Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083940 | XP_024626147.1 | 96.721 | 122 | 4 | 0 | 46 | 167 | 340 | 461 | 6.16e-78 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083940 | A0A396H841 | 96.721 | 122 | 4 | 0 | 46 | 167 | 382 | 503 | 3.58e-78 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025340 | Msa1083940 | 0.821662 | 3.583500e-53 | -8.615850e-47 |
| Msa0028450 | Msa1083940 | 0.808487 | 3.022968e-50 | -8.615850e-47 |
| Msa0039590 | Msa1083940 | 0.816813 | 4.555971e-52 | -8.615850e-47 |
| Msa0046090 | Msa1083940 | 0.821883 | 3.186575e-53 | -8.615850e-47 |
| Msa0070580 | Msa1083940 | 0.808129 | 3.604208e-50 | -8.615850e-47 |
| Msa0072710 | Msa1083940 | 0.821070 | 4.908965e-53 | -8.615850e-47 |
| Msa0078080 | Msa1083940 | 0.833971 | 3.925398e-56 | -8.615850e-47 |
| Msa0078170 | Msa1083940 | 0.800581 | 1.347424e-48 | -8.615850e-47 |
| Msa0084550 | Msa1083940 | 0.804058 | 2.591679e-49 | -8.615850e-47 |
| Msa0089470 | Msa1083940 | 0.804985 | 1.660751e-49 | -8.615850e-47 |
| Msa0093830 | Msa1083940 | 0.804784 | 1.829348e-49 | -8.615850e-47 |
| Msa0094240 | Msa1083940 | 0.806931 | 6.470923e-50 | -8.615850e-47 |
| Msa0114960 | Msa1083940 | 0.810007 | 1.427981e-50 | -8.615850e-47 |
| Msa0614060 | Msa1083940 | 0.808069 | 3.712659e-50 | -8.615850e-47 |
| Msa0618260 | Msa1083940 | 0.803373 | 3.596308e-49 | -8.615850e-47 |
| Msa0619530 | Msa1083940 | 0.803132 | 4.032880e-49 | -8.615850e-47 |
| Msa0623350 | Msa1083940 | 0.824340 | 8.512209e-54 | -8.615850e-47 |
| Msa0625850 | Msa1083940 | 0.805557 | 1.260482e-49 | -8.615850e-47 |
| Msa0638550 | Msa1083940 | 0.806260 | 8.967344e-50 | -8.615850e-47 |
| Msa0642150 | Msa1083940 | 0.823648 | 1.236805e-53 | -8.615850e-47 |
| Msa0644610 | Msa1083940 | 0.803758 | 2.991543e-49 | -8.615850e-47 |
| Msa0650860 | Msa1083940 | 0.803620 | 3.196303e-49 | -8.615850e-47 |
| Msa0653370 | Msa1083940 | 0.805750 | 1.148022e-49 | -8.615850e-47 |
| Msa0663630 | Msa1083940 | 0.821772 | 3.380100e-53 | -8.615850e-47 |
| Msa0663650 | Msa1083940 | 0.825396 | 4.796903e-54 | -8.615850e-47 |
| Msa0665040 | Msa1083940 | 0.806103 | 9.678991e-50 | -8.615850e-47 |
| Msa0677590 | Msa1083940 | 0.803820 | 2.905077e-49 | -8.615850e-47 |
| Msa0681100 | Msa1083940 | 0.817018 | 4.098006e-52 | -8.615850e-47 |
| Msa0696600 | Msa1083940 | 0.813959 | 1.965342e-51 | -8.615850e-47 |
| Msa0697230 | Msa1083940 | 0.821043 | 4.979159e-53 | -8.615850e-47 |
| Msa0700930 | Msa1083940 | 0.802079 | 6.650938e-49 | -8.615850e-47 |
| Msa0701460 | Msa1083940 | 0.819279 | 1.262653e-52 | -8.615850e-47 |
| Msa0701530 | Msa1083940 | 0.817014 | 4.107069e-52 | -8.615850e-47 |
| Msa0703620 | Msa1083940 | 0.815870 | 7.408130e-52 | -8.615850e-47 |
| Msa0707270 | Msa1083940 | 0.806419 | 8.300103e-50 | -8.615850e-47 |
| Msa0708450 | Msa1083940 | 0.807270 | 5.485622e-50 | -8.615850e-47 |
| Msa0726000 | Msa1083940 | 0.805428 | 1.341319e-49 | -8.615850e-47 |
| Msa0750490 | Msa1083940 | 0.806761 | 7.030500e-50 | -8.615850e-47 |
| Msa0750940 | Msa1083940 | 0.819590 | 1.072161e-52 | -8.615850e-47 |
| Msa0786330 | Msa1083940 | 0.800779 | 1.228188e-48 | -8.615850e-47 |
| Msa0840450 | Msa1083940 | 0.800711 | 1.267811e-48 | -8.615850e-47 |
| Msa0121080 | Msa1083940 | 0.800476 | 1.415476e-48 | -8.615850e-47 |
| Msa0130620 | Msa1083940 | 0.804109 | 2.528890e-49 | -8.615850e-47 |
| Msa0132920 | Msa1083940 | 0.806776 | 6.981013e-50 | -8.615850e-47 |
| Msa0138340 | Msa1083940 | 0.805075 | 1.590034e-49 | -8.615850e-47 |
| Msa0147960 | Msa1083940 | 0.807572 | 4.734886e-50 | -8.615850e-47 |
| Msa0160080 | Msa1083940 | 0.815971 | 7.032673e-52 | -8.615850e-47 |
| Msa0160470 | Msa1083940 | 0.810090 | 1.369902e-50 | -8.615850e-47 |
| Msa0163400 | Msa1083940 | 0.802362 | 5.815929e-49 | -8.615850e-47 |
| Msa0164580 | Msa1083940 | 0.808051 | 3.744034e-50 | -8.615850e-47 |
| Msa0164630 | Msa1083940 | 0.805029 | 1.625556e-49 | -8.615850e-47 |
| Msa0165820 | Msa1083940 | 0.813509 | 2.468890e-51 | -8.615850e-47 |
| Msa0168470 | Msa1083940 | 0.810766 | 9.791932e-51 | -8.615850e-47 |
| Msa0170690 | Msa1083940 | 0.808107 | 3.643135e-50 | -8.615850e-47 |
| Msa0170730 | Msa1083940 | 0.807339 | 5.304100e-50 | -8.615850e-47 |
| Msa0176530 | Msa1083940 | 0.804821 | 1.796954e-49 | -8.615850e-47 |
| Msa0183490 | Msa1083940 | 0.802269 | 6.079388e-49 | -8.615850e-47 |
| Msa0190400 | Msa1083940 | 0.808304 | 3.308043e-50 | -8.615850e-47 |
| Msa0365350 | Msa1083940 | 0.834905 | 2.287428e-56 | -8.615850e-47 |
| Msa0367310 | Msa1083940 | 0.831361 | 1.744154e-55 | -8.615850e-47 |
| Msa0367600 | Msa1083940 | 0.806893 | 6.592922e-50 | -8.615850e-47 |
| Msa0372550 | Msa1083940 | 0.809935 | 1.479889e-50 | -8.615850e-47 |
| Msa0375570 | Msa1083940 | 0.805461 | 1.320437e-49 | -8.615850e-47 |
