4_4:-61030755 Msa0692480:three_prime_UTR
GTAGACGTTGCTGAGACCAA+TGG 0.600772 4_4:-61031602 Msa0692480:CDS
TCAAGGCTTGCAATAGCAGT+CGG 0.600784 4_4:-61031063 Msa0692480:CDS
CACACTTTGTTCCCTCACAA+AGG 0.600880 4_4:-61030239 Msa0692480:three_prime_UTR
AACTTGTGGAAGGCCACCGC+AGG 0.602466 4_4:+61029894 Msa0692470:CDS
CCTCACAAAGGCACTCATGA+GGG 0.602588 4_4:-61030227 Msa0692480:three_prime_UTR
TGGAATATTATCAAGAAAGG+AGG 0.602703 4_4:-61030963 Msa0692480:CDS
GCCATGTTCCCATCATAGGT+AGG 0.602990 4_4:-61029869 None:intergenic
CCCCTCAAATTGAGAATCTG+GGG 0.605300 4_4:+61028893 Msa0692470:CDS
CTCCTGCCTTGACAGAAAGG+GGG 0.606795 4_4:+61032105 Msa0692470:three_prime_UTR
ACAACTCAACGGCCTCCTCA+AGG 0.607711 4_4:+61026636 Msa0692470:CDS
ATTCTGTGGACACAATTTGG+TGG 0.607748 4_4:+61026126 Msa0692470:five_prime_UTR
ATAGCAGTCGGAATAAGAGA+AGG 0.608578 4_4:-61031051 Msa0692480:CDS
AACATGGCAAAACTTGTGGA+AGG 0.609196 4_4:+61029884 Msa0692470:CDS
CCTCATGAGTGCCTTTGTGA+GGG 0.609759 4_4:+61030228 Msa0692470:CDS
TTATCAAGAAAGGAGGCTCA+AGG 0.609776 4_4:-61030956 Msa0692480:CDS
TCCTACCTATGATGGGAACA+TGG 0.610654 4_4:+61029868 Msa0692470:CDS
TCTCTAAGAACTTATGCCCG+AGG 0.611187 4_4:-61030383 Msa0692480:three_prime_UTR
GGGTTGTAATAATTGTGGCC+GGG 0.612240 4_4:+61030713 Msa0692470:three_prime_UTR
TTTGAATCAAATGCGTGCAG+CGG 0.612731 4_4:+61027918 Msa0692470:CDS
ACAAAGTGTGATGATTTGCT+AGG 0.614058 4_4:+61030252 Msa0692470:CDS
AATGGAAGTTAGATCATCAG+AGG 0.614061 4_4:+61026425 Msa0692470:exon
GGCATTTCAGATTTGTGACA+TGG 0.614628 4_4:+61028015 Msa0692470:intron
CATTGTAGACAAACCAAAGG+AGG 0.615228 4_4:+61030185 Msa0692470:CDS
TTCACCACCATAAATCTCAC+CGG 0.615230 4_4:-61029435 None:intergenic
ACTGTTGTTTGTATCTCTTG+AGG 0.620279 4_4:-61030840 Msa0692480:three_prime_UTR
GGTGAAAGTGGTGATGTCCT+TGG 0.620946 4_4:-61030919 Msa0692480:CDS
TCATTTGACCAGCTAACAGG+AGG 0.621119 4_4:-61028322 None:intergenic
AGGAATTGAGGAACAAGGTG+AGG 0.623145 4_4:-61026038 None:intergenic
ACCTAAGGCTTGCATAACCA+AGG 0.627242 4_4:-61029381 None:intergenic
GGTTGTGTGATAACCAGCAA+GGG 0.628035 4_4:+61031367 Msa0692470:three_prime_UTR
TGGTTGTGTGATAACCAGCA+AGG 0.629031 4_4:+61031366 Msa0692470:three_prime_UTR
GTATATATCACACAACTCAA+CGG 0.629814 4_4:+61026625 Msa0692470:CDS
GAAAAGTGGATACTCGACCC+TGG 0.636896 4_4:+61028294 Msa0692470:CDS
AGCAGTCGGAATAAGAGAAG+GGG 0.636940 4_4:-61031049 Msa0692480:CDS
AATCATTGTAGACAAACCAA+AGG 0.637419 4_4:+61030182 Msa0692470:CDS
ATTCAGATACTTCGCGAGAG+GGG 0.637675 4_4:+61028925 Msa0692470:CDS
GAACTGCTGTAACTCATCAA+GGG 0.638982 4_4:-61029780 None:intergenic
GAAGCATCCCTTCTGGAAGA+GGG 0.639736 4_4:+61031540 Msa0692470:three_prime_UTR
ATACTAGCTCCTCATTATCA+CGG 0.640006 4_4:+61031420 Msa0692470:three_prime_UTR
ATATAAGGAATTGAGGAACA+AGG 0.641155 4_4:-61026043 None:intergenic
TCTGAAGAAAGGAGATCCCA+GGG 0.644505 4_4:+61029329 Msa0692470:CDS
TGTCAAAGGACATAGACCCT+GGG 0.644623 4_4:-61029345 None:intergenic
TTTGTTCAACCATTGTGCTG+TGG 0.645471 4_4:+61026532 Msa0692470:CDS
TGGTTGTGAAAAGTGTGTGA+AGG 0.647524 4_4:+61026364 Msa0692470:five_prime_UTR
CTGTAGTCACTCTGGCACTG+TGG 0.648083 4_4:+61032198 Msa0692470:three_prime_UTR
TGATTCAGATACTTCGCGAG+AGG 0.649037 4_4:+61028923 Msa0692470:CDS
ATTCCCTTCATGGAGAGAGA+AGG 0.650807 4_4:+61029298 Msa0692470:CDS
TGAAGGTTATGGTGATGAAG+TGG 0.651256 4_4:+61026381 Msa0692470:five_prime_UTR
CTTGCAGGAAGTAGAATGGG+AGG 0.651294 4_4:-61026681 None:intergenic
GTAATGGGTTGTAATAATTG+TGG 0.651529 4_4:+61030708 Msa0692470:three_prime_UTR
ATAACCGCCCTCTTCCAGAA+GGG 0.651691 4_4:-61031547 Msa0692480:CDS
TGATTCCAATAAGAAAGCAT+CGG 0.654051 4_4:+61031487 Msa0692470:three_prime_UTR
AATATAACATCTCCTTGAGG+AGG 0.657753 4_4:-61026648 None:intergenic
TAAGTGCCTGGTAATTAACA+CGG 0.657828 4_4:-61028864 None:intergenic
ATGGAAGTTAGATCATCAGA+GGG 0.666260 4_4:+61026426 Msa0692470:CDS
TTGCACTAATGAAGAAGCCG+AGG 0.669813 4_4:+61029014 Msa0692470:CDS
TCTGAGATTAGTAGCACTAG+GGG 0.673869 4_4:-61031513 Msa0692480:CDS
CTGTTCAGAGACTCCATCTG+GGG 0.675062 4_4:-61031464 Msa0692480:CDS
CAAACATGTCCACAGCACAA+TGG 0.677892 4_4:-61026541 None:intergenic
TGTGTGATAACCAGCAAGGG+CGG 0.678647 4_4:+61031370 Msa0692470:three_prime_UTR
AAGAAGCCGAGGATCTCAAG+CGG 0.678663 4_4:+61029025 Msa0692470:CDS
GCTAACAGGAGGCATCTCCA+GGG 0.682429 4_4:-61028311 None:intergenic
ATTGCATCTGAGATATGAGA+TGG 0.683390 4_4:+61028960 Msa0692470:CDS
ATGCATACACCTTGACACTG+GGG 0.698561 4_4:-61031658 Msa0692480:CDS
TCTATGTCCTTTGACACCGG+AGG 0.698582 4_4:+61029352 Msa0692470:CDS
GCAAATATAACATCTCCTTG+AGG 0.698776 4_4:-61026651 None:intergenic
GTTCCGGAACAACCAATGTG+AGG 0.701296 4_4:-61028060 None:intergenic
GCATCCCTTCTGGAAGAGGG+CGG 0.703925 4_4:+61031543 Msa0692470:three_prime_UTR
GCAGCCGGTGAGATTTATGG+TGG 0.721413 4_4:+61029431 Msa0692470:CDS
GAGTAAATAGATACCTGCGG+TGG 0.724695 4_4:-61029907 None:intergenic
CTGAGATTAGTAGCACTAGG+GGG 0.740933 4_4:-61031512 Msa0692480:CDS
TGAGGAGCTAGTATGCAAAG+CGG 0.776917 4_4:-61031411 Msa0692480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTAAAAGACTTTAA+CGG + chr4_4:61025761-61025780 Msa0692470:five_prime_UTR 10.0%
!!! TTTTAAGAAAGAAAAATATA+AGG - chr4_4:61026061-61026080 None:intergenic 10.0%
!!! TTTAACTTTAAAAGTAATTA+TGG - chr4_4:61026947-61026966 None:intergenic 10.0%
!!! AATAAGATATATATTTCTTT+TGG - chr4_4:61029996-61030015 None:intergenic 10.0%
!! AAAAAAAGAGATTACAAAAT+GGG - chr4_4:61025730-61025749 None:intergenic 15.0%
!! ATTTAGCAATAATAGTAATA+TGG + chr4_4:61026833-61026852 Msa0692470:intron 15.0%
!!! TAAATGGATTTATTGATTTT+TGG - chr4_4:61027373-61027392 None:intergenic 15.0%
!!! AATTTTCCTTTAAATATGAT+AGG + chr4_4:61027524-61027543 Msa0692470:intron 15.0%
!!! AAGTTGTTTTTTTTTTATTC+TGG + chr4_4:61028175-61028194 Msa0692470:intron 15.0%
!! TGAAAAGATATACATAAAAA+AGG - chr4_4:61029083-61029102 None:intergenic 15.0%
!!! ATATTTCTTTTGGAAATTTA+GGG - chr4_4:61029986-61030005 None:intergenic 15.0%
!!! TATATTTCTTTTGGAAATTT+AGG - chr4_4:61029987-61030006 None:intergenic 15.0%
!! ATAGACATTTCAAATATTCT+TGG - chr4_4:61025691-61025710 None:intergenic 20.0%
