AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0705210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705210 MtrunA17_Chr8g0383861 95.154 227 10 1 200 425 1 227 6.66e-143 406
Msa0705210 MtrunA17_Chr8g0383861 79.646 226 17 2 1 197 1 226 7.74e-113 330
Msa0705210 MtrunA17_Chr8g0383941 79.736 227 36 3 200 424 1 219 3.28e-123 356
Msa0705210 MtrunA17_Chr8g0383941 67.401 227 34 6 1 196 1 218 1.51e-88 268
Msa0705210 MtrunA17_Chr8g0383881 83.556 225 26 3 200 423 1 215 6.87e-123 355
Msa0705210 MtrunA17_Chr8g0383881 72.646 223 28 3 1 197 1 216 5.12e-99 295
Msa0705210 MtrunA17_Chr8g0383901 79.646 226 36 2 200 424 1 217 1.56e-118 344
Msa0705210 MtrunA17_Chr8g0383901 68.664 217 46 3 1 196 1 216 3.49e-85 259
Msa0705210 MtrunA17_Chr8g0383871 78.761 226 46 2 200 424 1 225 7.28e-116 338
Msa0705210 MtrunA17_Chr8g0383871 67.556 225 43 3 1 196 1 224 5.43e-85 259
Msa0705210 MtrunA17_Chr8g0383931 78.414 227 47 2 200 424 1 227 3.56e-105 311
Msa0705210 MtrunA17_Chr8g0383931 70.354 226 37 3 1 196 1 226 8.20e-83 253
Msa0705210 MtrunA17_Chr8g0383921 77.465 213 43 3 200 410 1 210 2.90e-103 305
Msa0705210 MtrunA17_Chr8g0383921 66.667 210 43 3 1 183 1 210 6.49e-79 243
Msa0705210 MtrunA17_Chr3g0129671 62.821 234 73 4 200 425 1 228 2.55e-95 285
Msa0705210 MtrunA17_Chr3g0129671 52.814 231 69 7 1 196 1 226 1.83e-63 204
Msa0705210 MtrunA17_Chr3g0128771 49.682 157 64 3 231 386 24 166 9.25e-42 145
Msa0705210 MtrunA17_Chr3g0128771 41.406 128 48 3 57 158 40 166 6.07e-22 92.4
Msa0705210 MtrunA17_Chr7g0244851 50.350 143 63 3 244 385 18 153 3.66e-41 144
Msa0705210 MtrunA17_Chr7g0244851 40.146 137 57 5 45 157 18 153 5.01e-20 87.0
Msa0705210 MtrunA17_Chr3g0144241 47.260 146 64 4 257 397 26 163 3.14e-34 126
Msa0705210 MtrunA17_Chr3g0144241 38.732 142 59 6 56 171 24 163 2.32e-18 82.8
Msa0705210 MtrunA17_Chr5g0407431 47.445 137 62 3 256 390 29 157 4.44e-34 126
Msa0705210 MtrunA17_Chr5g0407431 39.216 153 59 8 56 177 28 177 8.30e-20 87.4
Msa0705210 MtrunA17_Chr8g0370171 49.231 130 51 5 256 381 22 140 3.06e-32 121
Msa0705210 MtrunA17_Chr8g0370171 37.500 120 51 4 57 153 22 140 8.46e-16 75.9
Msa0705210 MtrunA17_Chr2g0297011 38.961 154 82 3 229 382 4 145 8.90e-31 115
Msa0705210 MtrunA17_Chr2g0297011 32.414 145 75 4 30 154 4 145 7.63e-13 66.2
Msa0705210 MtrunA17_Chr4g0052671 41.447 152 79 5 232 382 7 149 1.83e-29 112
Msa0705210 MtrunA17_Chr4g0052671 44.000 75 26 1 96 154 75 149 1.43e-13 68.2
Msa0705210 MtrunA17_Chr1g0167811 28.188 149 92 3 243 382 24 166 3.16e-20 90.9
Msa0705210 MtrunA17_Chr7g0273051 33.553 152 79 5 243 385 28 166 1.87e-19 89.4
Msa0705210 MtrunA17_Chr7g0273051 31.915 141 67 5 44 157 28 166 4.51e-13 70.1
Msa0705210 MtrunA17_Chr1g0203541 44.898 98 50 1 295 388 88 185 2.66e-19 85.9
Msa0705210 MtrunA17_Chr1g0203541 42.169 83 29 1 97 160 103 185 5.71e-12 64.7
Msa0705210 MtrunA17_Chr8g0345361 45.570 79 40 2 312 389 92 168 1.17e-18 85.1
Msa0705210 MtrunA17_Chr8g0345361 40.260 77 32 3 99 161 92 168 1.44e-12 67.4
Msa0705210 MtrunA17_Chr4g0030831 44.578 83 41 2 302 381 74 154 2.46e-18 82.0
Msa0705210 MtrunA17_Chr1g0191601 32.886 149 89 5 241 385 32 173 4.75e-18 85.1
Msa0705210 MtrunA17_Chr1g0191601 30.070 143 72 5 42 157 32 173 1.40e-11 65.9
Msa0705210 MtrunA17_Chr3g0113811 29.762 168 106 4 241 399 3 167 6.51e-18 80.9
Msa0705210 MtrunA17_Chr6g0470751 36.667 120 72 2 264 381 51 168 9.04e-18 83.6
Msa0705210 MtrunA17_Chr6g0470751 32.667 150 77 5 24 153 23 168 4.77e-12 66.6
Msa0705210 MtrunA17_Chr7g0276591 57.895 57 24 0 331 387 93 149 2.63e-17 82.0
Msa0705210 MtrunA17_Chr7g0276591 58.537 41 17 0 119 159 109 149 6.83e-11 62.8
Msa0705210 MtrunA17_Chr4g0067591 44.595 74 34 2 310 381 78 146 3.26e-17 81.3
Msa0705210 MtrunA17_Chr5g0437361 37.405 131 72 4 279 408 44 165 6.11e-17 78.2
Msa0705210 MtrunA17_Chr5g0426871 39.796 98 54 2 289 384 88 182 6.89e-17 82.0
Msa0705210 MtrunA17_Chr6g0486651 32.468 154 94 2 229 382 19 162 7.12e-17 81.6
Msa0705210 MtrunA17_Chr4g0027761 43.590 78 39 2 311 388 99 171 1.01e-16 78.2
Msa0705210 MtrunA17_Chr4g0027761 35.526 76 37 2 96 160 97 171 5.54e-11 61.6
Msa0705210 MtrunA17_Chr3g0132491 43.590 78 42 1 310 385 105 182 1.57e-16 80.9
Msa0705210 MtrunA17_Chr5g0426781 32.759 116 75 2 272 385 86 200 2.45e-16 80.1
Msa0705210 MtrunA17_Chr5g0430781 50.000 76 34 2 311 386 86 157 2.62e-16 77.4
Msa0705210 MtrunA17_Chr3g0105441 43.590 78 41 1 311 385 101 178 2.92e-16 78.2
Msa0705210 MtrunA17_Chr7g0274741 39.744 78 45 1 311 386 69 146 2.95e-16 76.6
Msa0705210 MtrunA17_Chr2g0327791 61.702 47 18 0 335 381 131 177 2.97e-16 77.4
Msa0705210 MtrunA17_Chr4g0013561 29.508 122 82 2 302 423 75 192 6.67e-16 76.6
Msa0705210 MtrunA17_Chr4g0013561 25.517 145 91 3 89 219 75 216 2.48e-11 63.2
Msa0705210 MtrunA17_Chr3g0118071 37.374 99 60 2 287 384 52 149 7.70e-16 76.3
Msa0705210 MtrunA17_Chr1g0198201 37.079 89 56 0 298 386 47 135 9.18e-16 76.3
Msa0705210 MtrunA17_Chr7g0246761 38.393 112 60 3 310 420 61 164 1.10e-15 75.1
Msa0705210 MtrunA17_Chr4g0073141 43.038 79 45 0 307 385 112 190 1.35e-15 78.6
Msa0705210 MtrunA17_Chr2g0325141 35.338 133 68 4 267 381 1 133 2.09e-15 73.2
Msa0705210 MtrunA17_Chr3g0118061 39.130 92 55 1 294 384 58 149 2.34e-15 74.7
Msa0705210 MtrunA17_Chr2g0295571 39.241 79 47 1 303 381 84 161 3.43e-15 75.9
Msa0705210 MtrunA17_Chr8g0381731 37.500 80 49 1 312 391 148 226 3.59e-15 75.9
Msa0705210 MtrunA17_Chr6g0451031 43.478 69 37 1 313 381 45 111 3.68e-15 72.0
Msa0705210 MtrunA17_Chr5g0411081 39.241 79 47 1 307 385 117 194 4.51e-15 76.3
Msa0705210 MtrunA17_Chr3g0133001 43.056 72 40 1 310 381 128 198 6.43e-15 76.3
Msa0705210 MtrunA17_Chr7g0274711 39.744 78 45 1 309 384 64 141 6.49e-15 72.8
Msa0705210 MtrunA17_Chr2g0307411 32.787 122 73 2 264 385 34 146 7.18e-15 72.8
Msa0705210 MtrunA17_Chr8g0366561 33.333 162 82 5 225 381 44 184 7.54e-15 75.5
Msa0705210 MtrunA17_Chr1g0184631 39.744 78 45 1 309 384 65 142 1.04e-14 72.0
Msa0705210 MtrunA17_Chr1g0186661 31.967 122 69 3 280 389 62 181 1.13e-14 75.1
Msa0705210 MtrunA17_Chr4g0050041 42.857 70 39 1 312 381 126 194 1.30e-14 74.7
Msa0705210 MtrunA17_Chr1g0184171 38.961 77 47 0 305 381 96 172 1.79e-14 74.3
Msa0705210 MtrunA17_Chr2g0325161 41.026 78 41 1 309 381 88 165 3.16e-14 72.0
Msa0705210 MtrunA17_Chr5g0409211 30.714 140 78 4 252 381 6 136 3.20e-14 70.5
Msa0705210 MtrunA17_Chr7g0248841 42.857 63 36 0 334 396 99 161 3.41e-14 70.1
Msa0705210 MtrunA17_Chr2g0279431 60.000 45 18 0 337 381 159 203 4.17e-14 73.6
Msa0705210 MtrunA17_Chr5g0426881 39.744 78 45 1 310 385 112 189 4.68e-14 73.6
