AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0475430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475430 MtrunA17_Chr3g0132621 98.261 230 1 1 1 227 193 422 2.60e-157 442
Msa0475430 MtrunA17_Chr0c02g0489751 54.185 227 100 2 1 224 200 425 3.61e-76 236
Msa0475430 MtrunA17_Chr5g0441721 51.101 227 106 3 1 224 204 428 7.75e-70 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475430 AT4G24460.4 64.935 231 76 3 1 227 74 303 2.52e-84 253
Msa0475430 AT4G24460.2 64.935 231 76 3 1 227 202 431 8.09e-83 253
Msa0475430 AT4G24460.1 64.935 231 76 3 1 227 202 431 8.09e-83 253
Msa0475430 AT5G12170.2 50.218 229 110 2 2 227 216 443 4.87e-69 218
Msa0475430 AT5G19380.1 51.316 228 106 3 1 225 213 438 7.66e-65 207
Msa0475430 AT5G19380.2 51.316 228 106 3 1 225 273 498 2.44e-64 207
Msa0475430 AT4G24460.3 68.085 94 30 0 1 94 202 295 3.75e-27 106
Msa0475430 AT5G12170.3 49.462 93 47 0 2 94 216 308 2.30e-25 101

Find 70 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGTATTATTTATTTCT+TGG 0.188554 3_3:-78614621 None:intergenic
TGATTCTTCCACTCGATTAA+AGG 0.194465 3_3:+78611668 Msa0475430:CDS
CCTTTCAAGTTCGAGATTAA+AGG 0.220084 3_3:-78613070 None:intergenic
ATATTTGTGGTCAATTCTTT+TGG 0.244958 3_3:+78611832 Msa0475430:CDS
CCTAATTTGTTTGTTTCTTA+AGG 0.245903 3_3:+78614570 Msa0475430:three_prime_UTR
TAGAAACAGACGAATGTTAT+TGG 0.270530 3_3:+78614514 Msa0475430:three_prime_UTR
CCTTAAGAAACAAACAAATT+AGG 0.283394 3_3:-78614570 None:intergenic
GAAAGAACATAAACAGAAAT+TGG 0.285954 3_3:-78614179 None:intergenic
CTAGTAAACACCCAACAATT+TGG 0.286774 3_3:-78610419 None:intergenic
GGATATGTTGAATGCCAAAT+TGG 0.318336 3_3:-78613957 None:intergenic
GCTCTACGTAGTTACCAATT+TGG 0.341292 3_3:+78613943 Msa0475430:CDS
TCTCTCATGTTAATGTTGTC+AGG 0.366358 3_3:+78614019 Msa0475430:CDS
CTCAATGTTGTTCCTCCCTC+TGG 0.372128 3_3:-78614221 None:intergenic
AATAAATAGCTGCTGTGTTT+CGG 0.374482 3_3:-78614537 None:intergenic
GGTTGTGCAATTCTTGTATG+TGG 0.381956 3_3:+78614260 Msa0475430:CDS
GTTCCTCCCTCTGGAAGATA+TGG 0.395626 3_3:-78614212 None:intergenic
TACTCAATTAACCAAATTGT+TGG 0.413438 3_3:+78610408 Msa0475430:CDS
TTTCTTGTGCCTTTCAAGCC+GGG 0.416884 3_3:+78611534 Msa0475430:CDS
GTTTCTATATATTATTCGTA+TGG 0.423546 3_3:-78614498 None:intergenic
GTTTCTTGTGCCTTTCAAGC+CGG 0.433816 3_3:+78611533 Msa0475430:CDS
TATGAAGGTAGTTGAACAAA+TGG 0.440286 3_3:-78613097 None:intergenic
TTGAGCCCATTCTTTCTGCT+TGG 0.441026 3_3:+78614239 Msa0475430:CDS
AGAAATAAATAATACTTGAA+TGG 0.468095 3_3:+78614624 Msa0475430:three_prime_UTR
TATTGAAGCCCCGGCTTGAA+AGG 0.470016 3_3:-78611543 None:intergenic
TACGTAGAGCAGCGGAAGCA+AGG 0.473417 3_3:-78613930 None:intergenic
ACTCAATTAACCAAATTGTT+GGG 0.477654 3_3:+78610409 Msa0475430:CDS
TGCTTTCTAAACATTGGAGC+TGG 0.479516 3_3:+78613139 Msa0475430:CDS
GCACAACCAAGCAGAAAGAA+TGG 0.481261 3_3:-78614245 None:intergenic
GTAACTACAAAATACTTGAA+TGG 0.482500 3_3:+78614592 Msa0475430:three_prime_UTR
AGCCGGGGCTTCAATAATCA+AGG 0.484105 3_3:+78611550 Msa0475430:CDS
TCATATCTTAAAAGTGGTGC+TGG 0.489401 3_3:+78613115 Msa0475430:CDS
TTTCTATATATTATTCGTAT+GGG 0.494241 3_3:-78614497 None:intergenic
AGCAAGCCATACCTGAAATC+CGG 0.494536 3_3:-78611857 None:intergenic
GTTGTGCAATTCTTGTATGT+GGG 0.502963 3_3:+78614261 Msa0475430:CDS
AACCTTGATTATTGAAGCCC+CGG 0.504691 3_3:-78611552 None:intergenic
GCTGGTTGCTTTCTAAACAT+TGG 0.506289 3_3:+78613133 Msa0475430:CDS
CCTTTAATCTCGAACTTGAA+AGG 0.507439 3_3:+78613070 Msa0475430:CDS
TAGAGCACCAACTGCCAAGC+TGG 0.508641 3_3:-78614377 None:intergenic
CCGCTCTTATCCTGAGGAGA+AGG 0.510554 3_3:+78610385 Msa0475430:CDS
TGAACTATTCCTAGCAGGTC+GGG 0.512908 3_3:-78614303 None:intergenic
TAATTGAGTACCTTCTCCTC+AGG 0.515619 3_3:-78610395 None:intergenic
GGGTGTTTACTAGTAGCTGC+TGG 0.518256 3_3:+78610429 Msa0475430:CDS
CTACCTTCATATCTTAAAAG+TGG 0.521293 3_3:+78613109 Msa0475430:CDS
TTCCATGTCTCAGGTTGTGA+TGG 0.521911 3_3:+78613902 Msa0475430:intron
CCCTCTGGAAGATATGGTAA+TGG 0.526764 3_3:-78614206 None:intergenic
ACGTAGAGCAGCGGAAGCAA+GGG 0.527253 3_3:-78613929 None:intergenic
CACAACCAAGCAGAAAGAAT+GGG 0.531963 3_3:-78614244 None:intergenic