| Msa0376480 | Msa1083940 | 0.809121 | 2.212706e-50 | -8.615850e-47 |
| Msa0381990 | Msa1083940 | 0.820607 | 6.274074e-53 | -8.615850e-47 |
| Msa0386390 | Msa1083940 | 0.800726 | 1.258715e-48 | -8.615850e-47 |
| Msa0387120 | Msa1083940 | 0.800625 | 1.320262e-48 | -8.615850e-47 |
| Msa0415200 | Msa1083940 | 0.808413 | 3.134928e-50 | -8.615850e-47 |
| Msa0415210 | Msa1083940 | 0.812787 | 3.556087e-51 | -8.615850e-47 |
| Msa0420280 | Msa1083940 | 0.818049 | 2.401160e-52 | -8.615850e-47 |
| Msa0424220 | Msa1083940 | 0.807614 | 4.637482e-50 | -8.615850e-47 |
| Msa0430040 | Msa1083940 | 0.818595 | 1.805859e-52 | -8.615850e-47 |
| Msa0431310 | Msa1083940 | 0.819708 | 1.007715e-52 | -8.615850e-47 |
| Msa0447830 | Msa1083940 | 0.808253 | 3.391150e-50 | -8.615850e-47 |
| Msa0449030 | Msa1083940 | 0.827314 | 1.675716e-54 | -8.615850e-47 |
| Msa0469840 | Msa1083940 | 0.823926 | 1.064918e-53 | -8.615850e-47 |
| Msa0474220 | Msa1083940 | 0.808319 | 3.283118e-50 | -8.615850e-47 |
| Msa0475080 | Msa1083940 | 0.819479 | 1.136384e-52 | -8.615850e-47 |
| Msa0476490 | Msa1083940 | 0.818178 | 2.244439e-52 | -8.615850e-47 |
| Msa0479790 | Msa1083940 | 0.801126 | 1.042994e-48 | -8.615850e-47 |
| Msa0980980 | Msa1083940 | 0.814705 | 1.344481e-51 | -8.615850e-47 |
| Msa0985570 | Msa1083940 | 0.806432 | 8.251775e-50 | -8.615850e-47 |
| Msa0998940 | Msa1083940 | 0.808368 | 3.205207e-50 | -8.615850e-47 |
| Msa1020160 | Msa1083940 | 0.807811 | 4.211775e-50 | -8.615850e-47 |
| Msa1022660 | Msa1083940 | 0.823279 | 1.508662e-53 | -8.615850e-47 |
| Msa1031620 | Msa1083940 | 0.801650 | 8.147909e-49 | -8.615850e-47 |
| Msa1031650 | Msa1083940 | 0.800314 | 1.527650e-48 | -8.615850e-47 |
| Msa1033460 | Msa1083940 | 0.812312 | 4.517091e-51 | -8.615850e-47 |
| Msa1038040 | Msa1083940 | 0.802235 | 6.176662e-49 | -8.615850e-47 |
| Msa1038230 | Msa1083940 | 0.833796 | 4.339950e-56 | -8.615850e-47 |
| Msa1066930 | Msa1083940 | 0.818344 | 2.058855e-52 | -8.615850e-47 |
| Msa1066980 | Msa1083940 | 0.808158 | 3.552870e-50 | -8.615850e-47 |
| Msa1068110 | Msa1083940 | 0.803519 | 3.353159e-49 | -8.615850e-47 |
| Msa1073140 | Msa1083940 | 0.852808 | 3.620268e-61 | -8.615850e-47 |
| Msa1083850 | Msa1083940 | 0.827946 | 1.181229e-54 | -8.615850e-47 |
| Msa1083940 | Msa1118890 | 0.803031 | 4.232999e-49 | -8.615850e-47 |
| Msa1083940 | Msa1122710 | 0.807188 | 5.710817e-50 | -8.615850e-47 |
| Msa1083940 | Msa1126910 | 0.803930 | 2.755464e-49 | -8.615850e-47 |
| Msa1083940 | Msa1127530 | 0.831000 | 2.139367e-55 | -8.615850e-47 |
| Msa1083940 | Msa1130070 | 0.804037 | 2.618556e-49 | -8.615850e-47 |
| Msa1083940 | Msa1136770 | 0.801759 | 7.738626e-49 | -8.615850e-47 |
| Msa1083940 | Msa1144470 | 0.810107 | 1.358430e-50 | -8.615850e-47 |
| Msa1083940 | Msa1154250 | 0.808268 | 3.366643e-50 | -8.615850e-47 |
| Msa1083940 | Msa1160470 | 0.805943 | 1.045806e-49 | -8.615850e-47 |
| Msa1083940 | Msa1165330 | 0.824430 | 8.107359e-54 | -8.615850e-47 |
| Msa1083940 | Msa1179410 | 0.808989 | 2.361578e-50 | -8.615850e-47 |
| Msa1083940 | Msa1182480 | 0.810099 | 1.363671e-50 | -8.615850e-47 |
| Msa1083940 | Msa1196990 | 0.808661 | 2.776091e-50 | -8.615850e-47 |
| Msa1083940 | Msa1197210 | 0.802649 | 5.076000e-49 | -8.615850e-47 |
| Msa1083940 | Msa1205560 | 0.805853 | 1.092325e-49 | -8.615850e-47 |
| Msa1083940 | Msa1215790 | 0.835809 | 1.351390e-56 | -8.615850e-47 |
| Msa1083940 | Msa1221540 | 0.800769 | 1.233504e-48 | -8.615850e-47 |
| Msa1083940 | Msa1223520 | 0.818795 | 1.626923e-52 | -8.615850e-47 |
| Msa1083940 | Msa1224310 | 0.812639 | 3.831300e-51 | -8.615850e-47 |
| Msa1083940 | Msa1235880 | 0.810218 | 1.285997e-50 | -8.615850e-47 |
| Msa1083940 | Msa1249740 | 0.808786 | 2.609455e-50 | -8.615850e-47 |
| Msa1083940 | Msa1251890 | 0.801940 | 7.102843e-49 | -8.615850e-47 |
| Msa1083940 | Msa1255030 | 0.806459 | 8.142218e-50 | -8.615850e-47 |
| Msa1083940 | Msa1263600 | 0.808520 | 2.974545e-50 | -8.615850e-47 |
| Msa1083940 | Msa1263970 | 0.824822 | 6.553324e-54 | -8.615850e-47 |
| Msa1083940 | Msa1279240 | 0.803223 | 3.861925e-49 | -8.615850e-47 |
| Msa1083940 | Msa1296930 | 0.817771 | 2.773956e-52 | -8.615850e-47 |
| Msa1083940 | Msa1315990 | 0.802340 | 5.876697e-49 | -8.615850e-47 |
| Msa1083940 | Msa1317340 | 0.815520 | 8.862025e-52 | -8.615850e-47 |
| Msa1083940 | Msa1319520 | 0.808539 | 2.946882e-50 | -8.615850e-47 |
| Msa1083940 | Msa1320660 | 0.802343 | 5.870007e-49 | -8.615850e-47 |
| Msa1083940 | Msa1330910 | 0.815312 | 9.861056e-52 | -8.615850e-47 |
| Msa1083940 | Msa1342080 | 0.810894 | 9.187444e-51 | -8.615850e-47 |
| Msa1083940 | Msa1349490 | 0.804699 | 1.905346e-49 | -8.615850e-47 |
| Msa1083940 | Msa1349720 | 0.806313 | 8.740511e-50 | -8.615850e-47 |