Msa0705210 MtrunA17_Chr4g0060981 34.694 98 62 1 285 382 122 217 6.78e-14 70.5
Msa0705210 MtrunA17_Chr6g0451161 31.852 135 81 3 260 384 71 204 7.33e-14 72.8
Msa0705210 MtrunA17_Chr3g0126931 41.892 74 42 1 312 385 101 173 1.01e-13 72.0
Msa0705210 MtrunA17_Chr5g0433861 35.115 131 75 3 258 381 21 148 1.22e-13 71.2
Msa0705210 MtrunA17_Chr5g0427431 40.278 72 42 1 310 381 132 202 1.42e-13 72.0
Msa0705210 MtrunA17_Chr5g0413841 40.260 77 45 1 308 384 112 187 1.59e-13 71.6
Msa0705210 MtrunA17_Chr2g0300331 34.043 141 65 5 250 381 90 211 1.59e-13 70.1
Msa0705210 MtrunA17_Chr3g0123631 36.957 92 51 2 297 381 26 117 1.68e-13 68.9
Msa0705210 MtrunA17_Chr5g0444161 43.421 76 40 2 308 381 153 227 1.69e-13 69.7
Msa0705210 MtrunA17_Chr3g0143301 38.554 83 47 2 299 381 35 113 2.08e-13 67.0
Msa0705210 MtrunA17_Chr7g0269491 37.234 94 49 3 313 397 67 159 2.68e-13 68.6
Msa0705210 MtrunA17_Chr8g0348151 38.571 70 40 1 312 381 90 156 2.92e-13 68.6
Msa0705210 MtrunA17_Chr1g0177041 39.726 73 40 2 312 381 74 145 3.19e-13 67.4
Msa0705210 MtrunA17_Chr4g0059281 39.189 74 44 1 308 381 102 174 3.25e-13 70.1
Msa0705210 MtrunA17_Chr5g0396611 38.750 80 48 1 303 381 303 382 3.68e-13 70.5
Msa0705210 MtrunA17_Chr3g0123641 37.349 83 50 1 304 384 38 120 3.83e-13 68.9
Msa0705210 MtrunA17_Chr5g0396591 37.500 80 49 1 303 381 203 282 3.97e-13 69.7
Msa0705210 MtrunA17_Chr8g0350741 41.096 73 43 0 318 390 68 140 4.13e-13 67.4
Msa0705210 MtrunA17_Chr8g0364881 37.975 79 48 1 308 386 64 141 5.84e-13 69.7
Msa0705210 MtrunA17_Chr8g0371291 41.333 75 39 1 310 384 156 225 6.64e-13 67.8
Msa0705210 MtrunA17_Chr8g0388201 38.961 77 46 1 306 381 313 389 7.22e-13 69.7
Msa0705210 MtrunA17_Chr3g0081611 27.407 135 89 3 251 381 21 150 1.02e-12 66.2
Msa0705210 MtrunA17_Chr5g0409201 53.488 43 20 0 339 381 93 135 1.05e-12 65.9
Msa0705210 MtrunA17_Chr7g0237871 43.478 69 38 1 315 382 133 201 1.43e-12 67.0
Msa0705210 MtrunA17_Chr3g0126611 39.437 71 42 1 312 381 303 373 1.52e-12 68.9
Msa0705210 MtrunA17_Chr5g0406031 37.662 77 47 1 309 384 158 234 1.92e-12 66.6
Msa0705210 MtrunA17_Chr6g0451051 39.726 73 43 1 309 381 37 108 1.98e-12 65.1
Msa0705210 MtrunA17_Chr7g0248831 36.486 74 46 1 309 381 77 150 2.46e-12 65.1
Msa0705210 MtrunA17_Chr8g0343571 60.000 45 18 0 337 381 83 127 2.52e-12 65.1
Msa0705210 MtrunA17_Chr8g0366521 32.824 131 78 3 258 381 21 148 3.88e-12 67.0
Msa0705210 MtrunA17_Chr3g0124531 49.231 65 28 3 322 385 55 115 4.22e-12 63.9
Msa0705210 MtrunA17_Chr5g0444141 43.421 76 40 2 308 381 188 262 5.00e-12 66.2
Msa0705210 MtrunA17_Chr2g0317671 33.333 108 63 2 284 384 99 204 5.28e-12 64.7
Msa0705210 MtrunA17_Chr5g0396601 39.437 71 42 1 312 381 322 392 5.44e-12 67.0
Msa0705210 MtrunA17_Chr1g0157091 36.111 72 42 1 310 381 46 113 6.63e-12 62.8
Msa0705210 MtrunA17_Chr8g0345381 53.488 43 20 0 339 381 53 95 7.43e-12 63.2
Msa0705210 MtrunA17_Chr7g0275601 34.667 75 44 1 312 381 76 150 8.36e-12 63.2
Msa0705210 MtrunA17_Chr8g0369571 53.488 43 20 0 339 381 90 132 1.27e-11 63.2
Msa0705210 MtrunA17_Chr4g0010171 32.292 96 65 0 302 397 76 171 1.29e-11 63.5
Msa0705210 MtrunA17_Chr7g0274721 38.356 73 43 1 309 381 65 135 1.41e-11 62.8
Msa0705210 MtrunA17_Chr8g0345401 53.488 43 20 0 339 381 49 91 1.56e-11 62.0
Msa0705210 MtrunA17_Chr3g0117821 36.905 84 52 1 299 381 44 127 1.99e-11 62.0
Msa0705210 MtrunA17_Chr8g0388231 41.667 72 39 2 312 381 309 379 3.07e-11 64.7
Msa0705210 MtrunA17_Chr3g0120011 33.673 98 60 3 302 399 86 178 3.82e-11 62.4
Msa0705210 MtrunA17_Chr8g0369691 47.692 65 32 2 318 381 424 487 7.08e-11 63.9
Msa0705210 MtrunA17_Chr8g0347101 36.620 71 44 1 312 381 286 356 7.15e-11 63.5
Msa0705210 MtrunA17_Chr7g0261091 32.500 80 51 2 305 381 63 142 8.46e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705210 AT1G49230.1 52.752 218 83 4 210 422 17 219 3.86e-69 218
Msa0705210 AT1G49230.1 42.105 209 81 6 11 190 17 214 2.08e-39 141
Msa0705210 AT1G49210.1 47.442 215 92 4 220 425 23 225 6.44e-58 189
Msa0705210 AT1G49210.1 39.048 210 83 6 22 196 24 223 1.50e-35 131
Msa0705210 AT1G49220.1 48.309 207 81 5 220 413 23 216 6.06e-57 188
Msa0705210 AT1G49220.1 41.954 174 67 6 21 166 23 190 1.41e-33 126
Msa0705210 AT1G49200.1 45.833 216 94 5 220 425 24 226 2.03e-56 186
Msa0705210 AT1G49200.1 38.725 204 80 6 21 189 24 217 8.02e-36 132
Msa0705210 AT3G18773.1 44.053 227 107 7 205 425 8 220 6.09e-53 176
Msa0705210 AT3G18773.1 36.842 209 106 8 11 196 13 218 1.24e-29 115
Msa0705210 AT5G05280.1 52.817 142 60 2 245 386 26 160 5.09e-43 149
Msa0705210 AT5G05280.1 43.262 141 46 4 46 158 26 160 2.79e-23 96.7
Msa0705210 AT3G10910.1 54.135 133 57 2 256 385 29 160 1.30e-40 143
Msa0705210 AT3G10910.1 40.645 155 48 7 49 172 26 167 1.13e-19 86.7
Msa0705210 AT1G20823.1 43.373 166 81 4 222 385 3 157 6.24e-36 131
Msa0705210 AT1G20823.1 34.940 166 66 6 23 157 3 157 2.36e-18 83.2
Msa0705210 AT1G76410.1 45.205 146 71 2 245 387 13 152 3.08e-35 129
Msa0705210 AT1G76410.1 38.356 146 62 5 41 159 8 152 1.08e-19 86.7
Msa0705210 AT5G01880.1 45.198 177 71 5 211 386 1 152 4.90e-30 114
Msa0705210 AT5G01880.1 45.783 83 29 3 99 167 79 159 3.87e-16 75.9
Msa0705210 AT2G17450.1 41.912 136 58 4 257 384 25 147 3.09e-29 113
Msa0705210 AT2G17450.1 33.858 127 52 4 58 156 25 147 3.37e-13 68.2
Msa0705210 AT5G47610.1 36.875 160 89 2 222 381 2 149 1.21e-27 108
Msa0705210 AT4G35480.1 39.456 147 69 3 253 385 19 159 1.53e-26 106
Msa0705210 AT4G35480.1 32.000 175 71 6 54 188 19 185 9.24e-12 64.3
Msa0705210 AT4G17245.1 38.406 138 60 3 250 381 27 145 1.75e-23 96.7
Msa0705210 AT3G05200.1 33.333 156 97 3 264 412 49 204 3.47e-19 89.4
Msa0705210 AT1G72200.1 31.515 165 106 5 244 403 47 209 1.90e-18 87.0
Msa0705210 AT1G72310.1 48.718 78 38 1 308 385 98 173 3.05e-18 85.5
Msa0705210 AT2G27940.1 39.604 101 58 2 298 398 101 198 3.22e-18 84.0
Msa0705210 AT4G09120.1 35.766 137 77 4 247 381 38 165 1.35e-17 84.0
Msa0705210 AT4G09110.1 34.711 121 71 3 263 381 51 165 2.41e-17 82.8
Msa0705210 AT1G53820.1 44.872 78 39 2 308 384 91 165 2.59e-17 82.8
Msa0705210 AT1G53820.1 38.667 75 33 2 95 156 91 165 2.46e-11 64.7
Msa0705210 AT1G35330.1 34.884 129 73 5 265 384 48 174 2.67e-17 82.8
Msa0705210 AT3G14320.1 49.296 71 34 1 312 382 63 131 4.23e-17 80.1
Msa0705210 AT4G40070.1 36.364 132 63 4 263 384 49 169 6.71e-17 81.6
Msa0705210 AT3G16720.1 38.462 104 56 4 308 410 90 186 9.39e-17 80.9
Msa0705210 AT5G57750.1 41.333 75 44 0 308 382 91 165 3.27e-16 77.4
Msa0705210 AT1G22500.1 30.000 150 101 3 252 399 31 178 3.67e-16 80.1
Msa0705210 AT1G22500.1 34.146 123 61 4 65 169 56 176 9.48e-11 63.5
Msa0705210 AT4G30400.1 42.667 75 43 0 307 381 102 176 5.24e-16 80.1