CAAGAAACTATCATCAATGC+TGG 0.545221 3_3:-78611518 None:intergenic
AATTGCAGTGGCTCTAATGC+AGG 0.547753 3_3:+78611464 Msa0475430:intron
CTGAACTATTCCTAGCAGGT+CGG 0.555048 3_3:-78614304 None:intergenic
AAAGTCGTTGGATATATTTG+TGG 0.558378 3_3:+78611819 Msa0475430:CDS
TTGTGTGCAGCAAAAGTCGT+TGG 0.560938 3_3:+78611807 Msa0475430:intron
ACTTCTGAACTATTCCTAGC+AGG 0.562912 3_3:-78614308 None:intergenic
GGCAGTTGGTGCTCTAACCA+TGG 0.564831 3_3:+78614384 Msa0475430:three_prime_UTR
CTGGAAGATATGGTAATGGA+AGG 0.565937 3_3:-78614202 None:intergenic
ACAACACAACCCGACCTGCT+AGG 0.576941 3_3:+78614294 Msa0475430:CDS
AAAGCATACCTTTAATCGAG+TGG 0.578667 3_3:-78611676 None:intergenic
AATGATCTGATGGCAAAATG+AGG 0.581582 3_3:-78614422 None:intergenic
CTGAGGAGAAAATACCAGCT+TGG 0.587012 3_3:+78614363 Msa0475430:three_prime_UTR
GTGTTGTGATTGCTATCTCA+AGG 0.596579 3_3:+78610451 Msa0475430:CDS
TTCTTGTGCCTTTCAAGCCG+GGG 0.607320 3_3:+78611535 Msa0475430:CDS
CCATTACCATATCTTCCAGA+GGG 0.609985 3_3:+78614206 Msa0475430:CDS
GAAAATACCAGCTTGGCAGT+TGG 0.613549 3_3:+78614370 Msa0475430:three_prime_UTR
TGGAAGATATGGTAATGGAA+GGG 0.620700 3_3:-78614201 None:intergenic
TCCATTACCATATCTTCCAG+AGG 0.626250 3_3:+78614205 Msa0475430:CDS
TCTCTAAAGTTGATTTCGTG+TGG 0.626579 3_3:+78611495 Msa0475430:CDS
TATTTGTGTAACCAATGCTG+AGG 0.665590 3_3:+78614346 Msa0475430:three_prime_UTR
TTGGTAACTACGTAGAGCAG+CGG 0.681363 3_3:-78613938 None:intergenic
TTACCATATCTTCCAGAGGG+AGG 0.686655 3_3:+78614209 Msa0475430:CDS
CCTTCTCCTCAGGATAAGAG+CGG 0.688063 3_3:-78610385 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTCCTTAAAATTA+AGG + chr3_3:78610608-78610627 Msa0475430:intron 10.0%
!! TATAAACTAAAAAATTACTT+TGG - chr3_3:78611985-78612004 None:intergenic 10.0%
!! ATATTAAATTAAAAATTGTG+AGG + chr3_3:78612989-78613008 Msa0475430:intron 10.0%
!!! TTTATCTTTTTAATTGGAAA+GGG - chr3_3:78610702-78610721 None:intergenic 15.0%
!!! TTTTATCTTTTTAATTGGAA+AGG - chr3_3:78610703-78610722 None:intergenic 15.0%
!!! TAGCATTTTATCTTTTTAAT+TGG - chr3_3:78610708-78610727 None:intergenic 15.0%
!!! AATTAATGCATTTTTATGAA+CGG + chr3_3:78611628-78611647 Msa0475430:intron 15.0%
!!! TTTTTTTTAATGTTAGTGTT+AGG + chr3_3:78612176-78612195 Msa0475430:intron 15.0%
!! TTATTTACTTTCGTATATAA+TGG + chr3_3:78612527-78612546 Msa0475430:intron 15.0%
!!! ACATTTTGAGTTTATTATTT+CGG + chr3_3:78612960-78612979 Msa0475430:intron 15.0%
!! TTTCTATTTAATATCCTATT+TGG - chr3_3:78613738-78613757 None:intergenic 15.0%
!! AAGAAAAGCTAATTAATAAT+TGG - chr3_3:78613846-78613865 None:intergenic 15.0%
!! TTTCTATATATTATTCGTAT+GGG - chr3_3:78614500-78614519 None:intergenic 15.0%
!!! TTCAAGTATTATTTATTTCT+TGG - chr3_3:78614624-78614643 None:intergenic 15.0%
!! AGAAATAAATAATACTTGAA+TGG + chr3_3:78614624-78614643 Msa0475430:three_prime_UTR 15.0%
!!! ATGGATTAAATACATTTTTT+TGG + chr3_3:78614643-78614662 Msa0475430:three_prime_UTR 15.0%
!!! TTTTCTATCCCTATATATAA+GGG - chr3_3:78611224-78611243 None:intergenic 20.0%
!!! TTTAGTTAAACTTGTTTGTT+AGG + chr3_3:78611596-78611615 Msa0475430:intron 20.0%
!!! TTAGTTAAACTTGTTTGTTA+GGG + chr3_3:78611597-78611616 Msa0475430:intron 20.0%
!!! AATTTACAATTTTCAAAAGG+TGG - chr3_3:78611951-78611970 None:intergenic 20.0%
!!! CGTAATTTACAATTTTCAAA+AGG - chr3_3:78611954-78611973 None:intergenic 20.0%
!!! GCTTGTAAATTTTTTATGAA+AGG - chr3_3:78612458-78612477 None:intergenic 20.0%
!! ATTTGCTCATAATAACTAAT+TGG - chr3_3:78613280-78613299 None:intergenic 20.0%
!!! TTGTAATTTGTAACACATTA+AGG - chr3_3:78613320-78613339 None:intergenic 20.0%
!!! TGAAACTTTTCACAAAAAAA+TGG - chr3_3:78613797-78613816 None:intergenic 20.0%
!! GTTTCTATATATTATTCGTA+TGG - chr3_3:78614501-78614520 None:intergenic 20.0%
! TACTCAATTAACCAAATTGT+TGG + chr3_3:78610408-78610427 Msa0475430:CDS 25.0%
! ACTCAATTAACCAAATTGTT+GGG + chr3_3:78610409-78610428 Msa0475430:CDS 25.0%
!!! GGTAGTTTAACTTTTTTATC+TGG + chr3_3:78610472-78610491 Msa0475430:intron 25.0%
!! TGAATTGCTTACTTTCTTTT+GGG + chr3_3:78610576-78610595 Msa0475430:intron 25.0%
! GATTTCAAATCAAACCAAAA+CGG + chr3_3:78610844-78610863 Msa0475430:intron 25.0%