!! GAAAAAAAGAGATTACAAAA+TGG - chr4_4:61025731-61025750 None:intergenic 20.0%
!!! ATTTTTATTCACATTCAAGT+GGG - chr4_4:61025958-61025977 None:intergenic 20.0%
!! AAGAAAAATATAAGGAATTG+AGG - chr4_4:61026053-61026072 None:intergenic 20.0%
!! TTGCTAAATTAAATCATATG+TGG - chr4_4:61026822-61026841 None:intergenic 20.0%
!! ATGGATTTAATGTATATTCA+CGG + chr4_4:61026852-61026871 Msa0692470:intron 20.0%
!! TCTAATAAAAACACAATGTT+AGG - chr4_4:61027038-61027057 None:intergenic 20.0%
!!! AACATTGTGTTTTTATTAGA+TGG + chr4_4:61027038-61027057 Msa0692470:intron 20.0%
!!! AAAAAAATTCTTTTCCCAAA+GGG - chr4_4:61027114-61027133 None:intergenic 20.0%
!!! AAAAAAAATTCTTTTCCCAA+AGG - chr4_4:61027115-61027134 None:intergenic 20.0%
!!! GGGAAAAGAATTTTTTTTTT+TGG + chr4_4:61027117-61027136 Msa0692470:intron 20.0%
!!! CAACAATAGTTTAAAATAAG+TGG - chr4_4:61027449-61027468 None:intergenic 20.0%
!!! AAAGTACCTATCATATTTAA+AGG - chr4_4:61027533-61027552 None:intergenic 20.0%
!! ACATAAGTAAGTGTAATATT+GGG - chr4_4:61027681-61027700 None:intergenic 20.0%
!! AACATAAGTAAGTGTAATAT+TGG - chr4_4:61027682-61027701 None:intergenic 20.0%
!! ATATAATAGGAATAAAGAAG+TGG - chr4_4:61027965-61027984 None:intergenic 20.0%
!! ATTGAAGCTTATCATATAAT+AGG - chr4_4:61027978-61027997 None:intergenic 20.0%
!! TTATGTATAATACATCAATC+AGG + chr4_4:61028399-61028418 Msa0692470:intron 20.0%
!!! AAAAGTACAAGTTTATGATA+TGG + chr4_4:61028567-61028586 Msa0692470:intron 20.0%
!!! TAGTATTTTAGCAACTAAAA+TGG + chr4_4:61028598-61028617 Msa0692470:intron 20.0%
!! ATATGTACTACTGAAAATAA+GGG - chr4_4:61028713-61028732 None:intergenic 20.0%
!! TATATGTACTACTGAAAATA+AGG - chr4_4:61028714-61028733 None:intergenic 20.0%
!! TCAATACTATAAACAAAAAG+GGG - chr4_4:61029526-61029545 None:intergenic 20.0%
!! GTCAATACTATAAACAAAAA+GGG - chr4_4:61029527-61029546 None:intergenic 20.0%
!! TGTCAATACTATAAACAAAA+AGG - chr4_4:61029528-61029547 None:intergenic 20.0%
!!! TTTACTTTAGGTTAAAAAAG+AGG + chr4_4:61029748-61029767 Msa0692470:intron 20.0%
!!! TTTTAAAAAGTCCATCTTAT+TGG + chr4_4:61030038-61030057 Msa0692470:CDS 20.0%
!!! TTTTGTATACATGATTTTGT+AGG + chr4_4:61030407-61030426 Msa0692470:three_prime_UTR 20.0%
!! TTATACAACTATACTGAATT+TGG - chr4_4:61030526-61030545 Msa0692480:three_prime_UTR 20.0%
!! TGTAATGAAATATATAGACA+CGG + chr4_4:61031254-61031273 Msa0692470:intron 20.0%
!!! TGCTTTTGTTTAAATCATAT+TGG + chr4_4:61031732-61031751 Msa0692470:three_prime_UTR 20.0%
! AGCAAGTTCTTAATCATTAT+TGG - chr4_4:61025649-61025668 None:intergenic 25.0%
!!! ATTTTAAAAGACTTTAACGG+TGG + chr4_4:61025764-61025783 Msa0692470:five_prime_UTR 25.0%
!!! AATTTTCTTTCTAGTTAACC+TGG + chr4_4:61025793-61025812 Msa0692470:five_prime_UTR 25.0%
!! CATTTTTATTCACATTCAAG+TGG - chr4_4:61025959-61025978 None:intergenic 25.0%
!! TTGCAGATTTGTGTTAATTT+TGG + chr4_4:61026344-61026363 Msa0692470:intron 25.0%
! AGTAAATCCAGTAAAGAAAT+TGG - chr4_4:61026601-61026620 None:intergenic 25.0%
!! CAAACATTTTAAATGATCTG+AGG - chr4_4:61026917-61026936 None:intergenic 25.0%
!!! TTTTCTGCTTGTTATATAGT+AGG + chr4_4:61027140-61027159 Msa0692470:intron 25.0%
! GATGGTCAATATCAATTAAT+TGG - chr4_4:61027229-61027248 None:intergenic 25.0%
!!! TATTGACCATCATGTTTTTT+TGG + chr4_4:61027238-61027257 Msa0692470:intron 25.0%
!!! GATTTTTGGTTAGAATCTAA+TGG - chr4_4:61027359-61027378 None:intergenic 25.0%
! CATAAGTAAGTGTAATATTG+GGG - chr4_4:61027680-61027699 None:intergenic 25.0%
!!! ATGCAAGATAGTTTTACATA+AGG + chr4_4:61027717-61027736 Msa0692470:intron 25.0%
!!! TGCAAGATAGTTTTACATAA+GGG + chr4_4:61027718-61027737 Msa0692470:intron 25.0%
! ACAAAATACTTATACGTAGA+TGG + chr4_4:61027755-61027774 Msa0692470:intron 25.0%
! CAAAATACTTATACGTAGAT+GGG + chr4_4:61027756-61027775 Msa0692470:intron 25.0%
! CAATGTTTAATTACCAGATT+TGG + chr4_4:61027994-61028013 Msa0692470:intron 25.0%
!! AACTTGATAAGAAATCCTTT+TGG + chr4_4:61028080-61028099 Msa0692470:CDS 25.0%
!! ACTTGATAAGAAATCCTTTT+GGG + chr4_4:61028081-61028100 Msa0692470:CDS 25.0%
! CATAACAAATGATATACCTA+CGG - chr4_4:61028111-61028130 None:intergenic 25.0%
!!! TTTTTTTTTTATTCTGGCAG+TGG + chr4_4:61028181-61028200 Msa0692470:intron 25.0%
!! CTTTTCCTAGTAAACTTTTT+GGG - chr4_4:61028280-61028299 None:intergenic 25.0%
!! ACTTTTCCTAGTAAACTTTT+TGG - chr4_4:61028281-61028300 None:intergenic 25.0%
! AAAAAGTTTACTAGGAAAAG+TGG + chr4_4:61028280-61028299 Msa0692470:CDS 25.0%
!!! GTCAAATGAAAAGTATTACT+TGG + chr4_4:61028336-61028355 Msa0692470:CDS 25.0%
! TTAAAGTTTGATACAGTGAT+TGG + chr4_4:61028441-61028460 Msa0692470:intron 25.0%
! TGGTTAATGATTCTTTGATA+TGG + chr4_4:61028461-61028480 Msa0692470:intron 25.0%
!! TTTAGAGTTATTAGCAGATA+TGG + chr4_4:61028501-61028520 Msa0692470:intron 25.0%
!!! AACAATGATAAAGTGCTTTT+TGG - chr4_4:61028653-61028672 None:intergenic 25.0%
! TAAGTTTCTGTAGATCAATT+GGG - chr4_4:61028840-61028859 None:intergenic 25.0%
!! TATATCTTTTCATGAGCAAT+AGG + chr4_4:61029091-61029110 Msa0692470:intron 25.0%
! GCAACACAAATTATAAAAGA+AGG - chr4_4:61029118-61029137 None:intergenic 25.0%
! ATTCCACTTTACTTTACTTT+AGG + chr4_4:61029736-61029755 Msa0692470:intron 25.0%
! TAACCTAAAGTAAAGTAAAG+TGG - chr4_4:61029742-61029761 None:intergenic 25.0%
!! TTAGGTTAAAAAAGAGGTAT+TGG + chr4_4:61029754-61029773 Msa0692470:intron 25.0%
! ATCTAATATAGAAGCTATTC+TGG + chr4_4:61029947-61029966 Msa0692470:intron 25.0%
!!! TAAGATGGACTTTTTAAAAC+CGG - chr4_4:61030037-61030056 Msa0692480:three_prime_UTR 25.0%
! GAAATATATGTTCCATATAG+AGG + chr4_4:61030456-61030475 Msa0692470:three_prime_UTR 25.0%
!!! AAGATTAGAAGTATTTTGCA+AGG + chr4_4:61030893-61030912 Msa0692470:three_prime_UTR 25.0%
! AGTTGGAATATTATCAAGAA+AGG - chr4_4:61030969-61030988 Msa0692480:CDS 25.0%
!! TTTCTTGATAATATTCCAAC+TGG + chr4_4:61030968-61030987 Msa0692470:three_prime_UTR 25.0%
! GGTAATAAACTATACATTCA+GGG - chr4_4:61031339-61031358 Msa0692480:intron 25.0%
! AGGTAATAAACTATACATTC+AGG - chr4_4:61031340-61031359 Msa0692480:intron 25.0%
! ATAGTTTATTACCTGTTCAA+TGG + chr4_4:61031346-61031365 Msa0692470:intron 25.0%