Msa0705210 AT1G04360.1 29.771 131 82 2 261 381 46 176 5.25e-16 79.7
Msa0705210 AT1G28040.1 37.374 99 59 2 286 381 197 295 5.93e-16 78.6
Msa0705210 AT1G28040.1 32.323 99 49 2 73 153 197 295 3.91e-11 64.3
Msa0705210 AT2G35000.1 32.576 132 82 4 260 385 51 181 6.48e-16 79.3
Msa0705210 AT1G74410.1 38.000 100 55 2 285 384 129 221 7.20e-16 77.0
Msa0705210 AT5G27420.1 45.570 79 39 2 311 386 94 171 1.14e-15 78.6
Msa0705210 AT2G20030.1 47.143 70 36 1 312 381 98 166 1.80e-15 78.2
Msa0705210 AT4G09100.1 40.506 79 45 2 305 381 49 127 1.89e-15 73.2
Msa0705210 AT2G18650.1 43.590 78 44 0 308 385 95 172 2.14e-15 78.2
Msa0705210 AT4G17905.1 66.667 45 15 0 337 381 153 197 2.23e-15 77.0
Msa0705210 AT4G17905.2 66.667 45 15 0 337 381 179 223 2.46e-15 77.0
Msa0705210 AT1G23980.1 31.250 176 93 7 233 385 20 190 2.96e-15 77.4
Msa0705210 AT5G17600.1 43.056 72 40 1 310 381 114 184 3.20e-15 77.0
Msa0705210 AT2G46493.1 42.667 75 42 1 308 381 106 180 3.43e-15 73.9
Msa0705210 AT4G15975.1 37.363 91 55 1 294 384 33 121 3.45e-15 75.1
Msa0705210 AT4G09130.1 45.205 73 38 1 311 381 90 162 4.14e-15 76.6
Msa0705210 AT3G03550.1 59.184 49 20 0 337 385 157 205 5.13e-15 76.6
Msa0705210 AT2G25410.1 42.553 94 49 2 290 381 279 369 5.46e-15 76.6
Msa0705210 AT2G46494.1 27.315 216 135 5 172 381 159 358 1.01e-14 75.5
Msa0705210 AT4G28890.1 43.662 71 39 1 312 382 97 166 1.10e-14 75.9
Msa0705210 AT4G10150.1 30.000 130 85 3 256 385 34 157 1.44e-14 73.6
Msa0705210 AT5G05810.1 43.056 72 40 1 310 381 118 188 2.24e-14 75.1
Msa0705210 AT5G07040.1 26.389 144 93 3 240 381 4 136 2.34e-14 70.9
Msa0705210 AT2G35420.1 44.444 72 39 1 310 381 75 145 2.48e-14 73.2
Msa0705210 AT3G48030.2 37.931 87 48 1 304 384 88 174 2.51e-14 73.2
Msa0705210 AT3G19140.1 36.538 104 62 2 279 382 23 122 2.72e-14 70.1
Msa0705210 AT5G10380.1 40.000 75 44 1 307 381 104 177 2.84e-14 73.6
Msa0705210 AT2G34990.1 29.771 131 90 1 253 381 8 138 3.73e-14 73.2
Msa0705210 AT2G34990.2 29.771 131 90 1 253 381 30 160 4.35e-14 73.2
Msa0705210 AT3G48030.1 37.931 87 48 1 304 384 166 252 4.38e-14 73.6
Msa0705210 AT4G10160.1 32.031 128 75 4 262 385 24 143 4.43e-14 71.6
Msa0705210 AT3G18930.2 37.391 115 56 5 312 415 120 229 5.53e-14 73.6
Msa0705210 AT3G18930.3 37.391 115 56 5 312 415 120 229 5.53e-14 73.6
Msa0705210 AT3G18930.1 37.391 115 56 5 312 415 120 229 5.53e-14 73.6
Msa0705210 AT1G32361.1 37.398 123 69 5 282 404 101 215 6.67e-14 72.8
Msa0705210 AT4G17920.1 31.538 130 78 5 260 384 32 155 1.04e-13 71.6
Msa0705210 AT1G72220.1 57.778 45 19 0 337 381 175 219 1.18e-13 72.8
Msa0705210 AT2G35910.1 39.474 76 45 1 312 387 121 195 1.57e-13 70.1
Msa0705210 AT5G42200.1 39.189 74 44 1 308 381 74 146 1.71e-13 68.6
Msa0705210 AT5G66070.5 44.000 75 39 2 310 384 150 221 1.73e-13 70.1
Msa0705210 AT5G66070.1 44.000 75 39 2 310 384 150 221 1.73e-13 70.1
Msa0705210 AT5G43420.1 27.972 143 82 3 260 381 38 180 2.12e-13 71.6
Msa0705210 AT5G06490.1 33.663 101 52 2 312 406 96 187 2.77e-13 68.9
Msa0705210 AT3G62690.1 48.438 64 32 1 318 381 93 155 2.83e-13 70.1
Msa0705210 AT5G58580.1 34.653 101 66 0 310 410 109 209 2.90e-13 70.9
Msa0705210 AT5G66070.2 44.000 75 39 2 310 384 174 245 2.95e-13 69.7
Msa0705210 AT4G33565.1 52.941 51 24 0 337 387 215 265 3.50e-13 70.9
Msa0705210 AT2G46495.2 40.789 76 43 1 308 381 259 334 4.74e-13 70.5
Msa0705210 AT2G46495.1 40.789 76 43 1 308 381 287 362 4.82e-13 70.5
Msa0705210 AT1G33480.1 30.000 100 68 1 312 411 75 172 5.69e-13 69.3
Msa0705210 AT5G53110.1 39.437 71 42 1 312 381 302 372 8.35e-13 70.1
Msa0705210 AT5G36001.1 63.043 46 17 0 336 381 261 306 1.49e-12 68.6
Msa0705210 AT2G46160.1 36.364 77 42 1 312 381 104 180 1.63e-12 67.0
Msa0705210 AT2G46160.2 36.364 77 42 1 312 381 104 180 1.63e-12 67.0
Msa0705210 AT2G34000.1 26.984 126 87 2 260 382 11 134 1.67e-12 65.5
Msa0705210 AT2G47560.1 40.000 80 45 2 303 381 73 150 2.09e-12 67.0
Msa0705210 AT3G11110.1 37.349 83 52 0 299 381 67 149 3.37e-12 64.7
Msa0705210 AT5G40250.1 50.000 48 24 0 338 385 142 189 3.63e-12 67.8
Msa0705210 AT2G18670.1 34.667 75 49 0 307 381 78 152 3.78e-12 65.1
Msa0705210 AT2G42360.1 36.000 75 48 0 307 381 76 150 6.65e-12 65.5
Msa0705210 AT4G35840.1 39.241 79 40 2 309 382 159 234 7.17e-12 65.5
Msa0705210 AT2G17730.1 38.158 76 45 1 309 382 164 239 1.35e-11 64.7
Msa0705210 AT4G26400.2 39.506 81 41 2 301 381 210 282 1.49e-11 65.9
Msa0705210 AT4G26400.1 39.506 81 41 2 301 381 210 282 1.49e-11 65.9
Msa0705210 AT3G61550.1 33.333 93 52 2 305 387 92 184 1.77e-11 63.9
Msa0705210 AT2G42350.1 37.333 75 45 1 307 381 70 142 2.82e-11 63.5
Msa0705210 AT4G26580.1 37.037 81 45 2 309 384 254 333 4.13e-11 64.3
Msa0705210 AT4G26580.2 37.037 81 45 2 309 384 254 333 4.13e-11 64.3
Msa0705210 AT5G56340.1 44.118 68 30 2 314 381 241 300 6.30e-11 64.3
Msa0705210 AT3G20395.1 33.663 101 63 2 284 384 120 216 8.92e-11 62.0

Find 85 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCATAAGGTGCGCTTTA+AGG 0.098073 4_4:-77755796 Msa0705210:CDS
AATTCAACCAACTCATATTT+TGG 0.106711 4_4:-77755899 Msa0705210:CDS
AATTCAACTAACTCATATTT+TGG 0.108921 4_4:-77761149 Msa0705210:CDS
TGAGTTGAAACTACCAAATT+TGG 0.175122 4_4:-77755648 Msa0705210:CDS
ATTGATAATCAATTGGATTT+TGG 0.213343 4_4:+77755957 None:intergenic
ATTGATGATCAATTGGATTT+TGG 0.218436 4_4:+77761207 None:intergenic
CGGTGCCAGAAACTATTATT+AGG 0.257137 4_4:-77755430 Msa0705210:CDS
CGGTGCCAGAAACTATTATT+AGG 0.257137 4_4:-77760677 Msa0705210:CDS
TGGAAACCATGATTGCATTT+AGG 0.272632 4_4:+77755566 None:intergenic
CGCACCTTATGATGGAGTTT+AGG 0.273966 4_4:+77755804 None:intergenic
CGAAGAAGAGCCGTTGTTTA+GGG 0.291613 4_4:+77755760 None:intergenic
TCGAAGAAGAGCCGTTGTTT+AGG 0.297762 4_4:+77755759 None:intergenic
ACACACTCTGTATCCAAATT+TGG 0.302122 4_4:+77755635 None:intergenic
TGAATCCTAATAATAGTTTC+TGG 0.307133 4_4:+77755425 None:intergenic
AATATGAGTTGGTTGAATTA+TGG 0.317058 4_4:+77755903 None:intergenic
GCACCTTATGATGGAGTTTA+GGG 0.328253 4_4:+77755805 None:intergenic
TGAATCCTAATAATAGTTTC+TGG 0.344198 4_4:+77760672 None:intergenic
TGGAAACCATGATTGCATTT+AGG 0.379959 4_4:+77760816 None:intergenic
CAACAACTCTTCACCTCAAT+TGG 0.382798 4_4:-77755729 Msa0705210:CDS
TTATGGTTGGGTGTGAGAAC+AGG 0.385568 4_4:+77755920 None:intergenic
GAGACTTGTCGAAAGATTGT+TGG 0.388982 4_4:-77760726 Msa0705210:CDS
AGTTACATTCAAAAGCTTCA+TGG 0.410074 4_4:+77760640 None:intergenic
GGGTGTGAGAACAGGGGAGC+TGG 0.412102 4_4:+77755928 None:intergenic
GAGACTTGTCGAAAGATTGT+TGG 0.413029 4_4:-77755476 Msa0705210:CDS
CAACAACAATCCACCTCAAT+TGG 0.419352 4_4:-77760979 Msa0705210:CDS
GTTGGTGATTGATAATCAAT+TGG 0.420758 4_4:+77755950 None:intergenic