! AATGTTTAACCGCAATAAAA+AGG + chr3_3:78611009-78611028 Msa0475430:intron 25.0%
!! CTTTTATGACTTCTGTTTAA+CGG - chr3_3:78611124-78611143 None:intergenic 25.0%
! TCAAGAAACCCTTATATATA+GGG + chr3_3:78611213-78611232 Msa0475430:intron 25.0%
!! GTTTTCTATCCCTATATATA+AGG - chr3_3:78611225-78611244 None:intergenic 25.0%
!! AGGATAGTTTTCATATTACT+TGG - chr3_3:78611297-78611316 None:intergenic 25.0%
!!! TTCTAATTTTGGAGTATCTT+AGG - chr3_3:78611329-78611348 None:intergenic 25.0%
!!! CTAGGATTAGTTTCTAATTT+TGG - chr3_3:78611340-78611359 None:intergenic 25.0%
! CACAATGTATAAAAATGTCT+CGG - chr3_3:78611399-78611418 None:intergenic 25.0%
! TAGGAAACAAATTATCAGAT+AGG - chr3_3:78611443-78611462 None:intergenic 25.0%
!! TGCTTTCTTTTACTCTTTTT+TGG + chr3_3:78611693-78611712 Msa0475430:intron 25.0%
!!! TTTCTTTTACTCTTTTTTGG+TGG + chr3_3:78611696-78611715 Msa0475430:intron 25.0%
!! ATATTTGTGGTCAATTCTTT+TGG + chr3_3:78611832-78611851 Msa0475430:CDS 25.0%
! TCTTGTGAGTTCAAATAATA+TGG + chr3_3:78612038-78612057 Msa0475430:intron 25.0%
!!! TTAGCATTTGCTATTTGTAA+CGG - chr3_3:78612114-78612133 None:intergenic 25.0%
!!! TATTTTAGGTCAGGTATATA+TGG - chr3_3:78612218-78612237 None:intergenic 25.0%
!! TGACTGGATACATATATTTT+AGG - chr3_3:78612232-78612251 None:intergenic 25.0%
! ACGTGATATAAAATATTGAC+TGG - chr3_3:78612248-78612267 None:intergenic 25.0%
! ATGCATATTTAGCTAATATG+TGG - chr3_3:78612273-78612292 None:intergenic 25.0%
! TAAATTTATAGGGTTTGGAT+GGG - chr3_3:78612307-78612326 None:intergenic 25.0%
! TTACCTAAATTTATAGGGTT+TGG - chr3_3:78612312-78612331 None:intergenic 25.0%
! CTCAGTTACCTAAATTTATA+GGG - chr3_3:78612317-78612336 None:intergenic 25.0%
!!! CTGAATTTACTATTGACTTA+TGG + chr3_3:78612407-78612426 Msa0475430:intron 25.0%
! AGTAAATAATTGCAACTTGA+TGG - chr3_3:78612516-78612535 None:intergenic 25.0%
! CATTAGATGAATACACATAA+AGG - chr3_3:78612569-78612588 None:intergenic 25.0%
! ATTCATCTAATGTCTAATTC+TGG + chr3_3:78612577-78612596 Msa0475430:intron 25.0%
! TTCATCTAATGTCTAATTCT+GGG + chr3_3:78612578-78612597 Msa0475430:intron 25.0%
!!! TCAAGATCAATTCTTTGTTT+TGG - chr3_3:78612662-78612681 None:intergenic 25.0%
!!! TTTTTTCTCTCTCTTTGTAA+TGG + chr3_3:78612736-78612755 Msa0475430:intron 25.0%
! TAATTGAATACAACTCATGT+GGG + chr3_3:78612859-78612878 Msa0475430:intron 25.0%
! AATAAACTCAAAATGTCAAG+AGG - chr3_3:78612956-78612975 None:intergenic 25.0%
! AAAATTGTGAGGCATATTTA+TGG + chr3_3:78613000-78613019 Msa0475430:intron 25.0%
! GTAAGAGCAAAAGAATTAAA+AGG - chr3_3:78613244-78613263 None:intergenic 25.0%
! TTTCACAAAAAAATGGAGAA+AGG - chr3_3:78613790-78613809 None:intergenic 25.0%
! ACAGGTTCAAAATTATTATG+GGG - chr3_3:78613869-78613888 None:intergenic 25.0%
! GACAGGTTCAAAATTATTAT+GGG - chr3_3:78613870-78613889 None:intergenic 25.0%
! TGACAGGTTCAAAATTATTA+TGG - chr3_3:78613871-78613890 None:intergenic 25.0%
! GAAAGAACATAAACAGAAAT+TGG - chr3_3:78614182-78614201 None:intergenic 25.0%
!! AAACATTTTCAATGATCTGA+TGG - chr3_3:78614435-78614454 None:intergenic 25.0%
! CCTTAAGAAACAAACAAATT+AGG - chr3_3:78614573-78614592 None:intergenic 25.0%
!!! CCTAATTTGTTTGTTTCTTA+AGG + chr3_3:78614570-78614589 Msa0475430:three_prime_UTR 25.0%
! GTAACTACAAAATACTTGAA+TGG + chr3_3:78614592-78614611 Msa0475430:three_prime_UTR 25.0%
AAAGTAAGCAATTCACACAT+AGG - chr3_3:78610571-78610590 None:intergenic 30.0%
! GTGAATTGCTTACTTTCTTT+TGG + chr3_3:78610575-78610594 Msa0475430:intron 30.0%
! CTTGTGTGACCTTAATTTTA+AGG - chr3_3:78610620-78610639 None:intergenic 30.0%
!! ATCTTTTTAATTGGAAAGGG+AGG - chr3_3:78610699-78610718 None:intergenic 30.0%
!! GACATCTTCCAGTTTATTTT+AGG - chr3_3:78610822-78610841 None:intergenic 30.0%
AATCAAACCAAAACGGATAT+TGG + chr3_3:78610851-78610870 Msa0475430:intron 30.0%
! TTTCGAGGTTTTACAAGTTA+GGG - chr3_3:78610900-78610919 None:intergenic 30.0%
! TAGCTTCTTCCTTTTTATTG+CGG - chr3_3:78611021-78611040 None:intergenic 30.0%
GTCAAGAAACCCTTATATAT+AGG + chr3_3:78611212-78611231 Msa0475430:intron 30.0%
!!! TTCCCTGTTTATTTTGGATT+GGG - chr3_3:78611249-78611268 None:intergenic 30.0%
!!! TTTCCCTGTTTATTTTGGAT+TGG - chr3_3:78611250-78611269 None:intergenic 30.0%
