Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676450 | XP_013443444.1 | 97.143 | 385 | 6 | 3 | 1 | 384 | 1 | 381 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676450 | sp|Q94CJ5|RER4_ARATH | 73.702 | 289 | 76 | 0 | 93 | 381 | 96 | 384 | 2.59e-160 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676450 | A0A072TIU5 | 97.143 | 385 | 6 | 3 | 1 | 384 | 1 | 381 | 0.0 | 748 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa0676450 | 0.808419 | 3.126166e-50 | -8.615850e-47 |
| Msa0018610 | Msa0676450 | 0.802566 | 5.279197e-49 | -8.615850e-47 |
| Msa0021240 | Msa0676450 | 0.801115 | 1.048263e-48 | -8.615850e-47 |
| Msa0021570 | Msa0676450 | 0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0027090 | Msa0676450 | 0.810914 | 9.094686e-51 | -8.615850e-47 |
| Msa0028940 | Msa0676450 | 0.800689 | 1.281224e-48 | -8.615850e-47 |
| Msa0042950 | Msa0676450 | 0.831079 | 2.045297e-55 | -8.615850e-47 |
| Msa0044700 | Msa0676450 | 0.824767 | 6.753659e-54 | -8.615850e-47 |
| Msa0046020 | Msa0676450 | 0.818079 | 2.363457e-52 | -8.615850e-47 |
| Msa0050310 | Msa0676450 | 0.805217 | 1.484759e-49 | -8.615850e-47 |
| Msa0067820 | Msa0676450 | 0.816712 | 4.801985e-52 | -8.615850e-47 |
| Msa0069230 | Msa0676450 | 0.802463 | 5.543952e-49 | -8.615850e-47 |
| Msa0075820 | Msa0676450 | 0.810443 | 1.149840e-50 | -8.615850e-47 |
| Msa0081440 | Msa0676450 | 0.805483 | 1.306082e-49 | -8.615850e-47 |
| Msa0085470 | Msa0676450 | 0.820936 | 5.269168e-53 | -8.615850e-47 |
| Msa0089700 | Msa0676450 | 0.819432 | 1.165270e-52 | -8.615850e-47 |
| Msa0094170 | Msa0676450 | 0.805289 | 1.434239e-49 | -8.615850e-47 |
| Msa0097490 | Msa0676450 | 0.808273 | 3.357836e-50 | -8.615850e-47 |
| Msa0109380 | Msa0676450 | 0.817752 | 2.802292e-52 | -8.615850e-47 |
| Msa0113910 | Msa0676450 | 0.801923 | 7.161344e-49 | -8.615850e-47 |
| Msa0605210 | Msa0676450 | 0.802245 | 6.148610e-49 | -8.615850e-47 |
| Msa0608720 | Msa0676450 | 0.807915 | 4.002328e-50 | -8.615850e-47 |
| Msa0619690 | Msa0676450 | 0.819167 | 1.338691e-52 | -8.615850e-47 |
| Msa0623470 | Msa0676450 | 0.803176 | 3.950141e-49 | -8.615850e-47 |
| Msa0634900 | Msa0676450 | 0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0646310 | Msa0676450 | 0.802493 | 5.465370e-49 | -8.615850e-47 |
| Msa0652270 | Msa0676450 | 0.804510 | 2.087164e-49 | -8.615850e-47 |
| Msa0655980 | Msa0676450 | 0.810471 | 1.134143e-50 | -8.615850e-47 |
| Msa0660160 | Msa0676450 | 0.804280 | 2.330517e-49 | -8.615850e-47 |
| Msa0661540 | Msa0676450 | 0.802817 | 4.686099e-49 | -8.615850e-47 |
| Msa0673620 | Msa0676450 | 0.826852 | 2.160435e-54 | -8.615850e-47 |
| Msa0676450 | Msa0676570 | 0.819514 | 1.116238e-52 | -8.615850e-47 |
| Msa0676450 | Msa0677160 | 0.832481 | 9.224362e-56 | -8.615850e-47 |
| Msa0676450 | Msa0681190 | 0.806942 | 6.437328e-50 | -8.615850e-47 |
| Msa0676450 | Msa0693050 | 0.809423 | 1.906476e-50 | -8.615850e-47 |
| Msa0676450 | Msa0694800 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0676450 | Msa0695250 | 0.801654 | 8.129536e-49 | -8.615850e-47 |
| Msa0676450 | Msa0695470 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
| Msa0676450 | Msa0699200 | 0.838480 | 2.805134e-57 | -8.615850e-47 |
| Msa0676450 | Msa0699900 | 0.800853 | 1.185942e-48 | -8.615850e-47 |
| Msa0676450 | Msa0706300 | 0.800444 | 1.437408e-48 | -8.615850e-47 |
| Msa0676450 | Msa0713570 | 0.806584 | 7.662881e-50 | -8.615850e-47 |
| Msa0676450 | Msa0751490 | 0.807655 | 4.545200e-50 | -8.615850e-47 |
| Msa0676450 | Msa0752950 | 0.800055 | 1.724570e-48 | -8.615850e-47 |
| Msa0676450 | Msa0754880 | 0.815774 | 7.780573e-52 | -8.615850e-47 |
| Msa0676450 | Msa0755550 | 0.809564 | 1.778061e-50 | -8.615850e-47 |
| Msa0676450 | Msa0757390 | 0.843640 | 1.237666e-58 | -8.615850e-47 |
| Msa0676450 | Msa0770050 | 0.827783 | 1.292975e-54 | -8.615850e-47 |
| Msa0676450 | Msa0793130 | 0.818582 | 1.818649e-52 | -8.615850e-47 |
| Msa0676450 | Msa0796840 | 0.807831 | 4.171319e-50 | -8.615850e-47 |
| Msa0676450 | Msa0797180 | 0.804605 | 1.993385e-49 | -8.615850e-47 |
| Msa0676450 | Msa0826820 | 0.822359 | 2.471506e-53 | -8.615850e-47 |
| Msa0676450 | Msa0833980 | 0.824205 | 9.156581e-54 | -8.615850e-47 |
| Msa0676450 | Msa0838120 | 0.800157 | 1.644138e-48 | -8.615850e-47 |
| Msa0676450 | Msa0841570 | 0.844224 | 8.629955e-59 | -8.615850e-47 |
| Msa0676450 | Msa0865500 | 0.827674 | 1.373500e-54 | -8.615850e-47 |
| Msa0676450 | Msa0866060 | 0.817845 | 2.669788e-52 | -8.615850e-47 |
| Msa0676450 | Msa0866150 | 0.805329 | 1.406880e-49 | -8.615850e-47 |
| Msa0676450 | Msa0868510 | 0.812026 | 5.214496e-51 | -8.615850e-47 |
| Msa0676450 | Msa0868520 | 0.826177 | 3.129542e-54 | -8.615850e-47 |
| Msa0676450 | Msa0872890 | 0.815637 | 8.348414e-52 | -8.615850e-47 |
| Msa0676450 | Msa0876680 | 0.818656 | 1.749410e-52 | -8.615850e-47 |
| Msa0676450 | Msa0888520 | 0.810012 | 1.424023e-50 | -8.615850e-47 |
| Msa0676450 | Msa0929440 | 0.807431 | 5.072969e-50 | -8.615850e-47 |
| Msa0676450 | Msa0933320 | 0.822636 | 2.130922e-53 | -8.615850e-47 |
| Msa0676450 | Msa0941410 | 0.815405 | 9.401308e-52 | -8.615850e-47 |
| Msa0676450 | Msa0941420 | 0.832709 | 8.098321e-56 | -8.615850e-47 |
| Msa0676450 | Msa0945160 | 0.805637 | 1.212646e-49 | -8.615850e-47 |
| Msa0676450 | Msa0967890 | 0.819713 | 1.005391e-52 | -8.615850e-47 |
| Msa0676450 | Msa0968060 | 0.805500 | 1.295244e-49 | -8.615850e-47 |
| Msa0676450 | Msa0971100 | 0.823990 | 1.028710e-53 | -8.615850e-47 |
| Msa0676450 | Msa0978540 | 0.824731 | 6.884179e-54 | -8.615850e-47 |
| Msa0676450 | Msa0978550 | 0.813414 | 2.590887e-51 | -8.615850e-47 |
| Msa0676450 | Msa0978560 | 0.832043 | 1.184150e-55 | -8.615850e-47 |
| Msa0676450 | Msa0993280 | 0.830970 | 2.175975e-55 | -8.615850e-47 |
| Msa0676450 | Msa1002550 | 0.804665 | 1.937487e-49 | -8.615850e-47 |
| Msa0676450 | Msa1015220 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0676450 | Msa1025040 | 0.814972 | 1.173367e-51 | -8.615850e-47 |
| Msa0676450 | Msa1031190 | 0.809171 | 2.158978e-50 | -8.615850e-47 |
| Msa0676450 | Msa1036370 | 0.810264 | 1.256696e-50 | -8.615850e-47 |
| Msa0676450 | Msa1037440 | 0.819556 | 1.091408e-52 | -8.615850e-47 |
| Msa0676450 | Msa1066830 | 0.807352 | 5.272408e-50 | -8.615850e-47 |
| Msa0676450 | Msa1070370 | 0.807872 | 4.087296e-50 | -8.615850e-47 |
| Msa0676450 | Msa1080610 | 0.819008 | 1.454739e-52 | -8.615850e-47 |
| Msa0676450 | Msa1080680 | 0.818359 | 2.043029e-52 | -8.615850e-47 |
| Msa0676450 | Msa1095880 | 0.811571 | 6.549049e-51 | -8.615850e-47 |
| Msa0676450 | Msa1102410 | 0.815509 | 8.913105e-52 | -8.615850e-47 |
| Msa0676450 | Msa1119420 | 0.806069 | 9.838914e-50 | -8.615850e-47 |
| Msa0676450 | Msa1126320 | 0.807225 | 5.608394e-50 | -8.615850e-47 |
| Msa0676450 | Msa1130850 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0676450 | Msa1143810 | 0.829917 | 3.936750e-55 | -8.615850e-47 |
| Msa0676450 | Msa1158180 | 0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa0676450 | Msa1167150 | 0.816525 | 5.287892e-52 | -8.615850e-47 |
| Msa0676450 | Msa1184100 | 0.803911 | 2.780289e-49 | -8.615850e-47 |
| Msa0676450 | Msa1190510 | 0.805492 | 1.300534e-49 | -8.615850e-47 |
| Msa0676450 | Msa1190670 | 0.800638 | 1.311807e-48 | -8.615850e-47 |
| Msa0676450 | Msa1199700 | 0.819735 | 9.934747e-53 | -8.615850e-47 |
| Msa0676450 | Msa1203320 | 0.801321 | 9.516206e-49 | -8.615850e-47 |
