Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376490 | XP_013461426.2 | 97.576 | 165 | 4 | 0 | 1 | 165 | 1 | 165 | 1.44e-113 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376490 | sp|Q8VZV9|PTA7_ARATH | 60.645 | 155 | 58 | 1 | 11 | 165 | 10 | 161 | 7.19e-67 | 203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376490 | A0A396IYW6 | 97.576 | 165 | 4 | 0 | 1 | 165 | 1 | 165 | 6.88e-114 | 329 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0376490 | 0.802592 | 5.215509e-49 | -8.615850e-47 |
| Msa0017980 | Msa0376490 | 0.804338 | 2.265982e-49 | -8.615850e-47 |
| Msa0034320 | Msa0376490 | 0.837647 | 4.594004e-57 | -8.615850e-47 |
| Msa0044380 | Msa0376490 | 0.827948 | 1.179843e-54 | -8.615850e-47 |
| Msa0045530 | Msa0376490 | 0.814444 | 1.535609e-51 | -8.615850e-47 |
| Msa0046090 | Msa0376490 | 0.813041 | 3.128720e-51 | -8.615850e-47 |
| Msa0049990 | Msa0376490 | 0.830132 | 3.488308e-55 | -8.615850e-47 |
| Msa0052550 | Msa0376490 | 0.811964 | 5.378492e-51 | -8.615850e-47 |
| Msa0054760 | Msa0376490 | 0.804377 | 2.223935e-49 | -8.615850e-47 |
| Msa0061320 | Msa0376490 | 0.841790 | 3.837975e-58 | -8.615850e-47 |
| Msa0077910 | Msa0376490 | 0.816988 | 4.162305e-52 | -8.615850e-47 |
| Msa0079530 | Msa0376490 | 0.811467 | 6.900620e-51 | -8.615850e-47 |
| Msa0081300 | Msa0376490 | 0.821851 | 3.240633e-53 | -8.615850e-47 |
| Msa0093830 | Msa0376490 | 0.802386 | 5.749671e-49 | -8.615850e-47 |
| Msa0094670 | Msa0376490 | 0.832286 | 1.030971e-55 | -8.615850e-47 |
| Msa0097730 | Msa0376490 | 0.806518 | 7.910644e-50 | -8.615850e-47 |
| Msa0115010 | Msa0376490 | 0.841514 | 4.538319e-58 | -8.615850e-47 |
| Msa0115950 | Msa0376490 | 0.810214 | 1.288529e-50 | -8.615850e-47 |
| Msa0125800 | Msa0376490 | 0.821016 | 5.051278e-53 | -8.615850e-47 |
| Msa0140330 | Msa0376490 | 0.833788 | 4.360337e-56 | -8.615850e-47 |
| Msa0144340 | Msa0376490 | 0.805794 | 1.123992e-49 | -8.615850e-47 |
| Msa0152380 | Msa0376490 | 0.826402 | 2.767381e-54 | -8.615850e-47 |
| Msa0164540 | Msa0376490 | 0.808764 | 2.638564e-50 | -8.615850e-47 |
| Msa0170440 | Msa0376490 | 0.818736 | 1.677246e-52 | -8.615850e-47 |
| Msa0173610 | Msa0376490 | 0.835664 | 1.471424e-56 | -8.615850e-47 |
| Msa0181010 | Msa0376490 | 0.836801 | 7.564417e-57 | -8.615850e-47 |
| Msa0183490 | Msa0376490 | 0.829014 | 6.524780e-55 | -8.615850e-47 |
| Msa0193000 | Msa0376490 | 0.859150 | 5.047051e-63 | -8.615850e-47 |
| Msa0213020 | Msa0376490 | 0.807809 | 4.215267e-50 | -8.615850e-47 |
| Msa0217300 | Msa0376490 | 0.810003 | 1.430261e-50 | -8.615850e-47 |
| Msa0217470 | Msa0376490 | 0.804993 | 1.654179e-49 | -8.615850e-47 |
| Msa0234930 | Msa0376490 | 0.817191 | 3.747689e-52 | -8.615850e-47 |
| Msa0235180 | Msa0376490 | 0.831369 | 1.736018e-55 | -8.615850e-47 |
| Msa0368430 | Msa0376490 | 0.821158 | 4.685704e-53 | -8.615850e-47 |
| Msa0370180 | Msa0376490 | 0.845297 | 4.434397e-59 | -8.615850e-47 |
| Msa0371870 | Msa0376490 | 0.828566 | 8.370648e-55 | -8.615850e-47 |
| Msa0375430 | Msa0376490 | 0.817296 | 3.549290e-52 | -8.615850e-47 |
| Msa0376490 | Msa0376760 | 0.830385 | 3.025073e-55 | -8.615850e-47 |
| Msa0376490 | Msa0379090 | 0.802159 | 6.403480e-49 | -8.615850e-47 |
| Msa0376490 | Msa0379110 | 0.808087 | 3.679063e-50 | -8.615850e-47 |
| Msa0376490 | Msa0379390 | 0.819329 | 1.229629e-52 | -8.615850e-47 |
| Msa0376490 | Msa0379450 | 0.814163 | 1.771661e-51 | -8.615850e-47 |
| Msa0376490 | Msa0380360 | 0.825260 | 5.163691e-54 | -8.615850e-47 |
| Msa0376490 | Msa0380520 | 0.835016 | 2.144663e-56 | -8.615850e-47 |
| Msa0376490 | Msa0386390 | 0.814947 | 1.188469e-51 | -8.615850e-47 |
| Msa0376490 | Msa0394330 | 0.813911 | 2.014086e-51 | -8.615850e-47 |
| Msa0376490 | Msa0396970 | 0.833661 | 4.691114e-56 | -8.615850e-47 |
| Msa0376490 | Msa0397000 | 0.829498 | 4.978375e-55 | -8.615850e-47 |
| Msa0376490 | Msa0403670 | 0.804858 | 1.765533e-49 | -8.615850e-47 |
| Msa0376490 | Msa0405040 | 0.801431 | 9.033030e-49 | -8.615850e-47 |
| Msa0376490 | Msa0415050 | 0.802555 | 5.306099e-49 | -8.615850e-47 |
| Msa0376490 | Msa0415460 | 0.825821 | 3.803208e-54 | -8.615850e-47 |
| Msa0376490 | Msa0420100 | 0.802605 | 5.182059e-49 | -8.615850e-47 |
| Msa0376490 | Msa0426480 | 0.819326 | 1.231799e-52 | -8.615850e-47 |
| Msa0376490 | Msa0430020 | 0.834149 | 3.541439e-56 | -8.615850e-47 |
| Msa0376490 | Msa0432390 | 0.803391 | 3.564672e-49 | -8.615850e-47 |
