Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181780 | XP_003592158.2 | 91.667 | 528 | 18 | 1 | 20 | 547 | 75 | 576 | 0.0 | 994 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181780 | sp|Q9FLW9|PKP2_ARATH | 80.115 | 523 | 78 | 1 | 21 | 543 | 83 | 579 | 0.0 | 876 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181780 | A0A396K762 | 91.667 | 528 | 18 | 1 | 20 | 547 | 75 | 576 | 0.0 | 994 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0181780 | -0.812796 | 3.540816e-51 | -8.615850e-47 |
| Msa0007810 | Msa0181780 | -0.812926 | 3.314853e-51 | -8.615850e-47 |
| Msa0011100 | Msa0181780 | -0.809193 | 2.135610e-50 | -8.615850e-47 |
| Msa0011410 | Msa0181780 | -0.832115 | 1.136063e-55 | -8.615850e-47 |
| Msa0011440 | Msa0181780 | -0.818542 | 1.856329e-52 | -8.615850e-47 |
| Msa0011450 | Msa0181780 | -0.810278 | 1.248227e-50 | -8.615850e-47 |
| Msa0016380 | Msa0181780 | -0.817237 | 3.658766e-52 | -8.615850e-47 |
| Msa0038150 | Msa0181780 | -0.809525 | 1.812939e-50 | -8.615850e-47 |
| Msa0040930 | Msa0181780 | 0.822548 | 2.233896e-53 | -8.615850e-47 |
| Msa0044530 | Msa0181780 | -0.822057 | 2.902967e-53 | -8.615850e-47 |
| Msa0047560 | Msa0181780 | -0.819197 | 1.317804e-52 | -8.615850e-47 |
| Msa0056230 | Msa0181780 | -0.824214 | 9.114109e-54 | -8.615850e-47 |
| Msa0065670 | Msa0181780 | -0.805086 | 1.581695e-49 | -8.615850e-47 |
| Msa0069070 | Msa0181780 | -0.808809 | 2.579998e-50 | -8.615850e-47 |
| Msa0069230 | Msa0181780 | -0.815771 | 7.791568e-52 | -8.615850e-47 |
| Msa0077570 | Msa0181780 | -0.811066 | 8.430175e-51 | -8.615850e-47 |
| Msa0085690 | Msa0181780 | -0.833963 | 3.942580e-56 | -8.615850e-47 |
| Msa0086370 | Msa0181780 | 0.903382 | 3.675762e-79 | -8.615850e-47 |
| Msa0086620 | Msa0181780 | -0.840079 | 1.079074e-57 | -8.615850e-47 |
| Msa0091220 | Msa0181780 | -0.810946 | 8.948622e-51 | -8.615850e-47 |
| Msa0091240 | Msa0181780 | -0.819047 | 1.425467e-52 | -8.615850e-47 |
| Msa0093360 | Msa0181780 | -0.804875 | 1.751318e-49 | -8.615850e-47 |
| Msa0094170 | Msa0181780 | -0.805493 | 1.299897e-49 | -8.615850e-47 |
| Msa0095810 | Msa0181780 | -0.808127 | 3.608660e-50 | -8.615850e-47 |
| Msa0105140 | Msa0181780 | -0.831105 | 2.015177e-55 | -8.615850e-47 |
| Msa0111110 | Msa0181780 | -0.802770 | 4.791643e-49 | -8.615850e-47 |
| Msa0122930 | Msa0181780 | -0.802225 | 6.205279e-49 | -8.615850e-47 |
| Msa0132080 | Msa0181780 | -0.802907 | 4.488821e-49 | -8.615850e-47 |
| Msa0133140 | Msa0181780 | -0.811308 | 7.471286e-51 | -8.615850e-47 |
| Msa0136180 | Msa0181780 | -0.816614 | 5.050123e-52 | -8.615850e-47 |
| Msa0145990 | Msa0181780 | -0.825147 | 5.493847e-54 | -8.615850e-47 |
| Msa0151380 | Msa0181780 | -0.839847 | 1.240105e-57 | -8.615850e-47 |
| Msa0151510 | Msa0181780 | -0.823319 | 1.476392e-53 | -8.615850e-47 |
| Msa0152190 | Msa0181780 | -0.802245 | 6.148157e-49 | -8.615850e-47 |
| Msa0154880 | Msa0181780 | -0.809017 | 2.329221e-50 | -8.615850e-47 |
| Msa0167570 | Msa0181780 | -0.805388 | 1.367555e-49 | -8.615850e-47 |
| Msa0181780 | Msa0211460 | 0.834483 | 2.919869e-56 | -8.615850e-47 |
| Msa0181780 | Msa0212950 | -0.826687 | 2.365875e-54 | -8.615850e-47 |
| Msa0181780 | Msa0213590 | -0.814183 | 1.753813e-51 | -8.615850e-47 |
| Msa0181780 | Msa0221180 | 0.820017 | 8.564619e-53 | -8.615850e-47 |
| Msa0181780 | Msa0225190 | -0.813464 | 2.525851e-51 | -8.615850e-47 |
| Msa0181780 | Msa0225790 | -0.813264 | 2.795273e-51 | -8.615850e-47 |
| Msa0181780 | Msa0253230 | -0.830118 | 3.515992e-55 | -8.615850e-47 |
| Msa0181780 | Msa0259450 | -0.801434 | 9.021945e-49 | -8.615850e-47 |
| Msa0181780 | Msa0259570 | -0.803590 | 3.242044e-49 | -8.615850e-47 |
| Msa0181780 | Msa0260580 | -0.805693 | 1.180015e-49 | -8.615850e-47 |
| Msa0181780 | Msa0260640 | -0.808365 | 3.210815e-50 | -8.615850e-47 |
| Msa0181780 | Msa0261350 | -0.805244 | 1.466118e-49 | -8.615850e-47 |
| Msa0181780 | Msa0262350 | -0.824279 | 8.796074e-54 | -8.615850e-47 |
| Msa0181780 | Msa0266140 | -0.802380 | 5.767625e-49 | -8.615850e-47 |
| Msa0181780 | Msa0266330 | -0.804017 | 2.643321e-49 | -8.615850e-47 |
| Msa0181780 | Msa0267450 | -0.819401 | 1.184049e-52 | -8.615850e-47 |
| Msa0181780 | Msa0267510 | -0.819387 | 1.192690e-52 | -8.615850e-47 |
| Msa0181780 | Msa0268870 | -0.806078 | 9.793512e-50 | -8.615850e-47 |
| Msa0181780 | Msa0287480 | 0.804581 | 2.016657e-49 | -8.615850e-47 |
| Msa0181780 | Msa0293060 | -0.828770 | 7.472457e-55 | -8.615850e-47 |
| Msa0181780 | Msa0293070 | -0.809123 | 2.210132e-50 | -8.615850e-47 |
| Msa0181780 | Msa0299130 | -0.813048 | 3.116617e-51 | -8.615850e-47 |
| Msa0181780 | Msa0300130 | -0.818983 | 1.474182e-52 | -8.615850e-47 |
| Msa0181780 | Msa0300470 | 0.805823 | 1.108256e-49 | -8.615850e-47 |
| Msa0181780 | Msa0302200 | 0.806162 | 9.403823e-50 | -8.615850e-47 |