| Msa0676450 | Msa1218310 | 0.816755 | 4.694913e-52 | -8.615850e-47 |
| Msa0676450 | Msa1218350 | 0.819962 | 8.817285e-53 | -8.615850e-47 |
| Msa0676450 | Msa1222900 | 0.802024 | 6.825409e-49 | -8.615850e-47 |
| Msa0676450 | Msa1255480 | 0.803756 | 2.994109e-49 | -8.615850e-47 |
| Msa0676450 | Msa1257860 | 0.801306 | 9.584248e-49 | -8.615850e-47 |
| Msa0676450 | Msa1266750 | 0.800818 | 1.205741e-48 | -8.615850e-47 |
| Msa0676450 | Msa1267560 | 0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0676450 | Msa1297490 | 0.804557 | 2.039742e-49 | -8.615850e-47 |
| Msa0676450 | Msa1303690 | 0.813139 | 2.977905e-51 | -8.615850e-47 |
| Msa0676450 | Msa1310090 | 0.806675 | 7.332437e-50 | -8.615850e-47 |
| Msa0676450 | Msa1325560 | 0.842812 | 2.057017e-58 | -8.615850e-47 |
| Msa0676450 | Msa1331490 | 0.806599 | 7.605683e-50 | -8.615850e-47 |
| Msa0676450 | Msa1331530 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0676450 | Msa1341710 | 0.804802 | 1.813178e-49 | -8.615850e-47 |
| Msa0676450 | Msa1348180 | 0.825768 | 3.914958e-54 | -8.615850e-47 |
| Msa0676450 | Msa1350550 | 0.805824 | 1.107450e-49 | -8.615850e-47 |
| Msa0676450 | Msa1350590 | 0.806405 | 8.358303e-50 | -8.615850e-47 |
| Msa0676450 | Msa1363170 | 0.811613 | 6.412670e-51 | -8.615850e-47 |
| Msa0676450 | Msa1367690 | 0.802039 | 6.776421e-49 | -8.615850e-47 |
| Msa0676450 | Msa1373420 | 0.820429 | 6.891181e-53 | -8.615850e-47 |
| Msa0676450 | Msa1375570 | 0.801151 | 1.030999e-48 | -8.615850e-47 |
| Msa0676450 | Msa1375970 | 0.836711 | 7.971231e-57 | -8.615850e-47 |
| Msa0676450 | Msa1388010 | 0.821200 | 4.581811e-53 | -8.615850e-47 |
| Msa0676450 | Msa1393720 | 0.815338 | 9.728219e-52 | -8.615850e-47 |
| Msa0676450 | Msa1395380 | 0.804202 | 2.418696e-49 | -8.615850e-47 |
| Msa0676450 | Msa1401640 | 0.804193 | 2.428937e-49 | -8.615850e-47 |
| Msa0676450 | Msa1407160 | 0.810582 | 1.072808e-50 | -8.615850e-47 |
| Msa0676450 | Msa1415510 | 0.806879 | 6.639538e-50 | -8.615850e-47 |
| Msa0676450 | Msa1428050 | 0.815123 | 1.086147e-51 | -8.615850e-47 |
| Msa0676450 | Msa1440990 | 0.804395 | 2.205200e-49 | -8.615850e-47 |
| Msa0676450 | Msa1444130 | 0.806188 | 9.284569e-50 | -8.615850e-47 |
| Msa0676450 | Msa1444690 | 0.815092 | 1.103773e-51 | -8.615850e-47 |
| Msa0676450 | Msa1462700 | 0.816671 | 4.903971e-52 | -8.615850e-47 |
| Msa0122930 | Msa0676450 | 0.804496 | 2.101079e-49 | -8.615850e-47 |
| Msa0138800 | Msa0676450 | 0.819849 | 9.359549e-53 | -8.615850e-47 |
| Msa0145590 | Msa0676450 | 0.814020 | 1.905746e-51 | -8.615850e-47 |
| Msa0164310 | Msa0676450 | 0.831567 | 1.551704e-55 | -8.615850e-47 |
| Msa0173700 | Msa0676450 | 0.813502 | 2.477806e-51 | -8.615850e-47 |
| Msa0178840 | Msa0676450 | 0.818093 | 2.346471e-52 | -8.615850e-47 |
| Msa0187590 | Msa0676450 | 0.801522 | 8.653315e-49 | -8.615850e-47 |
| Msa0189150 | Msa0676450 | 0.817799 | 2.733457e-52 | -8.615850e-47 |
| Msa0189560 | Msa0676450 | 0.803779 | 2.961832e-49 | -8.615850e-47 |
| Msa0195810 | Msa0676450 | 0.808153 | 3.561732e-50 | -8.615850e-47 |
| Msa0195850 | Msa0676450 | 0.813296 | 2.750795e-51 | -8.615850e-47 |
| Msa0196620 | Msa0676450 | 0.803856 | 2.854986e-49 | -8.615850e-47 |
| Msa0212290 | Msa0676450 | 0.817526 | 3.150281e-52 | -8.615850e-47 |
| Msa0225080 | Msa0676450 | 0.822797 | 1.954565e-53 | -8.615850e-47 |
| Msa0225790 | Msa0676450 | 0.815928 | 7.190188e-52 | -8.615850e-47 |
| Msa0231180 | Msa0676450 | 0.810380 | 1.186400e-50 | -8.615850e-47 |
| Msa0371010 | Msa0676450 | 0.842835 | 2.028664e-58 | -8.615850e-47 |
| Msa0372570 | Msa0676450 | 0.804811 | 1.806066e-49 | -8.615850e-47 |
| Msa0379590 | Msa0676450 | 0.839921 | 1.186793e-57 | -8.615850e-47 |
| Msa0380470 | Msa0676450 | 0.817568 | 3.083062e-52 | -8.615850e-47 |
| Msa0404900 | Msa0676450 | 0.843614 | 1.257010e-58 | -8.615850e-47 |
| Msa0419150 | Msa0676450 | 0.833623 | 4.794516e-56 | -8.615850e-47 |
| Msa0428270 | Msa0676450 | 0.806301 | 8.793282e-50 | -8.615850e-47 |
| Msa0429490 | Msa0676450 | 0.803311 | 3.704383e-49 | -8.615850e-47 |
| Msa0431270 | Msa0676450 | 0.809479 | 1.853815e-50 | -8.615850e-47 |
| Msa0434830 | Msa0676450 | 0.805338 | 1.400655e-49 | -8.615850e-47 |
| Msa0436660 | Msa0676450 | 0.802411 | 5.681433e-49 | -8.615850e-47 |
| Msa0437820 | Msa0676450 | 0.819315 | 1.239146e-52 | -8.615850e-47 |
| Msa0450920 | Msa0676450 | 0.844337 | 8.045626e-59 | -8.615850e-47 |
| Msa0464980 | Msa0676450 | 0.829973 | 3.813495e-55 | -8.615850e-47 |
| Msa0470080 | Msa0676450 | 0.803892 | 2.805535e-49 | -8.615850e-47 |
| Msa0471480 | Msa0676450 | 0.840591 | 7.930673e-58 | -8.615850e-47 |
| Msa0473010 | Msa0676450 | 0.811235 | 7.748068e-51 | -8.615850e-47 |
| Msa0475430 | Msa0676450 | 0.804200 | 2.421324e-49 | -8.615850e-47 |
| Msa0252440 | Msa0676450 | 0.822073 | 2.878318e-53 | -8.615850e-47 |
| Msa0259450 | Msa0676450 | 0.805743 | 1.152183e-49 | -8.615850e-47 |
| Msa0259570 | Msa0676450 | 0.809772 | 1.604298e-50 | -8.615850e-47 |
| Msa0260580 | Msa0676450 | 0.805615 | 1.225258e-49 | -8.615850e-47 |
| Msa0260640 | Msa0676450 | 0.814661 | 1.375260e-51 | -8.615850e-47 |
| Msa0266150 | Msa0676450 | 0.818600 | 1.800793e-52 | -8.615850e-47 |
| Msa0269610 | Msa0676450 | 0.836380 | 9.680104e-57 | -8.615850e-47 |
| Msa0270730 | Msa0676450 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0275250 | Msa0676450 | 0.800162 | 1.640553e-48 | -8.615850e-47 |
| Msa0275260 | Msa0676450 | 0.802811 | 4.700152e-49 | -8.615850e-47 |
| Msa0276030 | Msa0676450 | 0.813876 | 2.049848e-51 | -8.615850e-47 |
| Msa0288300 | Msa0676450 | 0.801729 | 7.846692e-49 | -8.615850e-47 |
| Msa0304070 | Msa0676450 | 0.816591 | 5.109233e-52 | -8.615850e-47 |
| Msa0305630 | Msa0676450 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0315720 | Msa0676450 | 0.803025 | 4.244953e-49 | -8.615850e-47 |
| Msa0315760 | Msa0676450 | 0.807234 | 5.584327e-50 | -8.615850e-47 |
| Msa0317820 | Msa0676450 | 0.811168 | 8.010703e-51 | -8.615850e-47 |
| Msa0318280 | Msa0676450 | 0.809914 | 1.495088e-50 | -8.615850e-47 |
| Msa0318320 | Msa0676450 | 0.806308 | 8.761102e-50 | -8.615850e-47 |
| Msa0326170 | Msa0676450 | 0.800289 | 1.545367e-48 | -8.615850e-47 |
| Msa0329050 | Msa0676450 | 0.825015 | 5.901984e-54 | -8.615850e-47 |
| Msa0329360 | Msa0676450 | 0.808778 | 2.620320e-50 | -8.615850e-47 |
| Msa0334950 | Msa0676450 | 0.805751 | 1.147281e-49 | -8.615850e-47 |
| Msa0341950 | Msa0676450 | 0.801979 | 6.971865e-49 | -8.615850e-47 |
| Msa0490740 | Msa0676450 | 0.800863 | 1.180171e-48 | -8.615850e-47 |
| Msa0500580 | Msa0676450 | 0.812833 | 3.474356e-51 | -8.615850e-47 |
| Msa0506700 | Msa0676450 | 0.824070 | 9.848683e-54 | -8.615850e-47 |
| Msa0517190 | Msa0676450 | 0.819760 | 9.803980e-53 | -8.615850e-47 |
| Msa0520480 | Msa0676450 | 0.809524 | 1.813834e-50 | -8.615850e-47 |
| Msa0520550 | Msa0676450 | 0.850500 | 1.631380e-60 | -8.615850e-47 |
| Msa0532870 | Msa0676450 | 0.800875 | 1.173898e-48 | -8.615850e-47 |
| Msa0549700 | Msa0676450 | 0.811391 | 7.168161e-51 | -8.615850e-47 |
| Msa0557440 | Msa0676450 | 0.813874 | 2.052470e-51 | -8.615850e-47 |
| Msa0565370 | Msa0676450 | 0.815642 | 8.325773e-52 | -8.615850e-47 |
| Msa0565430 | Msa0676450 | 0.827253 | 1.732720e-54 | -8.615850e-47 |
| Msa0572880 | Msa0676450 | 0.814093 | 1.836320e-51 | -8.615850e-47 |
| Msa0578400 | Msa0676450 | 0.800019 | 1.753475e-48 | -8.615850e-47 |
| Msa0583270 | Msa0676450 | 0.812930 | 3.307908e-51 | -8.615850e-47 |
