Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426490 | XP_013461473.1 | 97.831 | 415 | 9 | 0 | 1 | 415 | 1 | 415 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426490 | sp|Q0WPK3|AT18D_ARATH | 74.227 | 388 | 89 | 2 | 27 | 414 | 10 | 386 | 0.0 | 597 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426490 | A0A072V2C7 | 97.831 | 415 | 9 | 0 | 1 | 415 | 1 | 415 | 0.0 | 850 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0426490 | -0.803152 | 3.995313e-49 | -8.615850e-47 |
| Msa0021240 | Msa0426490 | -0.808809 | 2.580015e-50 | -8.615850e-47 |
| Msa0027020 | Msa0426490 | -0.801767 | 7.710190e-49 | -8.615850e-47 |
| Msa0042520 | Msa0426490 | -0.810032 | 1.410226e-50 | -8.615850e-47 |
| Msa0044700 | Msa0426490 | -0.800789 | 1.222126e-48 | -8.615850e-47 |
| Msa0046020 | Msa0426490 | -0.815818 | 7.606466e-52 | -8.615850e-47 |
| Msa0052780 | Msa0426490 | 0.822852 | 1.897990e-53 | -8.615850e-47 |
| Msa0067370 | Msa0426490 | -0.801258 | 9.802899e-49 | -8.615850e-47 |
| Msa0069070 | Msa0426490 | -0.807303 | 5.398070e-50 | -8.615850e-47 |
| Msa0074860 | Msa0426490 | -0.805746 | 1.150080e-49 | -8.615850e-47 |
| Msa0075990 | Msa0426490 | -0.839607 | 1.432218e-57 | -8.615850e-47 |
| Msa0097570 | Msa0426490 | 0.817268 | 3.600744e-52 | -8.615850e-47 |
| Msa0113910 | Msa0426490 | -0.802904 | 4.496365e-49 | -8.615850e-47 |
| Msa0124460 | Msa0426490 | -0.808609 | 2.847720e-50 | -8.615850e-47 |
| Msa0127110 | Msa0426490 | -0.807800 | 4.233997e-50 | -8.615850e-47 |
| Msa0127350 | Msa0426490 | -0.820927 | 5.296456e-53 | -8.615850e-47 |
| Msa0138340 | Msa0426490 | -0.801897 | 7.247182e-49 | -8.615850e-47 |
| Msa0141410 | Msa0426490 | 0.812727 | 3.664900e-51 | -8.615850e-47 |
| Msa0145590 | Msa0426490 | -0.830597 | 2.685489e-55 | -8.615850e-47 |
| Msa0147960 | Msa0426490 | -0.802775 | 4.779617e-49 | -8.615850e-47 |
| Msa0163170 | Msa0426490 | -0.809571 | 1.771429e-50 | -8.615850e-47 |
| Msa0167160 | Msa0426490 | -0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0168770 | Msa0426490 | -0.828797 | 7.362289e-55 | -8.615850e-47 |
| Msa0168950 | Msa0426490 | -0.805518 | 1.284261e-49 | -8.615850e-47 |
| Msa0186400 | Msa0426490 | -0.802226 | 6.203825e-49 | -8.615850e-47 |
| Msa0197170 | Msa0426490 | 0.803586 | 3.248431e-49 | -8.615850e-47 |
| Msa0219720 | Msa0426490 | -0.817732 | 2.830625e-52 | -8.615850e-47 |
| Msa0225080 | Msa0426490 | -0.802123 | 6.513733e-49 | -8.615850e-47 |
| Msa0237690 | Msa0426490 | -0.801297 | 9.624160e-49 | -8.615850e-47 |
| Msa0369990 | Msa0426490 | 0.812865 | 3.419692e-51 | -8.615850e-47 |
| Msa0380470 | Msa0426490 | -0.810653 | 1.035727e-50 | -8.615850e-47 |
| Msa0382050 | Msa0426490 | -0.814517 | 1.479668e-51 | -8.615850e-47 |
| Msa0382510 | Msa0426490 | 0.805832 | 1.103408e-49 | -8.615850e-47 |
| Msa0384140 | Msa0426490 | -0.814424 | 1.551596e-51 | -8.615850e-47 |
| Msa0386230 | Msa0426490 | -0.803711 | 3.059708e-49 | -8.615850e-47 |
| Msa0417790 | Msa0426490 | -0.842277 | 2.853512e-58 | -8.615850e-47 |
| Msa0426490 | Msa0428300 | -0.812818 | 3.500579e-51 | -8.615850e-47 |
| Msa0426490 | Msa0428720 | -0.817337 | 3.474179e-52 | -8.615850e-47 |
| Msa0426490 | Msa0429990 | -0.801416 | 9.098749e-49 | -8.615850e-47 |
| Msa0426490 | Msa0431550 | -0.816969 | 4.203168e-52 | -8.615850e-47 |
| Msa0426490 | Msa0434280 | -0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0426490 | Msa0434830 | -0.812274 | 4.603574e-51 | -8.615850e-47 |
| Msa0426490 | Msa0436660 | -0.820001 | 8.637503e-53 | -8.615850e-47 |
| Msa0426490 | Msa0437820 | -0.815148 | 1.072247e-51 | -8.615850e-47 |
| Msa0426490 | Msa0439090 | -0.810023 | 1.416473e-50 | -8.615850e-47 |
| Msa0426490 | Msa0439120 | -0.816087 | 6.625387e-52 | -8.615850e-47 |
| Msa0426490 | Msa0439130 | -0.805143 | 1.538650e-49 | -8.615850e-47 |
| Msa0426490 | Msa0444770 | -0.829095 | 6.233423e-55 | -8.615850e-47 |
| Msa0426490 | Msa0473000 | 0.910741 | 1.333947e-82 | -8.615850e-47 |
| Msa0426490 | Msa0474290 | -0.831282 | 1.823870e-55 | -8.615850e-47 |
| Msa0426490 | Msa0474660 | -0.802516 | 5.406505e-49 | -8.615850e-47 |
| Msa0426490 | Msa0475080 | -0.805423 | 1.344470e-49 | -8.615850e-47 |
| Msa0426490 | Msa0476560 | -0.815376 | 9.541820e-52 | -8.615850e-47 |
| Msa0426490 | Msa0476600 | -0.804637 | 1.963578e-49 | -8.615850e-47 |
| Msa0426490 | Msa0492330 | -0.832098 | 1.147385e-55 | -8.615850e-47 |
| Msa0426490 | Msa0500580 | -0.807943 | 3.948909e-50 | -8.615850e-47 |
| Msa0426490 | Msa0506700 | -0.800551 | 1.366694e-48 | -8.615850e-47 |
| Msa0426490 | Msa0517200 | 0.893633 | 5.243265e-75 | -8.615850e-47 |
| Msa0426490 | Msa0518150 | -0.815790 | 7.716412e-52 | -8.615850e-47 |
| Msa0426490 | Msa0518720 | -0.832172 | 1.099989e-55 | -8.615850e-47 |
| Msa0426490 | Msa0519070 | -0.813248 | 2.818172e-51 | -8.615850e-47 |
| Msa0426490 | Msa0527210 | -0.804573 | 2.024989e-49 | -8.615850e-47 |
| Msa0426490 | Msa0527420 | -0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa0426490 | Msa0531050 | 0.816765 | 4.672325e-52 | -8.615850e-47 |
| Msa0426490 | Msa0531270 | -0.816851 | 4.468418e-52 | -8.615850e-47 |
| Msa0426490 | Msa0548420 | 0.807455 | 5.012221e-50 | -8.615850e-47 |
| Msa0426490 | Msa0550980 | -0.808197 | 3.485544e-50 | -8.615850e-47 |
| Msa0426490 | Msa0567190 | -0.837519 | 4.956463e-57 | -8.615850e-47 |
| Msa0426490 | Msa0576480 | -0.803123 | 4.050949e-49 | -8.615850e-47 |
| Msa0426490 | Msa0576550 | -0.803366 | 3.607763e-49 | -8.615850e-47 |
| Msa0426490 | Msa0578400 | -0.822275 | 2.585068e-53 | -8.615850e-47 |
| Msa0426490 | Msa0580890 | -0.812749 | 3.624728e-51 | -8.615850e-47 |
| Msa0426490 | Msa0581350 | 0.804971 | 1.672241e-49 | -8.615850e-47 |
| Msa0426490 | Msa0583270 | -0.816320 | 5.877476e-52 | -8.615850e-47 |
| Msa0426490 | Msa0588110 | -0.805741 | 1.152885e-49 | -8.615850e-47 |
| Msa0426490 | Msa0605150 | -0.824349 | 8.470587e-54 | -8.615850e-47 |
| Msa0426490 | Msa0606340 | -0.809517 | 1.819509e-50 | -8.615850e-47 |
| Msa0426490 | Msa0608720 | -0.806294 | 8.820866e-50 | -8.615850e-47 |
| Msa0426490 | Msa0615070 | 0.812737 | 3.647594e-51 | -8.615850e-47 |
| Msa0426490 | Msa0621870 | -0.812229 | 4.709671e-51 | -8.615850e-47 |
| Msa0426490 | Msa0622800 | -0.823808 | 1.134890e-53 | -8.615850e-47 |
| Msa0426490 | Msa0626920 | 0.810526 | 1.103141e-50 | -8.615850e-47 |
| Msa0426490 | Msa0628440 | -0.800457 | 1.428634e-48 | -8.615850e-47 |
| Msa0426490 | Msa0660160 | -0.815640 | 8.335907e-52 | -8.615850e-47 |
| Msa0426490 | Msa0685810 | -0.804638 | 1.961940e-49 | -8.615850e-47 |
| Msa0426490 | Msa0685860 | -0.810273 | 1.251228e-50 | -8.615850e-47 |
| Msa0426490 | Msa0690100 | -0.804953 | 1.686523e-49 | -8.615850e-47 |
| Msa0426490 | Msa0707860 | -0.804132 | 2.501839e-49 | -8.615850e-47 |
| Msa0426490 | Msa0708450 | -0.813436 | 2.562090e-51 | -8.615850e-47 |
| Msa0426490 | Msa0713570 | -0.813893 | 2.032887e-51 | -8.615850e-47 |
| Msa0426490 | Msa0755550 | -0.811474 | 6.874586e-51 | -8.615850e-47 |
| Msa0426490 | Msa0758880 | -0.813016 | 3.168197e-51 | -8.615850e-47 |
| Msa0426490 | Msa0793130 | -0.815676 | 8.182876e-52 | -8.615850e-47 |
| Msa0426490 | Msa0797180 | -0.818983 | 1.474052e-52 | -8.615850e-47 |
| Msa0426490 | Msa0801920 | -0.810427 | 1.159237e-50 | -8.615850e-47 |
| Msa0426490 | Msa0820130 | -0.806967 | 6.359415e-50 | -8.615850e-47 |
| Msa0426490 | Msa0829250 | -0.812717 | 3.682968e-51 | -8.615850e-47 |
| Msa0426490 | Msa0829990 | 0.801357 | 9.353736e-49 | -8.615850e-47 |
| Msa0426490 | Msa0835050 | -0.813779 | 2.153220e-51 | -8.615850e-47 |