GGAAGCACCACCTATGTTGC+CGG 0.443914 4_4:-77755450 Msa0705210:CDS
ATGTTCGTTGCATCGACAAA+TGG 0.447158 4_4:-77755544 Msa0705210:CDS
ATGTTCGTTGCATCGACAAA+TGG 0.447158 4_4:-77760794 Msa0705210:CDS
AAGGAGGCATTGTCTGCACT+TGG 0.450962 4_4:+77760749 None:intergenic
GTTGGTGATTGATGATCAAT+TGG 0.451468 4_4:+77761200 None:intergenic
ATAGTTACGTTCAAAAGCTT+CGG 0.462496 4_4:+77755391 None:intergenic
AGCAAATAAGAGCACACAAT+AGG 0.463910 4_4:+77755834 None:intergenic
TCAGTTGAATAACTTACTGT+TGG 0.468597 4_4:+77755668 None:intergenic
TCAGTTGAATAACTTACTGT+TGG 0.468597 4_4:+77760918 None:intergenic
ATTCCTTTGTTAGCCAATTG+AGG 0.468663 4_4:+77755716 None:intergenic
TTGTCGAAAGATTGTTGGAT+TGG 0.474737 4_4:-77755471 Msa0705210:CDS
CCTTAAAGCGCACCTTATGA+TGG 0.477521 4_4:+77755796 None:intergenic
ATTCCTTTGTTGACCAATTG+AGG 0.479348 4_4:+77760966 None:intergenic
CAGTTGAATAACTTACTGTT+GGG 0.481542 4_4:+77755669 None:intergenic
CAGTTGAATAACTTACTGTT+GGG 0.481542 4_4:+77760919 None:intergenic
AGCACCGCCTCCTATGTTGC+CGG 0.494818 4_4:-77760697 Msa0705210:CDS
ACGAATTCCAAAATATGAGT+TGG 0.498815 4_4:+77755892 None:intergenic
TATGGTTGGGTGTGAGAACA+GGG 0.503796 4_4:+77755921 None:intergenic
AGGAGGCATTGTCTGCACTT+GGG 0.509273 4_4:+77760750 None:intergenic
TTGTAGAATCTCACACAAGA+AGG 0.511006 4_4:-77755988 Msa0705210:CDS
TTGCCCTAAACTCCATCATA+AGG 0.515596 4_4:-77755808 Msa0705210:CDS
AATATGAGTTAGTTGAATTG+TGG 0.521333 4_4:+77761153 None:intergenic
ATGGAAGAGTGGTGAAGTAA+AGG 0.523047 4_4:+77756018 None:intergenic
TTGTTGAATCTCACGCAAGA+AGG 0.523583 4_4:-77761238 Msa0705210:CDS
GTTTCTGGCACCGGCAACAT+AGG 0.524339 4_4:+77760687 None:intergenic
CTAATAATAGTTTCTGGCAC+CGG 0.527248 4_4:+77755431 None:intergenic
CTAATAATAGTTTCTGGCAC+CGG 0.527248 4_4:+77760678 None:intergenic
GGAATTCACGAAAGGTGAAA+AGG 0.529132 4_4:-77760850 Msa0705210:intron
GTTTCTGGCACCGGCAACAT+AGG 0.529637 4_4:+77755440 None:intergenic
GGAGGCATTGTCTGCACTTG+GGG 0.530430 4_4:+77760751 None:intergenic
TTGTCGAAAGATTGTTGGAT+CGG 0.534154 4_4:-77760721 Msa0705210:CDS
TGAGTTGGTTGAATTATGGT+TGG 0.539582 4_4:+77755907 None:intergenic
TGTCTCTCAGAGTTCACAAA+AGG 0.544000 4_4:-77755608 Msa0705210:CDS
GAGTTGGTTGAATTATGGTT+GGG 0.549920 4_4:+77755908 None:intergenic
GTGAGAACAGGGGACGTTGT+TGG 0.562716 4_4:+77761182 None:intergenic
ATTTGTCGATGCAACGAACA+TGG 0.562919 4_4:+77755546 None:intergenic
ATTTGTCGATGCAACGAACA+TGG 0.562919 4_4:+77760796 None:intergenic
TAACAAAGGAATCAAGAAGA+AGG 0.567789 4_4:-77755705 Msa0705210:CDS
TCTGGCACCGGCAACATAGG+AGG 0.567868 4_4:+77760690 None:intergenic
GAGATTCAACAAGAAGCTCA+TGG 0.568564 4_4:+77761249 None:intergenic
CCTTTGTTGACCAATTGAGG+TGG 0.571148 4_4:+77760969 None:intergenic
GTGAGAACAGGGGAGCTGGT+TGG 0.572964 4_4:+77755932 None:intergenic
AGGAGGCACTGTCTGCACTT+AGG 0.573168 4_4:+77755500 None:intergenic
GGCACCGGCAACATAGGAGG+CGG 0.580709 4_4:+77760693 None:intergenic
ATGGAGAAGAGGTAAAGTAA+AGG 0.584415 4_4:+77761268 None:intergenic
ACAAGAAGCTCATGGAGAAG+AGG 0.587733 4_4:+77761257 None:intergenic
GAGATTCTACAAGAAGCTCA+TGG 0.595637 4_4:+77755999 None:intergenic
CAATCTTTCGACAAGTCTCA+AGG 0.597223 4_4:+77755480 None:intergenic
CAATCTTTCGACAAGTCTCA+AGG 0.597223 4_4:+77760730 None:intergenic
TCAAAAGCTTCATGGTCTAG+TGG 0.599238 4_4:+77760648 None:intergenic
CCACCTCAATTGGTCAACAA+AGG 0.601823 4_4:-77760969 Msa0705210:CDS
TCACCTCAATTGGCTAACAA+AGG 0.606400 4_4:-77755719 Msa0705210:CDS
TCAAAAGCTTCGGCGTCTAG+CGG 0.624371 4_4:+77755401 None:intergenic
ACAAGAAGCTCATGGAAGAG+TGG 0.629363 4_4:+77756007 None:intergenic
TCTGGCACCGGCAACATAGG+TGG 0.632227 4_4:+77755443 None:intergenic
ATGGTTGGGTGTGAGAACAG+GGG 0.716569 4_4:+77755922 None:intergenic
TCGAACGTAGCCCTAAACAA+CGG 0.719891 4_4:-77755770 Msa0705210:CDS
TCTTTCGACAAGTCTCAAGG+AGG 0.763633 4_4:+77760733 None:intergenic
TCTTTCGACAAGTCTCAAGG+AGG 0.776052 4_4:+77755483 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTGAATAATTTACTTTT+TGG + chr4_4:77756371-77756390 None:intergenic 10.0%
!! AATTTGATTAAATATGAAAA+AGG - chr4_4:77756837-77756856 Msa0705210:intron 10.0%
!!! TAAGTAAATTTAAAATAGTT+CGG - chr4_4:77756923-77756942 Msa0705210:intron 10.0%
!!! TTATTTTATTTTTTTGACAA+GGG + chr4_4:77758375-77758394 None:intergenic 10.0%
!!! TTTATTTTATTTTTTTGACA+AGG + chr4_4:77758376-77758395 None:intergenic 10.0%
!!! CATTATTTTATTTTTTTACA+GGG + chr4_4:77758520-77758539 None:intergenic 10.0%
!!! TCATTATTTTATTTTTTTAC+AGG + chr4_4:77758521-77758540 None:intergenic 10.0%
!! AAAATATAAATATAACAATG+AGG - chr4_4:77758628-77758647 Msa0705210:intron 10.0%
!! TAAATAATTCAAAAAAAATG+AGG - chr4_4:77758715-77758734 Msa0705210:intron 10.0%
!!! ACTAATATAATTATATTTTG+TGG + chr4_4:77759415-77759434 None:intergenic 10.0%
!!! AATATTTTTTCTAAGATTAA+AGG + chr4_4:77760141-77760160 None:intergenic 10.0%
!! TTATAAGATTATGAATTCAT+TGG + chr4_4:77756226-77756245 None:intergenic 15.0%
!!! CACAAATTTTTTAATAACAA+AGG + chr4_4:77757008-77757027 None:intergenic 15.0%
!!! CTTTGTTATTAAAAAATTTG+TGG - chr4_4:77757006-77757025 Msa0705210:intron 15.0%
!!! ACTGAGTTTTTTTTTTTTTT+TGG - chr4_4:77757834-77757853 Msa0705210:intron 15.0%
!! TACTATTATTATCTATTCTA+AGG - chr4_4:77758040-77758059 Msa0705210:intron 15.0%
!!! ATAATTTATTTTTCAATCAG+CGG - chr4_4:77758179-77758198 Msa0705210:intron 15.0%
!!! ATTACTACAAACTTTTTATA+GGG + chr4_4:77758242-77758261 None:intergenic 15.0%
!!! TTTTATTAGAAAAATATCGA+TGG + chr4_4:77758590-77758609 None:intergenic 15.0%
!!! TAAAGTTTTGAGTAAAAATA+TGG + chr4_4:77758811-77758830 None:intergenic 15.0%
!!! TATTTTTACTCAAAACTTTA+AGG - chr4_4:77758811-77758830 Msa0705210:intron 15.0%
!! ACAAATTTGTCTTTAATAAA+TGG + chr4_4:77759329-77759348 None:intergenic 15.0%
!!! ATATAATTATATTTTGTGGA+TGG + chr4_4:77759411-77759430 None:intergenic 15.0%
!! AATTAACTATTATTGGTATT+TGG + chr4_4:77760471-77760490 None:intergenic 15.0%
!! AAGTTTGAATTAACTATTAT+TGG + chr4_4:77760478-77760497 None:intergenic 15.0%
!! TTAATATGTTAGAATTGATA+TGG + chr4_4:77760518-77760537 None:intergenic 15.0%
!!! AATTCAACTAACTCATATTT+TGG - chr4_4:77755511-77755530 Msa0705210:CDS 20.0%
!! AGCTACATTTAAAAATCTTA+AGG + chr4_4:77755632-77755651 None:intergenic 20.0%
!! TAATATAAATGACTACAAGT+AGG - chr4_4:77756444-77756463 Msa0705210:intron 20.0%
!! AACTTCATATTAAATACTTG+TGG - chr4_4:77756494-77756513 Msa0705210:intron 20.0%
!! ACTTCATATTAAATACTTGT+GGG - chr4_4:77756495-77756514 Msa0705210:intron 20.0%
!! AAAAAGTCAATTCAATTAAC+AGG + chr4_4:77756622-77756641 None:intergenic 20.0%
!!! AGACTGATAAATTATTTTGA+AGG - chr4_4:77756894-77756913 Msa0705210:intron 20.0%
!!! GACTGATAAATTATTTTGAA+GGG - chr4_4:77756895-77756914 Msa0705210:intron 20.0%