| Msa0376490 | Msa0444340 | 0.804921 | 1.712800e-49 | -8.615850e-47 |
| Msa0376490 | Msa0446480 | 0.846247 | 2.449255e-59 | -8.615850e-47 |
| Msa0376490 | Msa0455200 | 0.816027 | 6.831735e-52 | -8.615850e-47 |
| Msa0376490 | Msa0458110 | 0.804112 | 2.525323e-49 | -8.615850e-47 |
| Msa0376490 | Msa0466070 | 0.814139 | 1.793330e-51 | -8.615850e-47 |
| Msa0376490 | Msa0466340 | 0.830821 | 2.366599e-55 | -8.615850e-47 |
| Msa0376490 | Msa0471700 | 0.832363 | 9.864226e-56 | -8.615850e-47 |
| Msa0376490 | Msa0473010 | 0.811200 | 7.885740e-51 | -8.615850e-47 |
| Msa0376490 | Msa0479790 | 0.811275 | 7.595921e-51 | -8.615850e-47 |
| Msa0376490 | Msa0482960 | 0.823221 | 1.556295e-53 | -8.615850e-47 |
| Msa0376490 | Msa0489620 | 0.821467 | 3.975268e-53 | -8.615850e-47 |
| Msa0376490 | Msa0492000 | 0.833096 | 6.487359e-56 | -8.615850e-47 |
| Msa0376490 | Msa0503120 | 0.818748 | 1.667337e-52 | -8.615850e-47 |
| Msa0376490 | Msa0512130 | 0.834295 | 3.255720e-56 | -8.615850e-47 |
| Msa0376490 | Msa0515830 | 0.801487 | 8.797376e-49 | -8.615850e-47 |
| Msa0376490 | Msa0528170 | 0.805986 | 1.023922e-49 | -8.615850e-47 |
| Msa0376490 | Msa0539320 | 0.805202 | 1.495557e-49 | -8.615850e-47 |
| Msa0376490 | Msa0547780 | 0.821459 | 3.993691e-53 | -8.615850e-47 |
| Msa0376490 | Msa0550280 | 0.802488 | 5.478926e-49 | -8.615850e-47 |
| Msa0376490 | Msa0552670 | 0.819272 | 1.267166e-52 | -8.615850e-47 |
| Msa0376490 | Msa0553350 | 0.837077 | 6.429223e-57 | -8.615850e-47 |
| Msa0376490 | Msa0562040 | 0.800052 | 1.726600e-48 | -8.615850e-47 |
| Msa0376490 | Msa0581190 | 0.810228 | 1.279696e-50 | -8.615850e-47 |
| Msa0376490 | Msa0581490 | 0.805225 | 1.479359e-49 | -8.615850e-47 |
| Msa0376490 | Msa0621870 | 0.802710 | 4.930732e-49 | -8.615850e-47 |
| Msa0376490 | Msa0624220 | 0.811360 | 7.279893e-51 | -8.615850e-47 |
| Msa0376490 | Msa0635130 | 0.808313 | 3.293946e-50 | -8.615850e-47 |
| Msa0376490 | Msa0639420 | 0.816704 | 4.820252e-52 | -8.615850e-47 |
| Msa0376490 | Msa0646710 | 0.806071 | 9.829195e-50 | -8.615850e-47 |
| Msa0376490 | Msa0647110 | 0.803948 | 2.731757e-49 | -8.615850e-47 |
| Msa0376490 | Msa0647710 | 0.824011 | 1.017136e-53 | -8.615850e-47 |
| Msa0376490 | Msa0659130 | 0.800607 | 1.331624e-48 | -8.615850e-47 |
| Msa0376490 | Msa0661490 | 0.813150 | 2.960620e-51 | -8.615850e-47 |
| Msa0376490 | Msa0688760 | 0.811554 | 6.606902e-51 | -8.615850e-47 |
| Msa0376490 | Msa0690530 | 0.813710 | 2.230136e-51 | -8.615850e-47 |
| Msa0376490 | Msa0702120 | 0.809420 | 1.908758e-50 | -8.615850e-47 |
| Msa0376490 | Msa0704570 | 0.805853 | 1.092321e-49 | -8.615850e-47 |
| Msa0376490 | Msa0710950 | 0.802273 | 6.067227e-49 | -8.615850e-47 |
| Msa0376490 | Msa0716430 | 0.801370 | 9.298673e-49 | -8.615850e-47 |
| Msa0376490 | Msa0720380 | 0.835370 | 1.745638e-56 | -8.615850e-47 |
| Msa0376490 | Msa0732100 | 0.808765 | 2.637216e-50 | -8.615850e-47 |
| Msa0376490 | Msa0748890 | 0.815721 | 7.994706e-52 | -8.615850e-47 |
| Msa0376490 | Msa0752290 | 0.807652 | 4.553606e-50 | -8.615850e-47 |
| Msa0376490 | Msa0760950 | 0.862274 | 5.690333e-64 | -8.615850e-47 |
| Msa0376490 | Msa0766540 | 0.806312 | 8.746074e-50 | -8.615850e-47 |
| Msa0376490 | Msa0790830 | 0.800472 | 1.418540e-48 | -8.615850e-47 |
| Msa0376490 | Msa0803220 | 0.825420 | 4.732737e-54 | -8.615850e-47 |
| Msa0376490 | Msa0829570 | 0.831042 | 2.089039e-55 | -8.615850e-47 |
| Msa0376490 | Msa0833630 | 0.832616 | 8.541254e-56 | -8.615850e-47 |
| Msa0376490 | Msa0841570 | 0.802797 | 4.731213e-49 | -8.615850e-47 |
| Msa0376490 | Msa0846180 | 0.801345 | 9.409780e-49 | -8.615850e-47 |
| Msa0376490 | Msa0866650 | 0.824428 | 8.117304e-54 | -8.615850e-47 |
| Msa0376490 | Msa0873830 | 0.800939 | 1.138878e-48 | -8.615850e-47 |
| Msa0376490 | Msa0881050 | 0.855034 | 8.269452e-62 | -8.615850e-47 |
| Msa0376490 | Msa0901140 | 0.851465 | 8.721961e-61 | -8.615850e-47 |
| Msa0376490 | Msa0926090 | 0.849513 | 3.082534e-60 | -8.615850e-47 |
| Msa0376490 | Msa0968450 | 0.806221 | 9.139670e-50 | -8.615850e-47 |
| Msa0376490 | Msa0970120 | 0.807868 | 4.095618e-50 | -8.615850e-47 |
| Msa0376490 | Msa0972730 | 0.811382 | 7.201017e-51 | -8.615850e-47 |
| Msa0376490 | Msa1002980 | 0.835823 | 1.340366e-56 | -8.615850e-47 |
| Msa0376490 | Msa1026880 | 0.807735 | 4.371370e-50 | -8.615850e-47 |
| Msa0376490 | Msa1031650 | 0.812350 | 4.431794e-51 | -8.615850e-47 |