| Msa0588600 | Msa0676450 | 0.815798 | 7.685575e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676450 | MtrunA17_Chr4g0020011 | 97.143 | 385 | 6 | 3 | 1 | 384 | 1 | 381 | 0.0 | 748 |
| Msa0676450 | MtrunA17_Chr3g0090071 | 75.177 | 282 | 68 | 1 | 102 | 383 | 111 | 390 | 5.67e-158 | 449 |
| Msa0676450 | MtrunA17_Chr4g0039291 | 72.857 | 280 | 76 | 0 | 101 | 380 | 109 | 388 | 3.72e-153 | 437 |
| Msa0676450 | MtrunA17_Chr3g0114241 | 37.288 | 295 | 168 | 6 | 98 | 380 | 427 | 716 | 2.12e-55 | 194 |
| Msa0676450 | MtrunA17_Chr2g0320711 | 33.333 | 273 | 169 | 5 | 116 | 380 | 168 | 435 | 1.09e-38 | 143 |
| Msa0676450 | MtrunA17_Chr7g0240091 | 31.338 | 284 | 182 | 5 | 105 | 380 | 170 | 448 | 3.27e-32 | 126 |
| Msa0676450 | MtrunA17_Chr7g0245291 | 32.479 | 234 | 141 | 5 | 150 | 381 | 108 | 326 | 4.92e-29 | 115 |
| Msa0676450 | MtrunA17_Chr7g0245261 | 32.645 | 242 | 145 | 5 | 142 | 380 | 92 | 318 | 2.97e-26 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676450 | AT5G12470.1 | 73.702 | 289 | 76 | 0 | 93 | 381 | 96 | 384 | 2.64e-161 | 458 |
| Msa0676450 | AT3G56140.2 | 40.000 | 295 | 160 | 6 | 98 | 380 | 200 | 489 | 4.90e-60 | 202 |
| Msa0676450 | AT2G40400.2 | 40.339 | 295 | 159 | 6 | 98 | 380 | 410 | 699 | 8.24e-60 | 206 |
| Msa0676450 | AT2G40400.1 | 40.339 | 295 | 159 | 6 | 98 | 380 | 410 | 699 | 8.24e-60 | 206 |
| Msa0676450 | AT3G56140.1 | 40.000 | 295 | 160 | 6 | 98 | 380 | 419 | 708 | 1.28e-58 | 203 |
| Msa0676450 | AT3G56140.3 | 40.000 | 295 | 160 | 6 | 98 | 380 | 419 | 708 | 1.28e-58 | 203 |
| Msa0676450 | AT2G40400.3 | 39.184 | 245 | 133 | 5 | 98 | 330 | 410 | 650 | 2.80e-44 | 162 |
| Msa0676450 | AT5G22790.1 | 32.542 | 295 | 173 | 8 | 103 | 380 | 148 | 433 | 1.19e-35 | 135 |
| Msa0676450 | AT2G37860.3 | 31.633 | 294 | 176 | 9 | 103 | 380 | 148 | 432 | 3.09e-33 | 129 |
| Msa0676450 | AT2G37860.4 | 31.633 | 294 | 176 | 9 | 103 | 380 | 148 | 432 | 3.09e-33 | 129 |
| Msa0676450 | AT3G08630.1 | 31.356 | 236 | 141 | 5 | 154 | 384 | 104 | 323 | 3.20e-28 | 113 |
| Msa0676450 | AT3G08640.1 | 30.043 | 233 | 148 | 4 | 154 | 384 | 107 | 326 | 8.09e-26 | 107 |
| Msa0676450 | AT2G37860.2 | 29.268 | 205 | 127 | 5 | 103 | 294 | 148 | 347 | 1.10e-18 | 86.7 |
| Msa0676450 | AT2G37860.1 | 29.268 | 205 | 127 | 5 | 103 | 294 | 148 | 347 | 1.10e-18 | 86.7 |
Find 139 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCAAATGATGGGGTTTC+TGG | 0.110583 | 4_4:+27158879 | None:intergenic |
| TTTCGATGGTTGCTTAATTT+TGG | 0.265425 | 4_4:-27163018 | Msa0676450:CDS |
| AACCTTAATCCCTTATCTTC+TGG | 0.276851 | 4_4:+27159322 | None:intergenic |
| CGAGCCCAAGAAAGTGTTTC+CGG | 0.280740 | 4_4:+27159476 | None:intergenic |
| GGTGAAAGCGGGACGAGTTC+CGG | 0.283707 | 4_4:-27163085 | Msa0676450:CDS |
| AATACAACACAGCAACATTA+TGG | 0.296960 | 4_4:+27159226 | None:intergenic |
| ACCAACGGTGGCGGCGGAAT+TGG | 0.314588 | 4_4:-27163261 | Msa0676450:CDS |
| TTGAAGAAGAGTGGTGGTTT+TGG | 0.320949 | 4_4:+27163391 | None:intergenic |
| TAGAACCGGAAACACTTTCT+TGG | 0.331700 | 4_4:-27159481 | Msa0676450:CDS |
| GTCCAGAAGATAAGGGATTA+AGG | 0.331702 | 4_4:-27159324 | Msa0676450:exon |
| CACTTAACATGAGCTTGTTT+TGG | 0.340136 | 4_4:+27159520 | None:intergenic |
| ACCGTTGGTGGATGCATAAA+TGG | 0.349408 | 4_4:+27163275 | None:intergenic |
| CTTATTGCTAAATTCTTCTT+CGG | 0.353659 | 4_4:-27160867 | Msa0676450:CDS |
| CAACACTCAACAGGTGGCTT+TGG | 0.358033 | 4_4:-27160723 | Msa0676450:intron |
| GTGAAAGCGGGACGAGTTCC+GGG | 0.377853 | 4_4:-27163084 | Msa0676450:CDS |
| ATCTGCTTTGCTGTTAGAAC+CGG | 0.383744 | 4_4:-27159495 | Msa0676450:CDS |
| GGATGCATAAATGGCGGTTA+TGG | 0.384238 | 4_4:+27163284 | None:intergenic |
| AGAACCGGAAACACTTTCTT+GGG | 0.399853 | 4_4:-27159480 | Msa0676450:CDS |
| GGTGGCAGTGGAAGCGGTGG+AGG | 0.402348 | 4_4:-27163231 | Msa0676450:CDS |
| ACTCAACAGGTGGCTTTGGC+TGG | 0.406450 | 4_4:-27160719 | Msa0676450:intron |
| GGGATGGAGTGTAGAGAGAT+TGG | 0.407479 | 4_4:+27163476 | None:intergenic |
| GATGCATAAATGGCGGTTAT+GGG | 0.413302 | 4_4:+27163285 | None:intergenic |
| GGCGGCGGAATTGGAGAATC+AGG | 0.421149 | 4_4:-27163252 | Msa0676450:CDS |
| AAACAGAGAAGAAGCGTTGC+TGG | 0.424722 | 4_4:-27163163 | Msa0676450:CDS |
| TGATGATTTGTTTCTTGCTA+AGG | 0.429196 | 4_4:-27162971 | Msa0676450:CDS |
| GGATGGAGTGTAGAGAGATT+GGG | 0.435346 | 4_4:+27163477 | None:intergenic |
| ATTTCAGACTGCTGCGGAGT+TGG | 0.438593 | 4_4:-27161134 | Msa0676450:intron |
| GATGGATCTTTAACCTTCGC+TGG | 0.440135 | 4_4:+27159122 | None:intergenic |
| GGTGATGGTGGTGGCGATGA+TGG | 0.440223 | 4_4:-27163207 | Msa0676450:CDS |
| AATTCCGCCGCCACCGTTGG+TGG | 0.441978 | 4_4:+27163263 | None:intergenic |
| TGGCAGTATCTAGCAACTTA+AGG | 0.443496 | 4_4:-27159691 | Msa0676450:intron |
| GGCAGTGGAAGCGGTGGAGG+AGG | 0.448523 | 4_4:-27163228 | Msa0676450:CDS |
| AGAGAAAGAACGAGGGTGGA+TGG | 0.448523 | 4_4:+27163422 | None:intergenic |
| GAGAGATGGGAGTGGGAGAG+AGG | 0.449952 | 4_4:+27163368 | None:intergenic |
| AAGCTATTTGCAGTTGGGAC+TGG | 0.451891 | 4_4:-27160558 | Msa0676450:CDS |
| AAAGAAACAAAACGAAGAAA+AGG | 0.453763 | 4_4:+27158931 | None:intergenic |
| CCACCACCTTCCGTCAGTGC+TGG | 0.454269 | 4_4:-27160891 | Msa0676450:CDS |
| TCCAATTCCGCCGCCACCGT+TGG | 0.461696 | 4_4:+27163260 | None:intergenic |
| ACGGGGAGTGAAGAGGTTGT+TGG | 0.463805 | 4_4:+27163311 | None:intergenic |
| GTGGATTATGCTCGCTGGGT+TGG | 0.464416 | 4_4:-27159348 | Msa0676450:CDS |
| TGGACGACGGCGGGAGATGA+TGG | 0.465286 | 4_4:+27163344 | None:intergenic |
| ACCGCTTCGGCTAAATCCGC+TGG | 0.467208 | 4_4:+27163105 | None:intergenic |
| GTTTCTTGCTAAGGTTGCTA+TGG | 0.467525 | 4_4:-27162962 | Msa0676450:CDS |
| AGAAGCGTTGCTGGTACTTA+CGG | 0.475361 | 4_4:-27163154 | Msa0676450:CDS |
| CGTAGAGAAACCGTCGGAGC+AGG | 0.477222 | 4_4:+27160915 | None:intergenic |
| GGTGGGTGGATTATGCTCGC+TGG | 0.481668 | 4_4:-27159353 | Msa0676450:CDS |
| TGTTGCCTATGGGGTTTACA+TGG | 0.487654 | 4_4:-27159711 | Msa0676450:CDS |
| ATGAGAATGTGGACGACGGC+GGG | 0.489108 | 4_4:+27163335 | None:intergenic |
| GAAAGAACGAGGGTGGATGG+TGG | 0.490060 | 4_4:+27163425 | None:intergenic |
| TATTGTGTCATGAAATCAAT+CGG | 0.492810 | 4_4:-27159285 | Msa0676450:three_prime_UTR |
| TTATCAACGAGTGTTGCCTA+TGG | 0.493065 | 4_4:-27159722 | Msa0676450:CDS |
| AGCGGTGGAGGAGGTGATGG+TGG | 0.494404 | 4_4:-27163219 | Msa0676450:CDS |
| TACGGAAGTAGGTAAGTCAT+TGG | 0.495225 | 4_4:-27163136 | Msa0676450:CDS |
| ATCTTTAACCTTCGCTGGAG+TGG | 0.496417 | 4_4:+27159127 | None:intergenic |
| GAATCAGGTGGCAGTGGAAG+CGG | 0.497526 | 4_4:-27163237 | Msa0676450:CDS |
| GGGTTGGAGTCCAGAAGATA+AGG | 0.497889 | 4_4:-27159332 | Msa0676450:CDS |
| TATCAACGAGTGTTGCCTAT+GGG | 0.498398 | 4_4:-27159721 | Msa0676450:CDS |
| TGATGGAGAGAGATGGGAGT+GGG | 0.500386 | 4_4:+27163361 | None:intergenic |
| TGTGTGGCTTCCTGCTCCGA+CGG | 0.501035 | 4_4:-27160925 | Msa0676450:CDS |
| ACCAGGTATCAAATTCTAGC+TGG | 0.501427 | 4_4:-27159579 | Msa0676450:intron |
| GGAGAGAGGTTGAAGAAGAG+TGG | 0.502379 | 4_4:+27163382 | None:intergenic |
| AGTTGGGACTGGTGCATCAC+TGG | 0.504898 | 4_4:-27160547 | Msa0676450:intron |
| GCATCCACCAACGGTGGCGG+CGG | 0.506271 | 4_4:-27163267 | Msa0676450:CDS |
| GGAAGCGGTGGAGGAGGTGA+TGG | 0.507443 | 4_4:-27163222 | Msa0676450:CDS |
| GAGCTAAGCTATTTGCAGTT+GGG | 0.507915 | 4_4:-27160563 | Msa0676450:CDS |
| CGCATTGATTAATGCGCGGA+AGG | 0.511156 | 4_4:-27159789 | Msa0676450:CDS |
| TATTCACTTATACAGAGAAT+AGG | 0.511633 | 4_4:-27160689 | Msa0676450:CDS |