| Msa0426490 | Msa0838120 | -0.809890 | 1.512923e-50 | -8.615850e-47 |
| Msa0426490 | Msa0868500 | -0.810497 | 1.119290e-50 | -8.615850e-47 |
| Msa0426490 | Msa0868510 | -0.814521 | 1.476823e-51 | -8.615850e-47 |
| Msa0426490 | Msa0868520 | -0.816481 | 5.409457e-52 | -8.615850e-47 |
| Msa0426490 | Msa0873910 | 0.821574 | 3.755617e-53 | -8.615850e-47 |
| Msa0426490 | Msa0876680 | -0.813428 | 2.572785e-51 | -8.615850e-47 |
| Msa0426490 | Msa0929440 | -0.809341 | 1.984814e-50 | -8.615850e-47 |
| Msa0426490 | Msa0933320 | -0.812682 | 3.748997e-51 | -8.615850e-47 |
| Msa0426490 | Msa0941410 | -0.815966 | 7.051929e-52 | -8.615850e-47 |
| Msa0426490 | Msa0941420 | -0.820825 | 5.590552e-53 | -8.615850e-47 |
| Msa0426490 | Msa0967890 | -0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0426490 | Msa0971100 | -0.813914 | 2.010915e-51 | -8.615850e-47 |
| Msa0426490 | Msa0973010 | -0.811576 | 6.532483e-51 | -8.615850e-47 |
| Msa0426490 | Msa0978540 | -0.807987 | 3.864165e-50 | -8.615850e-47 |
| Msa0426490 | Msa0978550 | -0.814439 | 1.539701e-51 | -8.615850e-47 |
| Msa0426490 | Msa0978560 | -0.816191 | 6.279931e-52 | -8.615850e-47 |
| Msa0426490 | Msa1016580 | -0.814931 | 1.198227e-51 | -8.615850e-47 |
| Msa0426490 | Msa1026970 | 0.814053 | 1.874309e-51 | -8.615850e-47 |
| Msa0426490 | Msa1028150 | 0.823850 | 1.109368e-53 | -8.615850e-47 |
| Msa0426490 | Msa1028890 | -0.801808 | 7.560195e-49 | -8.615850e-47 |
| Msa0426490 | Msa1031190 | -0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa0426490 | Msa1031620 | -0.801083 | 1.064477e-48 | -8.615850e-47 |
| Msa0426490 | Msa1050900 | 0.809959 | 1.461863e-50 | -8.615850e-47 |
| Msa0426490 | Msa1050970 | 0.843448 | 1.392394e-58 | -8.615850e-47 |
| Msa0426490 | Msa1062060 | 0.823744 | 1.174670e-53 | -8.615850e-47 |
| Msa0426490 | Msa1066770 | 0.835922 | 1.265666e-56 | -8.615850e-47 |
| Msa0426490 | Msa1067000 | 0.843706 | 1.187816e-58 | -8.615850e-47 |
| Msa0426490 | Msa1070370 | -0.807750 | 4.339165e-50 | -8.615850e-47 |
| Msa0426490 | Msa1074550 | 0.809694 | 1.666921e-50 | -8.615850e-47 |
| Msa0426490 | Msa1091450 | -0.826096 | 3.271777e-54 | -8.615850e-47 |
| Msa0426490 | Msa1102410 | -0.824362 | 8.411574e-54 | -8.615850e-47 |
| Msa0426490 | Msa1107220 | 0.823174 | 1.596603e-53 | -8.615850e-47 |
| Msa0426490 | Msa1111860 | 0.802419 | 5.661123e-49 | -8.615850e-47 |
| Msa0426490 | Msa1112190 | 0.830840 | 2.341388e-55 | -8.615850e-47 |
| Msa0426490 | Msa1112210 | -0.800198 | 1.612441e-48 | -8.615850e-47 |
| Msa0426490 | Msa1119420 | -0.804428 | 2.170818e-49 | -8.615850e-47 |
| Msa0426490 | Msa1121720 | -0.810275 | 1.249641e-50 | -8.615850e-47 |
| Msa0426490 | Msa1129540 | 0.812512 | 4.084903e-51 | -8.615850e-47 |
| Msa0426490 | Msa1130850 | -0.818564 | 1.835472e-52 | -8.615850e-47 |
| Msa0426490 | Msa1130910 | -0.810671 | 1.026563e-50 | -8.615850e-47 |
| Msa0426490 | Msa1134800 | -0.809062 | 2.278490e-50 | -8.615850e-47 |
| Msa0426490 | Msa1134840 | -0.804461 | 2.136793e-49 | -8.615850e-47 |
| Msa0426490 | Msa1146010 | 0.810816 | 9.551213e-51 | -8.615850e-47 |
| Msa0426490 | Msa1150760 | 0.813234 | 2.838001e-51 | -8.615850e-47 |
| Msa0426490 | Msa1154310 | 0.814935 | 1.195463e-51 | -8.615850e-47 |
| Msa0426490 | Msa1158180 | -0.806292 | 8.830974e-50 | -8.615850e-47 |
| Msa0426490 | Msa1173150 | 0.819440 | 1.160101e-52 | -8.615850e-47 |
| Msa0426490 | Msa1184100 | -0.801333 | 9.459870e-49 | -8.615850e-47 |
| Msa0426490 | Msa1185270 | 0.830635 | 2.628894e-55 | -8.615850e-47 |
| Msa0426490 | Msa1191530 | -0.803089 | 4.116298e-49 | -8.615850e-47 |
| Msa0426490 | Msa1197740 | -0.833048 | 6.671234e-56 | -8.615850e-47 |
| Msa0426490 | Msa1207660 | -0.819579 | 1.078485e-52 | -8.615850e-47 |
| Msa0426490 | Msa1207770 | -0.816249 | 6.095422e-52 | -8.615850e-47 |
| Msa0426490 | Msa1212210 | -0.815189 | 1.050371e-51 | -8.615850e-47 |
| Msa0426490 | Msa1218310 | -0.817089 | 3.950912e-52 | -8.615850e-47 |
| Msa0426490 | Msa1218350 | -0.815236 | 1.024966e-51 | -8.615850e-47 |
| Msa0426490 | Msa1223520 | -0.808433 | 3.104962e-50 | -8.615850e-47 |
| Msa0426490 | Msa1225240 | -0.804914 | 1.718517e-49 | -8.615850e-47 |
| Msa0426490 | Msa1225280 | -0.827133 | 1.851116e-54 | -8.615850e-47 |
| Msa0426490 | Msa1236120 | -0.810954 | 8.913371e-51 | -8.615850e-47 |
| Msa0426490 | Msa1236190 | -0.814559 | 1.448289e-51 | -8.615850e-47 |
| Msa0426490 | Msa1239190 | 0.812355 | 4.420757e-51 | -8.615850e-47 |
| Msa0426490 | Msa1239210 | 0.829482 | 5.021319e-55 | -8.615850e-47 |
| Msa0426490 | Msa1251440 | -0.835564 | 1.559257e-56 | -8.615850e-47 |
| Msa0426490 | Msa1257860 | -0.812372 | 4.381732e-51 | -8.615850e-47 |
| Msa0426490 | Msa1265990 | -0.804103 | 2.536800e-49 | -8.615850e-47 |
| Msa0426490 | Msa1266750 | -0.819036 | 1.433955e-52 | -8.615850e-47 |
| Msa0426490 | Msa1270860 | -0.802159 | 6.404419e-49 | -8.615850e-47 |
| Msa0426490 | Msa1292060 | -0.815860 | 7.445836e-52 | -8.615850e-47 |
| Msa0426490 | Msa1301610 | -0.805046 | 1.612265e-49 | -8.615850e-47 |
| Msa0426490 | Msa1303620 | -0.829806 | 4.189272e-55 | -8.615850e-47 |
| Msa0426490 | Msa1303690 | -0.822713 | 2.044283e-53 | -8.615850e-47 |
| Msa0426490 | Msa1317090 | -0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa0426490 | Msa1331530 | -0.815889 | 7.335869e-52 | -8.615850e-47 |
| Msa0426490 | Msa1331570 | -0.810025 | 1.415156e-50 | -8.615850e-47 |
| Msa0426490 | Msa1341710 | -0.811413 | 7.089942e-51 | -8.615850e-47 |
| Msa0426490 | Msa1348180 | -0.806733 | 7.128733e-50 | -8.615850e-47 |
| Msa0426490 | Msa1350130 | -0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa0426490 | Msa1350590 | -0.800035 | 1.740912e-48 | -8.615850e-47 |
| Msa0426490 | Msa1352530 | 0.834254 | 3.333733e-56 | -8.615850e-47 |
| Msa0426490 | Msa1356100 | -0.809706 | 1.657166e-50 | -8.615850e-47 |
| Msa0426490 | Msa1361580 | -0.800573 | 1.353027e-48 | -8.615850e-47 |
| Msa0426490 | Msa1363170 | -0.823917 | 1.069715e-53 | -8.615850e-47 |
| Msa0426490 | Msa1371540 | -0.806496 | 7.998238e-50 | -8.615850e-47 |
| Msa0426490 | Msa1373420 | -0.814745 | 1.317329e-51 | -8.615850e-47 |
| Msa0426490 | Msa1386150 | 0.800345 | 1.505742e-48 | -8.615850e-47 |
| Msa0426490 | Msa1393730 | 0.896422 | 3.745036e-76 | -8.615850e-47 |
| Msa0426490 | Msa1395380 | -0.819336 | 1.225305e-52 | -8.615850e-47 |
| Msa0426490 | Msa1398150 | -0.803544 | 3.314572e-49 | -8.615850e-47 |
| Msa0426490 | Msa1408230 | -0.812112 | 4.994972e-51 | -8.615850e-47 |
| Msa0426490 | Msa1411930 | -0.811623 | 6.381863e-51 | -8.615850e-47 |
| Msa0426490 | Msa1423560 | -0.815903 | 7.281650e-52 | -8.615850e-47 |
| Msa0426490 | Msa1439600 | 0.814002 | 1.922889e-51 | -8.615850e-47 |
| Msa0426490 | Msa1444130 | -0.826430 | 2.724018e-54 | -8.615850e-47 |
| Msa0426490 | Msa1444690 | -0.830206 | 3.345612e-55 | -8.615850e-47 |
| Msa0426490 | Msa1453900 | -0.815299 | 9.927070e-52 | -8.615850e-47 |
| Msa0426490 | Msa1454300 | -0.820268 | 7.503423e-53 | -8.615850e-47 |
| Msa0426490 | Msa1462700 | -0.802688 | 4.981152e-49 | -8.615850e-47 |
| Msa0255770 | Msa0426490 | -0.810696 | 1.013890e-50 | -8.615850e-47 |
| Msa0261020 | Msa0426490 | -0.830671 | 2.575985e-55 | -8.615850e-47 |
| Msa0261350 | Msa0426490 | -0.813818 | 2.110998e-51 | -8.615850e-47 |
| Msa0270730 | Msa0426490 | -0.821786 | 3.355719e-53 | -8.615850e-47 |
| Msa0299130 | Msa0426490 | -0.811167 | 8.015742e-51 | -8.615850e-47 |
| Msa0304070 | Msa0426490 | -0.804481 | 2.115880e-49 | -8.615850e-47 |
| Msa0309490 | Msa0426490 | -0.806726 | 7.151907e-50 | -8.615850e-47 |