| Msa0376490 | Msa1067430 | 0.840258 | 9.689792e-58 | -8.615850e-47 |
| Msa0376490 | Msa1074630 | 0.801524 | 8.645524e-49 | -8.615850e-47 |
| Msa0376490 | Msa1081850 | 0.815658 | 8.258809e-52 | -8.615850e-47 |
| Msa0376490 | Msa1116010 | 0.800477 | 1.415082e-48 | -8.615850e-47 |
| Msa0376490 | Msa1126910 | 0.822570 | 2.207242e-53 | -8.615850e-47 |
| Msa0376490 | Msa1130070 | 0.809872 | 1.526285e-50 | -8.615850e-47 |
| Msa0376490 | Msa1132820 | 0.837157 | 6.133166e-57 | -8.615850e-47 |
| Msa0376490 | Msa1149760 | 0.806308 | 8.760167e-50 | -8.615850e-47 |
| Msa0376490 | Msa1150170 | 0.802934 | 4.432622e-49 | -8.615850e-47 |
| Msa0376490 | Msa1154130 | 0.809575 | 1.768218e-50 | -8.615850e-47 |
| Msa0376490 | Msa1162470 | 0.818275 | 2.133869e-52 | -8.615850e-47 |
| Msa0376490 | Msa1166020 | 0.808085 | 3.682519e-50 | -8.615850e-47 |
| Msa0376490 | Msa1167160 | 0.800392 | 1.472763e-48 | -8.615850e-47 |
| Msa0376490 | Msa1183610 | 0.808455 | 3.070571e-50 | -8.615850e-47 |
| Msa0376490 | Msa1208630 | 0.815764 | 7.819887e-52 | -8.615850e-47 |
| Msa0376490 | Msa1208750 | 0.837625 | 4.655941e-57 | -8.615850e-47 |
| Msa0376490 | Msa1214900 | 0.816493 | 5.375018e-52 | -8.615850e-47 |
| Msa0376490 | Msa1222390 | 0.837988 | 3.754208e-57 | -8.615850e-47 |
| Msa0376490 | Msa1223600 | 0.817041 | 4.050747e-52 | -8.615850e-47 |
| Msa0376490 | Msa1226360 | 0.804638 | 1.962496e-49 | -8.615850e-47 |
| Msa0376490 | Msa1228950 | 0.826124 | 3.221531e-54 | -8.615850e-47 |
| Msa0376490 | Msa1236090 | 0.802577 | 5.252378e-49 | -8.615850e-47 |
| Msa0376490 | Msa1258770 | 0.820364 | 7.133227e-53 | -8.615850e-47 |
| Msa0376490 | Msa1263460 | 0.805858 | 1.089376e-49 | -8.615850e-47 |
| Msa0376490 | Msa1265990 | 0.812059 | 5.129495e-51 | -8.615850e-47 |
| Msa0376490 | Msa1298740 | 0.814934 | 1.196460e-51 | -8.615850e-47 |
| Msa0376490 | Msa1305650 | 0.800562 | 1.359441e-48 | -8.615850e-47 |
| Msa0376490 | Msa1330280 | 0.813016 | 3.167427e-51 | -8.615850e-47 |
| Msa0376490 | Msa1331490 | 0.810963 | 8.873534e-51 | -8.615850e-47 |
| Msa0376490 | Msa1331900 | 0.816881 | 4.400670e-52 | -8.615850e-47 |
| Msa0376490 | Msa1339250 | 0.802962 | 4.373920e-49 | -8.615850e-47 |
| Msa0376490 | Msa1344430 | 0.816937 | 4.274505e-52 | -8.615850e-47 |
| Msa0376490 | Msa1344940 | 0.820138 | 8.034325e-53 | -8.615850e-47 |
| Msa0376490 | Msa1349170 | 0.808941 | 2.418147e-50 | -8.615850e-47 |
| Msa0376490 | Msa1356680 | 0.813656 | 2.291692e-51 | -8.615850e-47 |
| Msa0376490 | Msa1361090 | 0.814703 | 1.345782e-51 | -8.615850e-47 |
| Msa0376490 | Msa1366400 | 0.836206 | 1.071684e-56 | -8.615850e-47 |
| Msa0376490 | Msa1368730 | 0.818296 | 2.111105e-52 | -8.615850e-47 |
| Msa0376490 | Msa1369900 | 0.801182 | 1.015691e-48 | -8.615850e-47 |
| Msa0376490 | Msa1371690 | 0.815066 | 1.118278e-51 | -8.615850e-47 |
| Msa0376490 | Msa1373340 | 0.825899 | 3.644347e-54 | -8.615850e-47 |
| Msa0376490 | Msa1374810 | 0.816007 | 6.903649e-52 | -8.615850e-47 |
| Msa0376490 | Msa1374850 | 0.827670 | 1.376373e-54 | -8.615850e-47 |
| Msa0376490 | Msa1376230 | 0.814236 | 1.707062e-51 | -8.615850e-47 |
| Msa0376490 | Msa1387650 | 0.801649 | 8.148903e-49 | -8.615850e-47 |
| Msa0376490 | Msa1393200 | 0.811805 | 5.825519e-51 | -8.615850e-47 |
| Msa0376490 | Msa1393720 | 0.802353 | 5.839737e-49 | -8.615850e-47 |
| Msa0376490 | Msa1396310 | 0.803149 | 4.000231e-49 | -8.615850e-47 |
| Msa0376490 | Msa1406550 | 0.859534 | 3.870185e-63 | -8.615850e-47 |
| Msa0376490 | Msa1406880 | 0.815168 | 1.061327e-51 | -8.615850e-47 |
| Msa0376490 | Msa1410170 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0376490 | Msa1412750 | 0.805594 | 1.238000e-49 | -8.615850e-47 |
| Msa0376490 | Msa1415250 | 0.840686 | 7.486878e-58 | -8.615850e-47 |
| Msa0376490 | Msa1416460 | 0.833948 | 3.976590e-56 | -8.615850e-47 |
| Msa0376490 | Msa1422490 | 0.841636 | 4.214526e-58 | -8.615850e-47 |
| Msa0376490 | Msa1423550 | 0.801126 | 1.042868e-48 | -8.615850e-47 |
| Msa0376490 | Msa1427020 | 0.811145 | 8.104903e-51 | -8.615850e-47 |
| Msa0376490 | Msa1428990 | 0.814351 | 1.610217e-51 | -8.615850e-47 |
| Msa0376490 | Msa1432350 | 0.812175 | 4.839345e-51 | -8.615850e-47 |
| Msa0376490 | Msa1432470 | 0.813684 | 2.259471e-51 | -8.615850e-47 |
| Msa0376490 | Msa1438380 | 0.814109 | 1.821647e-51 | -8.615850e-47 |
| Msa0376490 | Msa1439800 | 0.807474 | 4.965430e-50 | -8.615850e-47 |