| GGAGCTAAGCTATTTGCAGT+TGG | 0.516112 | 4_4:-27160564 | Msa0676450:CDS |
| CAATAGAGAAGAGAAGAAAG+TGG | 0.517030 | 4_4:+27158955 | None:intergenic |
| AAGCATAAAATCTGCTACAA+TGG | 0.517084 | 4_4:+27160947 | None:intergenic |
| CGGGAGATGATGGAGAGAGA+TGG | 0.517838 | 4_4:+27163354 | None:intergenic |
| AATGGCGGTTATGGGAGGAC+GGG | 0.519477 | 4_4:+27163293 | None:intergenic |
| TCGTCCCGCTTTCACCGCTT+CGG | 0.521428 | 4_4:+27163092 | None:intergenic |
| TGGTGATAATTGAAGACTCT+TGG | 0.526733 | 4_4:+27159160 | None:intergenic |
| TACACTCCATCCCATGGCCA+TGG | 0.528152 | 4_4:-27163466 | Msa0676450:exon |
| AGCAATAAGTCCAGCACTGA+CGG | 0.529127 | 4_4:+27160881 | None:intergenic |
| AGAGAGAGAAAGAACGAGGG+TGG | 0.530359 | 4_4:+27163418 | None:intergenic |
| TGGGAGGACGGGGAGTGAAG+AGG | 0.531428 | 4_4:+27163304 | None:intergenic |
| GGTGGAGGAGGTGATGGTGG+TGG | 0.536613 | 4_4:-27163216 | Msa0676450:CDS |
| GTGGGTGGATTATGCTCGCT+GGG | 0.540441 | 4_4:-27159352 | Msa0676450:CDS |
| ATGATGGAGAGAGATGGGAG+TGG | 0.546774 | 4_4:+27163360 | None:intergenic |
| TTAGCCGAAGCGGTGAAAGC+GGG | 0.547028 | 4_4:-27163096 | Msa0676450:CDS |
| GGGAGATGATGGAGAGAGAT+GGG | 0.548685 | 4_4:+27163355 | None:intergenic |
| TATGCATCCACCAACGGTGG+CGG | 0.553293 | 4_4:-27163270 | Msa0676450:CDS |
| GGTGGACCGACCGTGTGGAG+TGG | 0.555225 | 4_4:+27163499 | None:intergenic |
| TGGAGAGAGAGAAAGAACGA+GGG | 0.556227 | 4_4:+27163415 | None:intergenic |
| AAATGGCGGTTATGGGAGGA+CGG | 0.556308 | 4_4:+27163292 | None:intergenic |
| ATTGGAGAATCAGGTGGCAG+TGG | 0.557497 | 4_4:-27163243 | Msa0676450:CDS |
| GAGAGGTTGAAGAAGAGTGG+TGG | 0.558566 | 4_4:+27163385 | None:intergenic |
| ACAGAGAATAGGTGCTATTG+TGG | 0.560956 | 4_4:-27160678 | Msa0676450:intron |
| TCCTCTCCACTCCACACGGT+CGG | 0.561604 | 4_4:-27163505 | Msa0676450:five_prime_UTR |
| GCCATTTATGCATCCACCAA+CGG | 0.563296 | 4_4:-27163276 | Msa0676450:CDS |
| TTGCTGGTACTTACGGAAGT+AGG | 0.563924 | 4_4:-27163147 | Msa0676450:CDS |
| GGTTGGAGTCCAGAAGATAA+GGG | 0.564296 | 4_4:-27159331 | Msa0676450:CDS |
| AAGAAGCCATGGCCATGGGA+TGG | 0.570088 | 4_4:+27163460 | None:intergenic |
| CGGTGTTGGCATCTTTACAA+AGG | 0.571151 | 4_4:-27162935 | Msa0676450:intron |
| GCAACACTCGTTGATAATAC+CGG | 0.574937 | 4_4:+27159728 | None:intergenic |
| GTGGAGAGAGAGAAAGAACG+AGG | 0.576448 | 4_4:+27163414 | None:intergenic |
| TCAGGTGGCAGTGGAAGCGG+TGG | 0.578703 | 4_4:-27163234 | Msa0676450:CDS |
| GTTGCTATGGAATGCGGTGT+TGG | 0.583902 | 4_4:-27162949 | Msa0676450:CDS |
| CCAGCACTGACGGAAGGTGG+TGG | 0.601074 | 4_4:+27160891 | None:intergenic |
| TGATGAAGAAGCCATGGCCA+TGG | 0.605310 | 4_4:+27163455 | None:intergenic |
| AATCTCTTCACAATCGAACC+CGG | 0.607903 | 4_4:+27163066 | None:intergenic |
| TAGCTGGAATTATTGAACAA+CGG | 0.608049 | 4_4:-27159563 | Msa0676450:CDS |
| GATCCATCGACATAGCTAGC+AGG | 0.608851 | 4_4:-27159107 | Msa0676450:three_prime_UTR |
| TCATCTCTTCTGCAGCGGAA+CGG | 0.609103 | 4_4:-27160585 | Msa0676450:intron |
| GCATAAATGGCGGTTATGGG+AGG | 0.612260 | 4_4:+27163288 | None:intergenic |
| GATGGAGTGTAGAGAGATTG+GGG | 0.614439 | 4_4:+27163478 | None:intergenic |
| CATAGTGTCCACTCCAGCGA+AGG | 0.615377 | 4_4:-27159135 | Msa0676450:three_prime_UTR |
| GACTTCCTCTCCACTCCACA+CGG | 0.617175 | 4_4:-27163509 | Msa0676450:five_prime_UTR |
| TTTAGCCGAAGCGGTGAAAG+CGG | 0.617657 | 4_4:-27163097 | Msa0676450:CDS |
| TGACGAGGCAGAGGAAGTAC+CGG | 0.617957 | 4_4:-27159747 | Msa0676450:CDS |
| ATCAACGAGTGTTGCCTATG+GGG | 0.625712 | 4_4:-27159720 | Msa0676450:CDS |
| AATGAGAATGTGGACGACGG+CGG | 0.628298 | 4_4:+27163334 | None:intergenic |
| TCTCTCTACACTCCATCCCA+TGG | 0.629893 | 4_4:-27163472 | Msa0676450:exon |
| AGTCCAGCACTGACGGAAGG+TGG | 0.630398 | 4_4:+27160888 | None:intergenic |
| GAATGATGATGAAGAAGCCA+TGG | 0.630932 | 4_4:+27163449 | None:intergenic |
| ATGGCGGTTATGGGAGGACG+GGG | 0.632753 | 4_4:+27163294 | None:intergenic |
| AGGTTGTTGGAATGAGAATG+TGG | 0.632978 | 4_4:+27163324 | None:intergenic |
| GATGAAGAAGCCATGGCCAT+GGG | 0.633092 | 4_4:+27163456 | None:intergenic |
| AGTCCTGCTAGCTATGTCGA+TGG | 0.635552 | 4_4:+27159104 | None:intergenic |
| ACCGACCGTGTGGAGTGGAG+AGG | 0.636694 | 4_4:+27163504 | None:intergenic |
| ATTGGGGTGGACCGACCGTG+TGG | 0.642946 | 4_4:+27163494 | None:intergenic |
| GCCAGCGGATTTAGCCGAAG+CGG | 0.643103 | 4_4:-27163106 | Msa0676450:CDS |
| GCTAAGGTTGCTATGGAATG+CGG | 0.648096 | 4_4:-27162955 | Msa0676450:CDS |
| ATAAGTCCAGCACTGACGGA+AGG | 0.648262 | 4_4:+27160885 | None:intergenic |
| GTCATTGGAGAATTTGCCAG+CGG | 0.655188 | 4_4:-27163121 | Msa0676450:CDS |
| GGCGGAATTGGAGAATCAGG+TGG | 0.664062 | 4_4:-27163249 | Msa0676450:CDS |
| TCTTCGCATGAATAGGTGGG+TGG | 0.667742 | 4_4:-27159367 | Msa0676450:intron |
| TACTGCCATGTAAACCCCAT+AGG | 0.674032 | 4_4:+27159706 | None:intergenic |
| GTTTACATTTCAGACTGCTG+CGG | 0.677064 | 4_4:-27161140 | Msa0676450:intron |
| GCTGGAGTGGACACTATGCG+TGG | 0.684722 | 4_4:+27159140 | None:intergenic |
| TGGCGATGATGGTGAATCAG+AGG | 0.693089 | 4_4:-27163196 | Msa0676450:CDS |
| ATTTATGCATCCACCAACGG+TGG | 0.707895 | 4_4:-27163273 | Msa0676450:CDS |
| GTTGGTGGATGCATAAATGG+CGG | 0.713035 | 4_4:+27163278 | None:intergenic |
| GGAGTGTAGAGAGATTGGGG+TGG | 0.713691 | 4_4:+27163481 | None:intergenic |
| CAAACGCATTGATTAATGCG+CGG | 0.722511 | 4_4:-27159793 | Msa0676450:CDS |
| GGTGGTCGTAGAGAAACCGT+CGG | 0.726635 | 4_4:+27160909 | None:intergenic |
| TGGAATGAGAATGTGGACGA+CGG | 0.784154 | 4_4:+27163331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATTTAATTATTAAT+AGG | - | chr4_4:27161482-27161501 | Msa0676450:intron | 0.0% |
| !! | ATAAATATATTAAGAGAAAA+AGG | - | chr4_4:27160374-27160393 | Msa0676450:intron | 10.0% |
| !! | ACAATAGTATAATATATTAT+TGG | - | chr4_4:27160885-27160904 | Msa0676450:CDS | 10.0% |
| !! | CAATAGTATAATATATTATT+GGG | - | chr4_4:27160886-27160905 | Msa0676450:CDS | 10.0% |
| !! | ATCATTTAACAAATATTATT+TGG | - | chr4_4:27160951-27160970 | Msa0676450:CDS | 10.0% |
| !! | TAATTTAAATATGTTTATGA+TGG | + | chr4_4:27161120-27161139 | None:intergenic | 10.0% |
| !! | GATTATTAAAAAAGATAATT+TGG | + | chr4_4:27161451-27161470 | None:intergenic | 10.0% |
| !! | ATTTAATTATTAATAGGTAA+TGG | - | chr4_4:27161488-27161507 | Msa0676450:intron | 10.0% |
| !! | TAATATATATGTAATGAATA+TGG | + | chr4_4:27162306-27162325 | None:intergenic | 10.0% |
| !! | ATTATATACTAATTATTACA+TGG | + | chr4_4:27162575-27162594 | None:intergenic | 10.0% |
| !! | TTTAATAATACTATCTAGTT+TGG | + | chr4_4:27159830-27159849 | None:intergenic | 15.0% |
| !! | AAACTAGATAGTATTATTAA+AGG | - | chr4_4:27159829-27159848 | Msa0676450:intron | 15.0% |
| !!! | ACAAATTTTGTTTTTATATC+AGG | - | chr4_4:27160799-27160818 | Msa0676450:intron | 15.0% |
| !!! | TGATACAATACATTATATTT+TGG | - | chr4_4:27161208-27161227 | Msa0676450:intron | 15.0% |
| !! | TTAAAAAAGATAATTTGGAA+GGG | + | chr4_4:27161446-27161465 | None:intergenic | 15.0% |
| !! | ATTAAAAAAGATAATTTGGA+AGG | + | chr4_4:27161447-27161466 | None:intergenic | 15.0% |
| !! | AGTAAATTATATAGAAATGA+AGG | + | chr4_4:27163031-27163050 | None:intergenic | 15.0% |
| !!! | TGCTGTTTTTTTTTTTTTTT+TGG | - | chr4_4:27163401-27163420 | Msa0676450:CDS | 15.0% |
| !!! | GCTGTTTTTTTTTTTTTTTT+GGG | - | chr4_4:27163402-27163421 | Msa0676450:CDS | 15.0% |
| !! | ATTAAAGGTTAAATTGTAAG+TGG | - | chr4_4:27159844-27159863 | Msa0676450:intron | 20.0% |
| !! | TTAACCACTTATTATCAAAT+TGG | + | chr4_4:27159883-27159902 | None:intergenic | 20.0% |
| !!! | TTCATTAGTTTTTATCTCAT+TGG | + | chr4_4:27160189-27160208 | None:intergenic | 20.0% |