! ATGAAAAGAAACATATGAAG+AGG + chr4_4:61032063-61032082 Msa0692470:intron 25.0%
!!! CAGTTTTTTAATTGTGTGCA+TGG - chr4_4:61025851-61025870 None:intergenic 30.0%
ATGGAAAGAAAGGATCAAAT+CGG - chr4_4:61026007-61026026 None:intergenic 30.0%
ATATAAGGAATTGAGGAACA+AGG - chr4_4:61026046-61026065 None:intergenic 30.0%
GAATAAACCAAACACGAAAA+CGG - chr4_4:61026509-61026528 None:intergenic 30.0%
GTATATATCACACAACTCAA+CGG + chr4_4:61026625-61026644 Msa0692470:CDS 30.0%
! AGATAGAAAAACTAACTTGC+AGG - chr4_4:61026699-61026718 None:intergenic 30.0%
!! AATGTTTTTGTTTGCTTGAG+TGG + chr4_4:61026740-61026759 Msa0692470:intron 30.0%
! TATGTGTTGATAAACCCTTT+GGG + chr4_4:61027097-61027116 Msa0692470:intron 30.0%
CAAAGCAAATAATCTCTAAC+AGG - chr4_4:61027268-61027287 None:intergenic 30.0%
AGACTTCACTCTAAACTAAA+TGG - chr4_4:61027389-61027408 None:intergenic 30.0%
!!! ATAAGTGGATCCACTTTTTT+GGG - chr4_4:61027434-61027453 None:intergenic 30.0%
!!! AATAAGTGGATCCACTTTTT+TGG - chr4_4:61027435-61027454 None:intergenic 30.0%
AAATTCTACTGAACAGCTAA+AGG - chr4_4:61027509-61027528 None:intergenic 30.0%
TATATACAAGGACTCATACA+GGG - chr4_4:61027598-61027617 None:intergenic 30.0%
TTATATACAAGGACTCATAC+AGG - chr4_4:61027599-61027618 None:intergenic 30.0%
TGATGGGGATATTATATACA+AGG - chr4_4:61027610-61027629 None:intergenic 30.0%
GCAGGAAATTATACTAGTAA+TGG + chr4_4:61027868-61027887 Msa0692470:intron 30.0%
TAATAGGAATAAAGAAGTGG+TGG - chr4_4:61027962-61027981 None:intergenic 30.0%
AAGGATTTCTTATCAAGTTC+CGG - chr4_4:61028079-61028098 None:intergenic 30.0%
GTACAAGTTTATGATATGGA+TGG + chr4_4:61028571-61028590 Msa0692470:intron 30.0%
CTAAGTTTCTGTAGATCAAT+TGG - chr4_4:61028841-61028860 None:intergenic 30.0%
CAATTGATCTACAGAAACTT+AGG + chr4_4:61028839-61028858 Msa0692470:CDS 30.0%
! TAAAAAAGGCATAGCAAAAC+AGG - chr4_4:61029069-61029088 None:intergenic 30.0%
!! GTTGCATGATTTGTTGAATT+TGG + chr4_4:61029133-61029152 Msa0692470:intron 30.0%
! ATTAAGAGTCTTGTGTTCAA+AGG + chr4_4:61029200-61029219 Msa0692470:intron 30.0%
! AATGGTGAACTCACAATTTT+TGG - chr4_4:61029491-61029510 None:intergenic 30.0%
ACTATAAACAAAAAGGGGAA+GGG - chr4_4:61029521-61029540 None:intergenic 30.0%
TACTATAAACAAAAAGGGGA+AGG - chr4_4:61029522-61029541 None:intergenic 30.0%
TTAGGATGAAGAAATGCATA+AGG - chr4_4:61029691-61029710 None:intergenic 30.0%
TTGCTTGATATGCATCAAAA+TGG + chr4_4:61030081-61030100 Msa0692470:CDS 30.0%
AATCATTGTAGACAAACCAA+AGG + chr4_4:61030182-61030201 Msa0692470:CDS 30.0%
! ATGATTTTGTAGGAAACCAT+GGG + chr4_4:61030417-61030436 Msa0692470:three_prime_UTR 30.0%
!! CTATTTTTCTTTTTTCCCCA+TGG - chr4_4:61030436-61030455 Msa0692480:three_prime_UTR 30.0%
CATGGGGAAAAAAGAAAAAT+AGG + chr4_4:61030434-61030453 Msa0692470:three_prime_UTR 30.0%
ACAACTATACTGAATTTGGT+GGG - chr4_4:61030522-61030541 Msa0692480:three_prime_UTR 30.0%
TACAACTATACTGAATTTGG+TGG - chr4_4:61030523-61030542 Msa0692480:three_prime_UTR 30.0%
GTTCATTCTCTATGTAATCA+CGG + chr4_4:61030591-61030610 Msa0692470:three_prime_UTR 30.0%
!! GTAATGGGTTGTAATAATTG+TGG + chr4_4:61030708-61030727 Msa0692470:three_prime_UTR 30.0%
! CATTCAATCAACCTTTAAAG+GGG - chr4_4:61030758-61030777 Msa0692480:three_prime_UTR 30.0%
GCATTCAATCAACCTTTAAA+GGG - chr4_4:61030759-61030778 Msa0692480:three_prime_UTR 30.0%
TGCATTCAATCAACCTTTAA+AGG - chr4_4:61030760-61030779 Msa0692480:three_prime_UTR 30.0%
AACAACAGTATGTCATTAAC+TGG + chr4_4:61030854-61030873 Msa0692470:three_prime_UTR 30.0%
CAAAATACTTCTAATCTTGC+AGG - chr4_4:61030891-61030910 Msa0692480:exon 30.0%
TGGAATATTATCAAGAAAGG+AGG - chr4_4:61030966-61030985 Msa0692480:CDS 30.0%
! TTGCATTTTACGTAGTACAT+GGG - chr4_4:61031188-61031207 Msa0692480:intron 30.0%
! ATTGCATTTTACGTAGTACA+TGG - chr4_4:61031189-61031208 Msa0692480:intron 30.0%
TATTCTCATTACCATCATGT+TGG + chr4_4:61031311-61031330 Msa0692470:intron 30.0%
! TGATTCCAATAAGAAAGCAT+CGG + chr4_4:61031487-61031506 Msa0692470:three_prime_UTR 30.0%
TCTACTTTGTCGTCAAAAAA+AGG + chr4_4:61031620-61031639 Msa0692470:three_prime_UTR 30.0%
CTACTTTGTCGTCAAAAAAA+GGG + chr4_4:61031621-61031640 Msa0692470:three_prime_UTR 30.0%
! TTTTCATGCTTCTCAATTCT+TGG - chr4_4:61031805-61031824 Msa0692480:intron 30.0%
! ATGCTTCTTTTTCCTTGATA+TGG + chr4_4:61031923-61031942 Msa0692470:three_prime_UTR 30.0%
AATTGTGTGCATGGATTCAA+AGG - chr4_4:61025842-61025861 None:intergenic 35.0%
TCGGAGAAAAATCACAAAGA+AGG - chr4_4:61025988-61026007 None:intergenic 35.0%
TCCTTTCTTTCCATTCTCAT+TGG + chr4_4:61026013-61026032 Msa0692470:five_prime_UTR 35.0%
TCCAATGAGAATGGAAAGAA+AGG - chr4_4:61026017-61026036 None:intergenic 35.0%
TTGAAGAGCTTCAAATTCTG+TGG + chr4_4:61026112-61026131 Msa0692470:five_prime_UTR 35.0%
CAAATTCTGTGGACACAATT+TGG + chr4_4:61026123-61026142 Msa0692470:five_prime_UTR 35.0%
! AATTTGAAGCTGGTGATTGA+GGG - chr4_4:61026177-61026196 None:intergenic 35.0%
ACCAGCTTCAAATTCAATTC+TGG + chr4_4:61026183-61026202 Msa0692470:five_prime_UTR 35.0%
CCAGCTTCAAATTCAATTCT+GGG + chr4_4:61026184-61026203 Msa0692470:five_prime_UTR 35.0%
CTTCAAATTCAATTCTGGGT+CGG + chr4_4:61026188-61026207 Msa0692470:five_prime_UTR 35.0%
! AAGTGAATCTCACTGTTTTG+AGG - chr4_4:61026233-61026252 None:intergenic 35.0%
TCACTTTGTTGCAGTGTTTA+AGG + chr4_4:61026247-61026266 Msa0692470:five_prime_UTR 35.0%
TACATTGCAAAGTGACTCTA+TGG - chr4_4:61026290-61026309 None:intergenic 35.0%
! TGAAAAGTGTGTGAAGGTTA+TGG + chr4_4:61026370-61026389 Msa0692470:five_prime_UTR 35.0%
TGAAGTGTGTGACAAAGAAA+TGG + chr4_4:61026407-61026426 Msa0692470:exon 35.0%
AATGGAAGTTAGATCATCAG+AGG + chr4_4:61026425-61026444 Msa0692470:exon 35.0%
ATGGAAGTTAGATCATCAGA+GGG + chr4_4:61026426-61026445 Msa0692470:CDS 35.0%
TGGCATTCCAATTTCTTTAC+TGG + chr4_4:61026591-61026610 Msa0692470:CDS 35.0%
AATATAACATCTCCTTGAGG+AGG - chr4_4:61026651-61026670 None:intergenic 35.0%
GCAAATATAACATCTCCTTG+AGG - chr4_4:61026654-61026673 None:intergenic 35.0%
! TAACTTGCAGGAAGTAGAAT+GGG - chr4_4:61026687-61026706 None:intergenic 35.0%
ATCATGCTTAGCTGAATGTT+GGG + chr4_4:61027066-61027085 Msa0692470:intron 35.0%