| Msa0333350 | Msa0426490 | -0.805211 | 1.489262e-49 | -8.615850e-47 |
| Msa0336550 | Msa0426490 | -0.826157 | 3.164867e-54 | -8.615850e-47 |
| Msa0340700 | Msa0426490 | -0.805992 | 1.021197e-49 | -8.615850e-47 |
| Msa0345050 | Msa0426490 | 0.802002 | 6.897468e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426490 | MtrunA17_Chr3g0128501 | 97.831 | 415 | 9 | 0 | 1 | 415 | 1 | 415 | 0.0 | 850 |
| Msa0426490 | MtrunA17_Chr1g0192081 | 58.313 | 403 | 138 | 7 | 16 | 414 | 4 | 380 | 6.92e-159 | 452 |
| Msa0426490 | MtrunA17_Chr1g0195841 | 51.811 | 359 | 171 | 2 | 57 | 414 | 5 | 362 | 7.21e-128 | 373 |
| Msa0426490 | MtrunA17_Chr7g0269031 | 55.155 | 194 | 69 | 5 | 223 | 413 | 141 | 319 | 4.79e-54 | 182 |
| Msa0426490 | MtrunA17_Chr7g0269031 | 35.096 | 208 | 106 | 5 | 60 | 254 | 71 | 262 | 6.44e-29 | 115 |
| Msa0426490 | MtrunA17_Chr4g0073441 | 34.317 | 271 | 165 | 5 | 55 | 314 | 15 | 283 | 1.10e-42 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426490 | AT3G56440.1 | 74.227 | 388 | 89 | 2 | 27 | 414 | 10 | 386 | 0.0 | 597 |
| Msa0426490 | AT2G40810.1 | 71.675 | 406 | 96 | 3 | 10 | 414 | 1 | 388 | 0.0 | 596 |
| Msa0426490 | AT2G40810.2 | 71.675 | 406 | 96 | 3 | 10 | 414 | 1 | 388 | 0.0 | 596 |
| Msa0426490 | AT3G56440.2 | 74.656 | 363 | 81 | 2 | 27 | 389 | 10 | 361 | 0.0 | 561 |
| Msa0426490 | AT3G56440.3 | 75.232 | 323 | 69 | 2 | 27 | 349 | 10 | 321 | 2.61e-177 | 498 |
| Msa0426490 | AT3G62770.1 | 57.323 | 396 | 145 | 5 | 23 | 414 | 45 | 420 | 1.35e-152 | 439 |
| Msa0426490 | AT3G62770.3 | 56.604 | 371 | 137 | 5 | 23 | 389 | 45 | 395 | 9.08e-140 | 405 |
| Msa0426490 | AT5G05150.1 | 47.666 | 407 | 164 | 5 | 10 | 413 | 1 | 361 | 7.03e-125 | 366 |
| Msa0426490 | AT2G40810.3 | 73.529 | 170 | 42 | 1 | 245 | 414 | 97 | 263 | 1.94e-82 | 254 |
| Msa0426490 | AT2G40810.3 | 53.333 | 120 | 40 | 2 | 10 | 128 | 1 | 105 | 9.43e-32 | 122 |
| Msa0426490 | AT4G30510.1 | 32.509 | 283 | 181 | 6 | 53 | 330 | 9 | 286 | 3.90e-38 | 141 |
| Msa0426490 | AT4G30510.2 | 32.766 | 235 | 150 | 5 | 101 | 330 | 1 | 232 | 3.02e-30 | 119 |
Find 136 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCCGATCATTGAATT+TGG | 0.146013 | 3_2:-76888377 | None:intergenic |
| CATTCTGAACTAAAATATTT+TGG | 0.153937 | 3_2:-76890545 | None:intergenic |
| ATCCCAAATCAAAACTTTAT+TGG | 0.177425 | 3_2:-76888675 | None:intergenic |
| TTGGGGTTGGCACCGGTATT+TGG | 0.187638 | 3_2:-76889837 | None:intergenic |
| AACCTTTCAAAGAGACTTTC+AGG | 0.219715 | 3_2:+76888555 | Msa0426490:CDS |
| TGCAGCTTTGATCAAGTAAA+TGG | 0.230085 | 3_2:+76891570 | Msa0426490:CDS |
| AGAGACAGGAATTTGGAATT+TGG | 0.237749 | 3_2:+76886686 | Msa0426490:five_prime_UTR |
| CTGATTTGTTCTCAGTTTCA+TGG | 0.238417 | 3_2:+76888471 | Msa0426490:CDS |
| CAGAGAGAGAGACAGGAATT+TGG | 0.240091 | 3_2:+76886679 | Msa0426490:five_prime_UTR |
| ACTAAATTCATTGTGGCATT+TGG | 0.273806 | 3_2:+76890599 | Msa0426490:CDS |
| AACTTGAGAGTGAGGGTGTT+TGG | 0.279915 | 3_2:+76889726 | Msa0426490:CDS |
| TCTTCATCAAATTGATACTA+TGG | 0.283426 | 3_2:+76888829 | Msa0426490:CDS |
| TCAGAGTGAAGCATGCAATT+TGG | 0.287147 | 3_2:-76888988 | None:intergenic |
| TCCCAAATCAAAACTTTATT+GGG | 0.292270 | 3_2:-76888674 | None:intergenic |
| CATGAAAGATAATGATGAAT+TGG | 0.295519 | 3_2:-76889856 | None:intergenic |
| GATATATGTTTATAACTTCA+TGG | 0.302452 | 3_2:+76888796 | Msa0426490:CDS |
| ACTTGAGAGTGAGGGTGTTT+GGG | 0.303097 | 3_2:+76889727 | Msa0426490:CDS |
| CAGAGTGAAGCATGCAATTT+GGG | 0.308247 | 3_2:-76888987 | None:intergenic |
| GTTCTCAGTTTCATGGAATC+AGG | 0.310536 | 3_2:+76888478 | Msa0426490:CDS |
| CCATTCAAATACATTTGTTA+TGG | 0.324119 | 3_2:+76888883 | Msa0426490:CDS |
| CCTCTGCATATGAATATATA+TGG | 0.330625 | 3_2:+76891937 | Msa0426490:three_prime_UTR |
| AACTTTATTGGGTGGATAGT+TGG | 0.360324 | 3_2:-76888663 | None:intergenic |
| ATGAAAGATAATGATGAATT+GGG | 0.360564 | 3_2:-76889855 | None:intergenic |
| GAAAATTTATTGCTGGAAAG+AGG | 0.362639 | 3_2:+76887034 | Msa0426490:five_prime_UTR |
| GAAGATGAGGCCCCACTATT+GGG | 0.364649 | 3_2:-76888407 | None:intergenic |
| AGAAGATGAGGCCCCACTAT+TGG | 0.366717 | 3_2:-76888408 | None:intergenic |
| GGGCCTCATCTTCTCTTTCC+CGG | 0.370929 | 3_2:+76888417 | Msa0426490:CDS |
| CTGAAGTGAAAATTTATTGC+TGG | 0.391736 | 3_2:+76887027 | Msa0426490:five_prime_UTR |
| TCATTATATGTTGGATTTCG+TGG | 0.394623 | 3_2:-76886635 | None:intergenic |
| AGCATGCAATTTGGGAATCA+TGG | 0.405618 | 3_2:-76888979 | None:intergenic |
| GGTTAGAAGAGGGGTGGATA+GGG | 0.417025 | 3_2:+76889623 | Msa0426490:intron |
| CACTTGATGCTGCCAACCAC+TGG | 0.429688 | 3_2:-76889680 | None:intergenic |
| TTGATACTATGGCAAATCCT+AGG | 0.431047 | 3_2:+76888840 | Msa0426490:CDS |
| GCAGCTTTGATCAAGTAAAT+GGG | 0.450799 | 3_2:+76891571 | Msa0426490:CDS |
| CTGTCATTGATGTCTGCATC+TGG | 0.455833 | 3_2:-76888440 | None:intergenic |
| AAGAGTTTATTGCTTTGTGT+TGG | 0.456916 | 3_2:-76891716 | None:intergenic |
| AGGTTAGAAGAGGGGTGGAT+AGG | 0.457915 | 3_2:+76889622 | Msa0426490:intron |
| AATTGTGAATACCCCAATAG+TGG | 0.458125 | 3_2:+76888395 | Msa0426490:CDS |
| TTCGTCATTTCATTATATGT+TGG | 0.458601 | 3_2:-76886644 | None:intergenic |
| AGAATCTTCAATACAATGGA+TGG | 0.459968 | 3_2:+76889061 | Msa0426490:CDS |
| GACAATCCTCCAACTGAGAT+GGG | 0.468409 | 3_2:-76891763 | None:intergenic |
| AAAATTTATTGCTGGAAAGA+GGG | 0.469548 | 3_2:+76887035 | Msa0426490:five_prime_UTR |
| ACCGGTATTTGGAGAAATCA+AGG | 0.473373 | 3_2:-76889826 | None:intergenic |
| AGCAACATCCTAGCGCTTGT+TGG | 0.476042 | 3_2:+76888626 | Msa0426490:CDS |
| AAAGAAAATCAAAATTGAAA+AGG | 0.477518 | 3_2:+76891825 | Msa0426490:three_prime_UTR |
| CAGGCCCTTGGACAGCAGTT+GGG | 0.479532 | 3_2:-76889767 | None:intergenic |
| CATTGATGTCTGCATCTGGC+CGG | 0.479957 | 3_2:-76888436 | None:intergenic |
| TTCCATCCATGCCAGAGATT+AGG | 0.483661 | 3_2:-76890637 | None:intergenic |
| TGAGAAACAGAGAGAGAGAC+AGG | 0.486533 | 3_2:+76886672 | Msa0426490:five_prime_UTR |
| GCTGCCAACCACTGGACATT+GGG | 0.488358 | 3_2:-76889672 | None:intergenic |
| GAAGTTCGAGTTGAACACTT+TGG | 0.488765 | 3_2:+76888929 | Msa0426490:CDS |
| ACATTTGTTATGGCTTGTCC+AGG | 0.490027 | 3_2:+76888893 | Msa0426490:CDS |
| TGATACTATGGCAAATCCTA+GGG | 0.491747 | 3_2:+76888841 | Msa0426490:CDS |
| CCCTTGATTTCTCCAAATAC+CGG | 0.496555 | 3_2:+76889825 | Msa0426490:CDS |
| GTCTCCCAATGTCCAGTGGT+TGG | 0.498399 | 3_2:+76889668 | Msa0426490:CDS |
| ACATTTAGATCTGAAGTTCG+TGG | 0.499114 | 3_2:+76888728 | Msa0426490:CDS |
| GTCCTAATCTCTGGCATGGA+TGG | 0.500489 | 3_2:+76890635 | Msa0426490:CDS |
| CGACAATCCTCCAACTGAGA+TGG | 0.506058 | 3_2:-76891764 | None:intergenic |
| CCATAACAAATGTATTTGAA+TGG | 0.510743 | 3_2:-76888883 | None:intergenic |
| TTAGCTGCTGGAACAAGTCA+TGG | 0.511790 | 3_2:+76888512 | Msa0426490:CDS |
| GAATTCTGATGAAGTAGTAC+AGG | 0.516241 | 3_2:-76889786 | None:intergenic |
| CGCCTGAAAGTCTCTTTGAA+AGG | 0.516860 | 3_2:-76888557 | None:intergenic |
| CATCTCAGTTGGAGGATTGT+CGG | 0.518831 | 3_2:+76891765 | Msa0426490:three_prime_UTR |
| TATTTCGCTTGTAAATATTG+TGG | 0.519958 | 3_2:+76891801 | Msa0426490:three_prime_UTR |
| CAGAACACTGTCCTAATCTC+TGG | 0.520013 | 3_2:+76890626 | Msa0426490:CDS |
| TGCTTCACTCTGACAACGGA+CGG | 0.522941 | 3_2:+76888998 | Msa0426490:CDS |
| CTATCGTGTAGGTTAGAAGA+GGG | 0.524773 | 3_2:+76889613 | Msa0426490:intron |
| GCATGCAATTTGGGAATCAT+GGG | 0.526357 | 3_2:-76888978 | None:intergenic |
| ACAGGCCCTTGGACAGCAGT+TGG | 0.528221 | 3_2:-76889768 | None:intergenic |
| TCGTCTGTTTCAACATCTCA+AGG | 0.528457 | 3_2:+76888347 | Msa0426490:CDS |
| ATATTTCCAAATTCAATGAT+CGG | 0.530341 | 3_2:+76888371 | Msa0426490:CDS |