| Msa0181780 | Msa0305630 | -0.804757 | 1.852818e-49 | -8.615850e-47 |
| Msa0181780 | Msa0307630 | 0.804601 | 1.997941e-49 | -8.615850e-47 |
| Msa0181780 | Msa0314020 | 0.803979 | 2.691701e-49 | -8.615850e-47 |
| Msa0181780 | Msa0317820 | -0.803409 | 3.535229e-49 | -8.615850e-47 |
| Msa0181780 | Msa0331070 | -0.824622 | 7.306716e-54 | -8.615850e-47 |
| Msa0181780 | Msa0337610 | -0.805235 | 1.472364e-49 | -8.615850e-47 |
| Msa0181780 | Msa0337970 | 0.809978 | 1.448408e-50 | -8.615850e-47 |
| Msa0181780 | Msa0339530 | 0.802215 | 6.234481e-49 | -8.615850e-47 |
| Msa0181780 | Msa0340700 | -0.815683 | 8.152184e-52 | -8.615850e-47 |
| Msa0181780 | Msa0357530 | 0.810475 | 1.131520e-50 | -8.615850e-47 |
| Msa0181780 | Msa0364030 | -0.812212 | 4.750577e-51 | -8.615850e-47 |
| Msa0181780 | Msa0364910 | -0.814965 | 1.177421e-51 | -8.615850e-47 |
| Msa0181780 | Msa0369080 | -0.805585 | 1.243432e-49 | -8.615850e-47 |
| Msa0181780 | Msa0371350 | -0.815558 | 8.692520e-52 | -8.615850e-47 |
| Msa0181780 | Msa0386230 | -0.822807 | 1.944268e-53 | -8.615850e-47 |
| Msa0181780 | Msa0403740 | -0.812134 | 4.940063e-51 | -8.615850e-47 |
| Msa0181780 | Msa0404710 | -0.808298 | 3.317787e-50 | -8.615850e-47 |
| Msa0181780 | Msa0412580 | -0.817080 | 3.970213e-52 | -8.615850e-47 |
| Msa0181780 | Msa0419150 | -0.807428 | 5.080513e-50 | -8.615850e-47 |
| Msa0181780 | Msa0427230 | -0.805283 | 1.438772e-49 | -8.615850e-47 |
| Msa0181780 | Msa0437820 | -0.801367 | 9.310500e-49 | -8.615850e-47 |
| Msa0181780 | Msa0450890 | -0.807277 | 5.466991e-50 | -8.615850e-47 |
| Msa0181780 | Msa0456450 | -0.811287 | 7.550178e-51 | -8.615850e-47 |
| Msa0181780 | Msa0463820 | -0.807603 | 4.663988e-50 | -8.615850e-47 |
| Msa0181780 | Msa0464980 | -0.802468 | 5.531367e-49 | -8.615850e-47 |
| Msa0181780 | Msa0473740 | -0.809577 | 1.766129e-50 | -8.615850e-47 |
| Msa0181780 | Msa0474660 | -0.814972 | 1.173507e-51 | -8.615850e-47 |
| Msa0181780 | Msa0476570 | -0.801142 | 1.035410e-48 | -8.615850e-47 |
| Msa0181780 | Msa0480900 | -0.807109 | 5.935106e-50 | -8.615850e-47 |
| Msa0181780 | Msa0484590 | -0.840168 | 1.022625e-57 | -8.615850e-47 |
| Msa0181780 | Msa0490740 | -0.830993 | 2.147008e-55 | -8.615850e-47 |
| Msa0181780 | Msa0506700 | -0.825827 | 3.790807e-54 | -8.615850e-47 |
| Msa0181780 | Msa0525180 | -0.857929 | 1.167168e-62 | -8.615850e-47 |
| Msa0181780 | Msa0548260 | -0.805761 | 1.141839e-49 | -8.615850e-47 |
| Msa0181780 | Msa0557440 | -0.812914 | 3.335984e-51 | -8.615850e-47 |
| Msa0181780 | Msa0559640 | -0.801630 | 8.222907e-49 | -8.615850e-47 |
| Msa0181780 | Msa0568460 | -0.808191 | 3.496743e-50 | -8.615850e-47 |
| Msa0181780 | Msa0580410 | -0.809590 | 1.755109e-50 | -8.615850e-47 |
| Msa0181780 | Msa0580890 | -0.804525 | 2.071641e-49 | -8.615850e-47 |
| Msa0181780 | Msa0582270 | -0.809703 | 1.659739e-50 | -8.615850e-47 |
| Msa0181780 | Msa0582550 | -0.817448 | 3.279982e-52 | -8.615850e-47 |
| Msa0181780 | Msa0597370 | -0.834866 | 2.339249e-56 | -8.615850e-47 |
| Msa0181780 | Msa0603180 | -0.828919 | 6.878543e-55 | -8.615850e-47 |
| Msa0181780 | Msa0603600 | -0.814664 | 1.372940e-51 | -8.615850e-47 |
| Msa0181780 | Msa0605210 | -0.806972 | 6.343199e-50 | -8.615850e-47 |
| Msa0181780 | Msa0616890 | -0.802594 | 5.210354e-49 | -8.615850e-47 |
| Msa0181780 | Msa0622450 | -0.820787 | 5.704205e-53 | -8.615850e-47 |
| Msa0181780 | Msa0673620 | -0.821732 | 3.452027e-53 | -8.615850e-47 |
| Msa0181780 | Msa0676570 | -0.831222 | 1.885967e-55 | -8.615850e-47 |
| Msa0181780 | Msa0684030 | -0.825701 | 4.060820e-54 | -8.615850e-47 |
| Msa0181780 | Msa0685390 | -0.811366 | 7.258053e-51 | -8.615850e-47 |
| Msa0181780 | Msa0695250 | -0.823414 | 1.403229e-53 | -8.615850e-47 |
| Msa0181780 | Msa0701800 | -0.807792 | 4.252306e-50 | -8.615850e-47 |
| Msa0181780 | Msa0713570 | -0.804250 | 2.364117e-49 | -8.615850e-47 |
| Msa0181780 | Msa0714230 | -0.819388 | 1.192523e-52 | -8.615850e-47 |
| Msa0181780 | Msa0729740 | -0.808077 | 3.696625e-50 | -8.615850e-47 |
| Msa0181780 | Msa0750200 | -0.820171 | 7.898247e-53 | -8.615850e-47 |
| Msa0181780 | Msa0755480 | -0.832269 | 1.040861e-55 | -8.615850e-47 |
| Msa0181780 | Msa0758880 | -0.800686 | 1.283044e-48 | -8.615850e-47 |
| Msa0181780 | Msa0766910 | -0.809319 | 2.006502e-50 | -8.615850e-47 |
| Msa0181780 | Msa0769910 | -0.804211 | 2.408781e-49 | -8.615850e-47 |
| Msa0181780 | Msa0790650 | -0.827809 | 1.274078e-54 | -8.615850e-47 |
| Msa0181780 | Msa0792410 | 0.804811 | 1.805446e-49 | -8.615850e-47 |
| Msa0181780 | Msa0794900 | -0.806291 | 8.832019e-50 | -8.615850e-47 |
| Msa0181780 | Msa0795910 | -0.811672 | 6.228296e-51 | -8.615850e-47 |
| Msa0181780 | Msa0801920 | -0.812341 | 4.452189e-51 | -8.615850e-47 |
| Msa0181780 | Msa0823480 | -0.810014 | 1.422414e-50 | -8.615850e-47 |