! CTTGATTTCCCTGTTTATTT+TGG - chr3_3:78611255-78611274 None:intergenic 30.0%
AGTATCTTAGGTTATCTCTT+AGG - chr3_3:78611317-78611336 None:intergenic 30.0%
! AGTATCTTTGTTTGTCTTCT+AGG - chr3_3:78611358-78611377 None:intergenic 30.0%
! CGAGACATTTTTATACATTG+TGG + chr3_3:78611397-78611416 Msa0475430:intron 30.0%
TTTGTTTCCTATAATTGCAG+TGG + chr3_3:78611452-78611471 Msa0475430:intron 30.0%
!!! TTTTACTCTTTTTTGGTGGA+AGG + chr3_3:78611700-78611719 Msa0475430:intron 30.0%
!!! TTTACTCTTTTTTGGTGGAA+GGG + chr3_3:78611701-78611720 Msa0475430:intron 30.0%
! TTCCATTGGCATATTTTTCA+TGG + chr3_3:78611758-78611777 Msa0475430:intron 30.0%
! TCCATTGGCATATTTTTCAT+GGG + chr3_3:78611759-78611778 Msa0475430:intron 30.0%
AAAGTCGTTGGATATATTTG+TGG + chr3_3:78611819-78611838 Msa0475430:CDS 30.0%
GTAATAACGTGAATTGCAAA+TGG + chr3_3:78611880-78611899 Msa0475430:intron 30.0%
TTTGAACTCACAAGATAAAG+CGG - chr3_3:78612033-78612052 None:intergenic 30.0%
! GGATTTTGAGCTTATCTAAA+AGG - chr3_3:78612075-78612094 None:intergenic 30.0%
!! TAGCATTTGCTATTTGTAAC+GGG - chr3_3:78612113-78612132 None:intergenic 30.0%
AAATAGCAAATGCTAACTGT+TGG + chr3_3:78612118-78612137 Msa0475430:intron 30.0%
!! GGATACATATATTTTAGGTC+AGG - chr3_3:78612227-78612246 None:intergenic 30.0%
CTAAATTTATAGGGTTTGGA+TGG - chr3_3:78612308-78612327 None:intergenic 30.0%
CATCCAAACCCTATAAATTT+AGG + chr3_3:78612306-78612325 Msa0475430:intron 30.0%
GCTCAGTTACCTAAATTTAT+AGG - chr3_3:78612318-78612337 None:intergenic 30.0%
! AAATTTTCTCTGTATCCCAA+GGG + chr3_3:78612356-78612375 Msa0475430:intron 30.0%
! CGTATATAATGGAATAGACT+TGG + chr3_3:78612538-78612557 Msa0475430:intron 30.0%
GTCAGGAAAATAGAAGAAAA+AGG - chr3_3:78612619-78612638 None:intergenic 30.0%
! TCTTCTATTTTCCTGACATT+AGG + chr3_3:78612622-78612641 Msa0475430:intron 30.0%
AGTAGACTACTTTCACTTAT+GGG + chr3_3:78612791-78612810 Msa0475430:intron 30.0%
GTAATTGAATACAACTCATG+TGG + chr3_3:78612858-78612877 Msa0475430:intron 30.0%
TATGAAGGTAGTTGAACAAA+TGG - chr3_3:78613100-78613119 None:intergenic 30.0%
CTACCTTCATATCTTAAAAG+TGG + chr3_3:78613109-78613128 Msa0475430:CDS 30.0%
AAATGTAGACAATAACAGGA+AGG - chr3_3:78613221-78613240 None:intergenic 30.0%
AAGGAAATGTAGACAATAAC+AGG - chr3_3:78613225-78613244 None:intergenic 30.0%
ACAATCCAATTGCAAGATAT+TGG + chr3_3:78613336-78613355 Msa0475430:intron 30.0%
!! TGATCATATACTTTTGCTGT+GGG - chr3_3:78613370-78613389 None:intergenic 30.0%
! ATGATCATATACTTTTGCTG+TGG - chr3_3:78613371-78613390 None:intergenic 30.0%
! ACAGCAAAAGTATATGATCA+TGG + chr3_3:78613370-78613389 Msa0475430:intron 30.0%
TTAGTAGTGTGATTCTCATA+AGG + chr3_3:78613417-78613436 Msa0475430:intron 30.0%
TAGTAGTGTGATTCTCATAA+GGG + chr3_3:78613418-78613437 Msa0475430:intron 30.0%
AGGGCTTATATCAATTAGTA+TGG + chr3_3:78613437-78613456 Msa0475430:intron 30.0%
GGGCTTATATCAATTAGTAT+GGG + chr3_3:78613438-78613457 Msa0475430:intron 30.0%
! TATACCTTATCTGAAGTACT+AGG + chr3_3:78613651-78613670 Msa0475430:intron 30.0%
!! TGGAAATGAATGTTTTTGAC+AGG - chr3_3:78613887-78613906 None:intergenic 30.0%
!! ACTTTTTAGTACGTTAAGCA+GGG - chr3_3:78613981-78614000 None:intergenic 30.0%
!! AACTTTTTAGTACGTTAAGC+AGG - chr3_3:78613982-78614001 None:intergenic 30.0%
GGAGAAAAAATATTTCTCCA+TGG - chr3_3:78614404-78614423 None:intergenic 30.0%
TAGAAACAGACGAATGTTAT+TGG + chr3_3:78614514-78614533 Msa0475430:three_prime_UTR 30.0%
AATAAATAGCTGCTGTGTTT+CGG - chr3_3:78614540-78614559 None:intergenic 30.0%
CTAGTAAACACCCAACAATT+TGG - chr3_3:78610422-78610441 None:intergenic 35.0%
TCAGCACGGGAAATTAAATA+TGG - chr3_3:78610527-78610546 None:intergenic 35.0%
CATAGGTAGTCAAATTGGTT+AGG - chr3_3:78610554-78610573 None:intergenic 35.0%
TCACACATAGGTAGTCAAAT+TGG - chr3_3:78610559-78610578 None:intergenic 35.0%
GATTGATCGGTGAACTTTAA+GGG - chr3_3:78610734-78610753 None:intergenic 35.0%
TGATTGATCGGTGAACTTTA+AGG - chr3_3:78610735-78610754 None:intergenic 35.0%
! GTTTCGAGGTTTTACAAGTT+AGG - chr3_3:78610901-78610920 None:intergenic 35.0%
! ATTGTTTCAGTTTGGTTTCG+AGG - chr3_3:78610915-78610934 None:intergenic 35.0%