| CTTGCAACTGCTAGTGAGAA+GGG | 0.530985 | 3_2:+76889028 | Msa0426490:CDS |
| TGATGAATTGGGGTTGGCAC+CGG | 0.533284 | 3_2:-76889844 | None:intergenic |
| GACTACGGTTGCTTAGCTGC+TGG | 0.535019 | 3_2:+76888500 | Msa0426490:CDS |
| CAAATCAAAACTTTATTGGG+TGG | 0.537171 | 3_2:-76888671 | None:intergenic |
| GAAGAAGAAGAATTAGGGAT+CGG | 0.539177 | 3_2:-76886740 | None:intergenic |
| GATCATCAGAGCAGGTGCAT+TGG | 0.542145 | 3_2:+76888698 | Msa0426490:CDS |
| ATTGATGTCTGCATCTGGCC+GGG | 0.542391 | 3_2:-76888435 | None:intergenic |
| GATTGAACGTGAAACATAAG+AGG | 0.545670 | 3_2:-76892000 | None:intergenic |
| ATACGCCCAACTGCTGTCCA+AGG | 0.547866 | 3_2:+76889762 | Msa0426490:CDS |
| CTCTGTCTCCCAATGTCCAG+TGG | 0.551409 | 3_2:+76889664 | Msa0426490:CDS |
| TAATCTCTGGCATGGATGGA+AGG | 0.552266 | 3_2:+76890639 | Msa0426490:CDS |
| GCTTCACTCTGACAACGGAC+GGG | 0.555040 | 3_2:+76888999 | Msa0426490:CDS |
| ACTTCTCCTTTGTGACGACC+TGG | 0.555547 | 3_2:-76888911 | None:intergenic |
| GATGAAGTAGTACAGGCCCT+TGG | 0.557475 | 3_2:-76889779 | None:intergenic |
| TCTTGCAACTGCTAGTGAGA+AGG | 0.557640 | 3_2:+76889027 | Msa0426490:CDS |
| GAGAGTGAGGGTGTTTGGGG+AGG | 0.558785 | 3_2:+76889731 | Msa0426490:CDS |
| ATTGTGAATACCCCAATAGT+GGG | 0.562593 | 3_2:+76888396 | Msa0426490:CDS |
| CTTGAGAGTGAGGGTGTTTG+GGG | 0.564799 | 3_2:+76889728 | Msa0426490:CDS |
| CGTGTAGGTTAGAAGAGGGG+TGG | 0.568066 | 3_2:+76889617 | Msa0426490:intron |
| GACGAATTGATATGAGATGA+GGG | 0.569550 | 3_2:-76888329 | None:intergenic |
| CACTGTCCTAATCTCTGGCA+TGG | 0.571130 | 3_2:+76890631 | Msa0426490:CDS |
| ACGAATTGATATGAGATGAG+GGG | 0.571530 | 3_2:-76888328 | None:intergenic |
| CTACAGCACCAACAAGCGCT+AGG | 0.572951 | 3_2:-76888634 | None:intergenic |
| TCATCATTATCTTTCATGAG+AGG | 0.573870 | 3_2:+76889861 | Msa0426490:CDS |
| GGAGAAGAGTTTCCAGCTCG+TGG | 0.577119 | 3_2:-76891674 | None:intergenic |
| ACTACAAGTCCTCCACGAGC+TGG | 0.580452 | 3_2:+76891662 | Msa0426490:three_prime_UTR |
| TATAACTTGCATTATCATGT+GGG | 0.580612 | 3_2:+76891895 | Msa0426490:three_prime_UTR |
| TGCATGCTTCACTCTGACAA+CGG | 0.580675 | 3_2:+76888994 | Msa0426490:CDS |
| TGCTGCCAACCACTGGACAT+TGG | 0.582381 | 3_2:-76889673 | None:intergenic |
| GGGAATCATGTTTACATACA+AGG | 0.584659 | 3_2:-76891741 | None:intergenic |
| TTTGGGATGATCATCAGAGC+AGG | 0.585812 | 3_2:+76888690 | Msa0426490:CDS |
| CTTTGACTGATTGATTTCCA+CGG | 0.585960 | 3_2:+76887085 | Msa0426490:five_prime_UTR |
| GAATCTTCAATACAATGGAT+GGG | 0.589619 | 3_2:+76889062 | Msa0426490:CDS |
| ATATATTCAACTTGAGAGTG+AGG | 0.590254 | 3_2:+76889718 | Msa0426490:CDS |
| AGATAATGATGAATTGGGGT+TGG | 0.592572 | 3_2:-76889850 | None:intergenic |
| GTATAACTTGCATTATCATG+TGG | 0.594031 | 3_2:+76891894 | Msa0426490:three_prime_UTR |
| AAGATGAGGCCCCACTATTG+GGG | 0.595901 | 3_2:-76888406 | None:intergenic |
| TCTCACTAGCAGTTGCAAGA+AGG | 0.597081 | 3_2:-76889024 | None:intergenic |
| CGAATTGATATGAGATGAGG+GGG | 0.598276 | 3_2:-76888327 | None:intergenic |
| GATTAGAATCTTCAATACAA+TGG | 0.601484 | 3_2:+76889057 | Msa0426490:CDS |
| AGACGAATTGATATGAGATG+AGG | 0.607029 | 3_2:-76888330 | None:intergenic |
| TATATTCAACTTGAGAGTGA+GGG | 0.607920 | 3_2:+76889719 | Msa0426490:CDS |
| GATCGGAATGCAAAACGTGA+AGG | 0.611307 | 3_2:-76886723 | None:intergenic |
| TCTATCGTGTAGGTTAGAAG+AGG | 0.613791 | 3_2:+76889612 | Msa0426490:intron |
| CAGCTTTGATCAAGTAAATG+GGG | 0.615526 | 3_2:+76891572 | Msa0426490:CDS |
| ACAATCCTCCAACTGAGATG+GGG | 0.616647 | 3_2:-76891762 | None:intergenic |
| TACGCCCAACTGCTGTCCAA+GGG | 0.621281 | 3_2:+76889763 | Msa0426490:CDS |
| GTTTCATGGAATCAGGACTA+CGG | 0.621760 | 3_2:+76888485 | Msa0426490:CDS |
| TGGCCGGGAAAGAGAAGATG+AGG | 0.624207 | 3_2:-76888420 | None:intergenic |
| TGAAAACACTAAATTCATTG+TGG | 0.629098 | 3_2:+76890592 | Msa0426490:CDS |
| CAATCCTCCAACTGAGATGG+GGG | 0.632346 | 3_2:-76891761 | None:intergenic |
| GCTTGTCCAGGTCGTCACAA+AGG | 0.632605 | 3_2:+76888905 | Msa0426490:CDS |
| CCGGTATTTGGAGAAATCAA+GGG | 0.637476 | 3_2:-76889825 | None:intergenic |
| GGAGACATCATATTTACATG+TGG | 0.642439 | 3_2:-76891695 | None:intergenic |
| CAAGCGCTAGGATGTTGCTA+CGG | 0.644150 | 3_2:-76888622 | None:intergenic |
| TTATTGAGTGCAGAAAATGC+TGG | 0.654198 | 3_2:+76888298 | Msa0426490:intron |
| CCATATATATTCATATGCAG+AGG | 0.659672 | 3_2:-76891937 | None:intergenic |
| TTGGCAGCATCAAGTGACAA+AGG | 0.665997 | 3_2:+76889687 | Msa0426490:CDS |
| GATACTATGGCAAATCCTAG+GGG | 0.691243 | 3_2:+76888842 | Msa0426490:CDS |
| TGAAAGATAATGATGAATTG+GGG | 0.693897 | 3_2:-76889854 | None:intergenic |
| AGCTTTGATCAAGTAAATGG+GGG | 0.695560 | 3_2:+76891573 | Msa0426490:CDS |
| TATCGTGTAGGTTAGAAGAG+GGG | 0.696069 | 3_2:+76889614 | Msa0426490:intron |
| TTGTGAATACCCCAATAGTG+GGG | 0.696105 | 3_2:+76888397 | Msa0426490:CDS |
| GAAGAGTTTCCAGCTCGTGG+AGG | 0.699537 | 3_2:-76891671 | None:intergenic |
| ATACTATGGCAAATCCTAGG+GGG | 0.718473 | 3_2:+76888843 | Msa0426490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTAAATAAATTTTAC+TGG | - | chr3_2:76887327-76887346 | None:intergenic | 10.0% |
| !! | ATTTATTTAAAAACACGAAT+TGG | + | chr3_2:76887332-76887351 | Msa0426490:intron | 15.0% |
| !! | TTTATTTAAAAACACGAATT+GGG | + | chr3_2:76887333-76887352 | Msa0426490:intron | 15.0% |
| !! | CATATATATGAAGTAAATAA+TGG | - | chr3_2:76887742-76887761 | None:intergenic | 15.0% |
| !!! | TATTTTCATATCTATATATG+AGG | + | chr3_2:76889188-76889207 | Msa0426490:intron | 15.0% |
| !! | CAAATTATGATAATAATTTC+AGG | - | chr3_2:76889918-76889937 | None:intergenic | 15.0% |
| !! | CTGAAATTATTATCATAATT+TGG | + | chr3_2:76889916-76889935 | Msa0426490:intron | 15.0% |
| !!! | ATTTAATTTTTGAAAGAACA+GGG | - | chr3_2:76890711-76890730 | None:intergenic | 15.0% |
| !! | ATTAAATTCTATTAATGTAC+AGG | - | chr3_2:76890908-76890927 | None:intergenic | 15.0% |
| !! | GACAAATATTAATAAGTTAA+TGG | + | chr3_2:76890943-76890962 | Msa0426490:intron | 15.0% |
| !! | GACAAATATTAATAAGTTAA+TGG | + | chr3_2:76890943-76890962 | Msa0426490:intron | 15.0% |
| !!! | ATCTGAAATATATTATTTTG+AGG | - | chr3_2:76891407-76891426 | None:intergenic | 15.0% |
| !! | AAAGAAAATCAAAATTGAAA+AGG | + | chr3_2:76891825-76891844 | Msa0426490:three_prime_UTR | 15.0% |
| !! | ATAAAAAACAAAATTGCGAT+GGG | - | chr3_2:76886891-76886910 | None:intergenic | 20.0% |
| !! | TATAAAAAACAAAATTGCGA+TGG | - | chr3_2:76886892-76886911 | None:intergenic | 20.0% |
| !! | AATGTAAAAAAATGTGATTG+AGG | - | chr3_2:76887121-76887140 | None:intergenic | 20.0% |
| !!! | AAATAAATTTTACTGGCTTA+CGG | - | chr3_2:76887320-76887339 | None:intergenic | 20.0% |
| !! | TTTACAAACTCAAATTATAC+AGG | - | chr3_2:76887830-76887849 | None:intergenic | 20.0% |
| !! | ATACACACACATATTTATAA+TGG | + | chr3_2:76887926-76887945 | Msa0426490:intron | 20.0% |
| !! | CAATTCAAATTTCATAAGTT+TGG | - | chr3_2:76888012-76888031 | None:intergenic | 20.0% |
| !! | ATATTTCCAAATTCAATGAT+CGG | + | chr3_2:76888371-76888390 | Msa0426490:CDS | 20.0% |
| !! | GATATATGTTTATAACTTCA+TGG | + | chr3_2:76888796-76888815 | Msa0426490:CDS | 20.0% |
| !! | GATATGAAAATAAAAAACCT+GGG | - | chr3_2:76889180-76889199 | None:intergenic | 20.0% |
| !! | AGATATGAAAATAAAAAACC+TGG | - | chr3_2:76889181-76889200 | None:intergenic | 20.0% |
| !!! | TTGTGAATTTTTTTATTGTG+TGG | + | chr3_2:76889339-76889358 | Msa0426490:intron | 20.0% |
| !! | ATGAAAGATAATGATGAATT+GGG | - | chr3_2:76889858-76889877 | None:intergenic | 20.0% |
| !! | ATGAAAAAAGATCAAAAGTA+GGG | + | chr3_2:76890145-76890164 | Msa0426490:intron | 20.0% |
| !!! | TGTTTGTTTTATCATTCTTT+TGG | + | chr3_2:76890307-76890326 | Msa0426490:intron | 20.0% |