| Msa0181780 | Msa0826820 | -0.808061 | 3.726414e-50 | -8.615850e-47 |
| Msa0181780 | Msa0827340 | -0.809158 | 2.172694e-50 | -8.615850e-47 |
| Msa0181780 | Msa0829250 | -0.808229 | 3.432519e-50 | -8.615850e-47 |
| Msa0181780 | Msa0833360 | -0.807834 | 4.164003e-50 | -8.615850e-47 |
| Msa0181780 | Msa0835050 | -0.804092 | 2.549374e-49 | -8.615850e-47 |
| Msa0181780 | Msa0838120 | -0.816046 | 6.766503e-52 | -8.615850e-47 |
| Msa0181780 | Msa0848670 | -0.806917 | 6.515292e-50 | -8.615850e-47 |
| Msa0181780 | Msa0865500 | -0.803465 | 3.440901e-49 | -8.615850e-47 |
| Msa0181780 | Msa0882480 | -0.801142 | 1.035097e-48 | -8.615850e-47 |
| Msa0181780 | Msa0888520 | -0.807012 | 6.222334e-50 | -8.615850e-47 |
| Msa0181780 | Msa0941150 | -0.830282 | 3.207009e-55 | -8.615850e-47 |
| Msa0181780 | Msa0945160 | -0.823314 | 1.480398e-53 | -8.615850e-47 |
| Msa0181780 | Msa0964400 | -0.845257 | 4.547129e-59 | -8.615850e-47 |
| Msa0181780 | Msa0978550 | -0.800072 | 1.710597e-48 | -8.615850e-47 |
| Msa0181780 | Msa0984230 | -0.806982 | 6.314636e-50 | -8.615850e-47 |
| Msa0181780 | Msa1002550 | -0.819755 | 9.831170e-53 | -8.615850e-47 |
| Msa0181780 | Msa1011140 | -0.802800 | 4.723280e-49 | -8.615850e-47 |
| Msa0181780 | Msa1026160 | -0.803570 | 3.273478e-49 | -8.615850e-47 |
| Msa0181780 | Msa1028890 | -0.818683 | 1.724470e-52 | -8.615850e-47 |
| Msa0181780 | Msa1031190 | -0.814196 | 1.742619e-51 | -8.615850e-47 |
| Msa0181780 | Msa1037440 | -0.808752 | 2.653326e-50 | -8.615850e-47 |
| Msa0181780 | Msa1039150 | -0.800833 | 1.197204e-48 | -8.615850e-47 |
| Msa0181780 | Msa1039440 | -0.805223 | 1.480433e-49 | -8.615850e-47 |
| Msa0181780 | Msa1042300 | 0.805676 | 1.189813e-49 | -8.615850e-47 |
| Msa0181780 | Msa1044050 | -0.800297 | 1.539358e-48 | -8.615850e-47 |
| Msa0181780 | Msa1058550 | -0.824730 | 6.888681e-54 | -8.615850e-47 |
| Msa0181780 | Msa1068010 | -0.822217 | 2.665343e-53 | -8.615850e-47 |
| Msa0181780 | Msa1070370 | -0.812435 | 4.245621e-51 | -8.615850e-47 |
| Msa0181780 | Msa1078120 | -0.817266 | 3.605601e-52 | -8.615850e-47 |
| Msa0181780 | Msa1106730 | -0.807861 | 4.110531e-50 | -8.615850e-47 |
| Msa0181780 | Msa1119420 | -0.813147 | 2.965748e-51 | -8.615850e-47 |
| Msa0181780 | Msa1121720 | -0.804964 | 1.677544e-49 | -8.615850e-47 |
| Msa0181780 | Msa1128520 | -0.815666 | 8.226262e-52 | -8.615850e-47 |
| Msa0181780 | Msa1129880 | -0.805881 | 1.077617e-49 | -8.615850e-47 |
| Msa0181780 | Msa1130150 | -0.829482 | 5.022657e-55 | -8.615850e-47 |
| Msa0181780 | Msa1132250 | -0.803410 | 3.533087e-49 | -8.615850e-47 |
| Msa0181780 | Msa1132880 | -0.812809 | 3.516450e-51 | -8.615850e-47 |
| Msa0181780 | Msa1156100 | -0.830050 | 3.652797e-55 | -8.615850e-47 |
| Msa0181780 | Msa1156430 | -0.806176 | 9.340596e-50 | -8.615850e-47 |
| Msa0181780 | Msa1158180 | -0.813764 | 2.170046e-51 | -8.615850e-47 |
| Msa0181780 | Msa1191530 | -0.817050 | 4.031209e-52 | -8.615850e-47 |
| Msa0181780 | Msa1199540 | -0.816522 | 5.295396e-52 | -8.615850e-47 |
| Msa0181780 | Msa1199700 | -0.800138 | 1.658943e-48 | -8.615850e-47 |
| Msa0181780 | Msa1203320 | -0.800705 | 1.271708e-48 | -8.615850e-47 |
| Msa0181780 | Msa1204870 | -0.810564 | 1.082866e-50 | -8.615850e-47 |
| Msa0181780 | Msa1205120 | 0.806454 | 8.163372e-50 | -8.615850e-47 |
| Msa0181780 | Msa1212150 | -0.816986 | 4.168227e-52 | -8.615850e-47 |
| Msa0181780 | Msa1223540 | 0.802320 | 5.932664e-49 | -8.615850e-47 |
| Msa0181780 | Msa1223620 | 0.803312 | 3.702435e-49 | -8.615850e-47 |
| Msa0181780 | Msa1246830 | 0.801911 | 7.200696e-49 | -8.615850e-47 |
| Msa0181780 | Msa1255030 | -0.800072 | 1.710597e-48 | -8.615850e-47 |
| Msa0181780 | Msa1256490 | -0.803221 | 3.866166e-49 | -8.615850e-47 |
| Msa0181780 | Msa1263520 | 0.810395 | 1.177806e-50 | -8.615850e-47 |
| Msa0181780 | Msa1266120 | -0.820823 | 5.594951e-53 | -8.615850e-47 |
| Msa0181780 | Msa1273320 | 0.826682 | 2.372366e-54 | -8.615850e-47 |
| Msa0181780 | Msa1279200 | -0.816362 | 5.749707e-52 | -8.615850e-47 |
| Msa0181780 | Msa1287100 | -0.838364 | 3.004235e-57 | -8.615850e-47 |
| Msa0181780 | Msa1296810 | -0.805769 | 1.137674e-49 | -8.615850e-47 |
| Msa0181780 | Msa1308850 | 0.800919 | 1.149545e-48 | -8.615850e-47 |
| Msa0181780 | Msa1328680 | -0.812906 | 3.348295e-51 | -8.615850e-47 |
| Msa0181780 | Msa1341710 | -0.810912 | 9.104337e-51 | -8.615850e-47 |
| Msa0181780 | Msa1342360 | -0.811766 | 5.941737e-51 | -8.615850e-47 |
| Msa0181780 | Msa1350590 | -0.800231 | 1.588082e-48 | -8.615850e-47 |
| Msa0181780 | Msa1356100 | -0.806119 | 9.602765e-50 | -8.615850e-47 |
| Msa0181780 | Msa1361580 | -0.805201 | 1.496702e-49 | -8.615850e-47 |
| Msa0181780 | Msa1366140 | -0.805857 | 1.090170e-49 | -8.615850e-47 |
| Msa0181780 | Msa1373420 | -0.803679 | 3.106463e-49 | -8.615850e-47 |