| Msa0376490 | Msa1444090 | 0.824231 | 9.026503e-54 | -8.615850e-47 |
| Msa0376490 | Msa1449320 | 0.820464 | 6.763982e-53 | -8.615850e-47 |
| Msa0376490 | Msa1449510 | 0.818941 | 1.506767e-52 | -8.615850e-47 |
| Msa0376490 | Msa1449680 | 0.835046 | 2.106909e-56 | -8.615850e-47 |
| Msa0376490 | Msa1451840 | 0.810763 | 9.804829e-51 | -8.615850e-47 |
| Msa0376490 | Msa1458330 | 0.815462 | 9.132281e-52 | -8.615850e-47 |
| Msa0376490 | Msa1459590 | 0.838304 | 3.113975e-57 | -8.615850e-47 |
| Msa0376490 | Msa1464800 | 0.828097 | 1.086584e-54 | -8.615850e-47 |
| Msa0258380 | Msa0376490 | 0.802527 | 5.377494e-49 | -8.615850e-47 |
| Msa0258410 | Msa0376490 | 0.813146 | 2.967283e-51 | -8.615850e-47 |
| Msa0269830 | Msa0376490 | 0.832853 | 7.459398e-56 | -8.615850e-47 |
| Msa0273270 | Msa0376490 | 0.820116 | 8.131480e-53 | -8.615850e-47 |
| Msa0280120 | Msa0376490 | 0.832682 | 8.221658e-56 | -8.615850e-47 |
| Msa0280140 | Msa0376490 | 0.816865 | 4.436543e-52 | -8.615850e-47 |
| Msa0284980 | Msa0376490 | 0.809899 | 1.505901e-50 | -8.615850e-47 |
| Msa0285740 | Msa0376490 | 0.814345 | 1.614923e-51 | -8.615850e-47 |
| Msa0288360 | Msa0376490 | 0.805772 | 1.135960e-49 | -8.615850e-47 |
| Msa0305810 | Msa0376490 | 0.809680 | 1.678714e-50 | -8.615850e-47 |
| Msa0313800 | Msa0376490 | 0.843412 | 1.424016e-58 | -8.615850e-47 |
| Msa0321230 | Msa0376490 | 0.817739 | 2.819979e-52 | -8.615850e-47 |
| Msa0327900 | Msa0376490 | 0.841513 | 4.541206e-58 | -8.615850e-47 |
| Msa0334780 | Msa0376490 | 0.817840 | 2.676789e-52 | -8.615850e-47 |
| Msa0335740 | Msa0376490 | 0.809440 | 1.889936e-50 | -8.615850e-47 |
| Msa0341710 | Msa0376490 | 0.805394 | 1.363754e-49 | -8.615850e-47 |
| Msa0342620 | Msa0376490 | 0.818516 | 1.881541e-52 | -8.615850e-47 |
| Msa0352200 | Msa0376490 | 0.816915 | 4.323507e-52 | -8.615850e-47 |
| Msa0362840 | Msa0376490 | 0.832550 | 8.866746e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376490 | MtrunA17_Chr3g0127071 | 97.576 | 165 | 4 | 0 | 1 | 165 | 1 | 165 | 1.32e-117 | 329 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376490 | AT5G24314.1 | 60.645 | 155 | 58 | 1 | 11 | 165 | 10 | 161 | 7.31e-68 | 203 |
| Msa0376490 | AT5G24314.2 | 57.669 | 163 | 58 | 2 | 11 | 165 | 10 | 169 | 1.32e-65 | 198 |
Find 51 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTCGAAGAGAGAGTAAA+TGG | 0.213475 | 3_1:+76600775 | None:intergenic |
| CACCACTTTCCTTTCGCATT+TGG | 0.243431 | 3_1:+76600523 | None:intergenic |
| TTAAGCTGAGAAGTTACATT+AGG | 0.313808 | 3_1:-76598686 | Msa0376490:three_prime_UTR |
| TGATTCTCTGCCCTACAAAA+TGG | 0.340113 | 3_1:-76599027 | Msa0376490:CDS |
| AATATGGAGGCGAAGGAAAA+TGG | 0.348814 | 3_1:-76600493 | Msa0376490:intron |
| TAAGCTGAGAAGTTACATTA+GGG | 0.405174 | 3_1:-76598685 | Msa0376490:three_prime_UTR |
| GAGTCTGATCCCTTCAAACC+TGG | 0.410327 | 3_1:-76598756 | Msa0376490:CDS |
| AGCTGGTGTTTACTGAACTT+TGG | 0.420425 | 3_1:+76600816 | None:intergenic |
| TGAGGGAAAACTCTTGCAAT+TGG | 0.438639 | 3_1:-76598961 | Msa0376490:CDS |
| AAAGTGGTGGACGAAGAATA+TGG | 0.452551 | 3_1:-76600509 | Msa0376490:CDS |
| GGAGCAGGTGAGGAAGATAA+AGG | 0.452829 | 3_1:-76598985 | Msa0376490:CDS |
| TCAGACTCGGCATACGCCTC+TGG | 0.453063 | 3_1:+76598771 | None:intergenic |
| CTCACCTGCTCCTCGAGAAA+AGG | 0.458089 | 3_1:+76598996 | None:intergenic |
| TAATTCCGTATCTTGTGTAC+TGG | 0.458460 | 3_1:-76598553 | Msa0376490:three_prime_UTR |
| ATAATGAGGCCCAGGTTTGA+AGG | 0.480274 | 3_1:+76598746 | None:intergenic |
| GAGAGCAACATGGATGAGTA+TGG | 0.481625 | 3_1:-76598858 | Msa0376490:CDS |
| GGTGAGGAAGATAAAGGATG+AGG | 0.481739 | 3_1:-76598979 | Msa0376490:CDS |
| CGCCTCTGGACGGTAAAATC+CGG | 0.489373 | 3_1:+76598785 | None:intergenic |
| ATTACTCAAAACATGAAGAA+TGG | 0.511919 | 3_1:+76598821 | None:intergenic |
| GCGAGTTAACACTCAGGCTC+GGG | 0.512462 | 3_1:+76600639 | None:intergenic |
| TGCGAGTTAACACTCAGGCT+CGG | 0.517311 | 3_1:+76600638 | None:intergenic |
| TAAAACTCTTTCAAATAATG+AGG | 0.525568 | 3_1:+76598732 | None:intergenic |
| GATTATTCGTTCAAGAATCG+TGG | 0.525884 | 3_1:-76600925 | None:intergenic |
| AATTAAGAGCTGGAAATTCA+CGG | 0.537023 | 3_1:-76600664 | Msa0376490:CDS |
| AAGTCGAAGAGAGAGTAAAT+GGG | 0.538130 | 3_1:+76600776 | None:intergenic |
| TCTTTCAAATAATGAGGCCC+AGG | 0.542211 | 3_1:+76598738 | None:intergenic |
| AGTAATCGAGTGAATGATGC+CGG | 0.544993 | 3_1:-76598804 | Msa0376490:CDS |
| GTGAGGAAGATAAAGGATGA+GGG | 0.559910 | 3_1:-76598978 | Msa0376490:CDS |