| Msa1083940 | Msa1356500 | 0.811037 | 8.554202e-51 | -8.615850e-47 |
| Msa1083940 | Msa1361090 | 0.802841 | 4.633628e-49 | -8.615850e-47 |
| Msa1083940 | Msa1373570 | 0.822557 | 2.222566e-53 | -8.615850e-47 |
| Msa1083940 | Msa1374610 | 0.819201 | 1.315160e-52 | -8.615850e-47 |
| Msa1083940 | Msa1374850 | 0.804304 | 2.303829e-49 | -8.615850e-47 |
| Msa1083940 | Msa1376510 | 0.804817 | 1.800166e-49 | -8.615850e-47 |
| Msa1083940 | Msa1393550 | 0.817212 | 3.706724e-52 | -8.615850e-47 |
| Msa1083940 | Msa1414000 | 0.833067 | 6.596143e-56 | -8.615850e-47 |
| Msa1083940 | Msa1414280 | 0.811555 | 6.603236e-51 | -8.615850e-47 |
| Msa1083940 | Msa1418010 | 0.819598 | 1.067854e-52 | -8.615850e-47 |
| Msa1083940 | Msa1418210 | 0.802896 | 4.513042e-49 | -8.615850e-47 |
| Msa1083940 | Msa1420130 | 0.829184 | 5.931951e-55 | -8.615850e-47 |
| Msa1083940 | Msa1425110 | 0.816602 | 5.080415e-52 | -8.615850e-47 |
| Msa1083940 | Msa1426310 | 0.818134 | 2.296512e-52 | -8.615850e-47 |
| Msa1083940 | Msa1426870 | 0.802730 | 4.883431e-49 | -8.615850e-47 |
| Msa1083940 | Msa1449320 | 0.810613 | 1.056316e-50 | -8.615850e-47 |
| Msa1083940 | Msa1451780 | 0.812288 | 4.571445e-51 | -8.615850e-47 |
| Msa1083940 | Msa1453540 | 0.809935 | 1.479780e-50 | -8.615850e-47 |
| Msa1083940 | Msa1463500 | 0.825810 | 3.825973e-54 | -8.615850e-47 |
| Msa1083940 | Msa1465380 | 0.813166 | 2.937402e-51 | -8.615850e-47 |
| Msa1083940 | Msa1465410 | 0.803075 | 4.144477e-49 | -8.615850e-47 |
| Msa1083940 | Msa1466170 | 0.836201 | 1.074996e-56 | -8.615850e-47 |
| Msa0243160 | Msa1083940 | 0.822394 | 2.424570e-53 | -8.615850e-47 |
| Msa0266100 | Msa1083940 | 0.808001 | 3.837209e-50 | -8.615850e-47 |
| Msa0266150 | Msa1083940 | 0.806165 | 9.389769e-50 | -8.615850e-47 |
| Msa0274890 | Msa1083940 | 0.802737 | 4.866512e-49 | -8.615850e-47 |
| Msa0285510 | Msa1083940 | 0.811777 | 5.908804e-51 | -8.615850e-47 |
| Msa0292150 | Msa1083940 | 0.818663 | 1.743193e-52 | -8.615850e-47 |
| Msa0292300 | Msa1083940 | 0.808006 | 3.827464e-50 | -8.615850e-47 |
| Msa0304020 | Msa1083940 | 0.812435 | 4.246388e-51 | -8.615850e-47 |
| Msa0304070 | Msa1083940 | 0.802279 | 6.048876e-49 | -8.615850e-47 |
| Msa0311130 | Msa1083940 | 0.807042 | 6.132551e-50 | -8.615850e-47 |
| Msa0314980 | Msa1083940 | 0.819672 | 1.027201e-52 | -8.615850e-47 |
| Msa0327870 | Msa1083940 | 0.813059 | 3.100531e-51 | -8.615850e-47 |
| Msa0330370 | Msa1083940 | 0.800218 | 1.597601e-48 | -8.615850e-47 |
| Msa0330770 | Msa1083940 | 0.806444 | 8.200227e-50 | -8.615850e-47 |
| Msa0335860 | Msa1083940 | 0.821958 | 3.060328e-53 | -8.615850e-47 |
| Msa0341710 | Msa1083940 | 0.810151 | 1.329263e-50 | -8.615850e-47 |
| Msa0355590 | Msa1083940 | 0.823234 | 1.545876e-53 | -8.615850e-47 |
| Msa0485210 | Msa1083940 | 0.801416 | 9.096569e-49 | -8.615850e-47 |
| Msa0485260 | Msa1083940 | 0.801519 | 8.668018e-49 | -8.615850e-47 |
| Msa0500490 | Msa1083940 | 0.812816 | 3.504355e-51 | -8.615850e-47 |
| Msa0504360 | Msa1083940 | 0.815611 | 8.458691e-52 | -8.615850e-47 |
| Msa0504640 | Msa1083940 | 0.820342 | 7.213959e-53 | -8.615850e-47 |
| Msa0508620 | Msa1083940 | 0.800244 | 1.578327e-48 | -8.615850e-47 |
| Msa0508660 | Msa1083940 | 0.800398 | 1.468288e-48 | -8.615850e-47 |
| Msa0515420 | Msa1083940 | 0.821519 | 3.867295e-53 | -8.615850e-47 |
| Msa0515830 | Msa1083940 | 0.800502 | 1.398481e-48 | -8.615850e-47 |
| Msa0527210 | Msa1083940 | 0.806043 | 9.964456e-50 | -8.615850e-47 |
| Msa0530220 | Msa1083940 | 0.820959 | 5.206777e-53 | -8.615850e-47 |
| Msa0530250 | Msa1083940 | 0.816713 | 4.798570e-52 | -8.615850e-47 |
| Msa0538100 | Msa1083940 | 0.833427 | 5.366318e-56 | -8.615850e-47 |
| Msa0546020 | Msa1083940 | 0.849738 | 2.666753e-60 | -8.615850e-47 |
| Msa0552660 | Msa1083940 | 0.821506 | 3.893356e-53 | -8.615850e-47 |
| Msa0560010 | Msa1083940 | 0.813017 | 3.167050e-51 | -8.615850e-47 |
| Msa0562740 | Msa1083940 | 0.819081 | 1.400236e-52 | -8.615850e-47 |
| Msa0585770 | Msa1083940 | 0.831247 | 1.859702e-55 | -8.615850e-47 |
| Msa0868040 | Msa1083940 | 0.802568 | 5.274175e-49 | -8.615850e-47 |
| Msa0912110 | Msa1083940 | 0.802003 | 6.893628e-49 | -8.615850e-47 |
| Msa0917630 | Msa1083940 | 0.807466 | 4.986502e-50 | -8.615850e-47 |
| Msa0928840 | Msa1083940 | 0.825624 | 4.235952e-54 | -8.615850e-47 |
| Msa0930150 | Msa1083940 | 0.801120 | 1.046043e-48 | -8.615850e-47 |
| Msa0932040 | Msa1083940 | 0.813486 | 2.497986e-51 | -8.615850e-47 |
| Msa0968960 | Msa1083940 | 0.804522 | 2.074463e-49 | -8.615850e-47 |
| Msa0968970 | Msa1083940 | 0.807238 | 5.572632e-50 | -8.615850e-47 |
| Msa0970120 | Msa1083940 | 0.811160 | 8.045623e-51 | -8.615850e-47 |