!! ATTTCAGTTTATATAGACAA+TGG - chr4_4:77757157-77757176 Msa0705210:intron 20.0%
!! TAGATTTAATGTTAAAAGAC+TGG + chr4_4:77757189-77757208 None:intergenic 20.0%
!!! CATCAGAAAACTTTATTTTT+TGG - chr4_4:77757217-77757236 Msa0705210:intron 20.0%
!!! TATGTTAAGCTTTTTTTTCT+GGG - chr4_4:77757676-77757695 Msa0705210:intron 20.0%
!! ATAGTAATTTCTTTGATCAT+AGG + chr4_4:77758026-77758045 None:intergenic 20.0%
!!! CATTACTACAAACTTTTTAT+AGG + chr4_4:77758243-77758262 None:intergenic 20.0%
!! AAAATATCTTTACTGCAAAA+GGG + chr4_4:77758419-77758438 None:intergenic 20.0%
!! AAAAATATCTTTACTGCAAA+AGG + chr4_4:77758420-77758439 None:intergenic 20.0%
!!! TTTTCTTAGAAAAATATCGA+TGG + chr4_4:77758452-77758471 None:intergenic 20.0%
!! AAAATATCTTTACTGCAAAA+GGG + chr4_4:77758419-77758438 None:intergenic 20.0%
!! AAAAATATCTTTACTGCAAA+AGG + chr4_4:77758420-77758439 None:intergenic 20.0%
!! AAAAAAAATGAGGATACTAT+TGG - chr4_4:77758725-77758744 Msa0705210:intron 20.0%
!!! TATGGTGAATAAATCTTTTA+AGG + chr4_4:77758793-77758812 None:intergenic 20.0%
!! AGAAAATAAATATACAAGAG+AGG + chr4_4:77758855-77758874 None:intergenic 20.0%
!! GGTAAAAAAAAAAATAGTGT+TGG + chr4_4:77758921-77758940 None:intergenic 20.0%
!!! GACATATAAATATTTAAGAC+TGG + chr4_4:77758972-77758991 None:intergenic 20.0%
!!! TCATTAAAGTTGTTTGATTT+TGG + chr4_4:77759495-77759514 None:intergenic 20.0%
!! AATAAGAAGAGAGAAAAAAA+AGG + chr4_4:77759521-77759540 None:intergenic 20.0%
!!! TTTTTTTTCTCTCTTCTTAT+TGG - chr4_4:77759520-77759539 Msa0705210:intron 20.0%
!! ATCAAAATTATTGAAGTTGT+TGG + chr4_4:77759761-77759780 None:intergenic 20.0%
!! CTAGTTAATTAATAATCCAA+CGG - chr4_4:77759928-77759947 Msa0705210:intron 20.0%
!!! TTCTAAGATTAAAGGTTTAA+AGG + chr4_4:77760133-77760152 None:intergenic 20.0%
!! ATATATTCACTATTCCTTTA+TGG - chr4_4:77760177-77760196 Msa0705210:intron 20.0%
!! TATATTCACTATTCCTTTAT+GGG - chr4_4:77760178-77760197 Msa0705210:intron 20.0%
!! TCATATATGTTAGATATCAT+AGG + chr4_4:77760244-77760263 None:intergenic 20.0%
!!! ATTGATAATCAATTGGATTT+TGG + chr4_4:77760706-77760725 None:intergenic 20.0%
!!! ATTGATGATCAATTGGATTT+TGG + chr4_4:77755456-77755475 None:intergenic 25.0%
! AATATGAGTTAGTTGAATTG+TGG + chr4_4:77755510-77755529 None:intergenic 25.0%
! TTGCATTAAACTTCATCATA+AGG - chr4_4:77755602-77755621 Msa0705210:CDS 25.0%
! TGAATCCTAATAATAGTTTC+TGG + chr4_4:77755991-77756010 None:intergenic 25.0%
!! AAGCTTTTGAATGTAACTAT+AGG - chr4_4:77756025-77756044 Msa0705210:CDS 25.0%
!! AGCTTTTGAATGTAACTATA+GGG - chr4_4:77756026-77756045 Msa0705210:CDS 25.0%
! AAGTAAATATGTGTATGAAG+TGG - chr4_4:77756291-77756310 Msa0705210:intron 25.0%
! AGTAAATATGTGTATGAAGT+GGG - chr4_4:77756292-77756311 Msa0705210:intron 25.0%
!!! AATTTACTTTTTGGCTTTGT+CGG + chr4_4:77756362-77756381 None:intergenic 25.0%
!! AAAGATCGAATACAAGATTT+TGG - chr4_4:77756417-77756436 Msa0705210:intron 25.0%
! GATATGGTTATTTAATCATG+AGG + chr4_4:77756669-77756688 None:intergenic 25.0%
!! GTTTGAAGAATTGAGATTTT+TGG - chr4_4:77756695-77756714 Msa0705210:intron 25.0%
! AAATATAATGTGCAGTTAGT+TGG + chr4_4:77756868-77756887 None:intergenic 25.0%
! AAATTGAAGTTGAGTGTTAA+TGG + chr4_4:77757306-77757325 None:intergenic 25.0%
! ACTACAAGGTAAATGAATAA+AGG + chr4_4:77757337-77757356 None:intergenic 25.0%
! TCTTACCTTTCTTTATGTTA+GGG - chr4_4:77757495-77757514 Msa0705210:intron 25.0%
! AAATCTATGTCAGATCTAAT+TGG - chr4_4:77757522-77757541 Msa0705210:intron 25.0%
!! AAATCAAAGTCTAAAACTAC+CGG - chr4_4:77757568-77757587 Msa0705210:intron 25.0%
!! TACTTGATAATTTCAACAAC+CGG + chr4_4:77757590-77757609 None:intergenic 25.0%
! AATGAAAGAAGAAGAAGAAT+TGG - chr4_4:77757614-77757633 Msa0705210:intron 25.0%
!!! GTATGTTAAGCTTTTTTTTC+TGG - chr4_4:77757675-77757694 Msa0705210:intron 25.0%
! TCAAATAGAGAAAACTGAAA+AGG + chr4_4:77757990-77758009 None:intergenic 25.0%
!!! ATTATCTATTCTAAGGTGAA+TGG - chr4_4:77758047-77758066 Msa0705210:intron 25.0%
!!! TTATCTATTCTAAGGTGAAT+GGG - chr4_4:77758048-77758067 Msa0705210:intron 25.0%
!!! CAGTAAAGATATTTTTCAAG+TGG - chr4_4:77758424-77758443 Msa0705210:intron 25.0%
!!! CAGTAAAGATATTTTTCAAG+TGG - chr4_4:77758424-77758443 Msa0705210:intron 25.0%
! GCATGTATTCCTAAAATTTA+TGG + chr4_4:77758660-77758679 None:intergenic 25.0%
! AGTCTCATATCTATTAGAAA+TGG + chr4_4:77758878-77758897 None:intergenic 25.0%
!! ATAAATAGTGTTGGAATTCT+TGG + chr4_4:77758942-77758961 None:intergenic 25.0%
! GGTATGAGAAAGATAAATTA+AGG + chr4_4:77759308-77759327 None:intergenic 25.0%
!!! CTCTTTATGCTATTTTAACA+TGG + chr4_4:77759455-77759474 None:intergenic 25.0%
! CATGTTAAAATAGCATAAAG+AGG - chr4_4:77759453-77759472 Msa0705210:intron 25.0%
! TCACAAAAGTTGTTTAAAAG+TGG - chr4_4:77759612-77759631 Msa0705210:intron 25.0%
!!! TATTTTGAGAGTGAGATTTA+TGG + chr4_4:77759660-77759679 None:intergenic 25.0%
! GTTGCAAGTAAAAAAAACAA+TGG - chr4_4:77760024-77760043 Msa0705210:intron 25.0%
!!! AATATGAGTTGGTTGAATTA+TGG + chr4_4:77760760-77760779 None:intergenic 25.0%
!! AATTCAACCAACTCATATTT+TGG - chr4_4:77760761-77760780 Msa0705210:CDS 25.0%
!! ATTTTACCTAAATGCAATCA+TGG - chr4_4:77761088-77761107 Msa0705210:intron 25.0%
! TGAATCCTAATAATAGTTTC+TGG + chr4_4:77755991-77756010 None:intergenic 25.0%
CAGTTGAATAACTTACTGTT+GGG + chr4_4:77755744-77755763 None:intergenic 30.0%
TCAGTTGAATAACTTACTGT+TGG + chr4_4:77755745-77755764 None:intergenic 30.0%
! ATTTTGCCTAAATGCAATCA+TGG - chr4_4:77755838-77755857 Msa0705210:CDS 30.0%
AGTTACATTCAAAAGCTTCA+TGG + chr4_4:77756023-77756042 None:intergenic 30.0%
TAGGGAAGAAAGTAGATAAA+TGG - chr4_4:77756044-77756063 Msa0705210:intron 30.0%
GATCAACTTATTCTCAACAT+CGG + chr4_4:77756254-77756273 None:intergenic 30.0%
GTAAATATGTGTATGAAGTG+GGG - chr4_4:77756293-77756312 Msa0705210:intron 30.0%
!!! ATTTACTTTTTGGCTTTGTC+GGG + chr4_4:77756361-77756380 None:intergenic 30.0%
! ATCGAATACAAGATTTTGGA+AGG - chr4_4:77756421-77756440 Msa0705210:intron 30.0%
GACTACAAGTAGGAATATTA+TGG - chr4_4:77756454-77756473 Msa0705210:intron 30.0%
TCATATTAAATACTTGTGGG+TGG - chr4_4:77756498-77756517 Msa0705210:intron 30.0%
CATATTAAATACTTGTGGGT+GGG - chr4_4:77756499-77756518 Msa0705210:intron 30.0%
ATATTAAATACTTGTGGGTG+GGG - chr4_4:77756500-77756519 Msa0705210:intron 30.0%
TGGTTATTTAATCATGAGGT+GGG + chr4_4:77756665-77756684 None:intergenic 30.0%
ATGGTTATTTAATCATGAGG+TGG + chr4_4:77756666-77756685 None:intergenic 30.0%
TTCTTCAAACAAGTGAGATA+TGG + chr4_4:77756685-77756704 None:intergenic 30.0%
!!! AGATTTTTGGCAATTAGTGT+TGG - chr4_4:77756708-77756727 Msa0705210:intron 30.0%
!!! GATTTTTGGCAATTAGTGTT+GGG - chr4_4:77756709-77756728 Msa0705210:intron 30.0%