| TAATGAGGCCCAGGTTTGAA+GGG | 0.566321 | 3_1:+76598747 | None:intergenic |
| CAGAAGATAGAATTAAGAGC+TGG | 0.569406 | 3_1:-76600674 | Msa0376490:CDS |
| GACGAAGAATATGGAGGCGA+AGG | 0.570823 | 3_1:-76600500 | Msa0376490:CDS |
| AGTCTGATCCCTTCAAACCT+GGG | 0.572137 | 3_1:-76598755 | Msa0376490:CDS |
| AGTTCAGTAAACACCAGCTA+TGG | 0.573218 | 3_1:-76600812 | Msa0376490:exon |
| ATTATTCGTTCAAGAATCGT+GGG | 0.573686 | 3_1:-76600924 | None:intergenic |
| GAGCCTGAGTGTTAACTCGC+AGG | 0.575752 | 3_1:-76600636 | Msa0376490:intron |
| TTTACGCGGAGAGCCATAGC+TGG | 0.585067 | 3_1:+76600799 | None:intergenic |
| TCTTGCAATTGGACATAGAG+AGG | 0.595233 | 3_1:-76598950 | Msa0376490:CDS |
| ATCCAAATGCGAAAGGAAAG+TGG | 0.601949 | 3_1:-76600525 | Msa0376490:CDS |
| AGGTTTGAAGGGATCAGACT+CGG | 0.605147 | 3_1:+76598758 | None:intergenic |
| GTTGCTCTCAACATAAGCGT+TGG | 0.607357 | 3_1:+76598872 | None:intergenic |
| CGCTTATGTTGAGAGCAACA+TGG | 0.607844 | 3_1:-76598868 | Msa0376490:CDS |
| AGAAGGGGCTATTAAATGAG+AGG | 0.613125 | 3_1:+76598488 | None:intergenic |
| TGTGAATGAGATAGCAGCTG+AGG | 0.626703 | 3_1:-76598895 | Msa0376490:CDS |
| GATGGTAATCCAAATGCGAA+AGG | 0.635273 | 3_1:-76600532 | Msa0376490:CDS |
| ACTCGGCATACGCCTCTGGA+CGG | 0.681095 | 3_1:+76598775 | None:intergenic |
| AGAGAGTAAATGGGTTTACG+CGG | 0.685156 | 3_1:+76600785 | None:intergenic |
| CAAATGCGAAAGGAAAGTGG+TGG | 0.689015 | 3_1:-76600522 | Msa0376490:CDS |
| TGCATGCATACAAACAACAG+CGG | 0.719288 | 3_1:+76598600 | None:intergenic |
| ATACCTGCGAGTTAACACTC+AGG | 0.734021 | 3_1:+76600633 | None:intergenic |
| AGCAACATGGATGAGTATGG+AGG | 0.751548 | 3_1:-76598855 | Msa0376490:CDS |
| GTGGTGGACGAAGAATATGG+AGG | 0.759179 | 3_1:-76600506 | Msa0376490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTACGATTATTATTT+GGG | + | chr3_1:76598951-76598970 | None:intergenic | 10.0% |
| !!! | TTTATTTTACGATTATTATT+TGG | + | chr3_1:76598952-76598971 | None:intergenic | 10.0% |
| !!! | GGAATTTTCTATATAATATT+TGG | + | chr3_1:76598480-76598499 | None:intergenic | 15.0% |
| !!! | TAATTCTAATATTCTAAAGT+TGG | - | chr3_1:76599213-76599232 | Msa0376490:intron | 15.0% |
| !! | CTTATCTCAAAAACTTATAA+AGG | + | chr3_1:76598501-76598520 | None:intergenic | 20.0% |
| !!! | CTTTATAAGTTTTTGAGATA+AGG | - | chr3_1:76598499-76598518 | Msa0376490:three_prime_UTR | 20.0% |
| !!! | ATTAAATATATCTAGCTTGA+AGG | - | chr3_1:76599089-76599108 | Msa0376490:intron | 20.0% |
| !!! | TTAAATATATCTAGCTTGAA+GGG | - | chr3_1:76599090-76599109 | Msa0376490:intron | 20.0% |
| !! | AAATGTTATAGCTGTTAATT+TGG | + | chr3_1:76599360-76599379 | None:intergenic | 20.0% |
| !!! | ACACTACTTGTTTTTTTTTT+TGG | + | chr3_1:76599510-76599529 | None:intergenic | 20.0% |
| !! | GACACAAATCAAATTTAATT+TGG | + | chr3_1:76600015-76600034 | None:intergenic | 20.0% |
| !! | TAAAACTCTTTCAAATAATG+AGG | + | chr3_1:76600613-76600632 | None:intergenic | 20.0% |
| !! | AGAAAAATATCAAATCAGAA+GGG | + | chr3_1:76600873-76600892 | None:intergenic | 20.0% |
| ! | AAGAAAGATATGAACATTAC+AGG | + | chr3_1:76598594-76598613 | None:intergenic | 25.0% |
| !!! | TTGATTTTGAAGTAACAGTT+TGG | + | chr3_1:76598636-76598655 | None:intergenic | 25.0% |
| ! | AATTTATACAAACAGGTAAG+AGG | + | chr3_1:76598927-76598946 | None:intergenic | 25.0% |
| ! | TTTGGGAAATTTATACAAAC+AGG | + | chr3_1:76598934-76598953 | None:intergenic | 25.0% |
| !!! | TATTCTAAAGTTGGAAAGTT+AGG | - | chr3_1:76599222-76599241 | Msa0376490:intron | 25.0% |
| !!! | ATTCTAAAGTTGGAAAGTTA+GGG | - | chr3_1:76599223-76599242 | Msa0376490:intron | 25.0% |
| ! | ATTTATTGGATTGCATGTTA+CGG | - | chr3_1:76599277-76599296 | Msa0376490:intron | 25.0% |
| !!! | AAATGTTTTGGGTTAAAATG+TGG | - | chr3_1:76599845-76599864 | Msa0376490:intron | 25.0% |
| ! | TTGATTGAATGAATGCATAA+TGG | - | chr3_1:76600183-76600202 | Msa0376490:intron | 25.0% |
| !! | CTTAAATATTCAAGTTCATC+GGG | + | chr3_1:76600263-76600282 | None:intergenic | 25.0% |
| !! | GCTTAAATATTCAAGTTCAT+CGG | + | chr3_1:76600264-76600283 | None:intergenic | 25.0% |
| ! | ATTACTCAAAACATGAAGAA+TGG | + | chr3_1:76600524-76600543 | None:intergenic | 25.0% |
| ! | GAAAAATATCAAATCAGAAG+GGG | + | chr3_1:76600872-76600891 | None:intergenic | 25.0% |
| ! | GAGAAAAATATCAAATCAGA+AGG | + | chr3_1:76600874-76600893 | None:intergenic | 25.0% |
| AATTAAGAGCTGGAAATTCA+CGG | - | chr3_1:76598678-76598697 | Msa0376490:three_prime_UTR | 30.0% | |