| Msa0970160 | Msa1083940 | 0.809645 | 1.707900e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083940 | MtrunA17_Chr7g0274271 | 96.721 | 122 | 4 | 0 | 46 | 167 | 382 | 503 | 6.89e-82 | 251 |
| Msa1083940 | MtrunA17_Chr1g0207371 | 84.091 | 44 | 7 | 0 | 46 | 89 | 36 | 79 | 2.17e-18 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083940 | AT3G04650.1 | 72.131 | 122 | 34 | 0 | 46 | 167 | 348 | 469 | 2.62e-58 | 189 |
Find 56 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTGGAGCTTCGTATAAAA+AGG | 0.246702 | 7_2:+84240918 | None:intergenic |
| TTTATACGAAGCTCCAACTA+TGG | 0.297002 | 7_2:-84240914 | Msa1083940:intron |
| CCTTGCATCTTTGATCCCTT+TGG | 0.312753 | 7_2:-84240545 | Msa1083940:CDS |
| TTTGATCCCTTTGGAAGGGC+TGG | 0.351182 | 7_2:-84240536 | Msa1083940:CDS |
| CCACTGGAAGGGCATGATAT+TGG | 0.357198 | 7_2:-84240192 | Msa1083940:CDS |
| TGTAGCTGTTGAGGGGTATA+AGG | 0.358356 | 7_2:-84241476 | Msa1083940:CDS |
| ACTTTGACTCTTACCATAGT+TGG | 0.379168 | 7_2:+84240901 | None:intergenic |
| CAGGGTCAGTTCCGAGACTT+TGG | 0.419022 | 7_2:+84240250 | None:intergenic |
| GTCATTACATGTAGCTGTTG+AGG | 0.431807 | 7_2:-84241485 | Msa1083940:CDS |
| TCATTACATGTAGCTGTTGA+GGG | 0.461014 | 7_2:-84241484 | Msa1083940:CDS |
| ATATGTGGTGATTGGCTGCT+AGG | 0.461805 | 7_2:-84240512 | Msa1083940:CDS |
| CATCTTTGATCCCTTTGGAA+GGG | 0.464319 | 7_2:-84240540 | Msa1083940:CDS |
| GCATCTTTGATCCCTTTGGA+AGG | 0.471178 | 7_2:-84240541 | Msa1083940:CDS |
| TTGATCCCTTTGGAAGGGCT+GGG | 0.471633 | 7_2:-84240535 | Msa1083940:CDS |
| GTAAAGGAAGGCATGCTAGA+AGG | 0.474473 | 7_2:-84240984 | Msa1083940:CDS |
| CATGATATTGGACAATTCCC+AGG | 0.495655 | 7_2:-84240180 | None:intergenic |
| TTTGGAAGGGCTGGGATATG+TGG | 0.496617 | 7_2:-84240527 | Msa1083940:CDS |
| AAACCAACAGCAAACTCTCC+AGG | 0.498698 | 7_2:+84240231 | None:intergenic |
| GGGCTGGGATATGTGGTGAT+TGG | 0.502331 | 7_2:-84240520 | Msa1083940:CDS |
| GGAACTCCAGGTGTGTTAGT+TGG | 0.508557 | 7_2:+84240566 | None:intergenic |
| TCAAAGATGCAAGGAACTCC+AGG | 0.513356 | 7_2:+84240554 | None:intergenic |
| CAAAGTCTCGGAACTGACCC+TGG | 0.517585 | 7_2:-84240249 | Msa1083940:CDS |
| GACCCTGGAGAGTTTGCTGT+TGG | 0.521304 | 7_2:-84240234 | Msa1083940:CDS |
| TGTTACAGCAACAAGGGTAA+AGG | 0.528484 | 7_2:-84241000 | Msa1083940:CDS |
| GCTGCTAGGTTCTAATATAG+AGG | 0.529461 | 7_2:-84240498 | Msa1083940:CDS |
| TGAAACTGAAACTCTCCGTT+GGG | 0.533656 | 7_2:+84241443 | None:intergenic |
| GAATCATGAGTTTCAACCAC+TGG | 0.544214 | 7_2:-84240208 | Msa1083940:CDS |
| ACTCTCCGTTGGGAGGGAAG+TGG | 0.554139 | 7_2:+84241453 | None:intergenic |
| TTGAAACTGAAACTCTCCGT+TGG | 0.562346 | 7_2:+84241442 | None:intergenic |
| ACTATCTCTTTCTTTCGAAG+AGG | 0.564189 | 7_2:-84241527 | Msa1083940:CDS |
| ACCCTTGTTGCTGTAACAGT+AGG | 0.565468 | 7_2:+84241005 | None:intergenic |
| AAGTAACGTCACCGGTCTCA+AGG | 0.566027 | 7_2:+84241408 | None:intergenic |
| GAAGGTGTTGAGGCTGCCCT+CGG | 0.566261 | 7_2:-84240966 | Msa1083940:CDS |
| ACTGAAACTCTCCGTTGGGA+GGG | 0.566485 | 7_2:+84241447 | None:intergenic |
| AACTGAAACTCTCCGTTGGG+AGG | 0.568769 | 7_2:+84241446 | None:intergenic |
| CATATCCCAGCCCTTCCAAA+GGG | 0.571328 | 7_2:+84240530 | None:intergenic |
| ATAGAGGCAGCAGTCATAAG+TGG | 0.573140 | 7_2:-84240482 | Msa1083940:CDS |
| CCAATATCATGCCCTTCCAG+TGG | 0.575651 | 7_2:+84240192 | None:intergenic |
| AGTAACGTCACCGGTCTCAA+GGG | 0.583459 | 7_2:+84241409 | None:intergenic |
| GTTAAATCATCCCTTGAGAC+CGG | 0.584690 | 7_2:-84241419 | Msa1083940:intron |
| GCAGACTATATCCAAAGTCT+CGG | 0.585256 | 7_2:-84240261 | Msa1083940:CDS |
| TTCCTACTGTTACAGCAACA+AGG | 0.590217 | 7_2:-84241007 | Msa1083940:CDS |
| CATGAGTTTCAACCACTGGA+AGG | 0.591971 | 7_2:-84240204 | Msa1083940:CDS |
| AACCAACAGCAAACTCTCCA+GGG | 0.596550 | 7_2:+84240232 | None:intergenic |
| ATGAGTTTCAACCACTGGAA+GGG | 0.600186 | 7_2:-84240203 | Msa1083940:CDS |
| GCTCTTCCAACTAACACACC+TGG | 0.600578 | 7_2:-84240572 | Msa1083940:CDS |
| CATTACATGTAGCTGTTGAG+GGG | 0.603722 | 7_2:-84241483 | Msa1083940:CDS |
| ACATATCCCAGCCCTTCCAA+AGG | 0.604486 | 7_2:+84240529 | None:intergenic |
| CCAAAGGGATCAAAGATGCA+AGG | 0.620527 | 7_2:+84240545 | None:intergenic |
| GCTGCCCTCGGATTATCGAA+AGG | 0.624060 | 7_2:-84240954 | Msa1083940:CDS |
| TAAGGCCACTTCCCTCCCAA+CGG | 0.628030 | 7_2:-84241458 | Msa1083940:CDS |
| TCCTACTGTTACAGCAACAA+GGG | 0.638142 | 7_2:-84241006 | Msa1083940:CDS |
| AGGCATGCTAGAAGGTGTTG+AGG | 0.643411 | 7_2:-84240976 | Msa1083940:CDS |
| GCAACCCTTTCGATAATCCG+AGG | 0.646112 | 7_2:+84240949 | None:intergenic |
| ACAGCAACAAGGGTAAAGGA+AGG | 0.657319 | 7_2:-84240996 | Msa1083940:CDS |
| CAACCCTTTCGATAATCCGA+GGG | 0.671065 | 7_2:+84240950 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGAAATGAATCTTCTAT+TGG | - | chr7_2:84240354-84240373 | Msa1083940:intron | 20.0% |
| !!! | ATAAATTTTAATCAAATCCC+TGG | + | chr7_2:84240585-84240604 | None:intergenic | 20.0% |