GGCTCAATATTGTTTCAGTT+TGG - chr3_3:78610923-78610942 None:intergenic 35.0%
TTGCGGTTAAACATTTCTCA+TGG - chr3_3:78611004-78611023 None:intergenic 35.0%
ACCAAAGATTAACCATCAAG+AGG + chr3_3:78611040-78611059 Msa0475430:intron 35.0%
! TCCTCTTGATGGTTAATCTT+TGG - chr3_3:78611044-78611063 None:intergenic 35.0%
! CTTTTATCTCATCCTCTTGA+TGG - chr3_3:78611055-78611074 None:intergenic 35.0%
! TTTTACCATGTGCCTTTGAT+AGG - chr3_3:78611163-78611182 None:intergenic 35.0%
ACTCCCAATCCAAAATAAAC+AGG + chr3_3:78611243-78611262 Msa0475430:intron 35.0%
CTCCCAATCCAAAATAAACA+GGG + chr3_3:78611244-78611263 Msa0475430:intron 35.0%
TGGCACATGTTAAATGAAGT+GGG + chr3_3:78611417-78611436 Msa0475430:intron 35.0%
ATTAGAGCCACTGCAATTAT+AGG - chr3_3:78611462-78611481 None:intergenic 35.0%
!! TCTCTAAAGTTGATTTCGTG+TGG + chr3_3:78611495-78611514 Msa0475430:CDS 35.0%
CAAGAAACTATCATCAATGC+TGG - chr3_3:78611521-78611540 None:intergenic 35.0%
! AATGCATTTTTATGAACGGC+AGG + chr3_3:78611632-78611651 Msa0475430:intron 35.0%
TGATTCTTCCACTCGATTAA+AGG + chr3_3:78611668-78611687 Msa0475430:CDS 35.0%
AAAGCATACCTTTAATCGAG+TGG - chr3_3:78611679-78611698 None:intergenic 35.0%
!!! TTACTCTTTTTTGGTGGAAG+GGG + chr3_3:78611702-78611721 Msa0475430:intron 35.0%
! TAAGGTCACTTTCTCAAATG+TGG + chr3_3:78611727-78611746 Msa0475430:intron 35.0%
! AAGGTCACTTTCTCAAATGT+GGG + chr3_3:78611728-78611747 Msa0475430:intron 35.0%
!! CAATTTTCAAAAGGTGGACT+CGG - chr3_3:78611945-78611964 None:intergenic 35.0%
AACGGGACAAACAAAAGTAA+TGG - chr3_3:78612096-78612115 None:intergenic 35.0%
! GAAATTTTCTCTGTATCCCA+AGG + chr3_3:78612355-78612374 Msa0475430:intron 35.0%
! AATTTTCTCTGTATCCCAAG+GGG + chr3_3:78612357-78612376 Msa0475430:intron 35.0%
TCAGTAAAATTTCTCCCCTT+GGG - chr3_3:78612374-78612393 None:intergenic 35.0%
ATCAGTAAAATTTCTCCCCT+TGG - chr3_3:78612375-78612394 None:intergenic 35.0%
TTACATTCCCAATGCTAACA+AGG + chr3_3:78612478-78612497 Msa0475430:intron 35.0%
GAAGAAAAAGGCAAGTAAAG+TGG - chr3_3:78612607-78612626 None:intergenic 35.0%
! TTTTCCTGACATTAGGTGTA+TGG + chr3_3:78612629-78612648 Msa0475430:intron 35.0%
TAAGTGAAAGTAGTCTACTC+TGG - chr3_3:78612790-78612809 None:intergenic 35.0%
GAGTAGACTACTTTCACTTA+TGG + chr3_3:78612790-78612809 Msa0475430:intron 35.0%
TGGGTCATAGTAAATCATGT+GGG + chr3_3:78612878-78612897 Msa0475430:intron 35.0%
! TGTGGGTCTCATTTTCTTTT+TGG + chr3_3:78612895-78612914 Msa0475430:intron 35.0%
! TGCCTTTTGATGTGTATTGT+AGG + chr3_3:78613024-78613043 Msa0475430:intron 35.0%
AGCCTACAATACACATCAAA+AGG - chr3_3:78613029-78613048 None:intergenic 35.0%
!! CCTTTCAAGTTCGAGATTAA+AGG - chr3_3:78613073-78613092 None:intergenic 35.0%
CCTTTAATCTCGAACTTGAA+AGG + chr3_3:78613070-78613089 Msa0475430:CDS 35.0%
!!! GCACCACTTTTAAGATATGA+AGG - chr3_3:78613115-78613134 None:intergenic 35.0%
TCATATCTTAAAAGTGGTGC+TGG + chr3_3:78613115-78613134 Msa0475430:CDS 35.0%
CATGTCCAATATCTTGCAAT+TGG - chr3_3:78613344-78613363 None:intergenic 35.0%
CTAAATCTAGCTACTGTTGT+GGG - chr3_3:78613401-78613420 None:intergenic 35.0%
ACTAAATCTAGCTACTGTTG+TGG - chr3_3:78613402-78613421 None:intergenic 35.0%
ATACAAAACCTGTAGGAACA+TGG - chr3_3:78613473-78613492 None:intergenic 35.0%
GAACTGATGCTATTGCATAT+CGG + chr3_3:78613521-78613540 Msa0475430:intron 35.0%
AACTGATGCTATTGCATATC+GGG + chr3_3:78613522-78613541 Msa0475430:intron 35.0%
ACTGATGGTTTATATGTTCC+TGG + chr3_3:78613574-78613593 Msa0475430:intron 35.0%
CTGATGGTTTATATGTTCCT+GGG + chr3_3:78613575-78613594 Msa0475430:intron 35.0%
TCTTCCTAGTACTTCAGATA+AGG - chr3_3:78613658-78613677 None:intergenic 35.0%
TGTACACCCATTCTTATGTT+TGG - chr3_3:78613713-78613732 None:intergenic 35.0%
AATGGGTGTACAATCCAAAT+AGG + chr3_3:78613721-78613740 Msa0475430:intron 35.0%
AACATTCATTTCCATGTCTC+AGG + chr3_3:78613893-78613912 Msa0475430:intron 35.0%
GGATATGTTGAATGCCAAAT+TGG - chr3_3:78613960-78613979 None:intergenic 35.0%
TCTCTCATGTTAATGTTGTC+AGG + chr3_3:78614019-78614038 Msa0475430:CDS 35.0%
!! TTTTAGCTAATGCGTGCTTA+TGG + chr3_3:78614145-78614164 Msa0475430:intron 35.0%
!! TGGAAGATATGGTAATGGAA+GGG - chr3_3:78614204-78614223 None:intergenic 35.0%