! GTATGTGTTGATAAACCCTT+TGG + chr4_4:61027096-61027115 Msa0692470:intron 35.0%
GTAGATTTGTGTGAAGAAAC+AGG + chr4_4:61027166-61027185 Msa0692470:intron 35.0%
ATTTGTGTGAAGAAACAGGT+AGG + chr4_4:61027170-61027189 Msa0692470:intron 35.0%
GGAAGTCCAAAAAAACATGA+TGG - chr4_4:61027247-61027266 None:intergenic 35.0%
!! ATTTGCTTTGTTGCGTTTTG+TGG + chr4_4:61027278-61027297 Msa0692470:intron 35.0%
GGGGTACACTAAAAAGATTA+GGG - chr4_4:61027414-61027433 None:intergenic 35.0%
TGGGGTACACTAAAAAGATT+AGG - chr4_4:61027415-61027434 None:intergenic 35.0%
TTTAGTGTACCCCAAAAAAG+TGG + chr4_4:61027421-61027440 Msa0692470:intron 35.0%
!!! TAAGTGGATCCACTTTTTTG+GGG - chr4_4:61027433-61027452 None:intergenic 35.0%
ATTTGCTTTCTGTTAAGTGC+TGG - chr4_4:61027639-61027658 None:intergenic 35.0%
! TACTTATACGTAGATGGGTT+TGG + chr4_4:61027761-61027780 Msa0692470:intron 35.0%
! TAAAGAAGTGGTGGAAGAAT+AGG - chr4_4:61027953-61027972 None:intergenic 35.0%
! CAAATCTGAAATGCCAAATC+TGG - chr4_4:61028010-61028029 None:intergenic 35.0%
GAGTTCCCAAAAAGTTTACT+AGG + chr4_4:61028272-61028291 Msa0692470:CDS 35.0%
! TTTTCATTTGACCAGCTAAC+AGG - chr4_4:61028328-61028347 None:intergenic 35.0%
!! TGAAAAGTATTACTTGGAGC+AGG + chr4_4:61028342-61028361 Msa0692470:CDS 35.0%
TACTGAAAATAAGGGAAGAG+GGG - chr4_4:61028705-61028724 None:intergenic 35.0%
CTACTGAAAATAAGGGAAGA+GGG - chr4_4:61028706-61028725 None:intergenic 35.0%
ACTACTGAAAATAAGGGAAG+AGG - chr4_4:61028707-61028726 None:intergenic 35.0%
TAAGTGCCTGGTAATTAACA+CGG - chr4_4:61028867-61028886 None:intergenic 35.0%
! ATTGCATCTGAGATATGAGA+TGG + chr4_4:61028960-61028979 Msa0692470:CDS 35.0%
GTAATGATCTGACAAATGAG+AGG + chr4_4:61029228-61029247 Msa0692470:intron 35.0%
AGGAAATAGTGTCTGAAGAA+AGG + chr4_4:61029318-61029337 Msa0692470:CDS 35.0%
!! AATCCAAGTGCTGAAAAATG+GGG - chr4_4:61029632-61029651 None:intergenic 35.0%
!! CAATCCAAGTGCTGAAAAAT+GGG - chr4_4:61029633-61029652 None:intergenic 35.0%
!! TCAATCCAAGTGCTGAAAAA+TGG - chr4_4:61029634-61029653 None:intergenic 35.0%
GCATTTCTTCATCCTAATCA+TGG + chr4_4:61029694-61029713 Msa0692470:intron 35.0%
AACAAGCAGTAACCATGATT+AGG - chr4_4:61029709-61029728 None:intergenic 35.0%
! CCATCTGTGATGAATGATTT+TGG - chr4_4:61029805-61029824 None:intergenic 35.0%
CCAAAATCATTCATCACAGA+TGG + chr4_4:61029802-61029821 Msa0692470:CDS 35.0%
! TGCTTTGGATTTCATGGTTT+CGG + chr4_4:61029826-61029845 Msa0692470:CDS 35.0%
ACCTTTATTCCTACCTATGA+TGG + chr4_4:61029860-61029879 Msa0692470:CDS 35.0%
CCTTTATTCCTACCTATGAT+GGG + chr4_4:61029861-61029880 Msa0692470:CDS 35.0%
! TATCTTATTAGCTCTCATGC+AGG + chr4_4:61030007-61030026 Msa0692470:intron 35.0%
AAAAGTCCATCTTATTGGAC+CGG + chr4_4:61030043-61030062 Msa0692470:CDS 35.0%
TACAAACTCATTCCATGGAA+GGG - chr4_4:61030109-61030128 Msa0692480:three_prime_UTR 35.0%
ACAATGATTCGACGATAAGT+CGG - chr4_4:61030171-61030190 Msa0692480:three_prime_UTR 35.0%
TAGAAATAATCCTCCTCCTT+TGG - chr4_4:61030201-61030220 Msa0692480:three_prime_UTR 35.0%
!! ACAAAGTGTGATGATTTGCT+AGG + chr4_4:61030252-61030271 Msa0692470:CDS 35.0%
! CTTACTTGAGTAGAGTTTTG+AGG - chr4_4:61030279-61030298 Msa0692480:three_prime_UTR 35.0%
AGATTGCTCTTGCATACTTA+TGG - chr4_4:61030348-61030367 Msa0692480:three_prime_UTR 35.0%
ATGCAAGAGCAATCTGAAAA+TGG + chr4_4:61030353-61030372 Msa0692470:three_prime_UTR 35.0%
! CATGATTTTGTAGGAAACCA+TGG + chr4_4:61030416-61030435 Msa0692470:three_prime_UTR 35.0%
! TGATTTTGTAGGAAACCATG+GGG + chr4_4:61030418-61030437 Msa0692470:three_prime_UTR 35.0%
TTTGGTGGGGGAAAAAATAA+GGG - chr4_4:61030508-61030527 Msa0692480:three_prime_UTR 35.0%
! ATTTGGTGGGGGAAAAAATA+AGG - chr4_4:61030509-61030528 Msa0692480:three_prime_UTR 35.0%
! AACTATACTGAATTTGGTGG+GGG - chr4_4:61030520-61030539 Msa0692480:three_prime_UTR 35.0%
! CAACTATACTGAATTTGGTG+GGG - chr4_4:61030521-61030540 Msa0692480:three_prime_UTR 35.0%
GGATGAAAAAACTGAACACT+TGG - chr4_4:61030822-61030841 Msa0692480:three_prime_UTR 35.0%
! ACTGTTGTTTGTATCTCTTG+AGG - chr4_4:61030843-61030862 Msa0692480:three_prime_UTR 35.0%
AAGAGGCAAATCTAGATTCA+AGG - chr4_4:61031083-61031102 Msa0692480:CDS 35.0%
GAACAAAGCATACAAATTGC+AGG - chr4_4:61031118-61031137 Msa0692480:intron 35.0%
GTACTACGTAAAATGCAATG+AGG + chr4_4:61031190-61031209 Msa0692470:intron 35.0%
TTATCACACAACCATTGAAC+AGG - chr4_4:61031360-61031379 Msa0692480:CDS 35.0%
ATACTAGCTCCTCATTATCA+CGG + chr4_4:61031420-61031439 Msa0692470:three_prime_UTR 35.0%
! ATCTGAGATTAGTAGCACTA+GGG - chr4_4:61031517-61031536 Msa0692480:CDS 35.0%
! TATCTGAGATTAGTAGCACT+AGG - chr4_4:61031518-61031537 Msa0692480:CDS 35.0%
! AGTGCTACTAATCTCAGATA+TGG + chr4_4:61031518-61031537 Msa0692470:three_prime_UTR 35.0%
TATGCATATCGATCTGCATT+TGG + chr4_4:61031674-61031693 Msa0692470:three_prime_UTR 35.0%
AAACAAAAGCAATGCAGAGT+TGG - chr4_4:61031723-61031742 Msa0692480:CDS 35.0%
!!! CAGTTGGTAACTTTTACTGT+AGG - chr4_4:61031765-61031784 Msa0692480:intron 35.0%
GATCATGCTTATGAAGTCAA+AGG - chr4_4:61032176-61032195 Msa0692480:CDS 35.0%
GTAGATGAATTGAGAGATCC+AGG - chr4_4:61025814-61025833 None:intergenic 40.0%
GTGCATGGATTCAAAGGTTT+GGG - chr4_4:61025836-61025855 None:intergenic 40.0%
TGTGCATGGATTCAAAGGTT+TGG - chr4_4:61025837-61025856 None:intergenic 40.0%
ATTCTGTGGACACAATTTGG+TGG + chr4_4:61026126-61026145 Msa0692470:five_prime_UTR 40.0%
! GAATTTGAAGCTGGTGATTG+AGG - chr4_4:61026178-61026197 None:intergenic 40.0%
! CCCAGAATTGAATTTGAAGC+TGG - chr4_4:61026187-61026206 None:intergenic 40.0%
TGCAAAGTGACTCTATGGAA+AGG - chr4_4:61026285-61026304 None:intergenic 40.0%
CAATGTACTTCTTACGTACG+AGG + chr4_4:61026303-61026322 Msa0692470:intron 40.0%
! TGGTTGTGAAAAGTGTGTGA+AGG + chr4_4:61026364-61026383 Msa0692470:five_prime_UTR 40.0%
! TGAAGGTTATGGTGATGAAG+TGG + chr4_4:61026381-61026400 Msa0692470:five_prime_UTR 40.0%
TTTGTTCAACCATTGTGCTG+TGG + chr4_4:61026532-61026551 Msa0692470:CDS 40.0%
TTGTGACTGTGAGTGAACTA+TGG + chr4_4:61026571-61026590 Msa0692470:CDS 40.0%
! CTAACTTGCAGGAAGTAGAA+TGG - chr4_4:61026688-61026707 None:intergenic 40.0%