| !! | ACATTGTAAGTAAACTTAAA+AGG | - | chr7_2:84241082-84241101 | Msa1083940:intron | 20.0% |
| !! | TAAACATGAATTACTACTAA+TGG | + | chr7_2:84241362-84241381 | None:intergenic | 20.0% |
| !! | ATATGAAATGAATCTTCTAT+TGG | - | chr7_2:84240354-84240373 | Msa1083940:intron | 20.0% |
| !!! | ATAAATTTTAATCAAATCCC+TGG | + | chr7_2:84240585-84240604 | None:intergenic | 20.0% |
| !! | ACATTGTAAGTAAACTTAAA+AGG | - | chr7_2:84241082-84241101 | Msa1083940:intron | 20.0% |
| !! | TAAACATGAATTACTACTAA+TGG | + | chr7_2:84241362-84241381 | None:intergenic | 20.0% |
| ! | ATACACAAATGAAAATGCAT+GGG | + | chr7_2:84240622-84240641 | None:intergenic | 25.0% |
| ! | AATACACAAATGAAAATGCA+TGG | + | chr7_2:84240623-84240642 | None:intergenic | 25.0% |
| !! | TTTTCCTGATAAACAAAACA+TGG | + | chr7_2:84240685-84240704 | None:intergenic | 25.0% |
| !!! | GTATTATTCTGAGATTTTCA+GGG | - | chr7_2:84241114-84241133 | Msa1083940:intron | 25.0% |
| !!! | TATTATTCTGAGATTTTCAG+GGG | - | chr7_2:84241115-84241134 | Msa1083940:intron | 25.0% |
| !! | CACAATTTTGAACAACAAAA+GGG | + | chr7_2:84241411-84241430 | None:intergenic | 25.0% |
| !! | ACACAATTTTGAACAACAAA+AGG | + | chr7_2:84241412-84241431 | None:intergenic | 25.0% |
| !! | TTGTTGTTCAAAATTGTGTT+TGG | - | chr7_2:84241413-84241432 | Msa1083940:intron | 25.0% |
| ! | ATACACAAATGAAAATGCAT+GGG | + | chr7_2:84240622-84240641 | None:intergenic | 25.0% |
| ! | AATACACAAATGAAAATGCA+TGG | + | chr7_2:84240623-84240642 | None:intergenic | 25.0% |
| !! | TTTTCCTGATAAACAAAACA+TGG | + | chr7_2:84240685-84240704 | None:intergenic | 25.0% |
| !!! | GTATTATTCTGAGATTTTCA+GGG | - | chr7_2:84241114-84241133 | Msa1083940:intron | 25.0% |
| !!! | TATTATTCTGAGATTTTCAG+GGG | - | chr7_2:84241115-84241134 | Msa1083940:intron | 25.0% |
| !! | CACAATTTTGAACAACAAAA+GGG | + | chr7_2:84241411-84241430 | None:intergenic | 25.0% |
| !! | ACACAATTTTGAACAACAAA+AGG | + | chr7_2:84241412-84241431 | None:intergenic | 25.0% |
| !! | TTGTTGTTCAAAATTGTGTT+TGG | - | chr7_2:84241413-84241432 | Msa1083940:intron | 25.0% |
| GGCAAATATTATTCTAGGTA+AGG | + | chr7_2:84240564-84240583 | None:intergenic | 30.0% | |
| TACCTAGAATAATATTTGCC+AGG | - | chr7_2:84240564-84240583 | Msa1083940:CDS | 30.0% | |
| ACCTAGAATAATATTTGCCA+GGG | - | chr7_2:84240565-84240584 | Msa1083940:CDS | 30.0% | |
| AGCTTCGTATAAAAAGGTTT+AGG | + | chr7_2:84240793-84240812 | None:intergenic | 30.0% | |
| TATGTTGTCAACAAATCAGA+CGG | - | chr7_2:84241014-84241033 | Msa1083940:CDS | 30.0% | |
| !!! | CGTATTATTCTGAGATTTTC+AGG | - | chr7_2:84241113-84241132 | Msa1083940:intron | 30.0% |
| AACAAACCACGTAAATTAGA+AGG | + | chr7_2:84241297-84241316 | None:intergenic | 30.0% | |
| AAAGAAAGAGATAGTGACAT+TGG | + | chr7_2:84240182-84240201 | None:intergenic | 30.0% | |
| GGCAAATATTATTCTAGGTA+AGG | + | chr7_2:84240564-84240583 | None:intergenic | 30.0% | |
| TACCTAGAATAATATTTGCC+AGG | - | chr7_2:84240564-84240583 | Msa1083940:CDS | 30.0% | |
| ACCTAGAATAATATTTGCCA+GGG | - | chr7_2:84240565-84240584 | Msa1083940:CDS | 30.0% | |
| AGCTTCGTATAAAAAGGTTT+AGG | + | chr7_2:84240793-84240812 | None:intergenic | 30.0% | |
| TATGTTGTCAACAAATCAGA+CGG | - | chr7_2:84241014-84241033 | Msa1083940:CDS | 30.0% | |
| !!! | CGTATTATTCTGAGATTTTC+AGG | - | chr7_2:84241113-84241132 | Msa1083940:intron | 30.0% |
| AACAAACCACGTAAATTAGA+AGG | + | chr7_2:84241297-84241316 | None:intergenic | 30.0% | |
| ACTATCTCTTTCTTTCGAAG+AGG | - | chr7_2:84240187-84240206 | Msa1083940:CDS | 35.0% | |
| TCATTACATGTAGCTGTTGA+GGG | - | chr7_2:84240230-84240249 | Msa1083940:CDS | 35.0% | |
| AATGAATCTTCTATTGGCAG+AGG | - | chr7_2:84240360-84240379 | Msa1083940:intron | 35.0% | |
| AGTATATGAACTTGCCAAGT+AGG | + | chr7_2:84240412-84240431 | None:intergenic | 35.0% | |
| ACTTGGCAAGTTCATATACT+TGG | - | chr7_2:84240412-84240431 | Msa1083940:intron | 35.0% | |
| CTTGGCAAGTTCATATACTT+GGG | - | chr7_2:84240413-84240432 | Msa1083940:intron | 35.0% | |
| TCCCTGGCAAATATTATTCT+AGG | + | chr7_2:84240569-84240588 | None:intergenic | 35.0% | |
| !!! | TGAGCCATGTTTTGTTTATC+AGG | - | chr7_2:84240678-84240697 | Msa1083940:intron | 35.0% |
| AGTTGGAGCTTCGTATAAAA+AGG | + | chr7_2:84240799-84240818 | None:intergenic | 35.0% | |
| TTTATACGAAGCTCCAACTA+TGG | - | chr7_2:84240800-84240819 | Msa1083940:intron | 35.0% | |
| ACTTTGACTCTTACCATAGT+TGG | + | chr7_2:84240816-84240835 | None:intergenic | 35.0% | |
| AACCTGAACAAAAACATGTC+AGG | + | chr7_2:84240875-84240894 | None:intergenic | 35.0% | |
| ! | ACTTACAATGTTTAGAGCTG+CGG | + | chr7_2:84241073-84241092 | None:intergenic | 35.0% |
| CCAATTGAAAGTGACATACA+TGG | + | chr7_2:84241273-84241292 | None:intergenic | 35.0% | |
| !! | CCATGTATGTCACTTTCAAT+TGG | - | chr7_2:84241270-84241289 | Msa1083940:intron | 35.0% |