| !! | TATTAAGAGAAAAAGGTAAT+TGG | - | chr4_4:27160381-27160400 | Msa0676450:intron | 20.0% |
| !!! | TTTAGAATAACAATACCAAT+GGG | + | chr4_4:27160557-27160576 | None:intergenic | 20.0% |
| !!! | ATTTAGAATAACAATACCAA+TGG | + | chr4_4:27160558-27160577 | None:intergenic | 20.0% |
| !!! | ATTGGTATTGTTATTCTAAA+TGG | - | chr4_4:27160557-27160576 | Msa0676450:CDS | 20.0% |
| !!! | TGGAACTTTTGTTTTATAAT+AGG | - | chr4_4:27160847-27160866 | Msa0676450:CDS | 20.0% |
| !!! | TAAATATGTTTATGATGGAA+TGG | + | chr4_4:27161115-27161134 | None:intergenic | 20.0% |
| !!! | TTATTTTACTTTTTCATGCT+TGG | - | chr4_4:27161667-27161686 | Msa0676450:intron | 20.0% |
| !!! | TTTAAGATAATCTTCCTTTA+AGG | - | chr4_4:27162481-27162500 | Msa0676450:intron | 20.0% |
| !! | ATAGTTATTATGCATTATTG+AGG | + | chr4_4:27162809-27162828 | None:intergenic | 20.0% |
| ! | AATATATAGACCAATTTGAC+CGG | - | chr4_4:27159902-27159921 | Msa0676450:intron | 25.0% |
| ! | TATATGTTTGCTTCGTTAAT+AGG | - | chr4_4:27160039-27160058 | Msa0676450:intron | 25.0% |
| ! | AATCGACATTTAATACATGA+CGG | + | chr4_4:27160236-27160255 | None:intergenic | 25.0% |
| !! | TTCTTTATTTAGTTTCCCAT+AGG | - | chr4_4:27160451-27160470 | Msa0676450:intron | 25.0% |
| ! | TTAGAATAACAATACCAATG+GGG | + | chr4_4:27160556-27160575 | None:intergenic | 25.0% |
| !!! | GTAACAATGAAGTTTGTTAA+TGG | - | chr4_4:27160973-27160992 | Msa0676450:intron | 25.0% |
| ! | CTTATTGCTAAATTCTTCTT+CGG | - | chr4_4:27161591-27161610 | Msa0676450:intron | 25.0% |
| ! | TATTCACTTATACAGAGAAT+AGG | - | chr4_4:27161769-27161788 | Msa0676450:intron | 25.0% |
| ! | GAACTTCAAAACAAAAGAAT+TGG | - | chr4_4:27162024-27162043 | Msa0676450:intron | 25.0% |
| !! | TTTTCATGGTAACTAAAGAT+AGG | - | chr4_4:27162350-27162369 | Msa0676450:intron | 25.0% |
| ! | ATTTATGTTCTCCAATCAAT+TGG | + | chr4_4:27162444-27162463 | None:intergenic | 25.0% |
| ! | TTGTAGTATATTCATCAATG+AGG | - | chr4_4:27162602-27162621 | Msa0676450:intron | 25.0% |
| ! | GATTCATGTAACAAATAATG+AGG | + | chr4_4:27163073-27163092 | None:intergenic | 25.0% |
| ! | TATTGTGTCATGAAATCAAT+CGG | - | chr4_4:27163173-27163192 | Msa0676450:CDS | 25.0% |
| !!! | TTTTTTTTTTGGGATGATTG+TGG | - | chr4_4:27163412-27163431 | Msa0676450:CDS | 25.0% |
| ! | AAAGAAACAAAACGAAGAAA+AGG | + | chr4_4:27163530-27163549 | None:intergenic | 25.0% |
| AAAAATCAAGTGTGTTTCGA+TGG | - | chr4_4:27159426-27159445 | Msa0676450:intron | 30.0% | |
| ! | TTTCGATGGTTGCTTAATTT+TGG | - | chr4_4:27159440-27159459 | Msa0676450:intron | 30.0% |
| !! | TGATGATTTGTTTCTTGCTA+AGG | - | chr4_4:27159487-27159506 | Msa0676450:CDS | 30.0% |
| TCAATCATGTAGCACTATAT+TGG | + | chr4_4:27159592-27159611 | None:intergenic | 30.0% | |
| AAAGTTTACACATGAAAGCA+AGG | - | chr4_4:27159649-27159668 | Msa0676450:intron | 30.0% | |
| !! | TATTAGTGATTTTGAGAGTC+AGG | - | chr4_4:27159802-27159821 | Msa0676450:CDS | 30.0% |
| !! | ATTAGTGATTTTGAGAGTCA+GGG | - | chr4_4:27159803-27159822 | Msa0676450:CDS | 30.0% |
| ! | GAGACCAATTTGATAATAAG+TGG | - | chr4_4:27159876-27159895 | Msa0676450:intron | 30.0% |
| !!! | ACTTTTTTAACCGGTCAAAT+TGG | + | chr4_4:27159915-27159934 | None:intergenic | 30.0% |
| ATTTGACCGGTTAAAAAAGT+CGG | - | chr4_4:27159915-27159934 | Msa0676450:intron | 30.0% | |
| !!! | AATTAGTCCTTGGTTTTGTA+GGG | + | chr4_4:27159987-27160006 | None:intergenic | 30.0% |
| !!! | AAATTAGTCCTTGGTTTTGT+AGG | + | chr4_4:27159988-27160007 | None:intergenic | 30.0% |
| TACAAAACCAAGGACTAATT+TGG | - | chr4_4:27159987-27160006 | Msa0676450:intron | 30.0% | |
| AGCAAACATATAACTGATCT+AGG | + | chr4_4:27160031-27160050 | None:intergenic | 30.0% | |
| AATTAGACTTGTATTGCCAA+TGG | - | chr4_4:27160067-27160086 | Msa0676450:intron | 30.0% | |
| !! | TTAGTTTTTATCTCATTGGC+AGG | + | chr4_4:27160185-27160204 | None:intergenic | 30.0% |
| AATAAGATTCACTCCAACTA+AGG | + | chr4_4:27160480-27160499 | None:intergenic | 30.0% | |
| TAGATGGATAAAACATGGTT+GGG | - | chr4_4:27160713-27160732 | Msa0676450:CDS | 30.0% | |
| !! | TGAAGTTTGTTAATGGTTAC+AGG | - | chr4_4:27160980-27160999 | Msa0676450:intron | 30.0% |
| TTCAGAGTTTCTATCTAAAC+TGG | + | chr4_4:27161031-27161050 | None:intergenic | 30.0% | |
| ! | TACAATTTTCTAGATGCAAC+AGG | + | chr4_4:27161240-27161259 | None:intergenic | 30.0% |
| CATTCATTACAAATGGATGA+TGG | + | chr4_4:27161294-27161313 | None:intergenic | 30.0% | |
| AACGCAACATTCATTACAAA+TGG | + | chr4_4:27161301-27161320 | None:intergenic | 30.0% | |
| AAGCATAAAATCTGCTACAA+TGG | + | chr4_4:27161514-27161533 | None:intergenic | 30.0% | |
| !!! | TAACCTGAAAAGCATTTTCA+GGG | + | chr4_4:27161620-27161639 | None:intergenic | 30.0% |
| !!! | TTAACCTGAAAAGCATTTTC+AGG | + | chr4_4:27161621-27161640 | None:intergenic | 30.0% |
| !!! | AATGCTTTTCAGGTTAACAA+CGG | - | chr4_4:27161624-27161643 | Msa0676450:intron | 30.0% |
| TTTCATGCTTGGATAGATAT+TGG | - | chr4_4:27161678-27161697 | Msa0676450:intron | 30.0% | |
| CACCATAATGACATTGTTAA+GGG | + | chr4_4:27161994-27162013 | None:intergenic | 30.0% | |
| ACACCATAATGACATTGTTA+AGG | + | chr4_4:27161995-27162014 | None:intergenic | 30.0% | |
| ! | TCTATGCAACGTTTTTACAT+CGG | + | chr4_4:27162096-27162115 | None:intergenic | 30.0% |
| CATGTTCACAACTATATAGT+AGG | - | chr4_4:27162199-27162218 | Msa0676450:intron | 30.0% | |
| AACTATATAGTAGGACTGTA+GGG | - | chr4_4:27162208-27162227 | Msa0676450:intron | 30.0% | |
| ! | ATTAGACTAAGCAGTTTTCA+TGG | - | chr4_4:27162336-27162355 | Msa0676450:intron | 30.0% |
| TAGCTAATTTCCAAAGTAAG+CGG | + | chr4_4:27162386-27162405 | None:intergenic | 30.0% | |
| ! | AAGCATAAGCCTGAATTTTA+GGG | + | chr4_4:27162524-27162543 | None:intergenic | 30.0% |
| ! | TAAGCATAAGCCTGAATTTT+AGG | + | chr4_4:27162525-27162544 | None:intergenic | 30.0% |
| TAGCTGGAATTATTGAACAA+CGG | - | chr4_4:27162895-27162914 | Msa0676450:intron | 30.0% | |
| AATACAACACAGCAACATTA+TGG | + | chr4_4:27163235-27163254 | None:intergenic | 30.0% | |
| !! | GATGGTTGCTTAATTTTGGT+GGG | - | chr4_4:27159444-27159463 | Msa0676450:intron | 35.0% |
| TTTGACCGGTTAAAAAAGTC+GGG | - | chr4_4:27159916-27159935 | Msa0676450:intron | 35.0% | |
| !!! | AGATTCCCGACTTTTTTAAC+CGG | + | chr4_4:27159924-27159943 | None:intergenic | 35.0% |
| TGAACAACCAAATTAGTCCT+TGG | + | chr4_4:27159997-27160016 | None:intergenic | 35.0% | |
| CTCCTAGGTAAACTGAAATA+TGG | - | chr4_4:27160348-27160367 | Msa0676450:intron | 35.0% | |
| CACCATATTTCAGTTTACCT+AGG | + | chr4_4:27160353-27160372 | None:intergenic | 35.0% | |
| GTTGGAGTGAATCTTATTCA+AGG | - | chr4_4:27160482-27160501 | Msa0676450:intron | 35.0% | |
| ATAACAATACCAATGGGGTT+GGG | + | chr4_4:27160551-27160570 | None:intergenic | 35.0% | |
| AATAACAATACCAATGGGGT+TGG | + | chr4_4:27160552-27160571 | None:intergenic | 35.0% | |
| TAGCAACTCAGTTGTACTTA+CGG | + | chr4_4:27160604-27160623 | None:intergenic | 35.0% | |
| ! | TTCGTACTGGCAATTGAATT+TGG | - | chr4_4:27160657-27160676 | Msa0676450:intron | 35.0% |
| ! | TCGTACTGGCAATTGAATTT+GGG | - | chr4_4:27160658-27160677 | Msa0676450:intron | 35.0% |
| ! | CCATGTTTTATCCATCTACA+GGG | + | chr4_4:27160711-27160730 | None:intergenic | 35.0% |
| ! | ACCATGTTTTATCCATCTAC+AGG | + | chr4_4:27160712-27160731 | None:intergenic | 35.0% |
| GTAGATGGATAAAACATGGT+TGG | - | chr4_4:27160712-27160731 | Msa0676450:CDS | 35.0% | |
| CTAATCTCTGCTGAAGAATT+TGG | + | chr4_4:27160774-27160793 | None:intergenic | 35.0% | |
| ATTGGGTCTTGATTCTTGAA+CGG | - | chr4_4:27160903-27160922 | Msa0676450:CDS | 35.0% | |