!!! AGTGGTTTTGTGATGTGGTT+TGG + chr4_4:61026758-61026777 Msa0692470:intron 40.0%
GGTTTGGAAATGTGTAGCTT+TGG + chr4_4:61026774-61026793 Msa0692470:intron 40.0%
GATCATGCTTAGCTGAATGT+TGG + chr4_4:61027065-61027084 Msa0692470:intron 40.0%
TCATGCTTAGCTGAATGTTG+GGG + chr4_4:61027067-61027086 Msa0692470:intron 40.0%
!! ATAACAGCCAAGTACTGAGT+AGG + chr4_4:61027309-61027328 Msa0692470:intron 40.0%
!! TAACAGCCAAGTACTGAGTA+GGG + chr4_4:61027310-61027329 Msa0692470:intron 40.0%
ATCTATCCCTACTCAGTACT+TGG - chr4_4:61027319-61027338 None:intergenic 40.0%
CTCATACAGGGTCATTGAAA+TGG - chr4_4:61027586-61027605 None:intergenic 40.0%
!! TAAGTGCTGGAGAGATTGAT+GGG - chr4_4:61027626-61027645 None:intergenic 40.0%
!! TTAAGTGCTGGAGAGATTGA+TGG - chr4_4:61027627-61027646 None:intergenic 40.0%
!! TTTCTAAGAGTGTCCTGCAA+TGG + chr4_4:61027892-61027911 Msa0692470:CDS 40.0%
!! TTCTAAGAGTGTCCTGCAAT+GGG + chr4_4:61027893-61027912 Msa0692470:CDS 40.0%
TTTGAATCAAATGCGTGCAG+CGG + chr4_4:61027918-61027937 Msa0692470:CDS 40.0%
GGCATTTCAGATTTGTGACA+TGG + chr4_4:61028015-61028034 Msa0692470:intron 40.0%
TACGTAGCTTAACCCAAAGT+TGG + chr4_4:61028625-61028644 Msa0692470:intron 40.0%
!! TGCTTTTTGGCACCAACTTT+GGG - chr4_4:61028640-61028659 None:intergenic 40.0%
TAAGGGAAGAGGGGAAATAT+AGG - chr4_4:61028696-61028715 None:intergenic 40.0%
ACCTTGTGTTTGGCAAAAAG+CGG - chr4_4:61028772-61028791 None:intergenic 40.0%
TTGGGAGACCATTATTTGCT+AGG - chr4_4:61028822-61028841 None:intergenic 40.0%
ACCCCTCAAATTGAGAATCT+GGG + chr4_4:61028892-61028911 Msa0692470:CDS 40.0%
TCAGATATGCATTCCCTTCA+TGG + chr4_4:61029288-61029307 Msa0692470:intron 40.0%
TTTCCTTCTCTCTCCATGAA+GGG - chr4_4:61029304-61029323 None:intergenic 40.0%
ATTTCCTTCTCTCTCCATGA+AGG - chr4_4:61029305-61029324 None:intergenic 40.0%
CAATGTAAATCTGTGTCTCC+CGG - chr4_4:61029412-61029431 None:intergenic 40.0%
ACACAGATTTACATTGCAGC+CGG + chr4_4:61029416-61029435 Msa0692470:CDS 40.0%
TTCACCACCATAAATCTCAC+CGG - chr4_4:61029438-61029457 None:intergenic 40.0%
AAGGGGAAGGGAGATATAAA+TGG - chr4_4:61029509-61029528 None:intergenic 40.0%
CACAAGCTAGAATCATTCAG+TGG - chr4_4:61029574-61029593 None:intergenic 40.0%
AGCACTTGGATTGAAAGTTG+TGG + chr4_4:61029640-61029659 Msa0692470:intron 40.0%
!! GAAAGTTGTGGCTCTGAAAA+TGG + chr4_4:61029652-61029671 Msa0692470:intron 40.0%
GAACTGCTGTAACTCATCAA+GGG - chr4_4:61029783-61029802 None:intergenic 40.0%
CCCATCATAGGTAGGAATAA+AGG - chr4_4:61029864-61029883 None:intergenic 40.0%
! TTTTGCCATGTTCCCATCAT+AGG - chr4_4:61029876-61029895 None:intergenic 40.0%
AACATGGCAAAACTTGTGGA+AGG + chr4_4:61029884-61029903 Msa0692470:CDS 40.0%
CGTGAGTAAATAGATACCTG+CGG - chr4_4:61029913-61029932 None:intergenic 40.0%
! GCAATTGTACAAGCCTTTTC+CGG - chr4_4:61030065-61030084 Msa0692480:three_prime_UTR 40.0%
ATCAAAATGGAACCCTTCCA+TGG + chr4_4:61030094-61030113 Msa0692470:CDS 40.0%
CTACAAACTCATTCCATGGA+AGG - chr4_4:61030110-61030129 Msa0692480:three_prime_UTR 40.0%
GCATCTACAAACTCATTCCA+TGG - chr4_4:61030114-61030133 Msa0692480:three_prime_UTR 40.0%
ACAGGTTCACGAAAAGAGAA+TGG + chr4_4:61030140-61030159 Msa0692470:CDS 40.0%
CAGGTTCACGAAAAGAGAAT+GGG + chr4_4:61030141-61030160 Msa0692470:CDS 40.0%
CATTGTAGACAAACCAAAGG+AGG + chr4_4:61030185-61030204 Msa0692470:CDS 40.0%
GCTCTTGCATACTTATGGTT+GGG - chr4_4:61030343-61030362 Msa0692480:three_prime_UTR 40.0%
TGCTCTTGCATACTTATGGT+TGG - chr4_4:61030344-61030363 Msa0692480:three_prime_UTR 40.0%
CATCTTTGCAAGCCTCTATA+TGG - chr4_4:61030471-61030490 Msa0692480:three_prime_UTR 40.0%
! TTTTCCACTTTACAAGCTGC+AGG + chr4_4:61030682-61030701 Msa0692470:three_prime_UTR 40.0%
TGGGTTGTAATAATTGTGGC+CGG + chr4_4:61030712-61030731 Msa0692470:three_prime_UTR 40.0%
! CCATGATCAAGTTTTTGACC+CGG - chr4_4:61030734-61030753 Msa0692480:three_prime_UTR 40.0%
TTGATCATGGTCCCCTTTAA+AGG + chr4_4:61030744-61030763 Msa0692470:three_prime_UTR 40.0%
ATCGCAAATGTAGCCTTCTA+CGG - chr4_4:61030796-61030815 Msa0692480:three_prime_UTR 40.0%
! AGTATTTTGCAAGGTCTCCA+AGG + chr4_4:61030902-61030921 Msa0692470:three_prime_UTR 40.0%
TTATCAAGAAAGGAGGCTCA+AGG - chr4_4:61030959-61030978 Msa0692480:CDS 40.0%
AGAATTGGAACTAGACCAGT+TGG - chr4_4:61030986-61031005 Msa0692480:CDS 40.0%
GATCTTCGAGCAGAAAGAAT+TGG - chr4_4:61031001-61031020 Msa0692480:CDS 40.0%
AAGGGGAAAAAATGATCCTG+CGG - chr4_4:61031035-61031054 Msa0692480:CDS 40.0%
TAGCAGTCGGAATAAGAGAA+GGG - chr4_4:61031053-61031072 Msa0692480:CDS 40.0%
ATAGCAGTCGGAATAAGAGA+AGG - chr4_4:61031054-61031073 Msa0692480:CDS 40.0%
! TCTGAGATTAGTAGCACTAG+GGG - chr4_4:61031516-61031535 Msa0692480:CDS 40.0%
TGCTGTCTGAGAAAAACCAT+TGG + chr4_4:61031586-61031605 Msa0692470:three_prime_UTR 40.0%
GTCAAAAAAAGGGTCTGACT+CGG + chr4_4:61031631-61031650 Msa0692470:three_prime_UTR 40.0%
TATGCATACACCTTGACACT+GGG - chr4_4:61031662-61031681 Msa0692480:CDS 40.0%
ATATGCATACACCTTGACAC+TGG - chr4_4:61031663-61031682 Msa0692480:CDS 40.0%
CACATTCATAACTGTGCAGT+TGG - chr4_4:61031781-61031800 Msa0692480:intron 40.0%
! GCAATCCAAGCTGTATTTTG+AGG - chr4_4:61031854-61031873 Msa0692480:intron 40.0%
AAAGTTCTGCTGCAACTTTC+TGG + chr4_4:61031874-61031893 Msa0692470:three_prime_UTR 40.0%
!! CTTTCTGGCTCTGATACATT+TGG + chr4_4:61031889-61031908 Msa0692470:three_prime_UTR 40.0%
TTTCCTTGATATGGAAGAGC+TGG + chr4_4:61031932-61031951 Msa0692470:three_prime_UTR 40.0%
ATGATCATCTGTAGTCACTC+TGG + chr4_4:61032190-61032209 Msa0692470:three_prime_UTR 40.0%
AGGTGAGGATCCAATGAGAA+TGG - chr4_4:61026026-61026045 None:intergenic 45.0%
AGGAATTGAGGAACAAGGTG+AGG - chr4_4:61026041-61026060 None:intergenic 45.0%
AAGCTGCTCCTTTGATTCCA+AGG + chr4_4:61026481-61026500 Msa0692470:CDS 45.0%
AAACGGCTCCTTGGAATCAA+AGG - chr4_4:61026492-61026511 None:intergenic 45.0%
CAAACATGTCCACAGCACAA+TGG - chr4_4:61026544-61026563 None:intergenic 45.0%
CATTGTGCTGTGGACATGTT+TGG + chr4_4:61026542-61026561 Msa0692470:CDS 45.0%
!!! GCTTGAGTGGTTTTGTGATG+TGG + chr4_4:61026753-61026772 Msa0692470:intron 45.0%