TCTGTCAAAGAATTAACCAA+AGG - chr4_4:77756735-77756754 Msa0705210:intron 30.0%
TCTTCCAAATATATATCGTG+AGG + chr4_4:77756761-77756780 None:intergenic 30.0%
CTCTTACCTTTCTTTATGTT+AGG - chr4_4:77757494-77757513 Msa0705210:intron 30.0%
ATAGTCACATATCACAAGTA+TGG + chr4_4:77757947-77757966 None:intergenic 30.0%
! TACAAACTTTTTATAGGGTG+GGG + chr4_4:77758237-77758256 None:intergenic 30.0%
! CTACAAACTTTTTATAGGGT+GGG + chr4_4:77758238-77758257 None:intergenic 30.0%
! ACTACAAACTTTTTATAGGG+TGG + chr4_4:77758239-77758258 None:intergenic 30.0%
TTGACAAGGGAAAAATATCT+TGG + chr4_4:77758362-77758381 None:intergenic 30.0%
! AGGTGTGATCCATAAATTTT+AGG - chr4_4:77758648-77758667 Msa0705210:intron 30.0%
AAAATGAGGATACTATTGGT+TGG - chr4_4:77758729-77758748 Msa0705210:intron 30.0%
! AAATGAGGATACTATTGGTT+GGG - chr4_4:77758730-77758749 Msa0705210:intron 30.0%
GGTGAAGTTATAAATAGTGT+TGG + chr4_4:77758951-77758970 None:intergenic 30.0%
!! TATACCTATGAGGCTATTTT+TGG + chr4_4:77759057-77759076 None:intergenic 30.0%
AACCAATGAATATACCTATG+AGG + chr4_4:77759067-77759086 None:intergenic 30.0%
GAATATAAATGTCCAGTACA+TGG - chr4_4:77759096-77759115 Msa0705210:intron 30.0%
TTTAATTCCACTTTATGCCA+AGG + chr4_4:77760331-77760350 None:intergenic 30.0%
GGCATAAAGTGGAATTAAAA+TGG - chr4_4:77760332-77760351 Msa0705210:intron 30.0%
ATTACTACTAACTAGCAACT+AGG - chr4_4:77760443-77760462 Msa0705210:intron 30.0%
GTTAGAATTGATATGGTATC+TGG + chr4_4:77760511-77760530 None:intergenic 30.0%
TTGTTATATCATCCTAGACA+GGG + chr4_4:77760558-77760577 None:intergenic 30.0%
! AGCATACATGTTTTCTGTTA+GGG + chr4_4:77760615-77760634 None:intergenic 30.0%
! AAGCATACATGTTTTCTGTT+AGG + chr4_4:77760616-77760635 None:intergenic 30.0%
!! GTTGGTGATTGATAATCAAT+TGG + chr4_4:77760713-77760732 None:intergenic 30.0%
ACGAATTCCAAAATATGAGT+TGG + chr4_4:77755521-77755540 None:intergenic 30.0%
TAACAAAGGAATCAAGAAGA+AGG - chr4_4:77760955-77760974 Msa0705210:CDS 30.0%
CAGTTGAATAACTTACTGTT+GGG + chr4_4:77755744-77755763 None:intergenic 30.0%
TCAGTTGAATAACTTACTGT+TGG + chr4_4:77755745-77755764 None:intergenic 30.0%
! TGAGTTGAAACTACCAAATT+TGG - chr4_4:77761012-77761031 Msa0705210:CDS 30.0%
ATAGTTACGTTCAAAAGCTT+CGG + chr4_4:77761272-77761291 None:intergenic 30.0%
ATGGAGAAGAGGTAAAGTAA+AGG + chr4_4:77755395-77755414 None:intergenic 35.0%
!! GTTGGTGATTGATGATCAAT+TGG + chr4_4:77755463-77755482 None:intergenic 35.0%
ATTCCTTTGTTGACCAATTG+AGG + chr4_4:77755697-77755716 None:intergenic 35.0%
! TGAGTTGAAACTACCAAGTT+TGG - chr4_4:77755762-77755781 Msa0705210:CDS 35.0%
ATACACTCTGTATCCAAACT+TGG + chr4_4:77755778-77755797 None:intergenic 35.0%
AGAGTGTATTATATGCCTCT+CGG - chr4_4:77755789-77755808 Msa0705210:CDS 35.0%
TGGAAACCATGATTGCATTT+AGG + chr4_4:77755847-77755866 None:intergenic 35.0%
TTGTCGAAAGATTGTTGGAT+CGG - chr4_4:77755939-77755958 Msa0705210:CDS 35.0%
!! CTAATAATAGTTTCTGGCAC+CGG + chr4_4:77755985-77756004 None:intergenic 35.0%
GCTTGTTCACTAAAATCTAG+AGG - chr4_4:77756168-77756187 Msa0705210:intron 35.0%
!! CAGTTTGGTGTTTGTCTTTA+AGG + chr4_4:77756322-77756341 None:intergenic 35.0%
CTTAAAGACAAACACCAAAC+TGG - chr4_4:77756320-77756339 Msa0705210:intron 35.0%
! TTCTTTAGGTTTCACCAGTT+TGG + chr4_4:77756337-77756356 None:intergenic 35.0%
!!! TTTACTTTTTGGCTTTGTCG+GGG + chr4_4:77756360-77756379 None:intergenic 35.0%
!!! AGGAAAGTTTTTTCCCATGA+TGG - chr4_4:77756536-77756555 Msa0705210:intron 35.0%
!!! GGAAAGTTTTTTCCCATGAT+GGG - chr4_4:77756537-77756556 Msa0705210:intron 35.0%
TGCTTAAACTTTCCCATCAT+GGG + chr4_4:77756552-77756571 None:intergenic 35.0%
! ATGATGGGAAAGTTTAAGCA+GGG - chr4_4:77756552-77756571 Msa0705210:intron 35.0%
GGTTATTTAATCATGAGGTG+GGG + chr4_4:77756664-77756683 None:intergenic 35.0%
AATATATATCGTGAGGCCTT+TGG + chr4_4:77756754-77756773 None:intergenic 35.0%
AAGGCCTCACGATATATATT+TGG - chr4_4:77756754-77756773 Msa0705210:intron 35.0%
! GTTGCATAATCAAGTTCTGA+TGG + chr4_4:77757099-77757118 None:intergenic 35.0%
AGTTGAGTGTTAATGGAGTT+GGG + chr4_4:77757299-77757318 None:intergenic 35.0%
AAGTTGAGTGTTAATGGAGT+TGG + chr4_4:77757300-77757319 None:intergenic 35.0%
ACCTTGTAGTTCCTTCAATT+TGG - chr4_4:77757347-77757366 Msa0705210:intron 35.0%
ACCAAATTGAAGGAACTACA+AGG + chr4_4:77757351-77757370 None:intergenic 35.0%
CAAGGCTTAAACCAAATTGA+AGG + chr4_4:77757361-77757380 None:intergenic 35.0%
ACTTGGAGAAAAGAAAAGCA+AGG + chr4_4:77757379-77757398 None:intergenic 35.0%
TAGCTCCCTAACATAAAGAA+AGG + chr4_4:77757503-77757522 None:intergenic 35.0%
ATCTTCACTTGAACAATCGT+AGG - chr4_4:77757649-77757668 Msa0705210:intron 35.0%
TCTTCATGCTTCAGTACTAA+AGG - chr4_4:77757742-77757761 Msa0705210:intron 35.0%
GAGAAAACTGAAAAGGAGAA+TGG + chr4_4:77757983-77758002 None:intergenic 35.0%
GTACTTTACAGAAAAGAGTG+TGG + chr4_4:77758213-77758232 None:intergenic 35.0%
! ACAAACTTTTTATAGGGTGG+GGG + chr4_4:77758236-77758255 None:intergenic 35.0%
! AATGAGGATACTATTGGTTG+GGG - chr4_4:77758731-77758750 Msa0705210:intron 35.0%
GTTTAACCCATTGTCACTAA+CGG + chr4_4:77758761-77758780 None:intergenic 35.0%
!! ACTTTAAGGCATCAGAGATA+TGG - chr4_4:77758825-77758844 Msa0705210:intron 35.0%
CATTCCAAAAATAGCCTCAT+AGG - chr4_4:77759050-77759069 Msa0705210:intron 35.0%
AGCCTCATAGGTATATTCAT+TGG - chr4_4:77759062-77759081 Msa0705210:intron 35.0%
AAACGACGTATAATTTGGGA+TGG + chr4_4:77759130-77759149 None:intergenic 35.0%
! TCCCAAATTATACGTCGTTT+TGG - chr4_4:77759130-77759149 Msa0705210:intron 35.0%
CCCAAAACGACGTATAATTT+GGG + chr4_4:77759134-77759153 None:intergenic 35.0%
!! CCCAAATTATACGTCGTTTT+GGG - chr4_4:77759131-77759150 Msa0705210:intron 35.0%
TCCCAAAACGACGTATAATT+TGG + chr4_4:77759135-77759154 None:intergenic 35.0%
AGAACGATAGAGAGAGAAAA+AGG - chr4_4:77759546-77759565 Msa0705210:intron 35.0%
TAACAACCGAAACTTTGACA+AGG - chr4_4:77759725-77759744 Msa0705210:intron 35.0%
TTCTCACCTTGTCAAAGTTT+CGG + chr4_4:77759734-77759753 None:intergenic 35.0%
! CCATATATGTCGTTTGTTTG+AGG + chr4_4:77759821-77759840 None:intergenic 35.0%
CCTCAAACAAACGACATATA+TGG - chr4_4:77759818-77759837 Msa0705210:intron 35.0%
GAGCAAAAGTGAAAGAAGAT+AGG + chr4_4:77759875-77759894 None:intergenic 35.0%
TAACATGAGCCATCGAATTA+TGG + chr4_4:77759954-77759973 None:intergenic 35.0%
! TTTACTTGCAACGTACGTTT+TGG + chr4_4:77760016-77760035 None:intergenic 35.0%
ACAAGTCTGTATTGTGGAAA+AGG + chr4_4:77760051-77760070 None:intergenic 35.0%
TTGGCAACTGGATTTCATAA+TGG + chr4_4:77760296-77760315 None:intergenic 35.0%
AAAGACATAGTGATGATCAG+TGG - chr4_4:77760399-77760418 Msa0705210:intron 35.0%
TGTTATATCATCCTAGACAG+GGG + chr4_4:77760557-77760576 None:intergenic 35.0%
GTTGTTATATCATCCTAGAC+AGG + chr4_4:77760559-77760578 None:intergenic 35.0%