| Msa0181780 | Msa1384970 | -0.806415 | 8.318503e-50 | -8.615850e-47 |
| Msa0181780 | Msa1386910 | -0.821814 | 3.304721e-53 | -8.615850e-47 |
| Msa0181780 | Msa1387450 | -0.819122 | 1.371044e-52 | -8.615850e-47 |
| Msa0181780 | Msa1408230 | -0.806168 | 9.376743e-50 | -8.615850e-47 |
| Msa0181780 | Msa1410500 | -0.808701 | 2.721617e-50 | -8.615850e-47 |
| Msa0181780 | Msa1415510 | -0.820292 | 7.410142e-53 | -8.615850e-47 |
| Msa0181780 | Msa1428230 | -0.801001 | 1.106501e-48 | -8.615850e-47 |
| Msa0181780 | Msa1439000 | -0.802813 | 4.695101e-49 | -8.615850e-47 |
| Msa0181780 | Msa1451200 | -0.827369 | 1.625605e-54 | -8.615850e-47 |
| Msa0181780 | Msa1459130 | -0.808406 | 3.145939e-50 | -8.615850e-47 |
| Msa0181780 | Msa1462610 | 0.803693 | 3.085788e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181780 | MtrunA17_Chr1g0202291 | 91.667 | 528 | 18 | 1 | 20 | 547 | 75 | 576 | 0.0 | 994 |
| Msa0181780 | MtrunA17_Chr6g0463101 | 81.939 | 526 | 67 | 2 | 20 | 543 | 75 | 574 | 0.0 | 885 |
| Msa0181780 | MtrunA17_Chr5g0400361 | 69.416 | 497 | 126 | 1 | 47 | 543 | 76 | 546 | 0.0 | 704 |
| Msa0181780 | MtrunA17_Chr1g0188101 | 42.942 | 503 | 239 | 8 | 48 | 529 | 89 | 564 | 2.36e-117 | 358 |
| Msa0181780 | MtrunA17_Chr1g0206791 | 38.207 | 513 | 272 | 10 | 48 | 543 | 16 | 500 | 5.09e-106 | 327 |
| Msa0181780 | MtrunA17_Chr6g0448901 | 35.178 | 506 | 259 | 13 | 49 | 519 | 21 | 492 | 6.83e-80 | 259 |
| Msa0181780 | MtrunA17_Chr4g0043311 | 34.646 | 508 | 263 | 13 | 47 | 519 | 6 | 479 | 1.47e-78 | 255 |
| Msa0181780 | MtrunA17_Chr4g0043301 | 33.010 | 515 | 270 | 13 | 47 | 523 | 9 | 486 | 2.10e-76 | 250 |
| Msa0181780 | MtrunA17_Chr7g0263711 | 33.855 | 511 | 263 | 14 | 47 | 519 | 9 | 482 | 2.31e-76 | 249 |
| Msa0181780 | MtrunA17_Chr1g0197911 | 25.977 | 512 | 311 | 16 | 50 | 523 | 30 | 511 | 6.02e-37 | 144 |
| Msa0181780 | MtrunA17_Chr7g0265591 | 25.391 | 512 | 315 | 14 | 50 | 523 | 30 | 512 | 5.43e-36 | 141 |
| Msa0181780 | MtrunA17_Chr1g0179541 | 25.241 | 519 | 293 | 16 | 50 | 523 | 30 | 498 | 7.06e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181780 | AT5G52920.1 | 80.115 | 523 | 78 | 1 | 21 | 543 | 83 | 579 | 0.0 | 876 |
| Msa0181780 | AT1G32440.1 | 71.026 | 497 | 117 | 2 | 47 | 543 | 98 | 567 | 0.0 | 720 |
| Msa0181780 | AT3G22960.1 | 43.912 | 501 | 235 | 8 | 48 | 529 | 117 | 590 | 2.17e-119 | 365 |
| Msa0181780 | AT3G25960.1 | 33.929 | 504 | 281 | 10 | 38 | 519 | 6 | 479 | 5.38e-80 | 259 |
| Msa0181780 | AT3G55650.1 | 32.816 | 515 | 285 | 10 | 38 | 519 | 6 | 492 | 1.18e-79 | 259 |
| Msa0181780 | AT5G56350.1 | 33.779 | 524 | 273 | 15 | 47 | 532 | 7 | 494 | 3.18e-78 | 255 |
| Msa0181780 | AT4G26390.1 | 33.595 | 509 | 280 | 11 | 47 | 525 | 6 | 486 | 2.98e-77 | 252 |
| Msa0181780 | AT5G63680.3 | 35.200 | 500 | 267 | 12 | 49 | 519 | 21 | 492 | 3.74e-77 | 252 |
| Msa0181780 | AT5G63680.1 | 35.200 | 500 | 267 | 12 | 49 | 519 | 21 | 492 | 3.74e-77 | 252 |
| Msa0181780 | AT5G63680.2 | 35.200 | 500 | 267 | 12 | 49 | 519 | 21 | 492 | 3.74e-77 | 252 |
| Msa0181780 | AT3G04050.1 | 32.108 | 517 | 286 | 11 | 38 | 519 | 6 | 492 | 1.59e-76 | 251 |
| Msa0181780 | AT5G08570.1 | 34.731 | 501 | 268 | 13 | 49 | 519 | 21 | 492 | 3.02e-76 | 250 |
| Msa0181780 | AT5G08570.2 | 34.731 | 501 | 268 | 13 | 49 | 519 | 21 | 492 | 3.02e-76 | 250 |
| Msa0181780 | AT5G08570.3 | 34.731 | 501 | 268 | 13 | 49 | 519 | 21 | 492 | 3.02e-76 | 250 |
| Msa0181780 | AT3G55810.1 | 30.874 | 515 | 277 | 12 | 38 | 519 | 6 | 474 | 2.46e-65 | 221 |
| Msa0181780 | AT2G36580.1 | 26.459 | 514 | 307 | 15 | 50 | 523 | 30 | 512 | 5.74e-39 | 150 |
| Msa0181780 | AT3G52990.1 | 26.070 | 514 | 309 | 15 | 50 | 523 | 30 | 512 | 2.95e-37 | 145 |
| Msa0181780 | AT3G52990.2 | 25.306 | 490 | 295 | 15 | 74 | 523 | 1 | 459 | 1.38e-31 | 128 |
| Msa0181780 | AT3G49160.3 | 26.104 | 249 | 152 | 7 | 157 | 400 | 385 | 606 | 2.99e-14 | 76.3 |
| Msa0181780 | AT3G49160.1 | 26.104 | 249 | 152 | 7 | 157 | 400 | 473 | 694 | 3.59e-14 | 75.9 |
Find 147 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAAGTTGGTAATGTTTC+TGG | 0.172900 | 1_4:+70009827 | Msa0181780:CDS |
| TCCGATGGAATAATGCTTTC+TGG | 0.190585 | 1_4:+70012660 | Msa0181780:CDS |
| GATTGGGATGACATCAAATT+TGG | 0.216798 | 1_4:+70011187 | Msa0181780:CDS |
| ACTAAGATTGTTTGTACTAT+TGG | 0.260506 | 1_4:+70009884 | Msa0181780:CDS |
| TTGATACCAATCTTGCATTT+TGG | 0.271787 | 1_4:+70014696 | Msa0181780:three_prime_UTR |
| CTGATCAGTAAAAGCAAATA+TGG | 0.278721 | 1_4:-70013330 | None:intergenic |
| TTGAATACTTGGCCAATATT+AGG | 0.283361 | 1_4:-70013041 | None:intergenic |
| ATTACTTTCGCAGCTTTAAT+TGG | 0.294022 | 1_4:-70012966 | None:intergenic |
| TTCTTCTGTAAACTCTTCTA+TGG | 0.307511 | 1_4:+70014792 | Msa0181780:three_prime_UTR |
| TCAGAGAATTCCATGTAAAT+AGG | 0.315231 | 1_4:-70014075 | None:intergenic |