GTTGTGCAATTCTTGTATGT+GGG + chr3_3:78614261-78614280 Msa0475430:CDS 35.0%
TATTTGTGTAACCAATGCTG+AGG + chr3_3:78614346-78614365 Msa0475430:three_prime_UTR 35.0%
AATGATCTGATGGCAAAATG+AGG - chr3_3:78614425-78614444 None:intergenic 35.0%
TAATTGAGTACCTTCTCCTC+AGG - chr3_3:78610398-78610417 None:intergenic 40.0%
GTGTTGTGATTGCTATCTCA+AGG + chr3_3:78610451-78610470 Msa0475430:CDS 40.0%
ATTGGTTAGGAATCTCAGCA+CGG - chr3_3:78610541-78610560 None:intergenic 40.0%
AGTGAATGAGCATTTGTGAG+TGG + chr3_3:78610647-78610666 Msa0475430:intron 40.0%
ATGTTGTTCGTGAGAGTCAA+CGG - chr3_3:78610758-78610777 None:intergenic 40.0%
AGCTGAGGCCTAAAATAAAC+TGG + chr3_3:78610811-78610830 Msa0475430:intron 40.0%
! CGTTAGTCCAATATCCGTTT+TGG - chr3_3:78610861-78610880 None:intergenic 40.0%
AACTGAAGCCCCAATTAGAA+AGG + chr3_3:78610963-78610982 Msa0475430:intron 40.0%
ACTGAAGCCCCAATTAGAAA+GGG + chr3_3:78610964-78610983 Msa0475430:intron 40.0%
TTCTCATGGATTTGAAGACG+CGG - chr3_3:78610990-78611009 None:intergenic 40.0%
CAATTTCCTCTTGTCTTTCG+TGG - chr3_3:78611089-78611108 None:intergenic 40.0%
GTGGCACATGTTAAATGAAG+TGG + chr3_3:78611416-78611435 Msa0475430:intron 40.0%
AACCTTGATTATTGAAGCCC+CGG - chr3_3:78611555-78611574 None:intergenic 40.0%
!! TTTTTGGTGGAAGGGGTTTA+AGG + chr3_3:78611709-78611728 Msa0475430:intron 40.0%
! ATGTGGGCTAAAGTTTCCAT+TGG + chr3_3:78611744-78611763 Msa0475430:intron 40.0%
GCCCATGAAAAATATGCCAA+TGG - chr3_3:78611763-78611782 None:intergenic 40.0%
! GTGGTCAATTCTTTTGGATC+CGG + chr3_3:78611838-78611857 Msa0475430:CDS 40.0%
! TTCTTTTGGATCCGGATTTC+AGG + chr3_3:78611846-78611865 Msa0475430:CDS 40.0%
GTGCTTGGATTGTTAGTGTT+AGG + chr3_3:78612142-78612161 Msa0475430:intron 40.0%
TAGTCCATACACCTAATGTC+AGG - chr3_3:78612636-78612655 None:intergenic 40.0%
GTGGGTCATAGTAAATCATG+TGG + chr3_3:78612877-78612896 Msa0475430:intron 40.0%
! GCTGGTTGCTTTCTAAACAT+TGG + chr3_3:78613133-78613152 Msa0475430:CDS 40.0%
TGCTTTCTAAACATTGGAGC+TGG + chr3_3:78613139-78613158 Msa0475430:CDS 40.0%
AACATTGGAGCTGGTAAAAC+AGG + chr3_3:78613148-78613167 Msa0475430:intron 40.0%
ACAATAACAGGAAGGCAAGT+AGG - chr3_3:78613213-78613232 None:intergenic 40.0%
!! GTTCCTACAGGTTTTGTATG+TGG + chr3_3:78613474-78613493 Msa0475430:intron 40.0%
TCACCACATACAAAACCTGT+AGG - chr3_3:78613480-78613499 None:intergenic 40.0%
ACTGATGCTATTGCATATCG+GGG + chr3_3:78613523-78613542 Msa0475430:intron 40.0%
GCAACGTCTTAAAAAATCCC+AGG - chr3_3:78613595-78613614 None:intergenic 40.0%
GCTGTGTTATGATTCACTCA+AGG + chr3_3:78613613-78613632 Msa0475430:intron 40.0%
AAGCCAGCCAAACATAAGAA+TGG + chr3_3:78613703-78613722 Msa0475430:intron 40.0%
AGCCAGCCAAACATAAGAAT+GGG + chr3_3:78613704-78613723 Msa0475430:intron 40.0%
GCTCTACGTAGTTACCAATT+TGG + chr3_3:78613943-78613962 Msa0475430:CDS 40.0%
!! CTGGAAGATATGGTAATGGA+AGG - chr3_3:78614205-78614224 None:intergenic 40.0%
TCCATTACCATATCTTCCAG+AGG + chr3_3:78614205-78614224 Msa0475430:CDS 40.0%
CCATTACCATATCTTCCAGA+GGG + chr3_3:78614206-78614225 Msa0475430:CDS 40.0%
CACAACCAAGCAGAAAGAAT+GGG - chr3_3:78614247-78614266 None:intergenic 40.0%
GGTTGTGCAATTCTTGTATG+TGG + chr3_3:78614260-78614279 Msa0475430:CDS 40.0%
ACTTCTGAACTATTCCTAGC+AGG - chr3_3:78614311-78614330 None:intergenic 40.0%
! TGGTATTTTCTCCTCAGCAT+TGG - chr3_3:78614360-78614379 None:intergenic 40.0%
! TGTTTTCCGCTCTTATCCTG+AGG + chr3_3:78610379-78610398 Msa0475430:CDS 45.0%
TTGGTTAGGAATCTCAGCAC+GGG - chr3_3:78610540-78610559 None:intergenic 45.0%
GAGAGTCAACGGTGATTGAT+CGG - chr3_3:78610747-78610766 None:intergenic 45.0%
! TGGCGCTAGCTTATTCACTT+TGG - chr3_3:78610786-78610805 None:intergenic 45.0%
! TTTTAGGCCTCAGCTACTGT+TGG - chr3_3:78610806-78610825 None:intergenic 45.0%
ATTGGGGCTTCAGTTGTAGT+TGG - chr3_3:78610958-78610977 None:intergenic 45.0%
CCTCTTGTCTTTCGTGGTTA+AGG - chr3_3:78611083-78611102 None:intergenic 45.0%
CCTTAACCACGAAAGACAAG+AGG + chr3_3:78611080-78611099 Msa0475430:intron 45.0%
ACCATGTGCCTTTGATAGGT+GGG - chr3_3:78611159-78611178 None:intergenic 45.0%
TACCATGTGCCTTTGATAGG+TGG - chr3_3:78611160-78611179 None:intergenic 45.0%