GTACAGTGGAGAATCTGGAT+GGG - chr4_4:61027482-61027501 None:intergenic 45.0%
TGTACAGTGGAGAATCTGGA+TGG - chr4_4:61027483-61027502 None:intergenic 45.0%
GAGTTGTACAGTGGAGAATC+TGG - chr4_4:61027487-61027506 None:intergenic 45.0%
CAGCTAAAGGAGTTGTACAG+TGG - chr4_4:61027496-61027515 None:intergenic 45.0%
!! AAGTGCTGGAGAGATTGATG+GGG - chr4_4:61027625-61027644 None:intergenic 45.0%
! ACGTAGATGGGTTTGGTAGA+CGG + chr4_4:61027768-61027787 Msa0692470:intron 45.0%
CTGCAAGATTTCAGCTGACA+AGG - chr4_4:61027852-61027871 None:intergenic 45.0%
CTTGTCAGCTGAAATCTTGC+AGG + chr4_4:61027850-61027869 Msa0692470:intron 45.0%
!! TCTAAGAGTGTCCTGCAATG+GGG + chr4_4:61027894-61027913 Msa0692470:CDS 45.0%
TTGATTCAAACCCCCATTGC+AGG - chr4_4:61027908-61027927 None:intergenic 45.0%
GTGACATGGTGACAATTGCT+CGG + chr4_4:61028029-61028048 Msa0692470:CDS 45.0%
! TCGGCTTTTGAACCTCACAT+TGG + chr4_4:61028048-61028067 Msa0692470:CDS 45.0%
! GAACCTCACATTGGTTGTTC+CGG + chr4_4:61028057-61028076 Msa0692470:CDS 45.0%
TCATTTGACCAGCTAACAGG+AGG - chr4_4:61028325-61028344 None:intergenic 45.0%
!! GTGCTTTTTGGCACCAACTT+TGG - chr4_4:61028641-61028660 None:intergenic 45.0%
!!! ACCGCTTTTTGCCAAACACA+AGG + chr4_4:61028768-61028787 Msa0692470:CDS 45.0%
! GCTTTTTGCCAAACACAAGG+TGG + chr4_4:61028771-61028790 Msa0692470:CDS 45.0%
GATGCACGCCTAGCAAATAA+TGG + chr4_4:61028811-61028830 Msa0692470:CDS 45.0%
! TAGGTGCCGTGTTAATTACC+AGG + chr4_4:61028858-61028877 Msa0692470:CDS 45.0%
CACCCCTCAAATTGAGAATC+TGG + chr4_4:61028891-61028910 Msa0692470:CDS 45.0%
CCCCAGATTCTCAATTTGAG+GGG - chr4_4:61028896-61028915 None:intergenic 45.0%
CCCCTCAAATTGAGAATCTG+GGG + chr4_4:61028893-61028912 Msa0692470:CDS 45.0%
GCCCCAGATTCTCAATTTGA+GGG - chr4_4:61028897-61028916 None:intergenic 45.0%
TGCCCCAGATTCTCAATTTG+AGG - chr4_4:61028898-61028917 None:intergenic 45.0%
TGATTCAGATACTTCGCGAG+AGG + chr4_4:61028923-61028942 Msa0692470:CDS 45.0%
GATTCAGATACTTCGCGAGA+GGG + chr4_4:61028924-61028943 Msa0692470:CDS 45.0%
ATTCAGATACTTCGCGAGAG+GGG + chr4_4:61028925-61028944 Msa0692470:CDS 45.0%
CTCAGATGCAATGCCACAAA+AGG - chr4_4:61028952-61028971 None:intergenic 45.0%
GAGATATGAGATGGACATGC+TGG + chr4_4:61028969-61028988 Msa0692470:CDS 45.0%
! GCTTTCTCAGGTTGTACTCT+TGG + chr4_4:61028991-61029010 Msa0692470:CDS 45.0%
TTGCACTAATGAAGAAGCCG+AGG + chr4_4:61029014-61029033 Msa0692470:CDS 45.0%
ATTCCCTTCATGGAGAGAGA+AGG + chr4_4:61029298-61029317 Msa0692470:CDS 45.0%
TCTGAAGAAAGGAGATCCCA+GGG + chr4_4:61029329-61029348 Msa0692470:CDS 45.0%
TGTCAAAGGACATAGACCCT+GGG - chr4_4:61029348-61029367 None:intergenic 45.0%
ACCTAAGGCTTGCATAACCA+AGG - chr4_4:61029384-61029403 None:intergenic 45.0%
!! TGCAAGCCTTAGGTTTTGAC+CGG + chr4_4:61029390-61029409 Msa0692470:CDS 45.0%
ATTGCAGCCGGTGAGATTTA+TGG + chr4_4:61029428-61029447 Msa0692470:CDS 45.0%
!! GTTGTGGCTCTGAAAATGGT+TGG + chr4_4:61029656-61029675 Msa0692470:intron 45.0%
GGAACTGCTGTAACTCATCA+AGG - chr4_4:61029784-61029803 None:intergenic 45.0%
TTCATCACAGATGGCTGCTT+TGG + chr4_4:61029811-61029830 Msa0692470:CDS 45.0%
! GATGGCTGCTTTGGATTTCA+TGG + chr4_4:61029820-61029839 Msa0692470:CDS 45.0%
GATTTCATGGTTTCGGTAGC+CGG + chr4_4:61029833-61029852 Msa0692470:CDS 45.0%
!! GGTAGGAATAAAGGTGTCAC+CGG - chr4_4:61029855-61029874 None:intergenic 45.0%
! TCCTACCTATGATGGGAACA+TGG + chr4_4:61029868-61029887 Msa0692470:CDS 45.0%
TGGGAACATGGCAAAACTTG+TGG + chr4_4:61029880-61029899 Msa0692470:CDS 45.0%
GAGTAAATAGATACCTGCGG+TGG - chr4_4:61029910-61029929 None:intergenic 45.0%
TAGCTCTCATGCAGGTATTC+CGG + chr4_4:61030015-61030034 Msa0692470:intron 45.0%
! CCTTTTCCGGTCCAATAAGA+TGG - chr4_4:61030052-61030071 Msa0692480:three_prime_UTR 45.0%
CCATCTTATTGGACCGGAAA+AGG + chr4_4:61030049-61030068 Msa0692470:CDS 45.0%
TGTAGACAAACCAAAGGAGG+AGG + chr4_4:61030188-61030207 Msa0692470:CDS 45.0%
CACACTTTGTTCCCTCACAA+AGG - chr4_4:61030242-61030261 Msa0692480:three_prime_UTR 45.0%
! CTCTAAGAACTTATGCCCGA+GGG - chr4_4:61030385-61030404 Msa0692480:three_prime_UTR 45.0%
! TCTCTAAGAACTTATGCCCG+AGG - chr4_4:61030386-61030405 Msa0692480:three_prime_UTR 45.0%
TACAAGCTGCAGGCATGTAA+TGG + chr4_4:61030692-61030711 Msa0692470:three_prime_UTR 45.0%
ACAAGCTGCAGGCATGTAAT+GGG + chr4_4:61030693-61030712 Msa0692470:three_prime_UTR 45.0%
GGGTTGTAATAATTGTGGCC+GGG + chr4_4:61030713-61030732 Msa0692470:three_prime_UTR 45.0%
CCGGGTCAAAAACTTGATCA+TGG + chr4_4:61030731-61030750 Msa0692470:three_prime_UTR 45.0%
CTCAAGGATCTTGGACTTTG+CGG - chr4_4:61030943-61030962 Msa0692480:CDS 45.0%
AGATCTCATCAATTTGCCGC+AGG + chr4_4:61031016-61031035 Msa0692470:three_prime_UTR 45.0%
AGCAGTCGGAATAAGAGAAG+GGG - chr4_4:61031052-61031071 Msa0692480:CDS 45.0%
TCAAGGCTTGCAATAGCAGT+CGG - chr4_4:61031066-61031085 Msa0692480:CDS 45.0%
CATTCAGGGTTCCAACATGA+TGG - chr4_4:61031325-61031344 Msa0692480:intron 45.0%
TGGTTGTGTGATAACCAGCA+AGG + chr4_4:61031366-61031385 Msa0692470:three_prime_UTR 45.0%
GGTTGTGTGATAACCAGCAA+GGG + chr4_4:61031367-61031386 Msa0692470:three_prime_UTR 45.0%
TGAGGAGCTAGTATGCAAAG+CGG - chr4_4:61031414-61031433 Msa0692480:CDS 45.0%
TCCTCATTATCACGGCTCAT+GGG + chr4_4:61031428-61031447 Msa0692470:three_prime_UTR 45.0%
ACTGTTCAGAGACTCCATCT+GGG - chr4_4:61031468-61031487 Msa0692480:CDS 45.0%
!! GGGTACCGATGCTTTCTTAT+TGG - chr4_4:61031495-61031514 Msa0692480:CDS 45.0%
CTGAGATTAGTAGCACTAGG+GGG - chr4_4:61031515-61031534 Msa0692480:CDS 45.0%
!! AGATATGGAAGCATCCCTTC+TGG + chr4_4:61031533-61031552 Msa0692470:three_prime_UTR 45.0%
ATGCATACACCTTGACACTG+GGG - chr4_4:61031661-61031680 Msa0692480:CDS 45.0%
TTGCGCCTCAAAATACAGCT+TGG + chr4_4:61031846-61031865 Msa0692470:three_prime_UTR 45.0%
TAGCCAGCTCTTCCATATCA+AGG - chr4_4:61031938-61031957 Msa0692480:intron 45.0%
ATACATCCATGTCCATCCGA+GGG - chr4_4:61032010-61032029 Msa0692480:intron 45.0%
AATACATCCATGTCCATCCG+AGG - chr4_4:61032011-61032030 Msa0692480:intron 45.0%
TTCTCCTGCCTTGACAGAAA+GGG + chr4_4:61032103-61032122 Msa0692470:three_prime_UTR 45.0%
GGGATTACCTATTTGCCCTA+AGG - chr4_4:61032133-61032152 Msa0692480:CDS 45.0%