| CCATTCCACTCACAATATTC+AGG | 0.322453 | 1_4:+70014589 | Msa0181780:CDS |
| ATCGATAACTTCGCATTTCA+CGG | 0.329487 | 1_4:-70010937 | None:intergenic |
| AATATAACAGTCCCGGGATA+TGG | 0.334153 | 1_4:-70014898 | None:intergenic |
| TCATAAGAAAGTTATTGATT+TGG | 0.344192 | 1_4:+70010000 | Msa0181780:CDS |
| ATTTCCTTTGTATTAGTAGA+AGG | 0.347373 | 1_4:-70009908 | None:intergenic |
| AAAAGCCTTGGATTTGTTGC+AGG | 0.348377 | 1_4:+70014119 | Msa0181780:CDS |
| CTAATACAAAGGAAATGATT+TGG | 0.354416 | 1_4:+70009915 | Msa0181780:CDS |
| GAAAGTTATTGATTTGGTTA+AGG | 0.365961 | 1_4:+70010006 | Msa0181780:CDS |
| CAATGCAGGAAGAGATAATA+AGG | 0.371949 | 1_4:+70012517 | Msa0181780:intron |
| TGGTGCCTGCAGGTCGATAA+TGG | 0.377025 | 1_4:-70013310 | None:intergenic |
| CTTCACTAGATCGGGTTTCA+TGG | 0.377434 | 1_4:+70013274 | Msa0181780:CDS |
| AAAAGCGGAACCTCCTCAAT+AGG | 0.380743 | 1_4:-70012377 | None:intergenic |
| CGGAGACATTTGAATGTTAG+AGG | 0.383246 | 1_4:+70010978 | Msa0181780:CDS |
| GGATAGTAAAAGTGAATTCC+TGG | 0.383564 | 1_4:-70010247 | None:intergenic |
| CATACTTTCCAGCATATTTG+TGG | 0.385316 | 1_4:-70012574 | None:intergenic |
| CATATGTTAGTTCATGTCAT+TGG | 0.385820 | 1_4:+70014837 | Msa0181780:three_prime_UTR |
| CTATGCCGTTTCTTTCGTTA+AGG | 0.387859 | 1_4:+70011231 | Msa0181780:CDS |
| ACCTCTGCTCTGGTTGGCGT+GGG | 0.401155 | 1_4:-70012606 | None:intergenic |
| ATTTGGAAACTTGCTGAGGC+TGG | 0.403880 | 1_4:+70009932 | Msa0181780:CDS |
| TGTATAGATTGAGGCGGAGT+TGG | 0.408751 | 1_4:+70009787 | Msa0181780:intron |
| CATATTTGTGGCTACAATAA+CGG | 0.414729 | 1_4:-70012562 | None:intergenic |
| ACTGTTGTCTTCACTAGATC+GGG | 0.417400 | 1_4:+70013266 | Msa0181780:CDS |
| GGTTCAATATTTAGTTAGAA+TGG | 0.418276 | 1_4:+70014813 | Msa0181780:three_prime_UTR |
| GGGCAGATGCCACCTAATAT+TGG | 0.424869 | 1_4:+70013029 | Msa0181780:CDS |
| AAAGTGGAAGGCAACCTATA+TGG | 0.425350 | 1_4:+70014561 | Msa0181780:CDS |
| AAATAACCAAAATGCAAGAT+TGG | 0.425896 | 1_4:-70014702 | None:intergenic |
| CAGAGGTTGGCTTTGTATCA+AGG | 0.427960 | 1_4:+70014045 | Msa0181780:CDS |
| TTTCACGGAATCCGCTGTCT+TGG | 0.428216 | 1_4:-70010922 | None:intergenic |
| AAGTTTAGACCTTGAATACT+TGG | 0.428867 | 1_4:-70013052 | None:intergenic |
| ATTTGTTGCAGAAAAGGATT+GGG | 0.432529 | 1_4:+70011171 | Msa0181780:intron |
| TTAGTCTTTCTTCTAACCAT+TGG | 0.438719 | 1_4:-70009866 | None:intergenic |
| TGTTTCCATATGCAGAAGAA+TGG | 0.453443 | 1_4:+70014503 | Msa0181780:intron |
| AACTGTTGTCTTCACTAGAT+CGG | 0.453467 | 1_4:+70013265 | Msa0181780:CDS |
| AATTTGTTGCAGAAAAGGAT+TGG | 0.453541 | 1_4:+70011170 | Msa0181780:intron |
| GTTGCCTTCCACTTTGTACA+AGG | 0.457075 | 1_4:-70014553 | None:intergenic |
| TCAATTATTACTGCATCTGA+TGG | 0.461675 | 1_4:+70011466 | Msa0181780:CDS |
| AATTTGTGGCGGCTACTGTT+CGG | 0.466689 | 1_4:-70014613 | None:intergenic |
| TAATATTGGCCAAGTATTCA+AGG | 0.466771 | 1_4:+70013043 | Msa0181780:CDS |
| AGGTGGTATGATGTCCTTCT+TGG | 0.469108 | 1_4:+70010893 | Msa0181780:intron |
| GTAATAATTGAATGCAAGTT+CGG | 0.469193 | 1_4:-70011454 | None:intergenic |
| GCGAAATAAGAATAAGAGAT+GGG | 0.472822 | 1_4:-70009661 | None:intergenic |
| ACTGTAGTAGCAAGGTTGTC+AGG | 0.475174 | 1_4:+70011570 | Msa0181780:intron |
| ATGGTTGCAAGAGGAGATCT+TGG | 0.484762 | 1_4:+70012344 | Msa0181780:CDS |
| TAATGCACACCGTAGCATTA+CGG | 0.486804 | 1_4:+70012985 | Msa0181780:CDS |
| GGGGACATGCTTCTTGTTGA+CGG | 0.487278 | 1_4:+70010338 | Msa0181780:CDS |
| AGAGACATTCACAAAAGCCT+TGG | 0.488109 | 1_4:+70014107 | Msa0181780:CDS |
| TTTGTCAATGATGTTGAAGA+AGG | 0.492314 | 1_4:+70010317 | Msa0181780:CDS |
| AAAGTCTAACCAGTGATTGA+AGG | 0.493534 | 1_4:-70011017 | None:intergenic |
| CAATTATTACTGCATCTGAT+GGG | 0.495858 | 1_4:+70011467 | Msa0181780:CDS |
| TCCAAGGGTATTAGACATCA+TGG | 0.496663 | 1_4:-70013237 | None:intergenic |
| TACCTCTGCTCTGGTTGGCG+TGG | 0.497055 | 1_4:-70012607 | None:intergenic |
| AAAGCGGAACCTCCTCAATA+GGG | 0.498685 | 1_4:-70012376 | None:intergenic |
| AGAGGTTGAAACTTAATTTG+TGG | 0.499961 | 1_4:-70014627 | None:intergenic |
| AAGAATGGAATGGTTAAAGA+AGG | 0.500527 | 1_4:+70014518 | Msa0181780:CDS |
| TCCAGAAAGCATTATTCCAT+CGG | 0.500745 | 1_4:-70012661 | None:intergenic |
| AATCACATTCAGCCATATCC+CGG | 0.503303 | 1_4:+70014886 | Msa0181780:three_prime_UTR |
| TATTGTAGCCACAAATATGC+TGG | 0.504931 | 1_4:+70012566 | Msa0181780:CDS |
| GGGTCCTGAGGTTAGGAGTG+GGG | 0.506757 | 1_4:+70010193 | Msa0181780:intron |
| ACCATGATGTCTAATACCCT+TGG | 0.514111 | 1_4:+70013236 | Msa0181780:CDS |
| TTTACTATCCAGAGTGGCGT+TGG | 0.515163 | 1_4:+70010260 | Msa0181780:CDS |
| CAAGCTAAATATAACAGTCC+CGG | 0.519525 | 1_4:-70014905 | None:intergenic |
| GCAACACTGCCTTCAATCAC+TGG | 0.520688 | 1_4:+70011008 | Msa0181780:CDS |
| CAGCAGTTCCAACGCCACTC+TGG | 0.522112 | 1_4:-70010268 | None:intergenic |
| TTGGTGGCTATGCAGGAAAA+GGG | 0.522574 | 1_4:+70014017 | Msa0181780:intron |