| GGTTAGGAAGAATTTATGTT+GGG | - | chr3_1:76599111-76599130 | Msa0376490:intron | 30.0% | |
| AGAATTTATGTTGGGACATT+AGG | - | chr3_1:76599119-76599138 | Msa0376490:intron | 30.0% | |
| ! | AGTTTAAAACCTTTCCTTTC+CGG | + | chr3_1:76599191-76599210 | None:intergenic | 30.0% |
| !! | TTCTAAAGTTGGAAAGTTAG+GGG | - | chr3_1:76599224-76599243 | Msa0376490:intron | 30.0% |
| TCTAGTGATGTGATTCATTA+AGG | - | chr3_1:76599577-76599596 | Msa0376490:intron | 30.0% | |
| ATTCATTAAGGAACACGATA+AGG | - | chr3_1:76599589-76599608 | Msa0376490:intron | 30.0% | |
| TTCATTAAGGAACACGATAA+GGG | - | chr3_1:76599590-76599609 | Msa0376490:intron | 30.0% | |
| ! | TCCTTTTATATATCCTCTCT+TGG | + | chr3_1:76599652-76599671 | None:intergenic | 30.0% |
| TGATATCATGCAAAACAACA+GGG | + | chr3_1:76599717-76599736 | None:intergenic | 30.0% | |
| ACATTTAGACATTGGGTATA+TGG | + | chr3_1:76599831-76599850 | None:intergenic | 30.0% | |
| ! | TACCCAATGTCTAAATGTTT+TGG | - | chr3_1:76599833-76599852 | Msa0376490:intron | 30.0% |
| ! | ACCCAATGTCTAAATGTTTT+GGG | - | chr3_1:76599834-76599853 | Msa0376490:intron | 30.0% |
| ACCCAAAACATTTAGACATT+GGG | + | chr3_1:76599838-76599857 | None:intergenic | 30.0% | |
| AACCCAAAACATTTAGACAT+TGG | + | chr3_1:76599839-76599858 | None:intergenic | 30.0% | |
| TTGCAAAAAATGCTTTCATG+TGG | - | chr3_1:76599979-76599998 | Msa0376490:intron | 30.0% | |
| ! | CATTTTGCTGCAGATAAAAA+AGG | - | chr3_1:76600291-76600310 | Msa0376490:intron | 30.0% |
| TTAAGCTGAGAAGTTACATT+AGG | - | chr3_1:76600656-76600675 | Msa0376490:CDS | 30.0% | |
| TAAGCTGAGAAGTTACATTA+GGG | - | chr3_1:76600657-76600676 | Msa0376490:CDS | 30.0% | |
| ! | TTTTTCCAGTACACAAGATA+CGG | + | chr3_1:76600797-76600816 | None:intergenic | 30.0% |
| AAGTCGAAGAGAGAGTAAAT+GGG | + | chr3_1:76598569-76598588 | None:intergenic | 35.0% | |
| AAAGTCGAAGAGAGAGTAAA+TGG | + | chr3_1:76598570-76598589 | None:intergenic | 35.0% | |
| CAGAAGATAGAATTAAGAGC+TGG | - | chr3_1:76598668-76598687 | Msa0376490:three_prime_UTR | 35.0% | |
| ACATTGTGAGACAAGAAAGA+TGG | + | chr3_1:76598887-76598906 | None:intergenic | 35.0% | |
| ACTTTCTCAGTAGTTAGTAG+TGG | - | chr3_1:76599039-76599058 | Msa0376490:CDS | 35.0% | |
| ! | TATATCTAGCTTGAAGGGTT+AGG | - | chr3_1:76599095-76599114 | Msa0376490:intron | 35.0% |
| GGGTTAGGAAGAATTTATGT+TGG | - | chr3_1:76599110-76599129 | Msa0376490:intron | 35.0% | |
| ACATTAGGCTCAATACAAAG+AGG | - | chr3_1:76599134-76599153 | Msa0376490:intron | 35.0% | |
| ! | TTTGTCGTGGATGGATTTAT+TGG | - | chr3_1:76599263-76599282 | Msa0376490:intron | 35.0% |
| CGATCTGGATTATAGATTTG+TGG | - | chr3_1:76599330-76599349 | Msa0376490:intron | 35.0% | |
| ! | ATTTGTGATGTGATGATGCA+AGG | - | chr3_1:76599376-76599395 | Msa0376490:intron | 35.0% |
| ! | TTTGTGATGTGATGATGCAA+GGG | - | chr3_1:76599377-76599396 | Msa0376490:intron | 35.0% |
| GCCAAGAGAGGATATATAAA+AGG | - | chr3_1:76599648-76599667 | Msa0376490:intron | 35.0% | |
| GTGATATCATGCAAAACAAC+AGG | + | chr3_1:76599718-76599737 | None:intergenic | 35.0% | |
| CAGCAACTACAACAACATAA+AGG | + | chr3_1:76599784-76599803 | None:intergenic | 35.0% | |
| TATGTTGTTGTAGTTGCTGT+TGG | - | chr3_1:76599785-76599804 | Msa0376490:intron | 35.0% | |
| GTCTTTGCTTCTTTCTATCA+TGG | - | chr3_1:76600032-76600051 | Msa0376490:intron | 35.0% | |
| TGAGACATATACCAGATACT+GGG | + | chr3_1:76600072-76600091 | None:intergenic | 35.0% | |
| !! | ATTTTGATGCCATAGTGAAG+TGG | - | chr3_1:76600118-76600137 | Msa0376490:intron | 35.0% |
| TGAATGCATAATGGTTATGC+TGG | - | chr3_1:76600192-76600211 | Msa0376490:intron | 35.0% | |
| ATGATTCATGCTATTGACAC+AGG | - | chr3_1:76600220-76600239 | Msa0376490:intron | 35.0% | |
| TAATTCCGTATCTTGTGTAC+TGG | - | chr3_1:76600789-76600808 | Msa0376490:CDS | 35.0% | |
| AGCTGGTGTTTACTGAACTT+TGG | + | chr3_1:76598529-76598548 | None:intergenic | 40.0% | |
| AGTTCAGTAAACACCAGCTA+TGG | - | chr3_1:76598530-76598549 | Msa0376490:three_prime_UTR | 40.0% | |
| ! | AGAGAGTAAATGGGTTTACG+CGG | + | chr3_1:76598560-76598579 | None:intergenic | 40.0% |
| CATGCATTTGTTCTGCAAGA+TGG | - | chr3_1:76598792-76598811 | Msa0376490:CDS | 40.0% | |
| GATGGTAATCCAAATGCGAA+AGG | - | chr3_1:76598810-76598829 | Msa0376490:CDS | 40.0% | |
| ATCCAAATGCGAAAGGAAAG+TGG | - | chr3_1:76598817-76598836 | Msa0376490:CDS | 40.0% | |
| !! | AAAGTGGTGGACGAAGAATA+TGG | - | chr3_1:76598833-76598852 | Msa0376490:CDS | 40.0% |
| AATATGGAGGCGAAGGAAAA+TGG | - | chr3_1:76598849-76598868 | Msa0376490:CDS | 40.0% | |