| ATTGGACCTTCTAATTTACG+TGG | - | chr7_2:84241288-84241307 | Msa1083940:intron | 35.0% | |
| ACTATCTCTTTCTTTCGAAG+AGG | - | chr7_2:84240187-84240206 | Msa1083940:CDS | 35.0% | |
| TCATTACATGTAGCTGTTGA+GGG | - | chr7_2:84240230-84240249 | Msa1083940:CDS | 35.0% | |
| AATGAATCTTCTATTGGCAG+AGG | - | chr7_2:84240360-84240379 | Msa1083940:intron | 35.0% | |
| AGTATATGAACTTGCCAAGT+AGG | + | chr7_2:84240412-84240431 | None:intergenic | 35.0% | |
| ACTTGGCAAGTTCATATACT+TGG | - | chr7_2:84240412-84240431 | Msa1083940:intron | 35.0% | |
| CTTGGCAAGTTCATATACTT+GGG | - | chr7_2:84240413-84240432 | Msa1083940:intron | 35.0% | |
| TCCCTGGCAAATATTATTCT+AGG | + | chr7_2:84240569-84240588 | None:intergenic | 35.0% | |
| !!! | TGAGCCATGTTTTGTTTATC+AGG | - | chr7_2:84240678-84240697 | Msa1083940:intron | 35.0% |
| AGTTGGAGCTTCGTATAAAA+AGG | + | chr7_2:84240799-84240818 | None:intergenic | 35.0% | |
| TTTATACGAAGCTCCAACTA+TGG | - | chr7_2:84240800-84240819 | Msa1083940:intron | 35.0% | |
| ACTTTGACTCTTACCATAGT+TGG | + | chr7_2:84240816-84240835 | None:intergenic | 35.0% | |
| AACCTGAACAAAAACATGTC+AGG | + | chr7_2:84240875-84240894 | None:intergenic | 35.0% | |
| ! | ACTTACAATGTTTAGAGCTG+CGG | + | chr7_2:84241073-84241092 | None:intergenic | 35.0% |
| CCAATTGAAAGTGACATACA+TGG | + | chr7_2:84241273-84241292 | None:intergenic | 35.0% | |
| !! | CCATGTATGTCACTTTCAAT+TGG | - | chr7_2:84241270-84241289 | Msa1083940:intron | 35.0% |
| ATTGGACCTTCTAATTTACG+TGG | - | chr7_2:84241288-84241307 | Msa1083940:intron | 35.0% | |
| GTCATTACATGTAGCTGTTG+AGG | - | chr7_2:84240229-84240248 | Msa1083940:CDS | 40.0% | |
| CATTACATGTAGCTGTTGAG+GGG | - | chr7_2:84240231-84240250 | Msa1083940:CDS | 40.0% | |
| TGAAACTGAAACTCTCCGTT+GGG | + | chr7_2:84240274-84240293 | None:intergenic | 40.0% | |
| TTGAAACTGAAACTCTCCGT+TGG | + | chr7_2:84240275-84240294 | None:intergenic | 40.0% | |
| GTTAAATCATCCCTTGAGAC+CGG | - | chr7_2:84240295-84240314 | Msa1083940:intron | 40.0% | |
| CATTTCATATCCATGCGCTA+TGG | + | chr7_2:84240344-84240363 | None:intergenic | 40.0% | |
| TTCCTACTGTTACAGCAACA+AGG | - | chr7_2:84240707-84240726 | Msa1083940:intron | 40.0% | |
| TCCTACTGTTACAGCAACAA+GGG | - | chr7_2:84240708-84240727 | Msa1083940:intron | 40.0% | |
| TGTTACAGCAACAAGGGTAA+AGG | - | chr7_2:84240714-84240733 | Msa1083940:intron | 40.0% | |
| CTGAACAAAAACATGTCAGG+AGG | + | chr7_2:84240872-84240891 | None:intergenic | 40.0% | |
| !! | CTCCTGACATGTTTTTGTTC+AGG | - | chr7_2:84240870-84240889 | Msa1083940:intron | 40.0% |
| ! | CATCTTTGATCCCTTTGGAA+GGG | - | chr7_2:84241174-84241193 | Msa1083940:intron | 40.0% |
| ! | GCTGCTAGGTTCTAATATAG+AGG | - | chr7_2:84241216-84241235 | Msa1083940:intron | 40.0% |
| GCAGACTATATCCAAAGTCT+CGG | - | chr7_2:84241453-84241472 | Msa1083940:CDS | 40.0% | |
| GAATCATGAGTTTCAACCAC+TGG | - | chr7_2:84241506-84241525 | Msa1083940:CDS | 40.0% | |
| ATGAGTTTCAACCACTGGAA+GGG | - | chr7_2:84241511-84241530 | Msa1083940:CDS | 40.0% | |
| GTCATTACATGTAGCTGTTG+AGG | - | chr7_2:84240229-84240248 | Msa1083940:CDS | 40.0% | |
| CATTACATGTAGCTGTTGAG+GGG | - | chr7_2:84240231-84240250 | Msa1083940:CDS | 40.0% | |
| TGAAACTGAAACTCTCCGTT+GGG | + | chr7_2:84240274-84240293 | None:intergenic | 40.0% | |
| TTGAAACTGAAACTCTCCGT+TGG | + | chr7_2:84240275-84240294 | None:intergenic | 40.0% | |
| GTTAAATCATCCCTTGAGAC+CGG | - | chr7_2:84240295-84240314 | Msa1083940:intron | 40.0% | |
| CATTTCATATCCATGCGCTA+TGG | + | chr7_2:84240344-84240363 | None:intergenic | 40.0% | |
| TTCCTACTGTTACAGCAACA+AGG | - | chr7_2:84240707-84240726 | Msa1083940:intron | 40.0% | |
| TCCTACTGTTACAGCAACAA+GGG | - | chr7_2:84240708-84240727 | Msa1083940:intron | 40.0% | |
| TGTTACAGCAACAAGGGTAA+AGG | - | chr7_2:84240714-84240733 | Msa1083940:intron | 40.0% | |
| CTGAACAAAAACATGTCAGG+AGG | + | chr7_2:84240872-84240891 | None:intergenic | 40.0% | |
| !! | CTCCTGACATGTTTTTGTTC+AGG | - | chr7_2:84240870-84240889 | Msa1083940:intron | 40.0% |
| ! | CATCTTTGATCCCTTTGGAA+GGG | - | chr7_2:84241174-84241193 | Msa1083940:intron | 40.0% |
| ! | GCTGCTAGGTTCTAATATAG+AGG | - | chr7_2:84241216-84241235 | Msa1083940:intron | 40.0% |
| GCAGACTATATCCAAAGTCT+CGG | - | chr7_2:84241453-84241472 | Msa1083940:CDS | 40.0% | |
| GAATCATGAGTTTCAACCAC+TGG | - | chr7_2:84241506-84241525 | Msa1083940:CDS | 40.0% | |
| ATGAGTTTCAACCACTGGAA+GGG | - | chr7_2:84241511-84241530 | Msa1083940:CDS | 40.0% | |
| ! | TGTAGCTGTTGAGGGGTATA+AGG | - | chr7_2:84240238-84240257 | Msa1083940:CDS | 45.0% |
| TATGAGCACCATAGCCTACT+TGG | - | chr7_2:84240395-84240414 | Msa1083940:intron | 45.0% | |
| TGAACTTGCCAAGTAGGCTA+TGG | + | chr7_2:84240406-84240425 | None:intergenic | 45.0% | |
| ACCCTTGTTGCTGTAACAGT+AGG | + | chr7_2:84240712-84240731 | None:intergenic | 45.0% | |