TTGTAGAATCTCACACAAGA+AGG - chr4_4:77760672-77760691 Msa0705210:CDS 35.0%
! GAGTTGGTTGAATTATGGTT+GGG + chr4_4:77760755-77760774 None:intergenic 35.0%
!! TGAGTTGGTTGAATTATGGT+TGG + chr4_4:77760756-77760775 None:intergenic 35.0%
! AGCAAATAAGAGCACACAAT+AGG + chr4_4:77755579-77755598 None:intergenic 35.0%
ATTCCTTTGTTAGCCAATTG+AGG + chr4_4:77760947-77760966 None:intergenic 35.0%
ACACACTCTGTATCCAAATT+TGG + chr4_4:77761028-77761047 None:intergenic 35.0%
TGGAAACCATGATTGCATTT+AGG + chr4_4:77755847-77755866 None:intergenic 35.0%
TTGTCGAAAGATTGTTGGAT+TGG - chr4_4:77755939-77755958 Msa0705210:CDS 35.0%
!! CTAATAATAGTTTCTGGCAC+CGG + chr4_4:77755985-77756004 None:intergenic 35.0%
GAGATTCAACAAGAAGCTCA+TGG + chr4_4:77755414-77755433 None:intergenic 40.0%
TTGTTGAATCTCACGCAAGA+AGG - chr4_4:77755422-77755441 Msa0705210:CDS 40.0%
!!! TGTGGTTTTGTGTGAGAACA+GGG + chr4_4:77755492-77755511 None:intergenic 40.0%
!!! TTGTGGTTTTGTGTGAGAAC+AGG + chr4_4:77755493-77755512 None:intergenic 40.0%
CAACAACAATCCACCTCAAT+TGG - chr4_4:77755681-77755700 Msa0705210:CDS 40.0%
GGAATTCACGAAAGGTGAAA+AGG - chr4_4:77755810-77755829 Msa0705210:CDS 40.0%
ATTTGTCGATGCAACGAACA+TGG + chr4_4:77755867-77755886 None:intergenic 40.0%
! ATGTTCGTTGCATCGACAAA+TGG - chr4_4:77755866-77755885 Msa0705210:CDS 40.0%
CAATCTTTCGACAAGTCTCA+AGG + chr4_4:77755933-77755952 None:intergenic 40.0%
GAGACTTGTCGAAAGATTGT+TGG - chr4_4:77755934-77755953 Msa0705210:CDS 40.0%
! CGGTGCCAGAAACTATTATT+AGG - chr4_4:77755983-77756002 Msa0705210:CDS 40.0%
TCAAAAGCTTCATGGTCTAG+TGG + chr4_4:77756015-77756034 None:intergenic 40.0%
CTGCTTAAACTTTCCCATCA+TGG + chr4_4:77756553-77756572 None:intergenic 40.0%
! CATGATGGGAAAGTTTAAGC+AGG - chr4_4:77756551-77756570 Msa0705210:intron 40.0%
TCATGCTTCAGTACTAAAGG+TGG - chr4_4:77757745-77757764 Msa0705210:intron 40.0%
CATGCTTCAGTACTAAAGGT+GGG - chr4_4:77757746-77757765 Msa0705210:intron 40.0%
! TTCAGTACTAAAGGTGGGTT+AGG - chr4_4:77757751-77757770 Msa0705210:intron 40.0%
GTCACATATCACAAGTATGG+TGG + chr4_4:77757944-77757963 None:intergenic 40.0%
! CAAACTTTTTATAGGGTGGG+GGG + chr4_4:77758235-77758254 None:intergenic 40.0%
! ATGGATGAAGTACCATGTAC+TGG + chr4_4:77759111-77759130 None:intergenic 40.0%
TAACTGTATGCATGTCGATG+TGG + chr4_4:77759707-77759726 None:intergenic 40.0%
AAGTGGACAAGTCTGTATTG+TGG + chr4_4:77760057-77760076 None:intergenic 40.0%
ACAATACAGACTTGTCCACT+TGG - chr4_4:77760056-77760075 Msa0705210:intron 40.0%
CTGTGTCTCTTTCTCTCATA+GGG - chr4_4:77760079-77760098 Msa0705210:intron 40.0%
! TATTCCTTTATGGGCTTGCT+GGG - chr4_4:77760187-77760206 Msa0705210:intron 40.0%
ACTTTATGCCAAGGAGAATG+TGG + chr4_4:77760322-77760341 None:intergenic 40.0%
ACATTCTCCTTGGCATAAAG+TGG - chr4_4:77760321-77760340 Msa0705210:intron 40.0%
CTATATATAGTCCCCTGTCT+AGG - chr4_4:77760543-77760562 Msa0705210:intron 40.0%
TTCTGTTAGGGAACTTGATG+AGG + chr4_4:77760603-77760622 None:intergenic 40.0%
ATGGAAGAGTGGTGAAGTAA+AGG + chr4_4:77760645-77760664 None:intergenic 40.0%
GAGATTCTACAAGAAGCTCA+TGG + chr4_4:77760664-77760683 None:intergenic 40.0%
TTGCCCTAAACTCCATCATA+AGG - chr4_4:77760852-77760871 Msa0705210:intron 40.0%
! GCACCTTATGATGGAGTTTA+GGG + chr4_4:77760858-77760877 None:intergenic 40.0%
CAACAACTCTTCACCTCAAT+TGG - chr4_4:77760931-77760950 Msa0705210:CDS 40.0%
TCACCTCAATTGGCTAACAA+AGG - chr4_4:77760941-77760960 Msa0705210:CDS 40.0%
TGTCTCTCAGAGTTCACAAA+AGG - chr4_4:77761052-77761071 Msa0705210:intron 40.0%
ATTTGTCGATGCAACGAACA+TGG + chr4_4:77755867-77755886 None:intergenic 40.0%
! ATGTTCGTTGCATCGACAAA+TGG - chr4_4:77755866-77755885 Msa0705210:CDS 40.0%
CAATCTTTCGACAAGTCTCA+AGG + chr4_4:77755933-77755952 None:intergenic 40.0%
GAGACTTGTCGAAAGATTGT+TGG - chr4_4:77755934-77755953 Msa0705210:CDS 40.0%
! CGGTGCCAGAAACTATTATT+AGG - chr4_4:77755983-77756002 Msa0705210:CDS 40.0%
ACAAGAAGCTCATGGAGAAG+AGG + chr4_4:77755406-77755425 None:intergenic 45.0%
!!! GTGGTTTTGTGTGAGAACAG+GGG + chr4_4:77755491-77755510 None:intergenic 45.0%
CCTTTGTTGACCAATTGAGG+TGG + chr4_4:77755694-77755713 None:intergenic 45.0%
CCACCTCAATTGGTCAACAA+AGG - chr4_4:77755691-77755710 Msa0705210:CDS 45.0%
TCTTTCGACAAGTCTCAAGG+AGG + chr4_4:77755930-77755949 None:intergenic 45.0%
TTGTGGGTGGGGTTTAGTAT+GGG - chr4_4:77756511-77756530 Msa0705210:intron 45.0%
TCCAAGTTACAGTGACGTGT+GGG - chr4_4:77757392-77757411 Msa0705210:intron 45.0%
!! TAGGTGCTGTTGTGAGAAAG+TGG - chr4_4:77757770-77757789 Msa0705210:intron 45.0%
!! AGGTGCTGTTGTGAGAAAGT+GGG - chr4_4:77757771-77757790 Msa0705210:intron 45.0%
GGAAACTTCTTTCCCACCAT+GGG + chr4_4:77757905-77757924 None:intergenic 45.0%
AGGAAACTTCTTTCCCACCA+TGG + chr4_4:77757906-77757925 None:intergenic 45.0%
GGAAAGAAGTTTCCTTTCCC+AGG - chr4_4:77757911-77757930 Msa0705210:intron 45.0%
AGTATGGTGGCATTTAGCCT+GGG + chr4_4:77757931-77757950 None:intergenic 45.0%
AAGTATGGTGGCATTTAGCC+TGG + chr4_4:77757932-77757951 None:intergenic 45.0%
GGAGAACCGTTAGTGACAAT+GGG - chr4_4:77758752-77758771 Msa0705210:intron 45.0%
TGTATGCATGTCGATGTGGA+TGG + chr4_4:77759703-77759722 None:intergenic 45.0%
!! TCACTTTTGCTCTTGTGACG+TGG - chr4_4:77759883-77759902 Msa0705210:intron 45.0%
ATCCAACGGCCATAATTCGA+TGG - chr4_4:77759942-77759961 Msa0705210:intron 45.0%
GCTGTGTCTCTTTCTCTCAT+AGG - chr4_4:77760078-77760097 Msa0705210:intron 45.0%
CTATTCCTTTATGGGCTTGC+TGG - chr4_4:77760186-77760205 Msa0705210:intron 45.0%
! TTGCTGGGTCCTTTGTTTAG+CGG - chr4_4:77760202-77760221 Msa0705210:intron 45.0%
!! TGCTGTTTCCCGCTAAACAA+AGG + chr4_4:77760214-77760233 None:intergenic 45.0%
TGTTAGGGAACTTGATGAGG+TGG + chr4_4:77760600-77760619 None:intergenic 45.0%
ACAAGAAGCTCATGGAAGAG+TGG + chr4_4:77760656-77760675 None:intergenic 45.0%
TATGGTTGGGTGTGAGAACA+GGG + chr4_4:77760742-77760761 None:intergenic 45.0%
TTATGGTTGGGTGTGAGAAC+AGG + chr4_4:77760743-77760762 None:intergenic 45.0%
! CGCACCTTATGATGGAGTTT+AGG + chr4_4:77760859-77760878 None:intergenic 45.0%
CCTTAAAGCGCACCTTATGA+TGG + chr4_4:77760867-77760886 None:intergenic 45.0%
CCATCATAAGGTGCGCTTTA+AGG - chr4_4:77760864-77760883 Msa0705210:intron 45.0%
TCGAACGTAGCCCTAAACAA+CGG - chr4_4:77760890-77760909 Msa0705210:intron 45.0%
CGAAGAAGAGCCGTTGTTTA+GGG + chr4_4:77760903-77760922 None:intergenic 45.0%
TCGAAGAAGAGCCGTTGTTT+AGG + chr4_4:77760904-77760923 None:intergenic 45.0%
TCTTTCGACAAGTCTCAAGG+AGG + chr4_4:77755930-77755949 None:intergenic 45.0%
!! TGTATATATAAATTTATATA+TGG + chr4_4:77756110-77756129 None:intergenic 5.0%
!! ATAAAAAAATAATATATCTA+TGG + chr4_4:77756578-77756597 None:intergenic 5.0%
!!! ATATTATTTTTTTATTTCAA+CGG - chr4_4:77756583-77756602 Msa0705210:intron 5.0%