| !!! | CATTCTGAACTAAAATATTT+TGG | - | chr3_2:76890548-76890567 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGTTCAGAA+TGG | + | chr3_2:76890546-76890565 | Msa0426490:CDS | 20.0% |
| !!! | TTTAATTTTTGAAAGAACAG+GGG | - | chr3_2:76890710-76890729 | None:intergenic | 20.0% |
| !!! | GATTTAATTTTTGAAAGAAC+AGG | - | chr3_2:76890712-76890731 | None:intergenic | 20.0% |
| !! | CTTTCAAAAATTAAATCCTT+AGG | + | chr3_2:76890715-76890734 | Msa0426490:intron | 20.0% |
| !!! | TAGAATACAATTTTACAATC+TGG | + | chr3_2:76890850-76890869 | Msa0426490:intron | 20.0% |
| !! | AAAAATATCACATGATTCAA+TGG | - | chr3_2:76890876-76890895 | None:intergenic | 20.0% |
| !!! | ATTGTTTGAAAGTATATTGT+TGG | + | chr3_2:76891141-76891160 | Msa0426490:intron | 20.0% |
| !! | AGTCTTGACATTTATAATTA+TGG | + | chr3_2:76891181-76891200 | Msa0426490:intron | 20.0% |
| !!! | AAGTTTTAATAGTTATTCAG+CGG | + | chr3_2:76891217-76891236 | Msa0426490:intron | 20.0% |
| !!! | TGTTTCTTTTTTTCTTACAA+AGG | - | chr3_2:76891451-76891470 | None:intergenic | 20.0% |
| !!! | TGTGCTTAATTTAACATTTT+AGG | - | chr3_2:76891629-76891648 | None:intergenic | 20.0% |
| !! | TGAATATATATGGCAATATA+TGG | + | chr3_2:76891947-76891966 | Msa0426490:intron | 20.0% |
| !! | GAATATATATGGCAATATAT+GGG | + | chr3_2:76891948-76891967 | Msa0426490:intron | 20.0% |
| !!! | GTCTTCTGTTTAATTTTTGT+CGG | - | chr3_2:76886616-76886635 | None:intergenic | 25.0% |
| ! | TTCGTCATTTCATTATATGT+TGG | - | chr3_2:76886647-76886666 | None:intergenic | 25.0% |
| ! | AAGAAGAAGAAGAAGAATTA+GGG | - | chr3_2:76886748-76886767 | None:intergenic | 25.0% |
| ! | AATCTTTAACAAAGAAAACG+AGG | - | chr3_2:76886944-76886963 | None:intergenic | 25.0% |
| ! | CAACATAGAAAAAAGCAAAA+AGG | - | chr3_2:76886975-76886994 | None:intergenic | 25.0% |
| ! | AAAATTTATTGCTGGAAAGA+GGG | + | chr3_2:76887035-76887054 | Msa0426490:five_prime_UTR | 25.0% |
| ! | TGTGTGATACTTGTATAAAT+GGG | + | chr3_2:76887178-76887197 | Msa0426490:intron | 25.0% |
| ! | ATACTTGTATAAATGGGAAT+TGG | + | chr3_2:76887184-76887203 | Msa0426490:intron | 25.0% |
| !! | ATTATTTCCAACGATTTTTG+TGG | - | chr3_2:76887371-76887390 | None:intergenic | 25.0% |
| ! | TTGAAAAAGTGGAGTAAAAT+TGG | + | chr3_2:76887502-76887521 | Msa0426490:intron | 25.0% |
| ! | TTAAGTAATGTTCAATAGCT+AGG | + | chr3_2:76887542-76887561 | Msa0426490:intron | 25.0% |
| ! | TAAGTAATGTTCAATAGCTA+GGG | + | chr3_2:76887543-76887562 | Msa0426490:intron | 25.0% |
| ! | AACAGAAAATGCATAGAATT+AGG | + | chr3_2:76887599-76887618 | Msa0426490:intron | 25.0% |
| ! | TACAGGATACATAAATTCAT+GGG | + | chr3_2:76887634-76887653 | Msa0426490:intron | 25.0% |
| !!! | ACCCAATAAAGTTTTGATTT+GGG | + | chr3_2:76888673-76888692 | Msa0426490:CDS | 25.0% |
| ! | TCCCAAATCAAAACTTTATT+GGG | - | chr3_2:76888677-76888696 | None:intergenic | 25.0% |
| ! | ATCCCAAATCAAAACTTTAT+TGG | - | chr3_2:76888678-76888697 | None:intergenic | 25.0% |
| ! | TCTTCATCAAATTGATACTA+TGG | + | chr3_2:76888829-76888848 | Msa0426490:CDS | 25.0% |
| ! | CCATAACAAATGTATTTGAA+TGG | - | chr3_2:76888886-76888905 | None:intergenic | 25.0% |
| !! | CCATTCAAATACATTTGTTA+TGG | + | chr3_2:76888883-76888902 | Msa0426490:CDS | 25.0% |
| ! | GATTAGAATCTTCAATACAA+TGG | + | chr3_2:76889057-76889076 | Msa0426490:CDS | 25.0% |
| ! | TGGAAAGTTCAACATATTAA+TGG | - | chr3_2:76889140-76889159 | None:intergenic | 25.0% |
| ! | AAAATAAAAAACCTGGGAAA+TGG | - | chr3_2:76889174-76889193 | None:intergenic | 25.0% |
| ! | TTTCATATCTATATATGAGG+TGG | + | chr3_2:76889191-76889210 | Msa0426490:intron | 25.0% |
| !! | TGAAAATGTTTTACTTGACT+TGG | - | chr3_2:76889316-76889335 | None:intergenic | 25.0% |
| ! | TTTAAGAATGATCAAGAATC+AGG | - | chr3_2:76889371-76889390 | None:intergenic | 25.0% |
| !! | ACAATTTTCTTTGCATCTTT+TGG | + | chr3_2:76889406-76889425 | Msa0426490:intron | 25.0% |
| !! | GCTAAAACATTGTTATTGTA+AGG | - | chr3_2:76889438-76889457 | None:intergenic | 25.0% |
| ! | TGAAAGATAATGATGAATTG+GGG | - | chr3_2:76889857-76889876 | None:intergenic | 25.0% |
| ! | CATGAAAGATAATGATGAAT+TGG | - | chr3_2:76889859-76889878 | None:intergenic | 25.0% |
| ! | AAGTATTTGAATTGGTAAAC+TGG | - | chr3_2:76889964-76889983 | None:intergenic | 25.0% |
| !!! | GCTGTTTTTAGATAGTTTTT+AGG | + | chr3_2:76890014-76890033 | Msa0426490:intron | 25.0% |
| !!! | TTTTTAGGTCTTCATCATTT+AGG | + | chr3_2:76890029-76890048 | Msa0426490:intron | 25.0% |
| ! | CATGAAAAAAGATCAAAAGT+AGG | + | chr3_2:76890144-76890163 | Msa0426490:intron | 25.0% |
| !! | TGCTCTATTAGATTTACTTT+TGG | + | chr3_2:76890206-76890225 | Msa0426490:intron | 25.0% |
| !! | AATCAATGATTTTGCACATT+AGG | + | chr3_2:76890282-76890301 | Msa0426490:intron | 25.0% |
| ! | TAGTAGAACCCATATATTTA+TGG | + | chr3_2:76890399-76890418 | Msa0426490:intron | 25.0% |
| ! | GAGAACATCCATAAATATAT+GGG | - | chr3_2:76890410-76890429 | None:intergenic | 25.0% |
| ! | AGAGAACATCCATAAATATA+TGG | - | chr3_2:76890411-76890430 | None:intergenic | 25.0% |
| !!! | TTGTTAGCTTACTTTTAAGA+TGG | + | chr3_2:76890445-76890464 | Msa0426490:intron | 25.0% |
| !! | GGAAAATTGCATGATATTTT+TGG | + | chr3_2:76890466-76890485 | Msa0426490:intron | 25.0% |
| !! | ACAATGAATTTAGTGTTTTC+AGG | - | chr3_2:76890593-76890612 | None:intergenic | 25.0% |
| ! | TGAAAACACTAAATTCATTG+TGG | + | chr3_2:76890592-76890611 | Msa0426490:CDS | 25.0% |
| !!! | TTAATTTTTGAAAGAACAGG+GGG | - | chr3_2:76890709-76890728 | None:intergenic | 25.0% |
| ! | TTTGAAAATGTCAAAACCTA+AGG | - | chr3_2:76890734-76890753 | None:intergenic | 25.0% |
| !! | GACATTTTCAAATAATGTTG+AGG | + | chr3_2:76890742-76890761 | Msa0426490:intron | 25.0% |
| ! | CTATTGAAATTAGTGGTTTA+TGG | + | chr3_2:76890790-76890809 | Msa0426490:intron | 25.0% |
| ! | TAGATTCAAATGTCTCAATT+AGG | - | chr3_2:76891098-76891117 | None:intergenic | 25.0% |
| !! | TTTGAAAGTATATTGTTGGA+TGG | + | chr3_2:76891145-76891164 | Msa0426490:intron | 25.0% |
| ! | TGAAAACAAATTACACATGT+GGG | - | chr3_2:76891264-76891283 | None:intergenic | 25.0% |
| ! | TTGAAAACAAATTACACATG+TGG | - | chr3_2:76891265-76891284 | None:intergenic | 25.0% |
| ! | CAAAAAACAAGTTGTATGTA+AGG | - | chr3_2:76891534-76891553 | None:intergenic | 25.0% |
| ! | TATTTCGCTTGTAAATATTG+TGG | + | chr3_2:76891801-76891820 | Msa0426490:three_prime_UTR | 25.0% |
| !! | TATAACTTGCATTATCATGT+GGG | + | chr3_2:76891895-76891914 | Msa0426490:three_prime_UTR | 25.0% |
| ! | AGGATACAATCATGTTATAT+TGG | - | chr3_2:76891983-76892002 | None:intergenic | 25.0% |
| !! | TTCTGTTTAATTTTTGTCGG+AGG | - | chr3_2:76886613-76886632 | None:intergenic | 30.0% |
| TCATTATATGTTGGATTTCG+TGG | - | chr3_2:76886638-76886657 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGAAGAATT+AGG | - | chr3_2:76886749-76886768 | None:intergenic | 30.0% | |
| TATGTTGAAATTTCTGATCG+TGG | + | chr3_2:76886988-76887007 | Msa0426490:intron | 30.0% | |
| ATGTTGAAATTTCTGATCGT+GGG | + | chr3_2:76886989-76887008 | Msa0426490:intron | 30.0% | |
| CTGAAGTGAAAATTTATTGC+TGG | + | chr3_2:76887027-76887046 | Msa0426490:five_prime_UTR | 30.0% | |
| GAAAATTTATTGCTGGAAAG+AGG | + | chr3_2:76887034-76887053 | Msa0426490:five_prime_UTR | 30.0% | |
| ACTTACATAATGACATTGAC+AGG | - | chr3_2:76887154-76887173 | None:intergenic | 30.0% | |
| CTGTGTGATACTTGTATAAA+TGG | + | chr3_2:76887177-76887196 | Msa0426490:intron | 30.0% | |
| GGAAACAATGTTATCAATCA+TGG | + | chr3_2:76887205-76887224 | Msa0426490:intron | 30.0% | |
| TCTGTACTAATGCACAATAA+CGG | + | chr3_2:76887257-76887276 | Msa0426490:intron | 30.0% | |
| ! | CTCAAAGTATTAAGTGATGT+AGG | - | chr3_2:76887461-76887480 | None:intergenic | 30.0% |