| !! | GAAACTCTGAAGAAGTACTT+TGG | - | chr4_4:27161040-27161059 | Msa0676450:intron | 35.0% |
| ! | TTATGATGGAATGGAGTTGT+TGG | + | chr4_4:27161106-27161125 | None:intergenic | 35.0% |
| AGACTTCAGTTGCTAAAGAT+TGG | + | chr4_4:27161187-27161206 | None:intergenic | 35.0% | |
| !! | TGATTTTGTTTGTGCTGATG+TGG | - | chr4_4:27161378-27161397 | Msa0676450:intron | 35.0% |
| ! | TAGCAGATTTTATGCTTGTG+TGG | - | chr4_4:27161517-27161536 | Msa0676450:intron | 35.0% |
| TAACTTTGTCAACACTCAAC+AGG | - | chr4_4:27161726-27161745 | Msa0676450:intron | 35.0% | |
| TAATGACATTGTTAAGGGTC+TGG | + | chr4_4:27161989-27162008 | None:intergenic | 35.0% | |
| GACCCTTAACAATGTCATTA+TGG | - | chr4_4:27161989-27162008 | Msa0676450:intron | 35.0% | |
| !! | ACGTTTTTACATCGGTTGAA+AGG | + | chr4_4:27162088-27162107 | None:intergenic | 35.0% |
| GTGAACATGAGTGCAAAATA+TGG | + | chr4_4:27162188-27162207 | None:intergenic | 35.0% | |
| CAACTATATAGTAGGACTGT+AGG | - | chr4_4:27162207-27162226 | Msa0676450:intron | 35.0% | |
| ! | AGCATAAGCCTGAATTTTAG+GGG | + | chr4_4:27162523-27162542 | None:intergenic | 35.0% |
| ATTCAGGCTTATGCTTAACT+CGG | - | chr4_4:27162528-27162547 | Msa0676450:intron | 35.0% | |
| ! | TGATAAATCTTTTGCTGACG+AGG | - | chr4_4:27162696-27162715 | Msa0676450:intron | 35.0% |
| !! | CACTTAACATGAGCTTGTTT+TGG | + | chr4_4:27162941-27162960 | None:intergenic | 35.0% |
| ACATGAATCTTCGCATGAAT+AGG | - | chr4_4:27163084-27163103 | Msa0676450:CDS | 35.0% | |
| AACCTTAATCCCTTATCTTC+TGG | + | chr4_4:27163139-27163158 | None:intergenic | 35.0% | |
| TGGTGATAATTGAAGACTCT+TGG | + | chr4_4:27163301-27163320 | None:intergenic | 35.0% | |
| CAATAGAGAAGAGAAGAAAG+TGG | + | chr4_4:27163506-27163525 | None:intergenic | 35.0% | |
| ! | GAATGATGATGAAGAAGCCA+TGG | + | chr4_4:27159012-27159031 | None:intergenic | 40.0% |
| ! | TGAAGAAGAGTGGTGGTTTT+GGG | + | chr4_4:27159069-27159088 | None:intergenic | 40.0% |
| ! | TTGAAGAAGAGTGGTGGTTT+TGG | + | chr4_4:27159070-27159089 | None:intergenic | 40.0% |
| AGGTTGTTGGAATGAGAATG+TGG | + | chr4_4:27159137-27159156 | None:intergenic | 40.0% | |
| GATGCATAAATGGCGGTTAT+GGG | + | chr4_4:27159176-27159195 | None:intergenic | 40.0% | |
| TACGGAAGTAGGTAAGTCAT+TGG | - | chr4_4:27159322-27159341 | Msa0676450:exon | 40.0% | |
| AATCTCTTCACAATCGAACC+CGG | + | chr4_4:27159395-27159414 | None:intergenic | 40.0% | |
| ! | CGATGGTTGCTTAATTTTGG+TGG | - | chr4_4:27159443-27159462 | Msa0676450:intron | 40.0% |
| GTTTCTTGCTAAGGTTGCTA+TGG | - | chr4_4:27159496-27159515 | Msa0676450:CDS | 40.0% | |
| TGTGTCAGTAACTCGTTGTT+GGG | - | chr4_4:27159688-27159707 | Msa0676450:intron | 40.0% | |
| TATCATGAGTAGATGGAGAC+GGG | + | chr4_4:27160101-27160120 | None:intergenic | 40.0% | |
| CTATCATGAGTAGATGGAGA+CGG | + | chr4_4:27160102-27160121 | None:intergenic | 40.0% | |
| GCATGTCTATCATGAGTAGA+TGG | + | chr4_4:27160108-27160127 | None:intergenic | 40.0% | |
| ACCTAGGAGCTACACTAATT+GGG | + | chr4_4:27160337-27160356 | None:intergenic | 40.0% | |
| TACCTAGGAGCTACACTAAT+TGG | + | chr4_4:27160338-27160357 | None:intergenic | 40.0% | |
| TTCCCATAGGTTACCTTAGT+TGG | - | chr4_4:27160464-27160483 | Msa0676450:intron | 40.0% | |
| CTCCAACTAAGGTAACCTAT+GGG | + | chr4_4:27160469-27160488 | None:intergenic | 40.0% | |
| ACTCCAACTAAGGTAACCTA+TGG | + | chr4_4:27160470-27160489 | None:intergenic | 40.0% | |
| AGCAACTCAGTTGTACTTAC+GGG | + | chr4_4:27160603-27160622 | None:intergenic | 40.0% | |
| TCGATGGACATTTGATAAGC+TGG | - | chr4_4:27160626-27160645 | Msa0676450:intron | 40.0% | |
| CGATGGACATTTGATAAGCT+GGG | - | chr4_4:27160627-27160646 | Msa0676450:intron | 40.0% | |
| GATGGACATTTGATAAGCTG+GGG | - | chr4_4:27160628-27160647 | Msa0676450:intron | 40.0% | |
| GAATTTGGGTCCCTTGATTA+AGG | - | chr4_4:27160672-27160691 | Msa0676450:intron | 40.0% | |
| GAGTCCGATACCTTAATCAA+GGG | + | chr4_4:27160685-27160704 | None:intergenic | 40.0% | |
| TGAGTCCGATACCTTAATCA+AGG | + | chr4_4:27160686-27160705 | None:intergenic | 40.0% | |
| CCCTGTAGATGGATAAAACA+TGG | - | chr4_4:27160708-27160727 | Msa0676450:CDS | 40.0% | |
| ATGGATAAAACATGGTTGGG+AGG | - | chr4_4:27160716-27160735 | Msa0676450:intron | 40.0% | |
| TGGATAAAACATGGTTGGGA+GGG | - | chr4_4:27160717-27160736 | Msa0676450:intron | 40.0% | |
| GAAGAATTTGGATGGTCAGT+TGG | + | chr4_4:27160762-27160781 | None:intergenic | 40.0% | |
| TCTCTGCTGAAGAATTTGGA+TGG | + | chr4_4:27160770-27160789 | None:intergenic | 40.0% | |
| TTGGGTCTTGATTCTTGAAC+GGG | - | chr4_4:27160904-27160923 | Msa0676450:CDS | 40.0% | |
| AAGATTGGCATGTAGCTGAA+TGG | + | chr4_4:27161172-27161191 | None:intergenic | 40.0% | |
| GTTTACATTTCAGACTGCTG+CGG | - | chr4_4:27161318-27161337 | Msa0676450:intron | 40.0% | |
| !! | ACAGAGAATAGGTGCTATTG+TGG | - | chr4_4:27161780-27161799 | Msa0676450:intron | 40.0% |
| CATAATCATCTCTTCTGCAG+CGG | - | chr4_4:27161868-27161887 | Msa0676450:intron | 40.0% | |
| GAGCTAAGCTATTTGCAGTT+GGG | - | chr4_4:27161895-27161914 | Msa0676450:intron | 40.0% | |
| AACTGATAGAGAAAGCAACG+CGG | + | chr4_4:27162134-27162153 | None:intergenic | 40.0% | |
| CAAAGCAACAAAAAGCGACA+AGG | + | chr4_4:27162252-27162271 | None:intergenic | 40.0% | |
| !!! | CTTGTCGCTTTTTGTTGCTT+TGG | - | chr4_4:27162250-27162269 | Msa0676450:intron | 40.0% |
| AACATTGTCACCGCTTACTT+TGG | - | chr4_4:27162373-27162392 | Msa0676450:intron | 40.0% | |
| ATTGGATTCCAGCACTCATA+GGG | + | chr4_4:27162426-27162445 | None:intergenic | 40.0% | |
| AATTGGATTCCAGCACTCAT+AGG | + | chr4_4:27162427-27162446 | None:intergenic | 40.0% | |
| ! | AGTGCTGGAATCCAATTGAT+TGG | - | chr4_4:27162430-27162449 | Msa0676450:intron | 40.0% |
| CAAGCATCACTTGACCTTAA+AGG | + | chr4_4:27162498-27162517 | None:intergenic | 40.0% | |
| TGCTTGTTCCCCTAAAATTC+AGG | - | chr4_4:27162512-27162531 | Msa0676450:intron | 40.0% | |
| TTCAGGCTTATGCTTAACTC+GGG | - | chr4_4:27162529-27162548 | Msa0676450:intron | 40.0% | |
| !! | CATGACTTGCCTTTTCAGAT+TGG | - | chr4_4:27162631-27162650 | Msa0676450:intron | 40.0% |
| ! | TTGCCTTTTCAGATTGGTAC+TGG | - | chr4_4:27162637-27162656 | Msa0676450:intron | 40.0% |
| ACACCAGTACCAATCTGAAA+AGG | + | chr4_4:27162643-27162662 | None:intergenic | 40.0% | |
| !! | CAAACGCATTGATTAATGCG+CGG | - | chr4_4:27162665-27162684 | Msa0676450:intron | 40.0% |
| !! | GCAACACTCGTTGATAATAC+CGG | + | chr4_4:27162733-27162752 | None:intergenic | 40.0% |
| ! | TTATCAACGAGTGTTGCCTA+TGG | - | chr4_4:27162736-27162755 | Msa0676450:intron | 40.0% |
| ! | TATCAACGAGTGTTGCCTAT+GGG | - | chr4_4:27162737-27162756 | Msa0676450:intron | 40.0% |
| TGGCAGTATCTAGCAACTTA+AGG | - | chr4_4:27162767-27162786 | Msa0676450:intron | 40.0% | |
| AATTGTCTCTGATCTCTACC+AGG | - | chr4_4:27162862-27162881 | Msa0676450:intron | 40.0% | |
| ACCAGGTATCAAATTCTAGC+TGG | - | chr4_4:27162879-27162898 | Msa0676450:intron | 40.0% | |
| TCCAGCTAGAATTTGATACC+TGG | + | chr4_4:27162883-27162902 | None:intergenic | 40.0% | |
| !! | ATCTGCTTTGCTGTTAGAAC+CGG | - | chr4_4:27162963-27162982 | Msa0676450:CDS | 40.0% |
| TAGAACCGGAAACACTTTCT+TGG | - | chr4_4:27162977-27162996 | Msa0676450:CDS | 40.0% | |
| AGAACCGGAAACACTTTCTT+GGG | - | chr4_4:27162978-27162997 | Msa0676450:CDS | 40.0% | |
| TGAATCTTCGCATGAATAGG+TGG | - | chr4_4:27163087-27163106 | Msa0676450:CDS | 40.0% | |
| GAATCTTCGCATGAATAGGT+GGG | - | chr4_4:27163088-27163107 | Msa0676450:CDS | 40.0% | |
| GTCCAGAAGATAAGGGATTA+AGG | - | chr4_4:27163134-27163153 | Msa0676450:CDS | 40.0% | |