| TGCAATTATGCTTGACACCA+AGG | 0.524078 | 1_4:+70010060 | Msa0181780:CDS |
| AATATCAGATACCTCTGCTC+TGG | 0.526914 | 1_4:-70012616 | None:intergenic |
| GTGGAATGGAACCTCCATAT+AGG | 0.530502 | 1_4:-70014575 | None:intergenic |
| TGCATCCTTAACGAAAGAAA+CGG | 0.532070 | 1_4:-70011236 | None:intergenic |
| GAAGTAGCCCTTGTACAAAG+TGG | 0.532110 | 1_4:+70014545 | Msa0181780:CDS |
| CACTCATCAAATGCAGGCTG+TGG | 0.533625 | 1_4:+70011385 | Msa0181780:CDS |
| TTGTCAATGATGTTGAAGAA+GGG | 0.535922 | 1_4:+70010318 | Msa0181780:CDS |
| AGGGTCCTGAGGTTAGGAGT+GGG | 0.537150 | 1_4:+70010192 | Msa0181780:intron |
| TTGAGCCATTATCGACCTGC+AGG | 0.540869 | 1_4:+70013305 | Msa0181780:CDS |
| AATAAGGATATGCCGTAGCA+TGG | 0.541078 | 1_4:+70012533 | Msa0181780:CDS |
| AGGTGTCTGTCCTATTTACA+TGG | 0.542712 | 1_4:+70014065 | Msa0181780:CDS |
| AAAGCAAATATGGTGCCTGC+AGG | 0.543058 | 1_4:-70013320 | None:intergenic |
| AGCGAAATAAGAATAAGAGA+TGG | 0.543699 | 1_4:-70009662 | None:intergenic |
| TTAGGTGGCATCTGCCCACT+TGG | 0.546105 | 1_4:-70013023 | None:intergenic |
| TAGGGTCCTGAGGTTAGGAG+TGG | 0.547849 | 1_4:+70010191 | Msa0181780:intron |
| TGTCAATGATGTTGAAGAAG+GGG | 0.549759 | 1_4:+70010319 | Msa0181780:CDS |
| GAAAAGGGTACAACAGAGGT+TGG | 0.552967 | 1_4:+70014032 | Msa0181780:CDS |
| TCACATGATAATAGTACTCA+AGG | 0.556126 | 1_4:-70014951 | None:intergenic |
| CAATTCCACTCATCAAATGC+AGG | 0.556264 | 1_4:+70011379 | Msa0181780:CDS |
| AAGCTAAATATAACAGTCCC+GGG | 0.556761 | 1_4:-70014904 | None:intergenic |
| ATTGCAATTGCTGTTCGAGA+AGG | 0.562992 | 1_4:+70012636 | Msa0181780:CDS |
| GGCTTCTGTCCGTAATGCTA+CGG | 0.565887 | 1_4:-70012994 | None:intergenic |
| AGACAACAGTTGATGTTCCA+AGG | 0.567684 | 1_4:-70013253 | None:intergenic |
| TGGTCCTTCTACTAATACAA+AGG | 0.568271 | 1_4:+70009904 | Msa0181780:CDS |
| AAATCCCCACTCCTAACCTC+AGG | 0.568605 | 1_4:-70010197 | None:intergenic |
| ATCTTTGTACCGCTCCAACT+CGG | 0.571997 | 1_4:-70011645 | None:intergenic |
| TATTAGACATCATGGTTGCA+TGG | 0.573097 | 1_4:-70013229 | None:intergenic |
| CACAGCCTGCATTTGATGAG+TGG | 0.582202 | 1_4:-70011384 | None:intergenic |
| TTGCCTTCCACTTTGTACAA+GGG | 0.582360 | 1_4:-70014552 | None:intergenic |
| TGGTGCAGAACTCCCTATTG+AGG | 0.586537 | 1_4:+70012364 | Msa0181780:CDS |
| TCACCTTGTCTCCACCGAGT+TGG | 0.589561 | 1_4:+70011631 | Msa0181780:CDS |
| GTAATGTTTCTGGTGGAATG+TGG | 0.589846 | 1_4:+70009837 | Msa0181780:CDS |
| TCAGATACCTCTGCTCTGGT+TGG | 0.594373 | 1_4:-70012612 | None:intergenic |
| AATACTTGGCCAATATTAGG+TGG | 0.594417 | 1_4:-70013038 | None:intergenic |
| CCATATGCAGAAGAATGGAA+TGG | 0.594857 | 1_4:+70014508 | Msa0181780:intron |
| GTACTTCTAAGAGTATATGT+AGG | 0.595611 | 1_4:-70014654 | None:intergenic |
| AATTACCTGCAACAAATCCA+AGG | 0.595893 | 1_4:-70014124 | None:intergenic |
| CTTTCTGGAGAAACCGCACA+TGG | 0.596303 | 1_4:+70012675 | Msa0181780:CDS |
| CAAGTTGGTAATGTTTCTGG+TGG | 0.597270 | 1_4:+70009830 | Msa0181780:CDS |
| ATCACATTCAGCCATATCCC+GGG | 0.597588 | 1_4:+70014887 | Msa0181780:three_prime_UTR |
| ATAAGGATATGCCGTAGCAT+GGG | 0.599769 | 1_4:+70012534 | Msa0181780:CDS |
| ATTTACTTACTTTCCATGTG+CGG | 0.600701 | 1_4:-70012688 | None:intergenic |
| AATTATTACTGCATCTGATG+GGG | 0.603859 | 1_4:+70011468 | Msa0181780:CDS |
| TAGCCCTTGTACAAAGTGGA+AGG | 0.605384 | 1_4:+70014549 | Msa0181780:CDS |
| GACAACAGTTGATGTTCCAA+GGG | 0.606897 | 1_4:-70013252 | None:intergenic |
| ATGCAAACATCTCGCTCATG+TGG | 0.611672 | 1_4:-70013205 | None:intergenic |
| CCTGAATATTGTGAGTGGAA+TGG | 0.615998 | 1_4:-70014589 | None:intergenic |
| AGAGTATATGTAGGCCTCAG+AGG | 0.616148 | 1_4:-70014645 | None:intergenic |
| GCTGTTCGAGAAGGTTCCGA+TGG | 0.616692 | 1_4:+70012645 | Msa0181780:CDS |
| CAGAAGCCGCTTTACCAAGT+GGG | 0.616792 | 1_4:+70013009 | Msa0181780:CDS |
| TTGTGGTGTATAGATTGAGG+CGG | 0.618279 | 1_4:+70009781 | Msa0181780:intron |
| TGCAGAACTCCCTATTGAGG+AGG | 0.618747 | 1_4:+70012367 | Msa0181780:CDS |
| ATGGAGGAGAGCTCGCGTCA+CGG | 0.623292 | 1_4:+70010958 | Msa0181780:CDS |
| GTCTAGGCTATGGTTGCAAG+AGG | 0.623939 | 1_4:+70012335 | Msa0181780:intron |
| GCTCCAACTCGGTGGAGACA+AGG | 0.624164 | 1_4:-70011634 | None:intergenic |
| CATCTGCCCACTTGGTAAAG+CGG | 0.628930 | 1_4:-70013015 | None:intergenic |
| TGTCTTGGACTTAACCAAGA+AGG | 0.629593 | 1_4:-70010907 | None:intergenic |
| GTGAAATGCGAAGTTATCGA+TGG | 0.631985 | 1_4:+70010939 | Msa0181780:CDS |
| GGTTGAAACTTAATTTGTGG+CGG | 0.634449 | 1_4:-70014624 | None:intergenic |
| TTGTCTCCACCGAGTTGGAG+CGG | 0.641457 | 1_4:+70011636 | Msa0181780:CDS |
| CCCCACGCCAACCAGAGCAG+AGG | 0.642045 | 1_4:+70012605 | Msa0181780:CDS |
| CCTCTGCTCTGGTTGGCGTG+GGG | 0.646850 | 1_4:-70012605 | None:intergenic |
| ACAGAAGCCGCTTTACCAAG+TGG | 0.649319 | 1_4:+70013008 | Msa0181780:CDS |
| AAATGCGAAGTTATCGATGG+AGG | 0.652757 | 1_4:+70010942 | Msa0181780:CDS |