!!! GATTTAATTTTTTTTTTTTA+AGG + chr4_4:77758156-77758175 None:intergenic 5.0%
TGCCTCTCGGAATTCACGAA+AGG - chr4_4:77755802-77755821 Msa0705210:CDS 50.0%
CACCTTTCGTGAATTCCGAG+AGG + chr4_4:77755807-77755826 None:intergenic 50.0%
!! AGGAGGCATTGTCTGCACTT+GGG + chr4_4:77755913-77755932 None:intergenic 50.0%
!! AAGGAGGCATTGTCTGCACT+TGG + chr4_4:77755914-77755933 None:intergenic 50.0%
!! TGGCTTTGTCGGGGTTCTTT+AGG + chr4_4:77756351-77756370 None:intergenic 50.0%
CTTGTGGGTGGGGTTTAGTA+TGG - chr4_4:77756510-77756529 Msa0705210:intron 50.0%
GGTGGGGTTTAGTATGGGAA+AGG - chr4_4:77756516-77756535 Msa0705210:intron 50.0%
AGTGGACATGGTCGTAGTGT+TGG + chr4_4:77757267-77757286 None:intergenic 50.0%
GGGTGAAGAAGAAGTGGACA+TGG + chr4_4:77757279-77757298 None:intergenic 50.0%
GGAGTTGGGTGAAGAAGAAG+TGG + chr4_4:77757285-77757304 None:intergenic 50.0%
CTCCAAGTTACAGTGACGTG+TGG - chr4_4:77757391-77757410 Msa0705210:intron 50.0%
TCCCACACGTCACTGTAACT+TGG + chr4_4:77757396-77757415 None:intergenic 50.0%
TTACAGTGACGTGTGGGATG+TGG - chr4_4:77757398-77757417 Msa0705210:intron 50.0%
TACAGTGACGTGTGGGATGT+GGG - chr4_4:77757399-77757418 Msa0705210:intron 50.0%
TGCTGTTGTGAGAAAGTGGG+AGG - chr4_4:77757774-77757793 Msa0705210:intron 50.0%
CTACAGCTGTCCTGGAGAAA+GGG - chr4_4:77757874-77757893 Msa0705210:intron 50.0%
ATGGGAAAGTCCCTTTCTCC+AGG + chr4_4:77757887-77757906 None:intergenic 50.0%
TGGAGAAAGGGACTTTCCCA+TGG - chr4_4:77757886-77757905 Msa0705210:intron 50.0%
AGAAAGGGACTTTCCCATGG+TGG - chr4_4:77757889-77757908 Msa0705210:intron 50.0%
GAAAGGGACTTTCCCATGGT+GGG - chr4_4:77757890-77757909 Msa0705210:intron 50.0%
GGGAGAACCGTTAGTGACAA+TGG - chr4_4:77758751-77758770 Msa0705210:intron 50.0%
AGCCATCGAATTATGGCCGT+TGG + chr4_4:77759947-77759966 None:intergenic 50.0%
GAGAAAGAGACACAGCCAAG+TGG + chr4_4:77760074-77760093 None:intergenic 50.0%
! TGCTGGGTCCTTTGTTTAGC+GGG - chr4_4:77760203-77760222 Msa0705210:intron 50.0%
AGAATGTGGCGATTGGCAAC+TGG + chr4_4:77760308-77760327 None:intergenic 50.0%
ATGGTTGGGTGTGAGAACAG+GGG + chr4_4:77760741-77760760 None:intergenic 50.0%
TCAAAAGCTTCGGCGTCTAG+CGG + chr4_4:77761262-77761281 None:intergenic 50.0%
GTGAGAACAGGGGACGTTGT+TGG + chr4_4:77755481-77755500 None:intergenic 55.0%
!! GGAGGCATTGTCTGCACTTG+GGG + chr4_4:77755912-77755931 None:intergenic 55.0%
!! GTTTCTGGCACCGGCAACAT+AGG + chr4_4:77755976-77755995 None:intergenic 55.0%
GGACAGCTGTAGGTTGCAAC+TGG + chr4_4:77757866-77757885 None:intergenic 55.0%
GTTGCAACCTACAGCTGTCC+TGG - chr4_4:77757866-77757885 Msa0705210:intron 55.0%
CCTTTCTCCAGGACAGCTGT+AGG + chr4_4:77757876-77757895 None:intergenic 55.0%
CCTACAGCTGTCCTGGAGAA+AGG - chr4_4:77757873-77757892 Msa0705210:intron 55.0%
GGTGGCATTTAGCCTGGGAA+AGG + chr4_4:77757926-77757945 None:intergenic 55.0%
AGGACCCAGCAAGCCCATAA+AGG + chr4_4:77760194-77760213 None:intergenic 55.0%
GCCAATCGCCACATTCTCCT+TGG - chr4_4:77760311-77760330 Msa0705210:intron 55.0%
GCCAAGGAGAATGTGGCGAT+TGG + chr4_4:77760315-77760334 None:intergenic 55.0%
!! AGGAGGCACTGTCTGCACTT+AGG + chr4_4:77761163-77761182 None:intergenic 55.0%
!! GGAAGCACCACCTATGTTGC+CGG - chr4_4:77761210-77761229 Msa0705210:CDS 55.0%
!! GTTTCTGGCACCGGCAACAT+AGG + chr4_4:77755976-77755995 None:intergenic 55.0%
AGCACCGCCTCCTATGTTGC+CGG - chr4_4:77755963-77755982 Msa0705210:CDS 60.0%
!! TCTGGCACCGGCAACATAGG+AGG + chr4_4:77755973-77755992 None:intergenic 60.0%
GTGAGAACAGGGGAGCTGGT+TGG + chr4_4:77760731-77760750 None:intergenic 60.0%
!! TCTGGCACCGGCAACATAGG+TGG + chr4_4:77755973-77755992 None:intergenic 60.0%
!! GGCACCGGCAACATAGGAGG+CGG + chr4_4:77755970-77755989 None:intergenic 65.0%
GGGTGTGAGAACAGGGGAGC+TGG + chr4_4:77760735-77760754 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 77755376 77761306 77755376 ID=Msa0705210;Name=Msa0705210
chr4_4 mRNA 77755376 77761306 77755376 ID=Msa0705210-mRNA-1;Parent=Msa0705210;Name=Msa0705210-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|0|0|4|0|425
chr4_4 exon 77761101 77761306 77761101 ID=Msa0705210-mRNA-1:exon:24755;Parent=Msa0705210-mRNA-1
chr4_4 exon 77760904 77761058 77760904 ID=Msa0705210-mRNA-1:exon:24754;Parent=Msa0705210-mRNA-1
chr4_4 exon 77760628 77760858 77760628 ID=Msa0705210-mRNA-1:exon:24753;Parent=Msa0705210-mRNA-1
chr4_4 exon 77755376 77756061 77755376 ID=Msa0705210-mRNA-1:exon:24752;Parent=Msa0705210-mRNA-1
chr4_4 CDS 77761101 77761306 77761101 ID=Msa0705210-mRNA-1:cds;Parent=Msa0705210-mRNA-1
chr4_4 CDS 77760904 77761058 77760904 ID=Msa0705210-mRNA-1:cds;Parent=Msa0705210-mRNA-1
chr4_4 CDS 77760628 77760858 77760628 ID=Msa0705210-mRNA-1:cds;Parent=Msa0705210-mRNA-1
chr4_4 CDS 77755376 77756061 77755376 ID=Msa0705210-mRNA-1:cds;Parent=Msa0705210-mRNA-1
Gene Sequence

>Msa0705210

ATGTATGCTTCTACTTCCTTTACTTTACCTCTTCTCCATGAGCTTCTTGTTGAATCTCACGCAAGAAGGTTGCTCTTCCAAAATCCAATTGATCATCAATCACCAACAACGTCCCCTGTTCTCACACAAAACCACAATTCAACTAACTCATATTTTGGAATTCGTGTACTTGATGCAAATGTTGTGATGATACTTGCAGTTCTATTGCGTGCCTTAAGATTTTTAAATGTAGCTCTCAACAACGACTCTTCTTCGAGTTCAAGCAACAACAATCCACCTCAATTGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTCCCAACAGTAAGTTATTCAACTGAGTTGAAACTACCAAGTGAAAAGGTGCGCATTTTGCCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACATTCATCATGCCCCAAGTGCAGACAATGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATCGGAAGCACCGCCTCCTATGTTGCCGGTGCCAGAAACTATTATTAGGATTCAGCCACTAGACCATGAAGCTTTTGAATGTAACTATAGGGAAGAAAAAAACATGTATGCTTCTACTTCCTTTACTTCACCACTCTTCCATGAGCTTCTTGTAGAATCTCACACAAGAAGGTTGCTCTTCCAAAATCCAATTGATTATCAATCACCAACCAGCTCCCCTGTTCTCACACCCAACCATAATTCAACCAACTCATATTTTGGAATTCGTGAATTTGATGCGAATGTTGTGATGATACTTGCAGTCCTATTGTGTGCTCTTATTTGCTCACTTGCCCTAAACTCCATCATAAGGTGCGCTTTAAGGTTTTCGAACGTAGCCCTAAACAACGGCTCTTCTTCGAGTTCAAGCAACAACTCTTCACCTCAATTGGCTAACAAAGGAATCAAGAAGAAGGCTCTCAAGACATTCCCAACAGTAAGTTATTCAACTGAGTTGAAACTACCAAATTTGGATACAGAGTGTGTGATATGTCTCTCAGAGTTCACAAAAGGTGAAAAAGTGCGCATTTTACCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACACTCATCATGTCCTAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATTGGAAGCACCACCTATGTTGCCGGTGCCAGAAACTATTATTAGGATTCAACCGCTAGACGCCGAAGCTTTTGAACGTAACTATAGAGAATTAAGCTGA
Protein sequence

>Msa0705210

MYASTSFTLPLLHELLVESHARRLLFQNPIDHQSPTTSPVLTQNHNSTNSYFGIRVLDANVVMILAVLLRALRFLNVALNNDSSSSSSNNNPPQLVNKGIKKKALKTFPTVSYSTELKLPSEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGSEAPPPMLPVPETIIRIQPLDHEAFECNYREEKNMYASTSFTSPLFHELLVESHTRRLLFQNPIDYQSPTSSPVLTPNHNSTNSYFGIREFDANVVMILAVLLCALICSLALNSIIRCALRFSNVALNNGSSSSSSNNSSPQLANKGIKKKALKTFPTVSYSTELKLPNLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGLEAPPMLPVPETIIRIQPLDAEAFERNYRELS*