| ACAGCAACAAGGGTAAAGGA+AGG | - | chr7_2:84240718-84240737 | Msa1083940:intron | 45.0% | |
| ! | GTAAAGGAAGGCATGCTAGA+AGG | - | chr7_2:84240730-84240749 | Msa1083940:intron | 45.0% |
| CAACCCTTTCGATAATCCGA+GGG | + | chr7_2:84240767-84240786 | None:intergenic | 45.0% | |
| TCAAAGATGCAAGGAACTCC+AGG | + | chr7_2:84241163-84241182 | None:intergenic | 45.0% | |
| CCAAAGGGATCAAAGATGCA+AGG | + | chr7_2:84241172-84241191 | None:intergenic | 45.0% | |
| CCTTGCATCTTTGATCCCTT+TGG | - | chr7_2:84241169-84241188 | Msa1083940:intron | 45.0% | |
| GCATCTTTGATCCCTTTGGA+AGG | - | chr7_2:84241173-84241192 | Msa1083940:intron | 45.0% | |
| ! | ATATGTGGTGATTGGCTGCT+AGG | - | chr7_2:84241202-84241221 | Msa1083940:intron | 45.0% |
| ATAGAGGCAGCAGTCATAAG+TGG | - | chr7_2:84241232-84241251 | Msa1083940:intron | 45.0% | |
| AACCAACAGCAAACTCTCCA+GGG | + | chr7_2:84241485-84241504 | None:intergenic | 45.0% | |
| AAACCAACAGCAAACTCTCC+AGG | + | chr7_2:84241486-84241505 | None:intergenic | 45.0% | |
| CATGAGTTTCAACCACTGGA+AGG | - | chr7_2:84241510-84241529 | Msa1083940:CDS | 45.0% | |
| ! | TGTAGCTGTTGAGGGGTATA+AGG | - | chr7_2:84240238-84240257 | Msa1083940:CDS | 45.0% |
| TATGAGCACCATAGCCTACT+TGG | - | chr7_2:84240395-84240414 | Msa1083940:intron | 45.0% | |
| TGAACTTGCCAAGTAGGCTA+TGG | + | chr7_2:84240406-84240425 | None:intergenic | 45.0% | |
| ACCCTTGTTGCTGTAACAGT+AGG | + | chr7_2:84240712-84240731 | None:intergenic | 45.0% | |
| ACAGCAACAAGGGTAAAGGA+AGG | - | chr7_2:84240718-84240737 | Msa1083940:intron | 45.0% | |
| ! | GTAAAGGAAGGCATGCTAGA+AGG | - | chr7_2:84240730-84240749 | Msa1083940:intron | 45.0% |
| CAACCCTTTCGATAATCCGA+GGG | + | chr7_2:84240767-84240786 | None:intergenic | 45.0% | |
| TCAAAGATGCAAGGAACTCC+AGG | + | chr7_2:84241163-84241182 | None:intergenic | 45.0% | |
| CCAAAGGGATCAAAGATGCA+AGG | + | chr7_2:84241172-84241191 | None:intergenic | 45.0% | |
| CCTTGCATCTTTGATCCCTT+TGG | - | chr7_2:84241169-84241188 | Msa1083940:intron | 45.0% | |
| GCATCTTTGATCCCTTTGGA+AGG | - | chr7_2:84241173-84241192 | Msa1083940:intron | 45.0% | |
| ! | ATATGTGGTGATTGGCTGCT+AGG | - | chr7_2:84241202-84241221 | Msa1083940:intron | 45.0% |
| ATAGAGGCAGCAGTCATAAG+TGG | - | chr7_2:84241232-84241251 | Msa1083940:intron | 45.0% | |
| AACCAACAGCAAACTCTCCA+GGG | + | chr7_2:84241485-84241504 | None:intergenic | 45.0% | |
| AAACCAACAGCAAACTCTCC+AGG | + | chr7_2:84241486-84241505 | None:intergenic | 45.0% | |
| CATGAGTTTCAACCACTGGA+AGG | - | chr7_2:84241510-84241529 | Msa1083940:CDS | 45.0% | |
| !! | TAAATTAAAAAAAAAAATTG+TGG | + | chr7_2:84241322-84241341 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTAATTTAGTAAT+TGG | - | chr7_2:84241327-84241346 | Msa1083940:intron | 5.0% |
| !! | TAAATTAAAAAAAAAAATTG+TGG | + | chr7_2:84241322-84241341 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTAATTTAGTAAT+TGG | - | chr7_2:84241327-84241346 | Msa1083940:intron | 5.0% |
| ACTGAAACTCTCCGTTGGGA+GGG | + | chr7_2:84240270-84240289 | None:intergenic | 50.0% | |
| AACTGAAACTCTCCGTTGGG+AGG | + | chr7_2:84240271-84240290 | None:intergenic | 50.0% | |
| AGTAACGTCACCGGTCTCAA+GGG | + | chr7_2:84240308-84240327 | None:intergenic | 50.0% | |
| AAGTAACGTCACCGGTCTCA+AGG | + | chr7_2:84240309-84240328 | None:intergenic | 50.0% | |
| ! | AGACCGGTGACGTTACTTTC+AGG | - | chr7_2:84240311-84240330 | Msa1083940:intron | 50.0% |
| ! | GACCGGTGACGTTACTTTCA+GGG | - | chr7_2:84240312-84240331 | Msa1083940:intron | 50.0% |
| ! | ACCGGTGACGTTACTTTCAG+GGG | - | chr7_2:84240313-84240332 | Msa1083940:intron | 50.0% |
| TCCCCTGAAAGTAACGTCAC+CGG | + | chr7_2:84240317-84240336 | None:intergenic | 50.0% | |
| AGGGGAATTTCCATAGCGCA+TGG | - | chr7_2:84240331-84240350 | Msa1083940:intron | 50.0% | |
| GGCTATGGTGCTCATAAAGC+AGG | + | chr7_2:84240391-84240410 | None:intergenic | 50.0% | |
| !! | AGGCATGCTAGAAGGTGTTG+AGG | - | chr7_2:84240738-84240757 | Msa1083940:intron | 50.0% |
| CTGCCCTCGGATTATCGAAA+GGG | - | chr7_2:84240761-84240780 | Msa1083940:intron | 50.0% | |
| GCAACCCTTTCGATAATCCG+AGG | + | chr7_2:84240768-84240787 | None:intergenic | 50.0% | |
| GCTCTTCCAACTAACACACC+TGG | - | chr7_2:84241142-84241161 | Msa1083940:intron | 50.0% | |
| GGAACTCCAGGTGTGTTAGT+TGG | + | chr7_2:84241151-84241170 | None:intergenic | 50.0% | |
| ! | TTTGATCCCTTTGGAAGGGC+TGG | - | chr7_2:84241178-84241197 | Msa1083940:intron | 50.0% |
| ! | TTGATCCCTTTGGAAGGGCT+GGG | - | chr7_2:84241179-84241198 | Msa1083940:intron | 50.0% |
| CATATCCCAGCCCTTCCAAA+GGG | + | chr7_2:84241187-84241206 | None:intergenic | 50.0% | |
| ACATATCCCAGCCCTTCCAA+AGG | + | chr7_2:84241188-84241207 | None:intergenic | 50.0% | |
| TTTGGAAGGGCTGGGATATG+TGG | - | chr7_2:84241187-84241206 | Msa1083940:intron | 50.0% | |
| CCAATATCATGCCCTTCCAG+TGG | + | chr7_2:84241525-84241544 | None:intergenic | 50.0% | |