| CTTGGTTAAGTCCAAGACAG+CGG | 0.652841 | 1_4:+70010911 | Msa0181780:CDS |
| AAATTAAGTTTCAACCTCTG+AGG | 0.664431 | 1_4:+70014631 | Msa0181780:exon |
| GCTCGCATGAATATGTCTCA+TGG | 0.665471 | 1_4:+70009965 | Msa0181780:CDS |
| TGGAATGTGGTCTAAGCCAA+TGG | 0.668652 | 1_4:+70009850 | Msa0181780:CDS |
| TTTGTACCGCTCCAACTCGG+TGG | 0.672762 | 1_4:-70011642 | None:intergenic |
| GTGGAAGGCAACCTATATGG+AGG | 0.675974 | 1_4:+70014564 | Msa0181780:CDS |
| AATGATTTGGAAACTTGCTG+AGG | 0.679513 | 1_4:+70009928 | Msa0181780:CDS |
| TCGGACCTGAATATTGTGAG+TGG | 0.700079 | 1_4:-70014594 | None:intergenic |
| GCAGGAAAAGGGTACAACAG+AGG | 0.715152 | 1_4:+70014028 | Msa0181780:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAAAAAAAATTTA+CGG | + | chr1_4:70013903-70013922 | Msa0181780:intron | 0.0% |
| !! | ACAAATAAAATTTAATGAAA+AGG | - | chr1_4:70010100-70010119 | None:intergenic | 10.0% |
| !!! | TTTCATTAAATTTTATTTGT+TGG | + | chr1_4:70010100-70010119 | Msa0181780:intron | 10.0% |
| !! | ATTTATATTTATATAAGTCT+AGG | - | chr1_4:70011903-70011922 | None:intergenic | 10.0% |
| !! | TAACCAAAAAATAAAATTAT+AGG | - | chr1_4:70011987-70012006 | None:intergenic | 10.0% |
| !! | CAATTGTAAATATAATAATT+TGG | + | chr1_4:70012437-70012456 | Msa0181780:intron | 10.0% |
| !! | AAAAAAAAAAATATTTACAG+GGG | - | chr1_4:70013737-70013756 | None:intergenic | 10.0% |
| !! | TTTCTTGAAAAAAAAAAAAT+CGG | - | chr1_4:70013820-70013839 | None:intergenic | 10.0% |
| !!! | AAAACAATTTTTTTTTACAA+GGG | + | chr1_4:70013876-70013895 | Msa0181780:intron | 10.0% |
| !! | TAAAAAAAAAAAAATTTACG+GGG | + | chr1_4:70013905-70013924 | Msa0181780:intron | 10.0% |
| !! | TTTAATGAAAAGGAAAAAAA+AGG | - | chr1_4:70010090-70010109 | None:intergenic | 15.0% |
| !!! | TTTATTTTTCTCTGTTTTTT+AGG | + | chr1_4:70010172-70010191 | Msa0181780:intron | 15.0% |
| !!! | TTATTTTTCTCTGTTTTTTA+GGG | + | chr1_4:70010173-70010192 | Msa0181780:intron | 15.0% |
| !! | AATAAGAAATTATCAAGAAT+GGG | - | chr1_4:70011054-70011073 | None:intergenic | 15.0% |
| !! | TAATAAGAAATTATCAAGAA+TGG | - | chr1_4:70011055-70011074 | None:intergenic | 15.0% |
| !! | AACAAATTAATGAAATAATG+CGG | - | chr1_4:70011507-70011526 | None:intergenic | 15.0% |
| !! | ATAAATTGTTATGACTTATA+TGG | + | chr1_4:70011921-70011940 | Msa0181780:intron | 15.0% |
| !! | TAAATTGTTATGACTTATAT+GGG | + | chr1_4:70011922-70011941 | Msa0181780:intron | 15.0% |
| !! | AAAAATAAAATTATAGGTCT+AGG | - | chr1_4:70011981-70012000 | None:intergenic | 15.0% |
| !!! | AGACCTATAATTTTATTTTT+TGG | + | chr1_4:70011981-70012000 | Msa0181780:intron | 15.0% |
| !!! | TTATAAGTTTTTTTGATGAA+AGG | + | chr1_4:70012094-70012113 | Msa0181780:intron | 15.0% |
| !!! | TTTTTATAATTTTGTCTGTT+TGG | + | chr1_4:70012133-70012152 | Msa0181780:intron | 15.0% |
| !!! | TAGTCTTACTTTTTTTTTTT+TGG | + | chr1_4:70013523-70013542 | Msa0181780:intron | 15.0% |
| !!! | AGTCTTACTTTTTTTTTTTT+GGG | + | chr1_4:70013524-70013543 | Msa0181780:intron | 15.0% |
| !! | TTAACCCTATAAATTATAAT+AGG | - | chr1_4:70013672-70013691 | None:intergenic | 15.0% |
| !! | TTATAATTTATAGGGTTAAT+AGG | + | chr1_4:70013673-70013692 | Msa0181780:intron | 15.0% |
| !! | AAAAAAAAAATATTTACAGG+GGG | - | chr1_4:70013736-70013755 | None:intergenic | 15.0% |
| !!! | AAAACAAATTTTTTTTACAG+GGG | - | chr1_4:70013767-70013786 | None:intergenic | 15.0% |
| !!! | CAAAACAAATTTTTTTTACA+GGG | - | chr1_4:70013768-70013787 | None:intergenic | 15.0% |
| !!! | TCAAAACAAATTTTTTTTAC+AGG | - | chr1_4:70013769-70013788 | None:intergenic | 15.0% |
| !!! | CAAAACAATTTTTTTTTACA+AGG | + | chr1_4:70013875-70013894 | Msa0181780:intron | 15.0% |
| !!! | AAACAATTTTTTTTTACAAG+GGG | + | chr1_4:70013877-70013896 | Msa0181780:intron | 15.0% |
| !! | AAAAAAAAAAAAATTTACGG+GGG | + | chr1_4:70013906-70013925 | Msa0181780:intron | 15.0% |
| !! | AATTTAACAAATAACAGTTA+TGG | + | chr1_4:70014197-70014216 | Msa0181780:intron | 15.0% |
| !! | TGAACAAACTAAAATTAAAA+TGG | - | chr1_4:70014470-70014489 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTTTTGCTTCAT+AGG | + | chr1_4:70014722-70014741 | Msa0181780:three_prime_UTR | 15.0% |
| !! | TTCATAAGGAAAAAAAATGA+TGG | + | chr1_4:70009697-70009716 | Msa0181780:intron | 20.0% |
| !! | TCATAAGGAAAAAAAATGAT+GGG | + | chr1_4:70009698-70009717 | Msa0181780:intron | 20.0% |
| !!! | AGTGAGAAAATTTGATTTTT+AGG | + | chr1_4:70009723-70009742 | Msa0181780:intron | 20.0% |
| !!! | TCATAAGAAAGTTATTGATT+TGG | + | chr1_4:70010000-70010019 | Msa0181780:CDS | 20.0% |
| !! | ACAAATTAATGAAATAATGC+GGG | - | chr1_4:70011506-70011525 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAAAGACTTATG+TGG | + | chr1_4:70011954-70011973 | Msa0181780:intron | 20.0% |
| !! | AAAAGAAAAAAGACTTATGT+GGG | + | chr1_4:70011955-70011974 | Msa0181780:intron | 20.0% |
| !! | AACTGAAATTGAAGAAATAT+CGG | - | chr1_4:70012786-70012805 | None:intergenic | 20.0% |