!!! ACCAGCTGGTCTTTTCTCTT+GGG - chr4_4:61032153-61032172 Msa0692480:CDS 45.0%
TATGAAGTCAAAGGACCAGC+TGG - chr4_4:61032167-61032186 Msa0692480:CDS 45.0%
CAAACACGAAAACGGCTCCT+TGG - chr4_4:61026501-61026520 None:intergenic 50.0%
!! CAAGGAGCCGTTTTCGTGTT+TGG + chr4_4:61026499-61026518 Msa0692470:CDS 50.0%
CTTGCAGGAAGTAGAATGGG+AGG - chr4_4:61026684-61026703 None:intergenic 50.0%
! CGTAGATGGGTTTGGTAGAC+GGG + chr4_4:61027769-61027788 Msa0692470:intron 50.0%
! GTAGATGGGTTTGGTAGACG+GGG + chr4_4:61027770-61027789 Msa0692470:intron 50.0%
!! CTAAGAGTGTCCTGCAATGG+GGG + chr4_4:61027895-61027914 Msa0692470:CDS 50.0%
GTTCCGGAACAACCAATGTG+AGG - chr4_4:61028063-61028082 None:intergenic 50.0%
! AATCCTTTTGGGCAGACCGT+AGG + chr4_4:61028092-61028111 Msa0692470:CDS 50.0%
ATACCTACGGTCTGCCCAAA+AGG - chr4_4:61028098-61028117 None:intergenic 50.0%
TTATTCTGGCAGTGGCTTCG+AGG + chr4_4:61028189-61028208 Msa0692470:intron 50.0%
GAAAAGTGGATACTCGACCC+TGG + chr4_4:61028294-61028313 Msa0692470:CDS 50.0%
GAAGTGCACCACCTTGTGTT+TGG - chr4_4:61028782-61028801 None:intergenic 50.0%
GAGGGGTGAATTTAAGTGCC+TGG - chr4_4:61028879-61028898 None:intergenic 50.0%
!! ATGGACATGCTGGCTTTCTC+AGG + chr4_4:61028979-61028998 Msa0692470:CDS 50.0%
AAGAAGCCGAGGATCTCAAG+CGG + chr4_4:61029025-61029044 Msa0692470:CDS 50.0%
GTCTGAAGAAAGGAGATCCC+AGG + chr4_4:61029328-61029347 Msa0692470:CDS 50.0%
GTGTCAAAGGACATAGACCC+TGG - chr4_4:61029349-61029368 None:intergenic 50.0%
GGGTCTATGTCCTTTGACAC+CGG + chr4_4:61029349-61029368 Msa0692470:CDS 50.0%
TCTATGTCCTTTGACACCGG+AGG + chr4_4:61029352-61029371 Msa0692470:CDS 50.0%
ATAACCAAGGCAGTCTCCTC+CGG - chr4_4:61029371-61029390 None:intergenic 50.0%
GCCTTGGTTATGCAAGCCTT+AGG + chr4_4:61029380-61029399 Msa0692470:CDS 50.0%
!! GCAAGCCTTAGGTTTTGACC+GGG + chr4_4:61029391-61029410 Msa0692470:CDS 50.0%
TGTCTCCCGGTCAAAACCTA+AGG - chr4_4:61029399-61029418 None:intergenic 50.0%
!! CCAAGTGCTGAAAAATGGGG+AGG - chr4_4:61029629-61029648 None:intergenic 50.0%
!! CCTCCCCATTTTTCAGCACT+TGG + chr4_4:61029626-61029645 Msa0692470:intron 50.0%
GCCATGTTCCCATCATAGGT+AGG - chr4_4:61029872-61029891 None:intergenic 50.0%
GTTTGTAGATGCTGTGCGAC+AGG + chr4_4:61030122-61030141 Msa0692470:CDS 50.0%
!! ACAAAGGCACTCATGAGGGT+TGG - chr4_4:61030226-61030245 Msa0692480:three_prime_UTR 50.0%
!! CCTCACAAAGGCACTCATGA+GGG - chr4_4:61030230-61030249 Msa0692480:three_prime_UTR 50.0%
CCTCATGAGTGCCTTTGTGA+GGG + chr4_4:61030228-61030247 Msa0692470:CDS 50.0%
CTGAAAATGGCTCCTTCCCT+CGG + chr4_4:61030366-61030385 Msa0692470:three_prime_UTR 50.0%
TGAAAATGGCTCCTTCCCTC+GGG + chr4_4:61030367-61030386 Msa0692470:three_prime_UTR 50.0%
AAGAACTTATGCCCGAGGGA+AGG - chr4_4:61030381-61030400 Msa0692480:three_prime_UTR 50.0%
CATGCCTGCAGCTTGTAAAG+TGG - chr4_4:61030689-61030708 Msa0692480:three_prime_UTR 50.0%
TCACATGCGTTCACCGTAGA+AGG + chr4_4:61030780-61030799 Msa0692470:three_prime_UTR 50.0%
! GGTGAAAGTGGTGATGTCCT+TGG - chr4_4:61030922-61030941 Msa0692480:CDS 50.0%
CTTGGACTTTGCGGTGAAAG+TGG - chr4_4:61030934-61030953 Msa0692480:CDS 50.0%
GAAAGGAGGCTCAAGGATCT+TGG - chr4_4:61030952-61030971 Msa0692480:CDS 50.0%
TGTGTGATAACCAGCAAGGG+CGG + chr4_4:61031370-61031389 Msa0692470:three_prime_UTR 50.0%
CTCCTCATTATCACGGCTCA+TGG + chr4_4:61031427-61031446 Msa0692470:three_prime_UTR 50.0%
CTGTTCAGAGACTCCATCTG+GGG - chr4_4:61031467-61031486 Msa0692480:CDS 50.0%
CACTGTTCAGAGACTCCATC+TGG - chr4_4:61031469-61031488 Msa0692480:CDS 50.0%
! GAAGCATCCCTTCTGGAAGA+GGG + chr4_4:61031540-61031559 Msa0692470:three_prime_UTR 50.0%
ATAACCGCCCTCTTCCAGAA+GGG - chr4_4:61031550-61031569 Msa0692480:CDS 50.0%
TATAACCGCCCTCTTCCAGA+AGG - chr4_4:61031551-61031570 Msa0692480:CDS 50.0%
GTAGACGTTGCTGAGACCAA+TGG - chr4_4:61031605-61031624 Msa0692480:CDS 50.0%
! AAGCAATGCAGAGTTGGCTC+TGG - chr4_4:61031717-61031736 Msa0692480:CDS 50.0%
TACATCCATGTCCATCCGAG+GGG - chr4_4:61032009-61032028 Msa0692480:intron 50.0%
TTCTGTCAAGGCAGGAGAAC+AGG - chr4_4:61032102-61032121 Msa0692480:CDS 50.0%
GTTCTCCTGCCTTGACAGAA+AGG + chr4_4:61032102-61032121 Msa0692470:three_prime_UTR 50.0%
TCTCCTGCCTTGACAGAAAG+GGG + chr4_4:61032104-61032123 Msa0692470:three_prime_UTR 50.0%
TCCCAAGAGAAAAGACCAGC+TGG + chr4_4:61032149-61032168 Msa0692470:three_prime_UTR 50.0%
!!! GACCAGCTGGTCTTTTCTCT+TGG - chr4_4:61032154-61032173 Msa0692480:CDS 50.0%
GAAGCTGGTGATTGAGGGTG+AGG - chr4_4:61026172-61026191 None:intergenic 55.0%
ACAACTCAACGGCCTCCTCA+AGG + chr4_4:61026636-61026655 Msa0692470:CDS 55.0%
!! GCTAACAGGAGGCATCTCCA+GGG - chr4_4:61028314-61028333 None:intergenic 55.0%
!! AGCTAACAGGAGGCATCTCC+AGG - chr4_4:61028315-61028334 None:intergenic 55.0%
TGGAGATGCCTCCTGTTAGC+TGG + chr4_4:61028314-61028333 Msa0692470:CDS 55.0%
CCTCATCCGCTTGAGATCCT+CGG - chr4_4:61029034-61029053 None:intergenic 55.0%
GCAGCCGGTGAGATTTATGG+TGG + chr4_4:61029431-61029450 Msa0692470:CDS 55.0%
CCCTCATGAGTGCCTTTGTG+AGG + chr4_4:61030227-61030246 Msa0692470:CDS 55.0%
!! CCCTCACAAAGGCACTCATG+AGG - chr4_4:61030231-61030250 Msa0692480:three_prime_UTR 55.0%
GCAGGATCGCAAGCTGAAAG+AGG - chr4_4:61031100-61031119 Msa0692480:intron 55.0%
! GCCCATGAGCCGTGATAATG+AGG - chr4_4:61031432-61031451 Msa0692480:CDS 55.0%
CACCTCAAGATGACCCCAGA+TGG + chr4_4:61031451-61031470 Msa0692470:three_prime_UTR 55.0%
! CTCCATCTGGGGTCATCTTG+AGG - chr4_4:61031456-61031475 Msa0692480:CDS 55.0%
!! GGAAGCATCCCTTCTGGAAG+AGG + chr4_4:61031539-61031558 Msa0692470:three_prime_UTR 55.0%
CTCGGATATCCCCAGTGTCA+AGG + chr4_4:61031649-61031668 Msa0692470:three_prime_UTR 55.0%
!! GCAGAGTTGGCTCTGGACTA+TGG - chr4_4:61031710-61031729 Msa0692480:CDS 55.0%
TCCTACCGTCGAAAACCCCT+CGG + chr4_4:61031991-61032010 Msa0692470:intron 55.0%
! TCCATCCGAGGGGTTTTCGA+CGG - chr4_4:61031999-61032018 Msa0692480:intron 55.0%
GAAAACCCCTCGGATGGACA+TGG + chr4_4:61032001-61032020 Msa0692470:intron 55.0%
CTCCTGCCTTGACAGAAAGG+GGG + chr4_4:61032105-61032124 Msa0692470:three_prime_UTR 55.0%
AAGGAGCCCCCTTTCTGTCA+AGG - chr4_4:61032114-61032133 Msa0692480:CDS 55.0%