| TTTCCGGAAAATGAGCAAAC+GGG | + | chr3_1:76599175-76599194 | None:intergenic | 40.0% | |
| CTTTCCGGAAAATGAGCAAA+CGG | + | chr3_1:76599176-76599195 | None:intergenic | 40.0% | |
| AGAGGTTAAAGAGTTTGTCG+TGG | - | chr3_1:76599250-76599269 | Msa0376490:intron | 40.0% | |
| GTTAAAGAGTTTGTCGTGGA+TGG | - | chr3_1:76599254-76599273 | Msa0376490:intron | 40.0% | |
| GTGAAACAGAATTAGCGATC+TGG | - | chr3_1:76599315-76599334 | Msa0376490:intron | 40.0% | |
| ! | GTGATGATGCAAGGGATTAT+TGG | - | chr3_1:76599385-76599404 | Msa0376490:intron | 40.0% |
| TGATGCAAGGGATTATTGGA+AGG | - | chr3_1:76599389-76599408 | Msa0376490:intron | 40.0% | |
| ! | AATTGCAATGTGTTGCTGCA+AGG | - | chr3_1:76599470-76599489 | Msa0376490:intron | 40.0% |
| AAGGAACACGATAAGGGAAA+AGG | - | chr3_1:76599596-76599615 | Msa0376490:intron | 40.0% | |
| CAACATAAAGGTCACATGCA+TGG | + | chr3_1:76599772-76599791 | None:intergenic | 40.0% | |
| AGTCTAGTGTGATCATTCCT+CGG | - | chr3_1:76599896-76599915 | Msa0376490:intron | 40.0% | |
| AACAACAGTTGGGTCATTAG+GGG | + | chr3_1:76599924-76599943 | None:intergenic | 40.0% | |
| CAACAACAGTTGGGTCATTA+GGG | + | chr3_1:76599925-76599944 | None:intergenic | 40.0% | |
| GTTCATATCGACAAACACCT+CGG | + | chr3_1:76599951-76599970 | None:intergenic | 40.0% | |
| ACATATACCAGATACTGGGA+CGG | + | chr3_1:76600068-76600087 | None:intergenic | 40.0% | |
| GTGAGACATATACCAGATAC+TGG | + | chr3_1:76600073-76600092 | None:intergenic | 40.0% | |
| ATGTGCATACCACTTCACTA+TGG | + | chr3_1:76600130-76600149 | None:intergenic | 40.0% | |
| TGATTCTCTGCCCTACAAAA+TGG | - | chr3_1:76600315-76600334 | Msa0376490:intron | 40.0% | |
| GTGAGGAAGATAAAGGATGA+GGG | - | chr3_1:76600364-76600383 | Msa0376490:intron | 40.0% | |
| TGAGGGAAAACTCTTGCAAT+TGG | - | chr3_1:76600381-76600400 | Msa0376490:intron | 40.0% | |
| TCTTGCAATTGGACATAGAG+AGG | - | chr3_1:76600392-76600411 | Msa0376490:intron | 40.0% | |
| AGTAATCGAGTGAATGATGC+CGG | - | chr3_1:76600538-76600557 | Msa0376490:intron | 40.0% | |
| TCTTTCAAATAATGAGGCCC+AGG | + | chr3_1:76600607-76600626 | None:intergenic | 40.0% | |
| TGCATGCATACAAACAACAG+CGG | + | chr3_1:76600745-76600764 | None:intergenic | 40.0% | |
| AGAAGGGGCTATTAAATGAG+AGG | + | chr3_1:76600857-76600876 | None:intergenic | 40.0% | |
| ATACCTGCGAGTTAACACTC+AGG | + | chr3_1:76598712-76598731 | None:intergenic | 45.0% | |
| CACCACTTTCCTTTCGCATT+TGG | + | chr3_1:76598822-76598841 | None:intergenic | 45.0% | |
| CAAATGCGAAAGGAAAGTGG+TGG | - | chr3_1:76598820-76598839 | Msa0376490:CDS | 45.0% | |
| TTCCGGAAAATGAGCAAACG+GGG | + | chr3_1:76599174-76599193 | None:intergenic | 45.0% | |
| ! | CGTTTGCTCATTTTCCGGAA+AGG | - | chr3_1:76599174-76599193 | Msa0376490:intron | 45.0% |
| ! | GCTCATTTTCCGGAAAGGAA+AGG | - | chr3_1:76599179-76599198 | Msa0376490:intron | 45.0% |
| TTGGAAAGTTAGGGGACTAG+AGG | - | chr3_1:76599232-76599251 | Msa0376490:intron | 45.0% | |
| CATTGGGTATATGGATCCTC+TGG | + | chr3_1:76599822-76599841 | None:intergenic | 45.0% | |
| ACAACAGTTGGGTCATTAGG+GGG | + | chr3_1:76599923-76599942 | None:intergenic | 45.0% | |
| GCAACAACAGTTGGGTCATT+AGG | + | chr3_1:76599926-76599945 | None:intergenic | 45.0% | |
| ! | CACAGGTTTTCACGAGTATC+AGG | - | chr3_1:76600237-76600256 | Msa0376490:intron | 45.0% |
| ! | GGAATGCGCTCCATTTTGTA+GGG | + | chr3_1:76600328-76600347 | None:intergenic | 45.0% |
| ! | AGGAATGCGCTCCATTTTGT+AGG | + | chr3_1:76600329-76600348 | None:intergenic | 45.0% |
| GGTGAGGAAGATAAAGGATG+AGG | - | chr3_1:76600363-76600382 | Msa0376490:intron | 45.0% | |
| TGTGAATGAGATAGCAGCTG+AGG | - | chr3_1:76600447-76600466 | Msa0376490:intron | 45.0% | |
| GTTGCTCTCAACATAAGCGT+TGG | + | chr3_1:76600473-76600492 | None:intergenic | 45.0% | |
| CGCTTATGTTGAGAGCAACA+TGG | - | chr3_1:76600474-76600493 | Msa0376490:intron | 45.0% | |
| GAGAGCAACATGGATGAGTA+TGG | - | chr3_1:76600484-76600503 | Msa0376490:intron | 45.0% | |
| AGCAACATGGATGAGTATGG+AGG | - | chr3_1:76600487-76600506 | Msa0376490:intron | 45.0% | |
| AGGTTTGAAGGGATCAGACT+CGG | + | chr3_1:76600587-76600606 | None:intergenic | 45.0% | |
| AGTCTGATCCCTTCAAACCT+GGG | - | chr3_1:76600587-76600606 | Msa0376490:intron | 45.0% | |
| TAATGAGGCCCAGGTTTGAA+GGG | + | chr3_1:76600598-76600617 | None:intergenic | 45.0% | |
| ATAATGAGGCCCAGGTTTGA+AGG | + | chr3_1:76600599-76600618 | None:intergenic | 45.0% | |
| TGCGAGTTAACACTCAGGCT+CGG | + | chr3_1:76598707-76598726 | None:intergenic | 50.0% | |