!! AATTGCAGTGGCTCTAATGC+AGG + chr3_3:78611464-78611483 Msa0475430:intron 45.0%
GTTTCTTGTGCCTTTCAAGC+CGG + chr3_3:78611533-78611552 Msa0475430:CDS 45.0%
TTTCTTGTGCCTTTCAAGCC+GGG + chr3_3:78611534-78611553 Msa0475430:CDS 45.0%
TTGTGTGCAGCAAAAGTCGT+TGG + chr3_3:78611807-78611826 Msa0475430:intron 45.0%
! TTGGATCCGGATTTCAGGTA+TGG + chr3_3:78611851-78611870 Msa0475430:intron 45.0%
AGCAAGCCATACCTGAAATC+CGG - chr3_3:78611860-78611879 None:intergenic 45.0%
! ATGCTAACTGTTGGAGTGCT+TGG + chr3_3:78612127-78612146 Msa0475430:intron 45.0%
AGGGTTTGGATGGGAAAAGA+GGG - chr3_3:78612298-78612317 None:intergenic 45.0%
TAGGGTTTGGATGGGAAAAG+AGG - chr3_3:78612299-78612318 None:intergenic 45.0%
! GATGGTGCCTTGTTAGCATT+GGG - chr3_3:78612488-78612507 None:intergenic 45.0%
! CAATGCTAACAAGGCACCAT+CGG + chr3_3:78612487-78612506 Msa0475430:intron 45.0%
! TGCAACTTGATGGTAACCGA+TGG - chr3_3:78612506-78612525 None:intergenic 45.0%
ATCTAGCTACTGTTGTGGGA+GGG - chr3_3:78613397-78613416 None:intergenic 45.0%
AATCTAGCTACTGTTGTGGG+AGG - chr3_3:78613398-78613417 None:intergenic 45.0%
CAAAACCTGTAGGAACATGG+TGG - chr3_3:78613470-78613489 None:intergenic 45.0%
! TGTCCTGTGGCAGAAGTATA+GGG + chr3_3:78613550-78613569 Msa0475430:intron 45.0%
GCTTCTCATCTGAGGACTAA+GGG - chr3_3:78613687-78613706 None:intergenic 45.0%
CACCCATTCTTATGTTTGGC+TGG - chr3_3:78613709-78613728 None:intergenic 45.0%
! TTCCATGTCTCAGGTTGTGA+TGG + chr3_3:78613902-78613921 Msa0475430:intron 45.0%
! TTGGTAACTACGTAGAGCAG+CGG - chr3_3:78613941-78613960 None:intergenic 45.0%
! CCCTCTGGAAGATATGGTAA+TGG - chr3_3:78614209-78614228 None:intergenic 45.0%
TTACCATATCTTCCAGAGGG+AGG + chr3_3:78614209-78614228 Msa0475430:CDS 45.0%
TTGAGCCCATTCTTTCTGCT+TGG + chr3_3:78614239-78614258 Msa0475430:CDS 45.0%
GCACAACCAAGCAGAAAGAA+TGG - chr3_3:78614248-78614267 None:intergenic 45.0%
TGAACTATTCCTAGCAGGTC+GGG - chr3_3:78614306-78614325 None:intergenic 45.0%
CTGAACTATTCCTAGCAGGT+CGG - chr3_3:78614307-78614326 None:intergenic 45.0%
CTGAGGAGAAAATACCAGCT+TGG + chr3_3:78614363-78614382 Msa0475430:three_prime_UTR 45.0%
GAAAATACCAGCTTGGCAGT+TGG + chr3_3:78614370-78614389 Msa0475430:three_prime_UTR 45.0%
CCTTCTCCTCAGGATAAGAG+CGG - chr3_3:78610388-78610407 None:intergenic 50.0%
GGGTGTTTACTAGTAGCTGC+TGG + chr3_3:78610429-78610448 Msa0475430:CDS 50.0%
AGACGCGGCCCTTTCTAATT+GGG - chr3_3:78610975-78610994 None:intergenic 50.0%
AAGACGCGGCCCTTTCTAAT+TGG - chr3_3:78610976-78610995 None:intergenic 50.0%
CATGCTAGCCCACCTATCAA+AGG + chr3_3:78611148-78611167 Msa0475430:intron 50.0%
TTCTTGTGCCTTTCAAGCCG+GGG + chr3_3:78611535-78611554 Msa0475430:CDS 50.0%
! TATTGAAGCCCCGGCTTGAA+AGG - chr3_3:78611546-78611565 None:intergenic 50.0%
AGCCGGGGCTTCAATAATCA+AGG + chr3_3:78611550-78611569 Msa0475430:CDS 50.0%
! CGATGGTGCCTTGTTAGCAT+TGG - chr3_3:78612489-78612508 None:intergenic 50.0%
GGAAGGCAAGTAGGAAGATG+TGG - chr3_3:78613204-78613223 None:intergenic 50.0%
! ACCTGTAGGAACATGGTGGA+AGG - chr3_3:78613466-78613485 None:intergenic 50.0%
!! GGTTTTGTATGTGGTGACGC+TGG + chr3_3:78613483-78613502 Msa0475430:intron 50.0%
! GTGTCCTGTGGCAGAAGTAT+AGG + chr3_3:78613549-78613568 Msa0475430:intron 50.0%
! GTCCTGTGGCAGAAGTATAG+GGG + chr3_3:78613551-78613570 Msa0475430:intron 50.0%
! GCAGAAGTATAGGGGACTGA+TGG + chr3_3:78613559-78613578 Msa0475430:intron 50.0%
GGCTTCTCATCTGAGGACTA+AGG - chr3_3:78613688-78613707 None:intergenic 50.0%
!! TTTGGCTGGCTTCTCATCTG+AGG - chr3_3:78613695-78613714 None:intergenic 50.0%
CACCATCACAACCTGAGACA+TGG - chr3_3:78613907-78613926 None:intergenic 50.0%
CACACACGTGCACACATAGA+GGG - chr3_3:78614071-78614090 None:intergenic 50.0%
TCACACACGTGCACACATAG+AGG - chr3_3:78614072-78614091 None:intergenic 50.0%
! GTTCCTCCCTCTGGAAGATA+TGG - chr3_3:78614215-78614234 None:intergenic 50.0%
CTCAATGTTGTTCCTCCCTC+TGG - chr3_3:78614224-78614243 None:intergenic 50.0%
CCGCTCTTATCCTGAGGAGA+AGG + chr3_3:78610385-78610404 Msa0475430:CDS 55.0%
GCTTCAGTTGTAGTTGGCGC+TGG - chr3_3:78610952-78610971 None:intergenic 55.0%
GACGCGGCCCTTTCTAATTG+GGG - chr3_3:78610974-78610993 None:intergenic 55.0%