| GATGGAGTGTAGAGAGATTG+GGG | + | chr4_4:27158983-27159002 | None:intergenic | 45.0% | |
| GGATGGAGTGTAGAGAGATT+GGG | + | chr4_4:27158984-27159003 | None:intergenic | 45.0% | |
| TGGAGAGAGAGAAAGAACGA+GGG | + | chr4_4:27159046-27159065 | None:intergenic | 45.0% | |
| TGGAATGAGAATGTGGACGA+CGG | + | chr4_4:27159130-27159149 | None:intergenic | 45.0% | |
| GGATGCATAAATGGCGGTTA+TGG | + | chr4_4:27159177-27159196 | None:intergenic | 45.0% | |
| ! | GTTGGTGGATGCATAAATGG+CGG | + | chr4_4:27159183-27159202 | None:intergenic | 45.0% |
| GCCATTTATGCATCCACCAA+CGG | - | chr4_4:27159182-27159201 | Msa0676450:three_prime_UTR | 45.0% | |
| ! | ACCGTTGGTGGATGCATAAA+TGG | + | chr4_4:27159186-27159205 | None:intergenic | 45.0% |
| ATTTATGCATCCACCAACGG+TGG | - | chr4_4:27159185-27159204 | Msa0676450:three_prime_UTR | 45.0% | |
| !! | AAACAGAGAAGAAGCGTTGC+TGG | - | chr4_4:27159295-27159314 | Msa0676450:three_prime_UTR | 45.0% |
| !! | AGAAGCGTTGCTGGTACTTA+CGG | - | chr4_4:27159304-27159323 | Msa0676450:three_prime_UTR | 45.0% |
| TTGCTGGTACTTACGGAAGT+AGG | - | chr4_4:27159311-27159330 | Msa0676450:exon | 45.0% | |
| GTCATTGGAGAATTTGCCAG+CGG | - | chr4_4:27159337-27159356 | Msa0676450:CDS | 45.0% | |
| GCTAAGGTTGCTATGGAATG+CGG | - | chr4_4:27159503-27159522 | Msa0676450:CDS | 45.0% | |
| !! | CGGTGTTGGCATCTTTACAA+AGG | - | chr4_4:27159523-27159542 | Msa0676450:CDS | 45.0% |
| ACACATGAAAGCAAGGCAAG+CGG | - | chr4_4:27159656-27159675 | Msa0676450:intron | 45.0% | |
| CTGTGTCAGTAACTCGTTGT+TGG | - | chr4_4:27159687-27159706 | Msa0676450:intron | 45.0% | |
| TGCCTAATTCTGACAGCAGA+AGG | - | chr4_4:27160125-27160144 | Msa0676450:intron | 45.0% | |
| CTCCTTCTGCTGTCAGAATT+AGG | + | chr4_4:27160130-27160149 | None:intergenic | 45.0% | |
| CTAATTCTGACAGCAGAAGG+AGG | - | chr4_4:27160128-27160147 | Msa0676450:intron | 45.0% | |
| TCCCAATTAGTGTAGCTCCT+AGG | - | chr4_4:27160333-27160352 | Msa0676450:intron | 45.0% | |
| CATTTGATAAGCTGGGGTGT+TGG | - | chr4_4:27160634-27160653 | Msa0676450:intron | 45.0% | |
| GGGTCCCTTGATTAAGGTAT+CGG | - | chr4_4:27160678-27160697 | Msa0676450:intron | 45.0% | |
| GGATAAAACATGGTTGGGAG+GGG | - | chr4_4:27160718-27160737 | Msa0676450:intron | 45.0% | |
| TGGGTCTTGATTCTTGAACG+GGG | - | chr4_4:27160905-27160924 | Msa0676450:CDS | 45.0% | |
| GATTCTTGAACGGGGAACAT+AGG | - | chr4_4:27160913-27160932 | Msa0676450:CDS | 45.0% | |
| GGGGAACATAGGATGGTAAA+GGG | - | chr4_4:27160924-27160943 | Msa0676450:CDS | 45.0% | |
| ! | AGCAATAAGTCCAGCACTGA+CGG | + | chr4_4:27161580-27161599 | None:intergenic | 45.0% |
| ! | CTGCCCTGAAAATGCTTTTC+AGG | - | chr4_4:27161614-27161633 | Msa0676450:intron | 45.0% |
| CTTTGTCAACACTCAACAGG+TGG | - | chr4_4:27161729-27161748 | Msa0676450:intron | 45.0% | |
| GGAGCTAAGCTATTTGCAGT+TGG | - | chr4_4:27161894-27161913 | Msa0676450:intron | 45.0% | |
| AAGCTATTTGCAGTTGGGAC+TGG | - | chr4_4:27161900-27161919 | Msa0676450:intron | 45.0% | |
| ACTCATAGGGAAGTAGAGAG+AGG | + | chr4_4:27162413-27162432 | None:intergenic | 45.0% | |
| TATGCTTAACTCGGGTGTCT+TGG | - | chr4_4:27162537-27162556 | Msa0676450:intron | 45.0% | |
| ! | ATCAACGAGTGTTGCCTATG+GGG | - | chr4_4:27162738-27162757 | Msa0676450:intron | 45.0% |
| TGTTGCCTATGGGGTTTACA+TGG | - | chr4_4:27162747-27162766 | Msa0676450:intron | 45.0% | |
| TACTGCCATGTAAACCCCAT+AGG | + | chr4_4:27162755-27162774 | None:intergenic | 45.0% | |
| !!! | AGCTTGTTTTGGTGCAGCAA+AGG | + | chr4_4:27162930-27162949 | None:intergenic | 45.0% |
| GGTTGGAGTCCAGAAGATAA+GGG | - | chr4_4:27163127-27163146 | Msa0676450:CDS | 45.0% | |
| ATCTTTAACCTTCGCTGGAG+TGG | + | chr4_4:27163334-27163353 | None:intergenic | 45.0% | |
| GATGGATCTTTAACCTTCGC+TGG | + | chr4_4:27163339-27163358 | None:intergenic | 45.0% | |
| !! | TTATTGAAAATATATATAAT+TGG | - | chr4_4:27160827-27160846 | Msa0676450:intron | 5.0% |
| !! | ATAAACATATTTAAATTATA+AGG | - | chr4_4:27161122-27161141 | Msa0676450:CDS | 5.0% |
| GGGATGGAGTGTAGAGAGAT+TGG | + | chr4_4:27158985-27159004 | None:intergenic | 50.0% | |
| TCTCTCTACACTCCATCCCA+TGG | - | chr4_4:27158986-27159005 | Msa0676450:three_prime_UTR | 50.0% | |
| GATGAAGAAGCCATGGCCAT+GGG | + | chr4_4:27159005-27159024 | None:intergenic | 50.0% | |
| TGATGAAGAAGCCATGGCCA+TGG | + | chr4_4:27159006-27159025 | None:intergenic | 50.0% | |
| AGAGAAAGAACGAGGGTGGA+TGG | + | chr4_4:27159039-27159058 | None:intergenic | 50.0% | |
| AGAGAGAGAAAGAACGAGGG+TGG | + | chr4_4:27159043-27159062 | None:intergenic | 50.0% | |
| GTGGAGAGAGAGAAAGAACG+AGG | + | chr4_4:27159047-27159066 | None:intergenic | 50.0% | |
| !!! | AGAAGAGTGGTGGTTTTGGG+TGG | + | chr4_4:27159066-27159085 | None:intergenic | 50.0% |
| GAGAGGTTGAAGAAGAGTGG+TGG | + | chr4_4:27159076-27159095 | None:intergenic | 50.0% | |
| GGAGAGAGGTTGAAGAAGAG+TGG | + | chr4_4:27159079-27159098 | None:intergenic | 50.0% | |
| TGATGGAGAGAGATGGGAGT+GGG | + | chr4_4:27159100-27159119 | None:intergenic | 50.0% | |
| ! | ATGATGGAGAGAGATGGGAG+TGG | + | chr4_4:27159101-27159120 | None:intergenic | 50.0% |
| !! | GGGAGATGATGGAGAGAGAT+GGG | + | chr4_4:27159106-27159125 | None:intergenic | 50.0% |
| AATGAGAATGTGGACGACGG+CGG | + | chr4_4:27159127-27159146 | None:intergenic | 50.0% | |
| AAATGGCGGTTATGGGAGGA+CGG | + | chr4_4:27159169-27159188 | None:intergenic | 50.0% | |
| GCATAAATGGCGGTTATGGG+AGG | + | chr4_4:27159173-27159192 | None:intergenic | 50.0% | |
| ATTGGAGAATCAGGTGGCAG+TGG | - | chr4_4:27159215-27159234 | Msa0676450:three_prime_UTR | 50.0% | |
| ! | TGGCGATGATGGTGAATCAG+AGG | - | chr4_4:27159262-27159281 | Msa0676450:three_prime_UTR | 50.0% |
| TTTAGCCGAAGCGGTGAAAG+CGG | - | chr4_4:27159361-27159380 | Msa0676450:intron | 50.0% | |
| GTTGCTATGGAATGCGGTGT+TGG | - | chr4_4:27159509-27159528 | Msa0676450:CDS | 50.0% | |
| CACATGAAAGCAAGGCAAGC+GGG | - | chr4_4:27159657-27159676 | Msa0676450:intron | 50.0% | |
| TTTGCTAGACCCAACCCCAT+TGG | - | chr4_4:27160539-27160558 | Msa0676450:intron | 50.0% | |
| CAACTGAGTTGCTAGCTCGA+TGG | - | chr4_4:27160610-27160629 | Msa0676450:intron | 50.0% | |
| TCGGACTCAAACCCTGTAGA+TGG | - | chr4_4:27160697-27160716 | Msa0676450:CDS | 50.0% | |
| AGGGGAGACTCTACTAAAGG+TGG | - | chr4_4:27160736-27160755 | Msa0676450:intron | 50.0% | |
| CTTGAACGGGGAACATAGGA+TGG | - | chr4_4:27160917-27160936 | Msa0676450:CDS | 50.0% | |
| CGGGGAACATAGGATGGTAA+AGG | - | chr4_4:27160923-27160942 | Msa0676450:CDS | 50.0% | |
| ATTTCAGACTGCTGCGGAGT+TGG | - | chr4_4:27161324-27161343 | Msa0676450:intron | 50.0% | |
| !! | ATAAGTCCAGCACTGACGGA+AGG | + | chr4_4:27161576-27161595 | None:intergenic | 50.0% |
| CAACACTCAACAGGTGGCTT+TGG | - | chr4_4:27161735-27161754 | Msa0676450:intron | 50.0% | |
| TCATCTCTTCTGCAGCGGAA+CGG | - | chr4_4:27161873-27161892 | Msa0676450:intron | 50.0% | |
| CTCTACTTCCCTATGAGTGC+TGG | - | chr4_4:27162415-27162434 | Msa0676450:intron | 50.0% | |
| !! | CGCATTGATTAATGCGCGGA+AGG | - | chr4_4:27162669-27162688 | Msa0676450:intron | 50.0% |
| ! | ATCTTTTGCTGACGAGGCAG+AGG | - | chr4_4:27162702-27162721 | Msa0676450:intron | 50.0% |
| !! | CGAGCCCAAGAAAGTGTTTC+CGG | + | chr4_4:27162985-27163004 | None:intergenic | 50.0% |
| TCTTCGCATGAATAGGTGGG+TGG | - | chr4_4:27163091-27163110 | Msa0676450:CDS | 50.0% | |
| GGGTTGGAGTCCAGAAGATA+AGG | - | chr4_4:27163126-27163145 | Msa0676450:CDS | 50.0% | |
| GATCCATCGACATAGCTAGC+AGG | - | chr4_4:27163351-27163370 | Msa0676450:CDS | 50.0% | |