| !! | GTGGTGGACGAAGAATATGG+AGG | - | chr3_1:76598836-76598855 | Msa0376490:CDS | 50.0% |
| GACGAAGAATATGGAGGCGA+AGG | - | chr3_1:76598842-76598861 | Msa0376490:CDS | 50.0% | |
| ! | TCCCCCGTTTGCTCATTTTC+CGG | - | chr3_1:76599169-76599188 | Msa0376490:intron | 50.0% |
| TCCGGAAAATGAGCAAACGG+GGG | + | chr3_1:76599173-76599192 | None:intergenic | 50.0% | |
| TGCATGTTACGGAAGTGAGC+TGG | - | chr3_1:76599288-76599307 | Msa0376490:intron | 50.0% | |
| GTTGCTGCAAGGACGAACAT+AGG | - | chr3_1:76599481-76599500 | Msa0376490:intron | 50.0% | |
| AAGGGAAAAGGTAGCGTGAC+AGG | - | chr3_1:76599608-76599627 | Msa0376490:intron | 50.0% | |
| AGGGAAAAGGTAGCGTGACA+GGG | - | chr3_1:76599609-76599628 | Msa0376490:intron | 50.0% | |
| CACCTTGCTTCATTCTCTCG+CGG | - | chr3_1:76599738-76599757 | Msa0376490:intron | 50.0% | |
| ATCCGCGAGAGAATGAAGCA+AGG | + | chr3_1:76599743-76599762 | None:intergenic | 50.0% | |
| ! | GTTGGAGTATCAAGTGCCAG+AGG | - | chr3_1:76599803-76599822 | Msa0376490:intron | 50.0% |
| CCTCGGTAGCAACAACAGTT+GGG | + | chr3_1:76599934-76599953 | None:intergenic | 50.0% | |
| ACCTCGGTAGCAACAACAGT+TGG | + | chr3_1:76599935-76599954 | None:intergenic | 50.0% | |
| CACATATCCGTCCCAGTATC+TGG | - | chr3_1:76600058-76600077 | Msa0376490:intron | 50.0% | |
| ! | CATTCCTTTTCTCGAGGAGC+AGG | - | chr3_1:76600342-76600361 | Msa0376490:intron | 50.0% |
| GGAGCAGGTGAGGAAGATAA+AGG | - | chr3_1:76600357-76600376 | Msa0376490:intron | 50.0% | |
| GAGTCTGATCCCTTCAAACC+TGG | - | chr3_1:76600586-76600605 | Msa0376490:intron | 50.0% | |
| TTTACGCGGAGAGCCATAGC+TGG | + | chr3_1:76598546-76598565 | None:intergenic | 55.0% | |
| GCGAGTTAACACTCAGGCTC+GGG | + | chr3_1:76598706-76598725 | None:intergenic | 55.0% | |
| GAGCCTGAGTGTTAACTCGC+AGG | - | chr3_1:76598706-76598725 | Msa0376490:exon | 55.0% | |
| AGGTAGCGTGACAGGGAATG+AGG | - | chr3_1:76599616-76599635 | Msa0376490:intron | 55.0% | |
| TAGCGTGACAGGGAATGAGG+AGG | - | chr3_1:76599619-76599638 | Msa0376490:intron | 55.0% | |
| AGGAGGAGAAGAGCCAAGAG+AGG | - | chr3_1:76599636-76599655 | Msa0376490:intron | 55.0% | |
| CGCGAGAGAATGAAGCAAGG+TGG | + | chr3_1:76599740-76599759 | None:intergenic | 55.0% | |
| CCCAACTGTTGTTGCTACCG+AGG | - | chr3_1:76599931-76599950 | Msa0376490:intron | 55.0% | |
| ! | GGAGCGCATTCCTTTTCTCG+AGG | - | chr3_1:76600336-76600355 | Msa0376490:intron | 55.0% |
| CTCACCTGCTCCTCGAGAAA+AGG | + | chr3_1:76600349-76600368 | None:intergenic | 55.0% | |
| ! | CTTTTCTCGAGGAGCAGGTG+AGG | - | chr3_1:76600347-76600366 | Msa0376490:intron | 55.0% |
| ! | TGCCGGATTTTACCGTCCAG+AGG | - | chr3_1:76600555-76600574 | Msa0376490:intron | 55.0% |
| CGCCTCTGGACGGTAAAATC+CGG | + | chr3_1:76600560-76600579 | None:intergenic | 55.0% | |
| TTGGGTCATTAGGGGGTCCG+AGG | + | chr3_1:76599916-76599935 | None:intergenic | 60.0% | |
| ACTCGGCATACGCCTCTGGA+CGG | + | chr3_1:76600570-76600589 | None:intergenic | 60.0% | |
| TCAGACTCGGCATACGCCTC+TGG | + | chr3_1:76600574-76600593 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 76598427 | 76600937 | 76598427 | ID=Msa0376490;Name=Msa0376490 |
| chr3_1 | mRNA | 76598427 | 76600937 | 76598427 | ID=Msa0376490-mRNA-1;Parent=Msa0376490;Name=Msa0376490-mRNA-1;_AED=0.14;_eAED=0.14;_QI=122|1|1|1|0.66|1|4|298|165 |
| chr3_1 | exon | 76598427 | 76599060 | 76598427 | ID=Msa0376490-mRNA-1:exon:18255;Parent=Msa0376490-mRNA-1 |
| chr3_1 | exon | 76600494 | 76600553 | 76600494 | ID=Msa0376490-mRNA-1:exon:18254;Parent=Msa0376490-mRNA-1 |
| chr3_1 | exon | 76600637 | 76600693 | 76600637 | ID=Msa0376490-mRNA-1:exon:18253;Parent=Msa0376490-mRNA-1 |
| chr3_1 | exon | 76600771 | 76600937 | 76600771 | ID=Msa0376490-mRNA-1:exon:18252;Parent=Msa0376490-mRNA-1 |
| chr3_1 | five_prime_UTR | 76600816 | 76600937 | 76600816 | ID=Msa0376490-mRNA-1:five_prime_utr;Parent=Msa0376490-mRNA-1 |
| chr3_1 | CDS | 76600771 | 76600815 | 76600771 | ID=Msa0376490-mRNA-1:cds;Parent=Msa0376490-mRNA-1 |
| chr3_1 | CDS | 76600637 | 76600693 | 76600637 | ID=Msa0376490-mRNA-1:cds;Parent=Msa0376490-mRNA-1 |
| chr3_1 | CDS | 76600494 | 76600553 | 76600494 | ID=Msa0376490-mRNA-1:cds;Parent=Msa0376490-mRNA-1 |
| chr3_1 | CDS | 76598725 | 76599060 | 76598725 | ID=Msa0376490-mRNA-1:cds;Parent=Msa0376490-mRNA-1 |
| chr3_1 | three_prime_UTR | 76598427 | 76598724 | 76598427 | ID=Msa0376490-mRNA-1:three_prime_utr;Parent=Msa0376490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