| CTACATCACTTAATACTTTG+AGG | + | chr3_2:76887459-76887478 | Msa0426490:intron | 30.0% | |
| !!! | TCCACTTTTTCAAGCAATTA+TGG | - | chr3_2:76887495-76887514 | None:intergenic | 30.0% |
| TGGAGTAAAATTGGAATTGT+TGG | + | chr3_2:76887511-76887530 | Msa0426490:intron | 30.0% | |
| AAGTAATGTTCAATAGCTAG+GGG | + | chr3_2:76887544-76887563 | Msa0426490:intron | 30.0% | |
| AGAAAATGCATAGAATTAGG+AGG | + | chr3_2:76887602-76887621 | Msa0426490:intron | 30.0% | |
| CTACAGGATACATAAATTCA+TGG | + | chr3_2:76887633-76887652 | Msa0426490:intron | 30.0% | |
| CACAGTTAAATTCATTGGTA+GGG | - | chr3_2:76887675-76887694 | None:intergenic | 30.0% | |
| !!! | TTTTAATTTTCATTGCCTCG+TGG | + | chr3_2:76887706-76887725 | Msa0426490:intron | 30.0% |
| TTGAATTGCTAAACATCTTG+TGG | + | chr3_2:76888024-76888043 | Msa0426490:intron | 30.0% | |
| CTAACTCAAACAAGTGAAAA+GGG | - | chr3_2:76888069-76888088 | None:intergenic | 30.0% | |
| ACTAACTCAAACAAGTGAAA+AGG | - | chr3_2:76888070-76888089 | None:intergenic | 30.0% | |
| CAATTTCCGATCATTGAATT+TGG | - | chr3_2:76888380-76888399 | None:intergenic | 30.0% | |
| CAAATCAAAACTTTATTGGG+TGG | - | chr3_2:76888674-76888693 | None:intergenic | 30.0% | |
| !!! | CACCCAATAAAGTTTTGATT+TGG | + | chr3_2:76888672-76888691 | Msa0426490:CDS | 30.0% |
| AGAATCTTCAATACAATGGA+TGG | + | chr3_2:76889061-76889080 | Msa0426490:CDS | 30.0% | |
| GAATCTTCAATACAATGGAT+GGG | + | chr3_2:76889062-76889081 | Msa0426490:CDS | 30.0% | |
| GGGAAATGGAAAATATGAAA+TGG | - | chr3_2:76889160-76889179 | None:intergenic | 30.0% | |
| ! | TTTCATATTTTCCATTTCCC+AGG | + | chr3_2:76889160-76889179 | Msa0426490:intron | 30.0% |
| ! | ATTTTCTTTGCATCTTTTGG+AGG | + | chr3_2:76889409-76889428 | Msa0426490:intron | 30.0% |
| AAGATCAAACTGAATCCTAT+TGG | - | chr3_2:76889554-76889573 | None:intergenic | 30.0% | |
| GATTATTGAACACGAAAAGA+GGG | - | chr3_2:76889586-76889605 | None:intergenic | 30.0% | |
| !! | AATCGATTTTTCTATCGTGT+AGG | + | chr3_2:76889602-76889621 | Msa0426490:intron | 30.0% |
| ATATATTCAACTTGAGAGTG+AGG | + | chr3_2:76889718-76889737 | Msa0426490:CDS | 30.0% | |
| TATATTCAACTTGAGAGTGA+GGG | + | chr3_2:76889719-76889738 | Msa0426490:CDS | 30.0% | |
| TCATCATTATCTTTCATGAG+AGG | + | chr3_2:76889861-76889880 | Msa0426490:CDS | 30.0% | |
| TCATCATTTAGGAAACTTGA+TGG | + | chr3_2:76890040-76890059 | Msa0426490:intron | 30.0% | |
| TTCATAAAAACAGGAGACTT+CGG | - | chr3_2:76890098-76890117 | None:intergenic | 30.0% | |
| !! | ATTTACTTTTGGATTTGTGC+AGG | + | chr3_2:76890217-76890236 | Msa0426490:intron | 30.0% |
| !! | TTTACTTTTGGATTTGTGCA+GGG | + | chr3_2:76890218-76890237 | Msa0426490:intron | 30.0% |
| ! | TTCATGTAAGATGATTTGTG+CGG | - | chr3_2:76890263-76890282 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTATGAGTTATCC+AGG | + | chr3_2:76890324-76890343 | Msa0426490:intron | 30.0% |
| GATGTTATTACATGCTTGAA+AGG | - | chr3_2:76890376-76890395 | None:intergenic | 30.0% | |
| ATTGTTTCCAGAGAGAAAAT+AGG | - | chr3_2:76890513-76890532 | None:intergenic | 30.0% | |
| ACTAAATTCATTGTGGCATT+TGG | + | chr3_2:76890599-76890618 | Msa0426490:CDS | 30.0% | |
| TTGCATGCTATTGAAATTAG+TGG | + | chr3_2:76890783-76890802 | Msa0426490:intron | 30.0% | |
| CTCTCTTCATTTAATGAACT+TGG | + | chr3_2:76891489-76891508 | Msa0426490:intron | 30.0% | |
| AAGAGTTTATTGCTTTGTGT+TGG | - | chr3_2:76891719-76891738 | None:intergenic | 30.0% | |
| ! | GTATAACTTGCATTATCATG+TGG | + | chr3_2:76891894-76891913 | Msa0426490:three_prime_UTR | 30.0% |
| CCATATATATTCATATGCAG+AGG | - | chr3_2:76891940-76891959 | None:intergenic | 30.0% | |
| CCTCTGCATATGAATATATA+TGG | + | chr3_2:76891937-76891956 | Msa0426490:three_prime_UTR | 30.0% | |
| ! | AGAGACAGGAATTTGGAATT+TGG | + | chr3_2:76886686-76886705 | Msa0426490:five_prime_UTR | 35.0% |
| GAAGAAGAAGAATTAGGGAT+CGG | - | chr3_2:76886743-76886762 | None:intergenic | 35.0% | |
| ! | CTTTGACTGATTGATTTCCA+CGG | + | chr3_2:76887085-76887104 | Msa0426490:five_prime_UTR | 35.0% |
| AAAATGTGATTGAGGCAAGA+GGG | - | chr3_2:76887113-76887132 | None:intergenic | 35.0% | |
| AAAAATGTGATTGAGGCAAG+AGG | - | chr3_2:76887114-76887133 | None:intergenic | 35.0% | |
| CCTATAGTGTTATAGCTTAG+CGG | - | chr3_2:76887295-76887314 | None:intergenic | 35.0% | |
| GCCATAATTGCTTGAAAAAG+TGG | + | chr3_2:76887491-76887510 | Msa0426490:intron | 35.0% | |
| ! | AATTGGAATTGTTGGCTGTT+AGG | + | chr3_2:76887519-76887538 | Msa0426490:intron | 35.0% |
| GCACAGTTAAATTCATTGGT+AGG | - | chr3_2:76887676-76887695 | None:intergenic | 35.0% | |
| TGCAGCACAGTTAAATTCAT+TGG | - | chr3_2:76887680-76887699 | None:intergenic | 35.0% | |
| TGTTATCTAGAGAATGAGAC+AGG | + | chr3_2:76887763-76887782 | Msa0426490:intron | 35.0% | |
| TCTTCAACACATGAAATGAC+TGG | + | chr3_2:76888108-76888127 | Msa0426490:intron | 35.0% | |
| ! | GCATTTTCTGCACTCAATAA+CGG | - | chr3_2:76888298-76888317 | None:intergenic | 35.0% |
| TTATTGAGTGCAGAAAATGC+TGG | + | chr3_2:76888298-76888317 | Msa0426490:intron | 35.0% | |
| ACGAATTGATATGAGATGAG+GGG | - | chr3_2:76888331-76888350 | None:intergenic | 35.0% | |
| GACGAATTGATATGAGATGA+GGG | - | chr3_2:76888332-76888351 | None:intergenic | 35.0% | |
| AGACGAATTGATATGAGATG+AGG | - | chr3_2:76888333-76888352 | None:intergenic | 35.0% | |
| AATTGTGAATACCCCAATAG+TGG | + | chr3_2:76888395-76888414 | Msa0426490:CDS | 35.0% | |
| ATTGTGAATACCCCAATAGT+GGG | + | chr3_2:76888396-76888415 | Msa0426490:CDS | 35.0% | |
| !! | CTGATTTGTTCTCAGTTTCA+TGG | + | chr3_2:76888471-76888490 | Msa0426490:CDS | 35.0% |
| AACCTTTCAAAGAGACTTTC+AGG | + | chr3_2:76888555-76888574 | Msa0426490:CDS | 35.0% | |
| TTCAGGCGTGATTTAAAAAG+TGG | + | chr3_2:76888572-76888591 | Msa0426490:CDS | 35.0% | |
| AACTTTATTGGGTGGATAGT+TGG | - | chr3_2:76888666-76888685 | None:intergenic | 35.0% | |
| ! | ACATTTAGATCTGAAGTTCG+TGG | + | chr3_2:76888728-76888747 | Msa0426490:CDS | 35.0% |
| TTGATACTATGGCAAATCCT+AGG | + | chr3_2:76888840-76888859 | Msa0426490:CDS | 35.0% | |
| TGATACTATGGCAAATCCTA+GGG | + | chr3_2:76888841-76888860 | Msa0426490:CDS | 35.0% | |
| ! | TTTTACGCCTCAACATTCTT+GGG | + | chr3_2:76889494-76889513 | Msa0426490:intron | 35.0% |
| AAGTGGAACTTCTTTCCAAT+AGG | + | chr3_2:76889536-76889555 | Msa0426490:intron | 35.0% | |
| CGATTATTGAACACGAAAAG+AGG | - | chr3_2:76889587-76889606 | None:intergenic | 35.0% | |
| GAATTCTGATGAAGTAGTAC+AGG | - | chr3_2:76889789-76889808 | None:intergenic | 35.0% | |
| AGATAATGATGAATTGGGGT+TGG | - | chr3_2:76889853-76889872 | None:intergenic | 35.0% | |
| GGTAAACTGGAAAAGATGAT+TGG | - | chr3_2:76889951-76889970 | None:intergenic | 35.0% | |
| AGCTGGCTAAGTATTTGAAT+TGG | - | chr3_2:76889972-76889991 | None:intergenic | 35.0% | |
| ! | TCATGTAAGATGATTTGTGC+GGG | - | chr3_2:76890262-76890281 | None:intergenic | 35.0% |
| ATCAAAGATGTAATGCTACC+TGG | - | chr3_2:76890345-76890364 | None:intergenic | 35.0% | |
| ! | GTTCTTACCTATTTTCTCTC+TGG | + | chr3_2:76890503-76890522 | Msa0426490:intron | 35.0% |
| !! | ATTTAGTGTTTTCAGGCAAG+TGG | - | chr3_2:76890586-76890605 | None:intergenic | 35.0% |
| TTAAGCTGTATGTCTACAGT+TGG | - | chr3_2:76891041-76891060 | None:intergenic | 35.0% | |
| ACAAGTTGTATGTAAGGATG+AGG | - | chr3_2:76891528-76891547 | None:intergenic | 35.0% | |
| ! | TGCAGCTTTGATCAAGTAAA+TGG | + | chr3_2:76891570-76891589 | Msa0426490:CDS | 35.0% |
| ! | GCAGCTTTGATCAAGTAAAT+GGG | + | chr3_2:76891571-76891590 | Msa0426490:CDS | 35.0% |
| ! | CAGCTTTGATCAAGTAAATG+GGG | + | chr3_2:76891572-76891591 | Msa0426490:CDS | 35.0% |
| ! | AGCTTTGATCAAGTAAATGG+GGG | + | chr3_2:76891573-76891592 | Msa0426490:CDS | 35.0% |