! GCCCACCTATCAAAGGCACA+TGG + chr3_3:78611155-78611174 Msa0475430:intron 55.0%
GCGCGTAGTTCAGACTCACT+TGG - chr3_3:78611191-78611210 None:intergenic 55.0%
GCCTTCCACCATGTTCCTAC+AGG + chr3_3:78613462-78613481 Msa0475430:intron 55.0%
ATATCGGGGCTTGTGTCCTG+TGG + chr3_3:78613537-78613556 Msa0475430:intron 55.0%
GTCCCCTATACTTCTGCCAC+AGG - chr3_3:78613556-78613575 None:intergenic 55.0%
ACGTAGAGCAGCGGAAGCAA+GGG - chr3_3:78613932-78613951 None:intergenic 55.0%
TACGTAGAGCAGCGGAAGCA+AGG - chr3_3:78613933-78613952 None:intergenic 55.0%
ACACATAGAGGGAGAGGGAG+AGG - chr3_3:78614060-78614079 None:intergenic 55.0%
CGTGCACACATAGAGGGAGA+GGG - chr3_3:78614065-78614084 None:intergenic 55.0%
ACGTGCACACATAGAGGGAG+AGG - chr3_3:78614066-78614085 None:intergenic 55.0%
ACAACACAACCCGACCTGCT+AGG + chr3_3:78614294-78614313 Msa0475430:CDS 55.0%
! TAGAGCACCAACTGCCAAGC+TGG - chr3_3:78614380-78614399 None:intergenic 55.0%
! GGCAGTTGGTGCTCTAACCA+TGG + chr3_3:78614384-78614403 Msa0475430:three_prime_UTR 55.0%
GCTAGCGCCAACAGTAGCTG+AGG + chr3_3:78610796-78610815 Msa0475430:intron 60.0%
!! TGTAGTTGGCGCTGGCTGAC+TGG - chr3_3:78610944-78610963 None:intergenic 60.0%
! GTGACGCTGGCTACTGAGCA+TGG + chr3_3:78613496-78613515 Msa0475430:intron 60.0%
! ACGCTGGCTACTGAGCATGG+TGG + chr3_3:78613499-78613518 Msa0475430:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 78610358 78614666 78610358 ID=Msa0475430;Name=Msa0475430
chr3_3 mRNA 78610358 78614666 78610358 ID=Msa0475430-mRNA-1;Parent=Msa0475430;Name=Msa0475430-mRNA-1;_AED=0.04;_eAED=0.04;_QI=20|0.83|0.85|1|1|1|7|329|227
chr3_3 exon 78610358 78610472 78610358 ID=Msa0475430-mRNA-1:exon:21206;Parent=Msa0475430-mRNA-1
chr3_3 exon 78611472 78611571 78611472 ID=Msa0475430-mRNA-1:exon:21207;Parent=Msa0475430-mRNA-1
chr3_3 exon 78611654 78611689 78611654 ID=Msa0475430-mRNA-1:exon:21208;Parent=Msa0475430-mRNA-1
chr3_3 exon 78611817 78611867 78611817 ID=Msa0475430-mRNA-1:exon:21209;Parent=Msa0475430-mRNA-1
chr3_3 exon 78613046 78613160 78613046 ID=Msa0475430-mRNA-1:exon:21210;Parent=Msa0475430-mRNA-1
chr3_3 exon 78613915 78614040 78613915 ID=Msa0475430-mRNA-1:exon:21211;Parent=Msa0475430-mRNA-1
chr3_3 exon 78614177 78614666 78614177 ID=Msa0475430-mRNA-1:exon:21212;Parent=Msa0475430-mRNA-1
chr3_3 five_prime_UTR 78610358 78610377 78610358 ID=Msa0475430-mRNA-1:five_prime_utr;Parent=Msa0475430-mRNA-1
chr3_3 CDS 78610378 78610472 78610378 ID=Msa0475430-mRNA-1:cds;Parent=Msa0475430-mRNA-1
chr3_3 CDS 78611472 78611571 78611472 ID=Msa0475430-mRNA-1:cds;Parent=Msa0475430-mRNA-1
chr3_3 CDS 78611654 78611689 78611654 ID=Msa0475430-mRNA-1:cds;Parent=Msa0475430-mRNA-1
chr3_3 CDS 78611817 78611867 78611817 ID=Msa0475430-mRNA-1:cds;Parent=Msa0475430-mRNA-1
chr3_3 CDS 78613046 78613160 78613046 ID=Msa0475430-mRNA-1:cds;Parent=Msa0475430-mRNA-1
chr3_3 CDS 78613915 78614040 78613915 ID=Msa0475430-mRNA-1:cds;Parent=Msa0475430-mRNA-1
chr3_3 CDS 78614177 78614337 78614177 ID=Msa0475430-mRNA-1:cds;Parent=Msa0475430-mRNA-1
chr3_3 three_prime_UTR 78614338 78614666 78614338 ID=Msa0475430-mRNA-1:three_prime_utr;Parent=Msa0475430-mRNA-1
Gene Sequence

>Msa0475430

ATGTTTTCCGCTCTTATCCTGAGGAGAAGGTACTCAATTAACCAAATTGTTGGGTGTTTACTAGTAGCTGCTGGTGTTGTGATTGCTATCTCAAGTGGCTCTAATGCAGGTCAAATGCTCTCTAAAGTTGATTTCGTGTGGCCAGCATTGATGATAGTTTCTTGTGCCTTTCAAGCCGGGGCTTCAATAATCAAGGAATTTGTTTTTCTTGATTCTTCCACTCGATTAAAGCAAAAGTCGTTGGATATATTTGTGGTCAATTCTTTTGGATCCGGATTTCAGGCTCTTTTCGTGCTTCTCTTTCTACCTTTAATCTCGAACTTGAAAGGAATACCATTTGTTCAACTACCTTCATATCTTAAAAGTGGTGCTGGTTGCTTTCTAAACATTGGAGCTGGTTGTGATGGTGCTCCCTTGCTTCCGCTGCTCTACGTAGTTACCAATTTGGCATTCAACATATCCCTGCTTAACGTACTAAAAAGTTCTTCTGCAGTTGTTGCTTCTCTCATGTTAATGTTGTCAGTGCCAATTTCTGTTTATGTTCTTTCCCTTCCATTACCATATCTTCCAGAGGGAGGAACAACATTGAGCCCATTCTTTCTGCTTGGTTGTGCAATTCTTGTATGTGGGCTTTATACATACAACACAACCCGACCTGCTAGGAATAGTTCAGAAGTTGACTGA

Protein sequence

>Msa0475430

MFSALILRRRYSINQIVGCLLVAAGVVIAISSGSNAGQMLSKVDFVWPALMIVSCAFQAGASIIKEFVFLDSSTRLKQKSLDIFVVNSFGSGFQALFVLLFLPLISNLKGIPFVQLPSYLKSGAGCFLNIGAGCDGAPLLPLLYVVTNLAFNISLLNVLKSSSAVVASLMLMLSVPISVYVLSLPLPYLPEGGTTLSPFFLLGCAILVCGLYTYNTTRPARNSSEVD*