TGACAGAAAGGGGGCTCCTT+AGG + chr4_4:61032114-61032133 Msa0692470:three_prime_UTR 55.0%
GACAGAAAGGGGGCTCCTTA+GGG + chr4_4:61032115-61032134 Msa0692470:three_prime_UTR 55.0%
CTGTAGTCACTCTGGCACTG+TGG + chr4_4:61032198-61032217 Msa0692470:three_prime_UTR 55.0%
! TCGCGAGAGGGGACCTTTTG+TGG + chr4_4:61028936-61028955 Msa0692470:CDS 60.0%
CCGAGGATCTCAAGCGGATG+AGG + chr4_4:61029031-61029050 Msa0692470:CDS 60.0%
! GCAGTCTCCTCCGGTGTCAA+AGG - chr4_4:61029362-61029381 None:intergenic 60.0%
AACTTGTGGAAGGCCACCGC+AGG + chr4_4:61029894-61029913 Msa0692470:CDS 60.0%
! ACCAGCAAGGGCGGATTTGC+AGG + chr4_4:61031379-61031398 Msa0692470:three_prime_UTR 60.0%
! GCATCCCTTCTGGAAGAGGG+CGG + chr4_4:61031543-61031562 Msa0692470:three_prime_UTR 60.0%
! TCCGAGGGGTTTTCGACGGT+AGG - chr4_4:61031995-61032014 Msa0692480:intron 60.0%
ACCGTCGAAAACCCCTCGGA+TGG + chr4_4:61031995-61032014 Msa0692470:intron 60.0%
AGCCCCCTTTCTGTCAAGGC+AGG - chr4_4:61032110-61032129 Msa0692480:CDS 60.0%
GGGGGCTCCTTAGGGCAAAT+AGG + chr4_4:61032123-61032142 Msa0692470:three_prime_UTR 60.0%
GACACCGGAGGAGACTGCCT+TGG + chr4_4:61029364-61029383 Msa0692470:CDS 65.0%
GCCTGCAAATCCGCCCTTGC+TGG - chr4_4:61031383-61031402 Msa0692480:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 61025626 61032226 61025626 ID=Msa0692470;Name=Msa0692470
chr4_4 mRNA 61025626 61032226 61025626 ID=Msa0692470-mRNA-1;Parent=Msa0692470;Name=Msa0692470-mRNA-1;_AED=0.11;_eAED=0.11;_QI=719|1|1|1|0.7|0.54|11|1553|507
chr4_4 exon 61025626 61026268 61025626 ID=Msa0692470-mRNA-1:exon:16778;Parent=Msa0692470-mRNA-1
chr4_4 exon 61026350 61026702 61026350 ID=Msa0692470-mRNA-1:exon:16779;Parent=Msa0692470-mRNA-1
chr4_4 exon 61027872 61027939 61027872 ID=Msa0692470-mRNA-1:exon:16780;Parent=Msa0692470-mRNA-1
chr4_4 exon 61028025 61028113 61028025 ID=Msa0692470-mRNA-1:exon:16781;Parent=Msa0692470-mRNA-1
chr4_4 exon 61028201 61028363 61028201 ID=Msa0692470-mRNA-1:exon:16782;Parent=Msa0692470-mRNA-1
chr4_4 exon 61028763 61029052 61028763 ID=Msa0692470-mRNA-1:exon:16783;Parent=Msa0692470-mRNA-1
chr4_4 exon 61029292 61029496 61029292 ID=Msa0692470-mRNA-1:exon:16784;Parent=Msa0692470-mRNA-1
chr4_4 exon 61029758 61029915 61029758 ID=Msa0692470-mRNA-1:exon:16785;Parent=Msa0692470-mRNA-1
chr4_4 exon 61030029 61031118 61030029 ID=Msa0692470-mRNA-1:exon:16786;Parent=Msa0692470-mRNA-1
chr4_4 exon 61031361 61031970 61031361 ID=Msa0692470-mRNA-1:exon:16787;Parent=Msa0692470-mRNA-1
chr4_4 exon 61032100 61032226 61032100 ID=Msa0692470-mRNA-1:exon:16788;Parent=Msa0692470-mRNA-1
chr4_4 five_prime_UTR 61025626 61026268 61025626 ID=Msa0692470-mRNA-1:five_prime_utr;Parent=Msa0692470-mRNA-1
chr4_4 five_prime_UTR 61026350 61026425 61026350 ID=Msa0692470-mRNA-1:five_prime_utr;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61026426 61026702 61026426 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61027872 61027939 61027872 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61028025 61028113 61028025 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61028201 61028363 61028201 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61028763 61029052 61028763 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61029292 61029496 61029292 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61029758 61029915 61029758 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 CDS 61030029 61030302 61030029 ID=Msa0692470-mRNA-1:cds;Parent=Msa0692470-mRNA-1
chr4_4 three_prime_UTR 61030303 61031118 61030303 ID=Msa0692470-mRNA-1:three_prime_utr;Parent=Msa0692470-mRNA-1
chr4_4 three_prime_UTR 61031361 61031970 61031361 ID=Msa0692470-mRNA-1:three_prime_utr;Parent=Msa0692470-mRNA-1
chr4_4 three_prime_UTR 61032100 61032226 61032100 ID=Msa0692470-mRNA-1:three_prime_utr;Parent=Msa0692470-mRNA-1
Gene Sequence

>Msa0692470

ATGGAAGTTAGATCATCAGAGGGTAATCAAGTGAGATATTATGATAAGCTTCTTCAAGCTGCTCCTTTGATTCCAAGGAGCCGTTTTCGTGTTTGGTTTATTCGAATTTGTTCAACCATTGTGCTGTGGACATGTTTGGTTCAGCTTGTGACTGTGAGTGAACTATGGCATTCCAATTTCTTTACTGGATTTACTAGTCGTATATATCACACAACTCAACGGCCTCCTCAAGGAGATGTTATATTTGCTCAATCTCCTCCCATTCTACTTCCTGCAAGAAATTATACTAGTAATGGTTTTCTAAGAGTGTCCTGCAATGGGGGTTTGAATCAAATGCGTGCAGCGATTTGTGACATGGTGACAATTGCTCGGCTTTTGAACCTCACATTGGTTGTTCCGGAACTTGATAAGAAATCCTTTTGGGCAGACCGTAGTGGCTTCGAGGATATATTTGATGTAAGACATTTCATTGATTCTTTACGAGATGAAGTTCGAATAGTGAAAAGAGTTCCCAAAAAGTTTACTAGGAAAAGTGGATACTCGACCCTGGAGATGCCTCCTGTTAGCTGGTCAAATGAAAAGTATTACTTGGAGCAGATTCTACCGCTTTTTGCCAAACACAAGGTGGTGCACTTCAACAAAACAGATGCACGCCTAGCAAATAATGGTCTCCCAATTGATCTACAGAAACTTAGGTGCCGTGTTAATTACCAGGCACTTAAATTCACCCCTCAAATTGAGAATCTGGGGCAAAAATTGATTCAGATACTTCGCGAGAGGGGACCTTTTGTGGCATTGCATCTGAGATATGAGATGGACATGCTGGCTTTCTCAGGTTGTACTCTTGGTTGCACTAATGAAGAAGCCGAGGATCTCAAGCGGATGAGATATGCATTCCCTTCATGGAGAGAGAAGGAAATAGTGTCTGAAGAAAGGAGATCCCAGGGTCTATGTCCTTTGACACCGGAGGAGACTGCCTTGGTTATGCAAGCCTTAGGTTTTGACCGGGAGACACAGATTTACATTGCAGCCGGTGAGATTTATGGTGGTGAACGTAGACTTGCGCAACTGAGAGCTGCATTTCCAAAAATTGTTAAAAAAGAGGTATTGGTCGCCCTTGATGAGTTACAGCAGTTCCAAAATCATTCATCACAGATGGCTGCTTTGGATTTCATGGTTTCGGTAGCCGGTGACACCTTTATTCCTACCTATGATGGGAACATGGCAAAACTTGTGGAAGGCCACCGCAGGTATTCCGGTTTTAAAAAGTCCATCTTATTGGACCGGAAAAGGCTTGTACAATTGCTTGATATGCATCAAAATGGAACCCTTCCATGGAATGAGTTTGTAGATGCTGTGCGACAGGTTCACGAAAAGAGAATGGGTCAGCCGACTTATCGTCGAATCATTGTAGACAAACCAAAGGAGGAGGATTATTTCTACGCCAACCCTCATGAGTGCCTTTGTGAGGGAACAAAGTGTGATGATTTGCTAGGTCCTCAAAACTCTACTCAAGTAAGATGA

Protein sequence

>Msa0692470

MEVRSSEGNQVRYYDKLLQAAPLIPRSRFRVWFIRICSTIVLWTCLVQLVTVSELWHSNFFTGFTSRIYHTTQRPPQGDVIFAQSPPILLPARNYTSNGFLRVSCNGGLNQMRAAICDMVTIARLLNLTLVVPELDKKSFWADRSGFEDIFDVRHFIDSLRDEVRIVKRVPKKFTRKSGYSTLEMPPVSWSNEKYYLEQILPLFAKHKVVHFNKTDARLANNGLPIDLQKLRCRVNYQALKFTPQIENLGQKLIQILRERGPFVALHLRYEMDMLAFSGCTLGCTNEEAEDLKRMRYAFPSWREKEIVSEERRSQGLCPLTPEETALVMQALGFDRETQIYIAAGEIYGGERRLAQLRAAFPKIVKKEVLVALDELQQFQNHSSQMAALDFMVSVAGDTFIPTYDGNMAKLVEGHRRYSGFKKSILLDRKRLVQLLDMHQNGTLPWNEFVDAVRQVHEKRMGQPTYRRIIVDKPKEEDYFYANPHECLCEGTKCDDLLGPQNSTQVR*