| GGAGACATCATATTTACATG+TGG | - | chr3_2:76891698-76891717 | None:intergenic | 35.0% | |
| GGGAATCATGTTTACATACA+AGG | - | chr3_2:76891744-76891763 | None:intergenic | 35.0% | |
| GATTGAACGTGAAACATAAG+AGG | - | chr3_2:76892003-76892022 | None:intergenic | 35.0% | |
| TTCTTCTTCTTCTTCATCCC+TGG | + | chr3_2:76886754-76886773 | Msa0426490:five_prime_UTR | 40.0% | |
| AGAAAACGAGGAAATGAAGC+AGG | - | chr3_2:76886932-76886951 | None:intergenic | 40.0% | |
| CCGCTAAGCTATAACACTAT+AGG | + | chr3_2:76887292-76887311 | Msa0426490:intron | 40.0% | |
| ! | GCATTGACCACAAAAATCGT+TGG | + | chr3_2:76887361-76887380 | Msa0426490:intron | 40.0% |
| ! | TAATTTTCATTGCCTCGTGG+AGG | + | chr3_2:76887709-76887728 | Msa0426490:intron | 40.0% |
| TCTAGAGAATGAGACAGGAA+AGG | + | chr3_2:76887768-76887787 | Msa0426490:intron | 40.0% | |
| GAAAAGGGATTCAACAGGAA+TGG | - | chr3_2:76888054-76888073 | None:intergenic | 40.0% | |
| CAAGTGAAAAGGGATTCAAC+AGG | - | chr3_2:76888059-76888078 | None:intergenic | 40.0% | |
| AATGTTCCATTAACAGTGCC+TGG | + | chr3_2:76888140-76888159 | Msa0426490:intron | 40.0% | |
| ! | AATAACGGTGAAGTGTCAGA+AGG | - | chr3_2:76888283-76888302 | None:intergenic | 40.0% |
| CGAATTGATATGAGATGAGG+GGG | - | chr3_2:76888330-76888349 | None:intergenic | 40.0% | |
| TCGTCTGTTTCAACATCTCA+AGG | + | chr3_2:76888347-76888366 | Msa0426490:CDS | 40.0% | |
| TTGTGAATACCCCAATAGTG+GGG | + | chr3_2:76888397-76888416 | Msa0426490:CDS | 40.0% | |
| GTTCTCAGTTTCATGGAATC+AGG | + | chr3_2:76888478-76888497 | Msa0426490:CDS | 40.0% | |
| GTTTCATGGAATCAGGACTA+CGG | + | chr3_2:76888485-76888504 | Msa0426490:CDS | 40.0% | |
| AGGCGTGATTTAAAAAGTGG+CGG | + | chr3_2:76888575-76888594 | Msa0426490:CDS | 40.0% | |
| GATACTATGGCAAATCCTAG+GGG | + | chr3_2:76888842-76888861 | Msa0426490:CDS | 40.0% | |
| ATACTATGGCAAATCCTAGG+GGG | + | chr3_2:76888843-76888862 | Msa0426490:CDS | 40.0% | |
| !! | ACATTTGTTATGGCTTGTCC+AGG | + | chr3_2:76888893-76888912 | Msa0426490:CDS | 40.0% |
| !! | GAAGTTCGAGTTGAACACTT+TGG | + | chr3_2:76888929-76888948 | Msa0426490:CDS | 40.0% |
| GCATGCAATTTGGGAATCAT+GGG | - | chr3_2:76888981-76889000 | None:intergenic | 40.0% | |
| AGCATGCAATTTGGGAATCA+TGG | - | chr3_2:76888982-76889001 | None:intergenic | 40.0% | |
| CAGAGTGAAGCATGCAATTT+GGG | - | chr3_2:76888990-76889009 | None:intergenic | 40.0% | |
| TCAGAGTGAAGCATGCAATT+TGG | - | chr3_2:76888991-76889010 | None:intergenic | 40.0% | |
| ! | CTTTTACGCCTCAACATTCT+TGG | + | chr3_2:76889493-76889512 | Msa0426490:intron | 40.0% |
| TTCCACTTCCAAAACTATCG+TGG | - | chr3_2:76889524-76889543 | None:intergenic | 40.0% | |
| TCTATCGTGTAGGTTAGAAG+AGG | + | chr3_2:76889612-76889631 | Msa0426490:intron | 40.0% | |
| CTATCGTGTAGGTTAGAAGA+GGG | + | chr3_2:76889613-76889632 | Msa0426490:intron | 40.0% | |
| TATCGTGTAGGTTAGAAGAG+GGG | + | chr3_2:76889614-76889633 | Msa0426490:intron | 40.0% | |
| CCGGTATTTGGAGAAATCAA+GGG | - | chr3_2:76889828-76889847 | None:intergenic | 40.0% | |
| CCCTTGATTTCTCCAAATAC+CGG | + | chr3_2:76889825-76889844 | Msa0426490:CDS | 40.0% | |
| ACCGGTATTTGGAGAAATCA+AGG | - | chr3_2:76889829-76889848 | None:intergenic | 40.0% | |
| TTCAAATACTTAGCCAGCTC+AGG | + | chr3_2:76889973-76889992 | Msa0426490:intron | 40.0% | |
| TCAAATACTTAGCCAGCTCA+GGG | + | chr3_2:76889974-76889993 | Msa0426490:intron | 40.0% | |
| CCAGCACAGTTCATAAAAAC+AGG | - | chr3_2:76890107-76890126 | None:intergenic | 40.0% | |
| !!! | CCTGTTTTTATGAACTGTGC+TGG | + | chr3_2:76890104-76890123 | Msa0426490:intron | 40.0% |
| ! | TTTCTCTCTGGAAACAATGC+AGG | + | chr3_2:76890515-76890534 | Msa0426490:intron | 40.0% |
| ! | TTCTCTCTGGAAACAATGCA+GGG | + | chr3_2:76890516-76890535 | Msa0426490:intron | 40.0% |
| TTAGTGGTTTATGGTGATCC+AGG | + | chr3_2:76890799-76890818 | Msa0426490:intron | 40.0% | |
| TCAATTATACAAGCCCAACC+TGG | - | chr3_2:76890820-76890839 | None:intergenic | 40.0% | |
| GTAGCTTGATTGCGAGTTAA+GGG | - | chr3_2:76891076-76891095 | None:intergenic | 40.0% | |
| TGAGAAACAGAGAGAGAGAC+AGG | + | chr3_2:76886672-76886691 | Msa0426490:five_prime_UTR | 45.0% | |
| CAGAGAGAGAGACAGGAATT+TGG | + | chr3_2:76886679-76886698 | Msa0426490:five_prime_UTR | 45.0% | |
| GATCGGAATGCAAAACGTGA+AGG | - | chr3_2:76886726-76886745 | None:intergenic | 45.0% | |
| GGGAAAGAGTCAAAGAGGAA+AGG | - | chr3_2:76886871-76886890 | None:intergenic | 45.0% | |
| TGTTCAATAGCTAGGGGTTC+TGG | + | chr3_2:76887550-76887569 | Msa0426490:intron | 45.0% | |
| TTAGGAGGAGTTGCAACTAC+AGG | + | chr3_2:76887617-76887636 | Msa0426490:intron | 45.0% | |
| !! | AATGGATTGTTTCCTCCACG+AGG | - | chr3_2:76887724-76887743 | None:intergenic | 45.0% |
| GCTGCAGAAGTAGTACAAAG+CGG | + | chr3_2:76887796-76887815 | Msa0426490:intron | 45.0% | |
| CTGCAGAAGTAGTACAAAGC+GGG | + | chr3_2:76887797-76887816 | Msa0426490:intron | 45.0% | |
| ! | GAATTGCCAGGCACTGTTAA+TGG | - | chr3_2:76888149-76888168 | None:intergenic | 45.0% |
| CTGTCATTGATGTCTGCATC+TGG | - | chr3_2:76888443-76888462 | None:intergenic | 45.0% | |
| TTAGCTGCTGGAACAAGTCA+TGG | + | chr3_2:76888512-76888531 | Msa0426490:CDS | 45.0% | |
| CGCCTGAAAGTCTCTTTGAA+AGG | - | chr3_2:76888560-76888579 | None:intergenic | 45.0% | |
| ! | TTTGGGATGATCATCAGAGC+AGG | + | chr3_2:76888690-76888709 | Msa0426490:CDS | 45.0% |
| TGCATGCTTCACTCTGACAA+CGG | + | chr3_2:76888994-76889013 | Msa0426490:CDS | 45.0% | |
| TCTCACTAGCAGTTGCAAGA+AGG | - | chr3_2:76889027-76889046 | None:intergenic | 45.0% | |
| TCTTGCAACTGCTAGTGAGA+AGG | + | chr3_2:76889027-76889046 | Msa0426490:CDS | 45.0% | |
| CTTGCAACTGCTAGTGAGAA+GGG | + | chr3_2:76889028-76889047 | Msa0426490:CDS | 45.0% | |
| GGGTCTCGTTTACAAGAAGT+AGG | + | chr3_2:76889082-76889101 | Msa0426490:intron | 45.0% | |
| TGGACAACCCAAGAATGTTG+AGG | - | chr3_2:76889504-76889523 | None:intergenic | 45.0% | |
| ! | TGGGTTGTCCACGATAGTTT+TGG | + | chr3_2:76889513-76889532 | Msa0426490:intron | 45.0% |
| !!! | GTCCACGATAGTTTTGGAAG+TGG | + | chr3_2:76889519-76889538 | Msa0426490:intron | 45.0% |
| TTGGCAGCATCAAGTGACAA+AGG | + | chr3_2:76889687-76889706 | Msa0426490:CDS | 45.0% | |
| !! | AACTTGAGAGTGAGGGTGTT+TGG | + | chr3_2:76889726-76889745 | Msa0426490:CDS | 45.0% |
| !! | ACTTGAGAGTGAGGGTGTTT+GGG | + | chr3_2:76889727-76889746 | Msa0426490:CDS | 45.0% |
| TCAGGTGCTCTGCATTACAA+AGG | - | chr3_2:76889900-76889919 | None:intergenic | 45.0% | |
| CATAATATAGCTCCCTGAGC+TGG | - | chr3_2:76889989-76890008 | None:intergenic | 45.0% | |
| ! | TCTCTCTGGAAACAATGCAG+GGG | + | chr3_2:76890517-76890536 | Msa0426490:intron | 45.0% |
| CAGAACACTGTCCTAATCTC+TGG | + | chr3_2:76890626-76890645 | Msa0426490:CDS | 45.0% | |
| TTCCATCCATGCCAGAGATT+AGG | - | chr3_2:76890640-76890659 | None:intergenic | 45.0% | |
| TAATCTCTGGCATGGATGGA+AGG | + | chr3_2:76890639-76890658 | Msa0426490:CDS | 45.0% | |
| TGGTTTATGGTGATCCAGGT+TGG | + | chr3_2:76890803-76890822 | Msa0426490:intron | 45.0% | |
| GGTTTATGGTGATCCAGGTT+GGG | + | chr3_2:76890804-76890823 | Msa0426490:intron | 45.0% | |
| GGTAGCTTGATTGCGAGTTA+AGG | - | chr3_2:76891077-76891096 | None:intergenic | 45.0% | |
| ACAATCCTCCAACTGAGATG+GGG | - | chr3_2:76891765-76891784 | None:intergenic | 45.0% | |
| GACAATCCTCCAACTGAGAT+GGG | - | chr3_2:76891766-76891785 | None:intergenic | 45.0% | |
| CATCTCAGTTGGAGGATTGT+CGG | + | chr3_2:76891765-76891784 | Msa0426490:three_prime_UTR | 45.0% | |
| ! | CTTCTTCATCCCTGGTAACG+CGG | + | chr3_2:76886762-76886781 | Msa0426490:intron | 50.0% |
| TTGCGTAAACCGCGTTACCA+GGG | - | chr3_2:76886774-76886793 | None:intergenic | 50.0% | |
| ATTGCGTAAACCGCGTTACC+AGG | - | chr3_2:76886775-76886794 | None:intergenic | 50.0% | |