| AGTCCTGCTAGCTATGTCGA+TGG | + | chr4_4:27163357-27163376 | None:intergenic | 50.0% | |
| GACTTCCTCTCCACTCCACA+CGG | - | chr4_4:27158949-27158968 | Msa0676450:three_prime_UTR | 55.0% | |
| GGAGTGTAGAGAGATTGGGG+TGG | + | chr4_4:27158980-27158999 | None:intergenic | 55.0% | |
| TACACTCCATCCCATGGCCA+TGG | - | chr4_4:27158992-27159011 | Msa0676450:three_prime_UTR | 55.0% | |
| AAGAAGCCATGGCCATGGGA+TGG | + | chr4_4:27159001-27159020 | None:intergenic | 55.0% | |
| GAAAGAACGAGGGTGGATGG+TGG | + | chr4_4:27159036-27159055 | None:intergenic | 55.0% | |
| !! | CGGGAGATGATGGAGAGAGA+TGG | + | chr4_4:27159107-27159126 | None:intergenic | 55.0% |
| ATGAGAATGTGGACGACGGC+GGG | + | chr4_4:27159126-27159145 | None:intergenic | 55.0% | |
| ACGGGGAGTGAAGAGGTTGT+TGG | + | chr4_4:27159150-27159169 | None:intergenic | 55.0% | |
| AATGGCGGTTATGGGAGGAC+GGG | + | chr4_4:27159168-27159187 | None:intergenic | 55.0% | |
| TATGCATCCACCAACGGTGG+CGG | - | chr4_4:27159188-27159207 | Msa0676450:three_prime_UTR | 55.0% | |
| GGCGGAATTGGAGAATCAGG+TGG | - | chr4_4:27159209-27159228 | Msa0676450:three_prime_UTR | 55.0% | |
| GAATCAGGTGGCAGTGGAAG+CGG | - | chr4_4:27159221-27159240 | Msa0676450:three_prime_UTR | 55.0% | |
| TTAGCCGAAGCGGTGAAAGC+GGG | - | chr4_4:27159362-27159381 | Msa0676450:intron | 55.0% | |
| !! | GAGAGCGCCCTACAAAACCA+AGG | - | chr4_4:27159977-27159996 | Msa0676450:intron | 55.0% |
| GGGAGGGGAGACTCTACTAA+AGG | - | chr4_4:27160733-27160752 | Msa0676450:intron | 55.0% | |
| GGTGGTCGTAGAGAAACCGT+CGG | + | chr4_4:27161552-27161571 | None:intergenic | 55.0% | |
| !! | ACTCAACAGGTGGCTTTGGC+TGG | - | chr4_4:27161739-27161758 | Msa0676450:intron | 55.0% |
| ! | AGTTGGGACTGGTGCATCAC+TGG | - | chr4_4:27161911-27161930 | Msa0676450:intron | 55.0% |
| ! | TGACGAGGCAGAGGAAGTAC+CGG | - | chr4_4:27162711-27162730 | Msa0676450:intron | 55.0% |
| !! | GTGGGTGGATTATGCTCGCT+GGG | - | chr4_4:27163106-27163125 | Msa0676450:CDS | 55.0% |
| ! | GTGGATTATGCTCGCTGGGT+TGG | - | chr4_4:27163110-27163129 | Msa0676450:CDS | 55.0% |
| CATAGTGTCCACTCCAGCGA+AGG | - | chr4_4:27163323-27163342 | Msa0676450:CDS | 55.0% | |
| TCCTCTCCACTCCACACGGT+CGG | - | chr4_4:27158953-27158972 | Msa0676450:three_prime_UTR | 60.0% | |
| GAGAGATGGGAGTGGGAGAG+AGG | + | chr4_4:27159093-27159112 | None:intergenic | 60.0% | |
| ATGGCGGTTATGGGAGGACG+GGG | + | chr4_4:27159167-27159186 | None:intergenic | 60.0% | |
| GGCGGCGGAATTGGAGAATC+AGG | - | chr4_4:27159206-27159225 | Msa0676450:three_prime_UTR | 60.0% | |
| !! | GGTGATGGTGGTGGCGATGA+TGG | - | chr4_4:27159251-27159270 | Msa0676450:three_prime_UTR | 60.0% |
| ! | GCCAGCGGATTTAGCCGAAG+CGG | - | chr4_4:27159352-27159371 | Msa0676450:CDS | 60.0% |
| ACCGCTTCGGCTAAATCCGC+TGG | + | chr4_4:27159356-27159375 | None:intergenic | 60.0% | |
| TCGTCCCGCTTTCACCGCTT+CGG | + | chr4_4:27159369-27159388 | None:intergenic | 60.0% | |
| GGTGAAAGCGGGACGAGTTC+CGG | - | chr4_4:27159373-27159392 | Msa0676450:intron | 60.0% | |
| GTGAAAGCGGGACGAGTTCC+GGG | - | chr4_4:27159374-27159393 | Msa0676450:intron | 60.0% | |
| GAGACGGGCGTATGAGCCAT+TGG | + | chr4_4:27160086-27160105 | None:intergenic | 60.0% | |
| !! | GCTGGGGTGTTGGTTCGTAC+TGG | - | chr4_4:27160644-27160663 | Msa0676450:intron | 60.0% |
| TGTGTGGCTTCCTGCTCCGA+CGG | - | chr4_4:27161533-27161552 | Msa0676450:intron | 60.0% | |
| CGTAGAGAAACCGTCGGAGC+AGG | + | chr4_4:27161546-27161565 | None:intergenic | 60.0% | |
| !! | AGTCCAGCACTGACGGAAGG+TGG | + | chr4_4:27161573-27161592 | None:intergenic | 60.0% |
| !! | GGTGGGTGGATTATGCTCGC+TGG | - | chr4_4:27163105-27163124 | Msa0676450:CDS | 60.0% |
| GCTGGAGTGGACACTATGCG+TGG | + | chr4_4:27163321-27163340 | None:intergenic | 60.0% | |
| ACCGACCGTGTGGAGTGGAG+AGG | + | chr4_4:27158957-27158976 | None:intergenic | 65.0% | |
| ATTGGGGTGGACCGACCGTG+TGG | + | chr4_4:27158967-27158986 | None:intergenic | 65.0% | |
| TGGACGACGGCGGGAGATGA+TGG | + | chr4_4:27159117-27159136 | None:intergenic | 65.0% | |
| TGGGAGGACGGGGAGTGAAG+AGG | + | chr4_4:27159157-27159176 | None:intergenic | 65.0% | |
| AATTCCGCCGCCACCGTTGG+TGG | + | chr4_4:27159198-27159217 | None:intergenic | 65.0% | |
| ! | ACCAACGGTGGCGGCGGAAT+TGG | - | chr4_4:27159197-27159216 | Msa0676450:three_prime_UTR | 65.0% |
| TCCAATTCCGCCGCCACCGT+TGG | + | chr4_4:27159201-27159220 | None:intergenic | 65.0% | |
| TCAGGTGGCAGTGGAAGCGG+TGG | - | chr4_4:27159224-27159243 | Msa0676450:three_prime_UTR | 65.0% | |
| GGAAGCGGTGGAGGAGGTGA+TGG | - | chr4_4:27159236-27159255 | Msa0676450:three_prime_UTR | 65.0% | |
| ! | AGCGGTGGAGGAGGTGATGG+TGG | - | chr4_4:27159239-27159258 | Msa0676450:three_prime_UTR | 65.0% |
| !! | GGTGGAGGAGGTGATGGTGG+TGG | - | chr4_4:27159242-27159261 | Msa0676450:three_prime_UTR | 65.0% |
| !! | CCAGCACTGACGGAAGGTGG+TGG | + | chr4_4:27161570-27161589 | None:intergenic | 65.0% |
| CCACCACCTTCCGTCAGTGC+TGG | - | chr4_4:27161567-27161586 | Msa0676450:intron | 65.0% | |
| GGTGGACCGACCGTGTGGAG+TGG | + | chr4_4:27158962-27158981 | None:intergenic | 70.0% | |
| ! | GCATCCACCAACGGTGGCGG+CGG | - | chr4_4:27159191-27159210 | Msa0676450:three_prime_UTR | 70.0% |
| GGTGGCAGTGGAAGCGGTGG+AGG | - | chr4_4:27159227-27159246 | Msa0676450:three_prime_UTR | 70.0% | |
| GGCAGTGGAAGCGGTGGAGG+AGG | - | chr4_4:27159230-27159249 | Msa0676450:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 27158891 | 27163589 | 27158891 | ID=Msa0676450;Name=Msa0676450 |
| chr4_4 | mRNA | 27158891 | 27163589 | 27158891 | ID=Msa0676450-mRNA-1;Parent=Msa0676450;Name=Msa0676450-mRNA-1;_AED=0.07;_eAED=0.07;_QI=114|1|1|1|1|1|8|435|384 |
| chr4_4 | exon | 27158891 | 27159374 | 27158891 | ID=Msa0676450-mRNA-1:exon:7187;Parent=Msa0676450-mRNA-1 |
| chr4_4 | exon | 27159471 | 27159596 | 27159471 | ID=Msa0676450-mRNA-1:exon:7186;Parent=Msa0676450-mRNA-1 |
| chr4_4 | exon | 27159692 | 27159831 | 27159692 | ID=Msa0676450-mRNA-1:exon:7185;Parent=Msa0676450-mRNA-1 |
| chr4_4 | exon | 27160548 | 27160592 | 27160548 | ID=Msa0676450-mRNA-1:exon:7184;Parent=Msa0676450-mRNA-1 |
| chr4_4 | exon | 27160679 | 27160732 | 27160679 | ID=Msa0676450-mRNA-1:exon:7183;Parent=Msa0676450-mRNA-1 |
| chr4_4 | exon | 27160845 | 27160976 | 27160845 | ID=Msa0676450-mRNA-1:exon:7182;Parent=Msa0676450-mRNA-1 |
| chr4_4 | exon | 27161081 | 27161149 | 27161081 | ID=Msa0676450-mRNA-1:exon:7181;Parent=Msa0676450-mRNA-1 |
| chr4_4 | exon | 27162936 | 27163589 | 27162936 | ID=Msa0676450-mRNA-1:exon:7180;Parent=Msa0676450-mRNA-1 |
| chr4_4 | five_prime_UTR | 27163476 | 27163589 | 27163476 | ID=Msa0676450-mRNA-1:five_prime_utr;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27162936 | 27163475 | 27162936 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27161081 | 27161149 | 27161081 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27160845 | 27160976 | 27160845 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27160679 | 27160732 | 27160679 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27160548 | 27160592 | 27160548 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27159692 | 27159831 | 27159692 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27159471 | 27159596 | 27159471 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | CDS | 27159326 | 27159374 | 27159326 | ID=Msa0676450-mRNA-1:cds;Parent=Msa0676450-mRNA-1 |
| chr4_4 | three_prime_UTR | 27158891 | 27159325 | 27158891 | ID=Msa0676450-mRNA-1:three_prime_utr;Parent=Msa0676450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