| ! | CCACTGGAAGGGCATGATAT+TGG | - | chr7_2:84241522-84241541 | Msa1083940:CDS | 50.0% |
| ACTGAAACTCTCCGTTGGGA+GGG | + | chr7_2:84240270-84240289 | None:intergenic | 50.0% | |
| AACTGAAACTCTCCGTTGGG+AGG | + | chr7_2:84240271-84240290 | None:intergenic | 50.0% | |
| AGTAACGTCACCGGTCTCAA+GGG | + | chr7_2:84240308-84240327 | None:intergenic | 50.0% | |
| AAGTAACGTCACCGGTCTCA+AGG | + | chr7_2:84240309-84240328 | None:intergenic | 50.0% | |
| ! | AGACCGGTGACGTTACTTTC+AGG | - | chr7_2:84240311-84240330 | Msa1083940:intron | 50.0% |
| ! | GACCGGTGACGTTACTTTCA+GGG | - | chr7_2:84240312-84240331 | Msa1083940:intron | 50.0% |
| ! | ACCGGTGACGTTACTTTCAG+GGG | - | chr7_2:84240313-84240332 | Msa1083940:intron | 50.0% |
| TCCCCTGAAAGTAACGTCAC+CGG | + | chr7_2:84240317-84240336 | None:intergenic | 50.0% | |
| AGGGGAATTTCCATAGCGCA+TGG | - | chr7_2:84240331-84240350 | Msa1083940:intron | 50.0% | |
| GGCTATGGTGCTCATAAAGC+AGG | + | chr7_2:84240391-84240410 | None:intergenic | 50.0% | |
| !! | AGGCATGCTAGAAGGTGTTG+AGG | - | chr7_2:84240738-84240757 | Msa1083940:intron | 50.0% |
| CTGCCCTCGGATTATCGAAA+GGG | - | chr7_2:84240761-84240780 | Msa1083940:intron | 50.0% | |
| GCAACCCTTTCGATAATCCG+AGG | + | chr7_2:84240768-84240787 | None:intergenic | 50.0% | |
| GCTCTTCCAACTAACACACC+TGG | - | chr7_2:84241142-84241161 | Msa1083940:intron | 50.0% | |
| GGAACTCCAGGTGTGTTAGT+TGG | + | chr7_2:84241151-84241170 | None:intergenic | 50.0% | |
| ! | TTTGATCCCTTTGGAAGGGC+TGG | - | chr7_2:84241178-84241197 | Msa1083940:intron | 50.0% |
| ! | TTGATCCCTTTGGAAGGGCT+GGG | - | chr7_2:84241179-84241198 | Msa1083940:intron | 50.0% |
| CATATCCCAGCCCTTCCAAA+GGG | + | chr7_2:84241187-84241206 | None:intergenic | 50.0% | |
| ACATATCCCAGCCCTTCCAA+AGG | + | chr7_2:84241188-84241207 | None:intergenic | 50.0% | |
| TTTGGAAGGGCTGGGATATG+TGG | - | chr7_2:84241187-84241206 | Msa1083940:intron | 50.0% | |
| CCAATATCATGCCCTTCCAG+TGG | + | chr7_2:84241525-84241544 | None:intergenic | 50.0% | |
| ! | CCACTGGAAGGGCATGATAT+TGG | - | chr7_2:84241522-84241541 | Msa1083940:CDS | 50.0% |
| TAAGGCCACTTCCCTCCCAA+CGG | - | chr7_2:84240256-84240275 | Msa1083940:CDS | 55.0% | |
| GCTGCCCTCGGATTATCGAA+AGG | - | chr7_2:84240760-84240779 | Msa1083940:intron | 55.0% | |
| GGGCTGGGATATGTGGTGAT+TGG | - | chr7_2:84241194-84241213 | Msa1083940:intron | 55.0% | |
| CAGGGTCAGTTCCGAGACTT+TGG | + | chr7_2:84241467-84241486 | None:intergenic | 55.0% | |
| CAAAGTCTCGGAACTGACCC+TGG | - | chr7_2:84241465-84241484 | Msa1083940:CDS | 55.0% | |
| !! | GACCCTGGAGAGTTTGCTGT+TGG | - | chr7_2:84241480-84241499 | Msa1083940:CDS | 55.0% |
| TAAGGCCACTTCCCTCCCAA+CGG | - | chr7_2:84240256-84240275 | Msa1083940:CDS | 55.0% | |
| GCTGCCCTCGGATTATCGAA+AGG | - | chr7_2:84240760-84240779 | Msa1083940:intron | 55.0% | |
| GGGCTGGGATATGTGGTGAT+TGG | - | chr7_2:84241194-84241213 | Msa1083940:intron | 55.0% | |
| CAGGGTCAGTTCCGAGACTT+TGG | + | chr7_2:84241467-84241486 | None:intergenic | 55.0% | |
| CAAAGTCTCGGAACTGACCC+TGG | - | chr7_2:84241465-84241484 | Msa1083940:CDS | 55.0% | |
| !! | GACCCTGGAGAGTTTGCTGT+TGG | - | chr7_2:84241480-84241499 | Msa1083940:CDS | 55.0% |
| ACTCTCCGTTGGGAGGGAAG+TGG | + | chr7_2:84240264-84240283 | None:intergenic | 60.0% | |
| !! | GAAGGTGTTGAGGCTGCCCT+CGG | - | chr7_2:84240748-84240767 | Msa1083940:intron | 60.0% |
| ACTCTCCGTTGGGAGGGAAG+TGG | + | chr7_2:84240264-84240283 | None:intergenic | 60.0% | |
| !! | GAAGGTGTTGAGGCTGCCCT+CGG | - | chr7_2:84240748-84240767 | Msa1083940:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84240182 | 84241554 | 84240182 | ID=Msa1083940;Name=Msa1083940 |
| chr7_2 | mRNA | 84240182 | 84241554 | 84240182 | ID=Msa1083940-mRNA-1;Parent=Msa1083940;Name=Msa1083940-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.66|0.25|0.75|1|0.75|4|0|167 |
| chr7_2 | exon | 84240182 | 84240286 | 84240182 | ID=Msa1083940-mRNA-1:exon:22461;Parent=Msa1083940-mRNA-1 |
| chr7_2 | exon | 84240463 | 84240601 | 84240463 | ID=Msa1083940-mRNA-1:exon:22460;Parent=Msa1083940-mRNA-1 |
| chr7_2 | exon | 84240915 | 84241036 | 84240915 | ID=Msa1083940-mRNA-1:exon:22459;Parent=Msa1083940-mRNA-1 |
| chr7_2 | exon | 84241420 | 84241554 | 84241420 | ID=Msa1083940-mRNA-1:exon:22458;Parent=Msa1083940-mRNA-1 |
| chr7_2 | CDS | 84241420 | 84241554 | 84241420 | ID=Msa1083940-mRNA-1:cds;Parent=Msa1083940-mRNA-1 |
| chr7_2 | CDS | 84240915 | 84241036 | 84240915 | ID=Msa1083940-mRNA-1:cds;Parent=Msa1083940-mRNA-1 |
| chr7_2 | CDS | 84240463 | 84240601 | 84240463 | ID=Msa1083940-mRNA-1:cds;Parent=Msa1083940-mRNA-1 |
| chr7_2 | CDS | 84240182 | 84240286 | 84240182 | ID=Msa1083940-mRNA-1:cds;Parent=Msa1083940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