| GCGATGGGAAAGAGTCAAAG+AGG | - | chr3_2:76886876-76886895 | None:intergenic | 50.0% | |
| ! | TCAATAGCTAGGGGTTCTGG+TGG | + | chr3_2:76887553-76887572 | Msa0426490:intron | 50.0% |
| ! | ATGCTTGCTTGTTGCAGCCT+GGG | - | chr3_2:76888191-76888210 | None:intergenic | 50.0% |
| AAGATGAGGCCCCACTATTG+GGG | - | chr3_2:76888409-76888428 | None:intergenic | 50.0% | |
| GAAGATGAGGCCCCACTATT+GGG | - | chr3_2:76888410-76888429 | None:intergenic | 50.0% | |
| AGAAGATGAGGCCCCACTAT+TGG | - | chr3_2:76888411-76888430 | None:intergenic | 50.0% | |
| ATTGATGTCTGCATCTGGCC+GGG | - | chr3_2:76888438-76888457 | None:intergenic | 50.0% | |
| CATTGATGTCTGCATCTGGC+CGG | - | chr3_2:76888439-76888458 | None:intergenic | 50.0% | |
| CAAGCGCTAGGATGTTGCTA+CGG | - | chr3_2:76888625-76888644 | None:intergenic | 50.0% | |
| AGCAACATCCTAGCGCTTGT+TGG | + | chr3_2:76888626-76888645 | Msa0426490:CDS | 50.0% | |
| GATCATCAGAGCAGGTGCAT+TGG | + | chr3_2:76888698-76888717 | Msa0426490:CDS | 50.0% | |
| ACTTCTCCTTTGTGACGACC+TGG | - | chr3_2:76888914-76888933 | None:intergenic | 50.0% | |
| TGCTTCACTCTGACAACGGA+CGG | + | chr3_2:76888998-76889017 | Msa0426490:CDS | 50.0% | |
| AGGTTAGAAGAGGGGTGGAT+AGG | + | chr3_2:76889622-76889641 | Msa0426490:intron | 50.0% | |
| GGTTAGAAGAGGGGTGGATA+GGG | + | chr3_2:76889623-76889642 | Msa0426490:intron | 50.0% | |
| !! | CTTGAGAGTGAGGGTGTTTG+GGG | + | chr3_2:76889728-76889747 | Msa0426490:CDS | 50.0% |
| GATGAAGTAGTACAGGCCCT+TGG | - | chr3_2:76889782-76889801 | None:intergenic | 50.0% | |
| ! | TGATGAATTGGGGTTGGCAC+CGG | - | chr3_2:76889847-76889866 | None:intergenic | 50.0% |
| CACTGTCCTAATCTCTGGCA+TGG | + | chr3_2:76890631-76890650 | Msa0426490:CDS | 50.0% | |
| GTCCTAATCTCTGGCATGGA+TGG | + | chr3_2:76890635-76890654 | Msa0426490:CDS | 50.0% | |
| TCAACTGCAAAGCATGCGTG+AGG | - | chr3_2:76891362-76891381 | None:intergenic | 50.0% | |
| CATGATTCCCCCATCTCAGT+TGG | + | chr3_2:76891754-76891773 | Msa0426490:three_prime_UTR | 50.0% | |
| CAATCCTCCAACTGAGATGG+GGG | - | chr3_2:76891764-76891783 | None:intergenic | 50.0% | |
| CGACAATCCTCCAACTGAGA+TGG | - | chr3_2:76891767-76891786 | None:intergenic | 50.0% | |
| !! | ATTGAGGCAAGAGGGTACCG+TGG | - | chr3_2:76887105-76887124 | None:intergenic | 55.0% |
| ! | AGGGGTTCTGGTGGTAGTAG+TGG | + | chr3_2:76887562-76887581 | Msa0426490:intron | 55.0% |
| AGTAGCAGGAGGGAATTGCC+AGG | - | chr3_2:76888161-76888180 | None:intergenic | 55.0% | |
| GGGGGATGAAAGTAGCAGGA+GGG | - | chr3_2:76888171-76888190 | None:intergenic | 55.0% | |
| TGGGGGATGAAAGTAGCAGG+AGG | - | chr3_2:76888172-76888191 | None:intergenic | 55.0% | |
| !! | TCCTGCTACTTTCATCCCCC+AGG | + | chr3_2:76888171-76888190 | Msa0426490:intron | 55.0% |
| ! | TGCTTGCTTGTTGCAGCCTG+GGG | - | chr3_2:76888190-76888209 | None:intergenic | 55.0% |
| ! | CATGCTTGCTTGTTGCAGCC+TGG | - | chr3_2:76888192-76888211 | None:intergenic | 55.0% |
| GGGCCTCATCTTCTCTTTCC+CGG | + | chr3_2:76888417-76888436 | Msa0426490:CDS | 55.0% | |
| TGGCCGGGAAAGAGAAGATG+AGG | - | chr3_2:76888423-76888442 | None:intergenic | 55.0% | |
| GACTACGGTTGCTTAGCTGC+TGG | + | chr3_2:76888500-76888519 | Msa0426490:CDS | 55.0% | |
| CTACAGCACCAACAAGCGCT+AGG | - | chr3_2:76888637-76888656 | None:intergenic | 55.0% | |
| GAAAGACAGCACAACCCCCT+AGG | - | chr3_2:76888860-76888879 | None:intergenic | 55.0% | |
| GCTTGTCCAGGTCGTCACAA+AGG | + | chr3_2:76888905-76888924 | Msa0426490:CDS | 55.0% | |
| GCTTCACTCTGACAACGGAC+GGG | + | chr3_2:76888999-76889018 | Msa0426490:CDS | 55.0% | |
| CGTGTAGGTTAGAAGAGGGG+TGG | + | chr3_2:76889617-76889636 | Msa0426490:intron | 55.0% | |
| CTCTGTCTCCCAATGTCCAG+TGG | + | chr3_2:76889664-76889683 | Msa0426490:CDS | 55.0% | |
| GTCTCCCAATGTCCAGTGGT+TGG | + | chr3_2:76889668-76889687 | Msa0426490:CDS | 55.0% | |
| GCTGCCAACCACTGGACATT+GGG | - | chr3_2:76889675-76889694 | None:intergenic | 55.0% | |
| TGCTGCCAACCACTGGACAT+TGG | - | chr3_2:76889676-76889695 | None:intergenic | 55.0% | |
| CACTTGATGCTGCCAACCAC+TGG | - | chr3_2:76889683-76889702 | None:intergenic | 55.0% | |
| ATACGCCCAACTGCTGTCCA+AGG | + | chr3_2:76889762-76889781 | Msa0426490:CDS | 55.0% | |
| TACGCCCAACTGCTGTCCAA+GGG | + | chr3_2:76889763-76889782 | Msa0426490:CDS | 55.0% | |
| !! | TTGGGGTTGGCACCGGTATT+TGG | - | chr3_2:76889840-76889859 | None:intergenic | 55.0% |
| CTGCAAAGCATGCGTGAGGA+AGG | - | chr3_2:76891358-76891377 | None:intergenic | 55.0% | |
| TGGGGGAGAGATGTTGCAGA+AGG | + | chr3_2:76891590-76891609 | Msa0426490:CDS | 55.0% | |
| ACTACAAGTCCTCCACGAGC+TGG | + | chr3_2:76891662-76891681 | Msa0426490:three_prime_UTR | 55.0% | |
| GAAGAGTTTCCAGCTCGTGG+AGG | - | chr3_2:76891674-76891693 | None:intergenic | 55.0% | |
| GGAGAAGAGTTTCCAGCTCG+TGG | - | chr3_2:76891677-76891696 | None:intergenic | 55.0% | |
| GATTCCCCCATCTCAGTTGG+AGG | + | chr3_2:76891757-76891776 | Msa0426490:three_prime_UTR | 55.0% | |
| GCCTGGGGGATGAAAGTAGC+AGG | - | chr3_2:76888175-76888194 | None:intergenic | 60.0% | |
| ! | GCTTGCTTGTTGCAGCCTGG+GGG | - | chr3_2:76888189-76888208 | None:intergenic | 60.0% |
| !! | GAGAGTGAGGGTGTTTGGGG+AGG | + | chr3_2:76889731-76889750 | Msa0426490:CDS | 60.0% |
| CAGGCCCTTGGACAGCAGTT+GGG | - | chr3_2:76889770-76889789 | None:intergenic | 60.0% | |
| ACAGGCCCTTGGACAGCAGT+TGG | - | chr3_2:76889771-76889790 | None:intergenic | 60.0% | |
| CACTCAGCTGACGAGTCAGC+AGG | - | chr3_2:76890677-76890696 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 76886604 | 76892027 | 76886604 | ID=Msa0426490;Name=Msa0426490 |
| chr3_2 | mRNA | 76886604 | 76892027 | 76886604 | ID=Msa0426490-mRNA-1;Parent=Msa0426490;Name=Msa0426490-mRNA-1;_AED=0.02;_eAED=0.02;_QI=260|1|1|1|0.33|0.14|7|368|415 |
| chr3_2 | exon | 76886604 | 76886775 | 76886604 | ID=Msa0426490-mRNA-1:exon:19985;Parent=Msa0426490-mRNA-1 |
| chr3_2 | exon | 76887022 | 76887106 | 76887022 | ID=Msa0426490-mRNA-1:exon:19986;Parent=Msa0426490-mRNA-1 |
| chr3_2 | exon | 76888311 | 76889099 | 76888311 | ID=Msa0426490-mRNA-1:exon:19987;Parent=Msa0426490-mRNA-1 |
| chr3_2 | exon | 76889624 | 76889882 | 76889624 | ID=Msa0426490-mRNA-1:exon:19988;Parent=Msa0426490-mRNA-1 |
| chr3_2 | exon | 76890537 | 76890660 | 76890537 | ID=Msa0426490-mRNA-1:exon:19989;Parent=Msa0426490-mRNA-1 |
| chr3_2 | exon | 76891560 | 76891963 | 76891560 | ID=Msa0426490-mRNA-1:exon:19990;Parent=Msa0426490-mRNA-1 |
| chr3_2 | exon | 76891985 | 76892027 | 76891985 | ID=Msa0426490-mRNA-1:exon:19991;Parent=Msa0426490-mRNA-1 |
| chr3_2 | five_prime_UTR | 76886604 | 76886775 | 76886604 | ID=Msa0426490-mRNA-1:five_prime_utr;Parent=Msa0426490-mRNA-1 |
| chr3_2 | five_prime_UTR | 76887022 | 76887106 | 76887022 | ID=Msa0426490-mRNA-1:five_prime_utr;Parent=Msa0426490-mRNA-1 |
| chr3_2 | five_prime_UTR | 76888311 | 76888313 | 76888311 | ID=Msa0426490-mRNA-1:five_prime_utr;Parent=Msa0426490-mRNA-1 |
| chr3_2 | CDS | 76888314 | 76889099 | 76888314 | ID=Msa0426490-mRNA-1:cds;Parent=Msa0426490-mRNA-1 |
| chr3_2 | CDS | 76889624 | 76889882 | 76889624 | ID=Msa0426490-mRNA-1:cds;Parent=Msa0426490-mRNA-1 |
| chr3_2 | CDS | 76890537 | 76890660 | 76890537 | ID=Msa0426490-mRNA-1:cds;Parent=Msa0426490-mRNA-1 |
| chr3_2 | CDS | 76891560 | 76891638 | 76891560 | ID=Msa0426490-mRNA-1:cds;Parent=Msa0426490-mRNA-1 |
| chr3_2 | three_prime_UTR | 76891639 | 76891963 | 76891639 | ID=Msa0426490-mRNA-1:three_prime_utr;Parent=Msa0426490-mRNA-1 |
| chr3_2 | three_prime_UTR | 76891985 | 76892027 | 76891985 | ID=Msa0426490-mRNA-1:three_prime_utr;Parent=Msa0426490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