| !! | CTTAGAAAGGAATATAAATA+TGG | + | chr1_4:70012806-70012825 | Msa0181780:intron | 20.0% |
| !! | TATGGTATTTATTATATTGC+AGG | + | chr1_4:70012940-70012959 | Msa0181780:intron | 20.0% |
| !!! | GAAATGTGATTTATTCTTTT+TGG | + | chr1_4:70013172-70013191 | Msa0181780:intron | 20.0% |
| !!! | GTCTTACTTTTTTTTTTTTG+GGG | + | chr1_4:70013525-70013544 | Msa0181780:intron | 20.0% |
| !! | ACAAAATAAATTGAACTGAT+CGG | - | chr1_4:70013607-70013626 | None:intergenic | 20.0% |
| !! | TGCACCTATTATAATTTATA+GGG | + | chr1_4:70013665-70013684 | Msa0181780:intron | 20.0% |
| !! | AAAAAAAAATATTTACAGGG+GGG | - | chr1_4:70013735-70013754 | None:intergenic | 20.0% |
| !!! | AAACAAATTTTTTTTACAGG+GGG | - | chr1_4:70013766-70013785 | None:intergenic | 20.0% |
| !!! | AAAAAAAATCGGTTTTTGTT+TGG | - | chr1_4:70013809-70013828 | None:intergenic | 20.0% |
| !!! | AAGAAATTTTCGTTTTTGTT+TGG | + | chr1_4:70013834-70013853 | Msa0181780:intron | 20.0% |
| !!! | AACAATTTTTTTTTACAAGG+GGG | + | chr1_4:70013878-70013897 | Msa0181780:intron | 20.0% |
| !! | AAAAAAAAAAAATTTACGGG+GGG | + | chr1_4:70013907-70013926 | Msa0181780:intron | 20.0% |
| !! | AGTTATAAATTAGGGTTAAT+AGG | - | chr1_4:70013971-70013990 | None:intergenic | 20.0% |
| !! | GTCGTTATAGTTATAAATTA+GGG | - | chr1_4:70013979-70013998 | None:intergenic | 20.0% |
| !! | AGTCGTTATAGTTATAAATT+AGG | - | chr1_4:70013980-70013999 | None:intergenic | 20.0% |
| !! | TTTGGAAGATATCTTTAATA+TGG | + | chr1_4:70014147-70014166 | Msa0181780:intron | 20.0% |
| !! | TTGGAAGATATCTTTAATAT+GGG | + | chr1_4:70014148-70014167 | Msa0181780:intron | 20.0% |
| !!! | TTAAATTAGAAGTACTATGT+AGG | - | chr1_4:70014184-70014203 | None:intergenic | 20.0% |
| !! | TTTCCTCTCATATTATTATT+TGG | + | chr1_4:70014239-70014258 | Msa0181780:intron | 20.0% |
| !! | AGAAAAACAATAATGAAAAC+AGG | - | chr1_4:70014776-70014795 | None:intergenic | 20.0% |
| ! | ACTAAGATTGTTTGTACTAT+TGG | + | chr1_4:70009884-70009903 | Msa0181780:CDS | 25.0% |
| ! | ATTTCCTTTGTATTAGTAGA+AGG | - | chr1_4:70009911-70009930 | None:intergenic | 25.0% |
| ! | CTAATACAAAGGAAATGATT+TGG | + | chr1_4:70009915-70009934 | Msa0181780:CDS | 25.0% |
| !!! | GAAAGTTATTGATTTGGTTA+AGG | + | chr1_4:70010006-70010025 | Msa0181780:CDS | 25.0% |
| !! | CTTTTCTGCAACAAATTAAA+AGG | - | chr1_4:70011167-70011186 | None:intergenic | 25.0% |
| !!! | CTTTTAATTTGTTGCAGAAA+AGG | + | chr1_4:70011165-70011184 | Msa0181780:intron | 25.0% |
| ! | GTAATAATTGAATGCAAGTT+CGG | - | chr1_4:70011457-70011476 | None:intergenic | 25.0% |
| ! | TTAGTGGAAAAGACTTATTT+GGG | + | chr1_4:70011877-70011896 | Msa0181780:intron | 25.0% |
| !! | TATAATTTTGTCTGTTTGGT+AGG | + | chr1_4:70012137-70012156 | Msa0181780:intron | 25.0% |
| !!! | TTTTATGTTTCTACTACACA+TGG | - | chr1_4:70012245-70012264 | None:intergenic | 25.0% |
| ! | ACTATGCATTGAAGAAATAT+CGG | - | chr1_4:70012751-70012770 | None:intergenic | 25.0% |
| ! | TTCAATTTCAGTTCTTAGAA+AGG | + | chr1_4:70012793-70012812 | Msa0181780:intron | 25.0% |
| !!! | TAGTCATCTTCTATTTTAAG+AGG | - | chr1_4:70013391-70013410 | None:intergenic | 25.0% |
| ! | ATAATCTCTCAAACATACTT+AGG | - | chr1_4:70013456-70013475 | None:intergenic | 25.0% |
| !!! | AGATTATTCTGAAACGTATT+GGG | + | chr1_4:70013469-70013488 | Msa0181780:intron | 25.0% |
| !! | AAAAGTAAGACTAGTTATTG+AGG | - | chr1_4:70013516-70013535 | None:intergenic | 25.0% |
| !!! | TACTTTTTTTTTTTTGGGGT+TGG | + | chr1_4:70013529-70013548 | Msa0181780:intron | 25.0% |
| ! | CTGCACCTATTATAATTTAT+AGG | + | chr1_4:70013664-70013683 | Msa0181780:intron | 25.0% |
| ! | AAAAAAAATATTTACAGGGG+GGG | - | chr1_4:70013734-70013753 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAATTTACGGGG+GGG | + | chr1_4:70013908-70013927 | Msa0181780:intron | 25.0% |
| !! | CTTTGATGTTTACCTAATTT+TGG | + | chr1_4:70013998-70014017 | Msa0181780:intron | 25.0% |
| ! | AAGCCAAATAATAATATGAG+AGG | - | chr1_4:70014245-70014264 | None:intergenic | 25.0% |
| ! | CTAAGTTCATAAATGTGTAA+AGG | - | chr1_4:70014334-70014353 | None:intergenic | 25.0% |
| ! | AATTAGAACTGAACTCTAAT+AGG | + | chr1_4:70014424-70014443 | Msa0181780:intron | 25.0% |
| ! | AAATAACCAAAATGCAAGAT+TGG | - | chr1_4:70014705-70014724 | None:intergenic | 25.0% |
| ! | GGTTCAATATTTAGTTAGAA+TGG | + | chr1_4:70014813-70014832 | Msa0181780:three_prime_UTR | 25.0% |
| GCGAAATAAGAATAAGAGAT+GGG | - | chr1_4:70009664-70009683 | None:intergenic | 30.0% | |
| AGCGAAATAAGAATAAGAGA+TGG | - | chr1_4:70009665-70009684 | None:intergenic | 30.0% | |
| ! | CTTCTGTTTCTTGTTTCATA+AGG | + | chr1_4:70009683-70009702 | Msa0181780:intron | 30.0% |
| ATACACCACAAAAACCAAAA+GGG | - | chr1_4:70009772-70009791 | None:intergenic | 30.0% | |
| TATACACCACAAAAACCAAA+AGG | - | chr1_4:70009773-70009792 | None:intergenic | 30.0% | |
| ! | TTTTTGTGGTGTATAGATTG+AGG | + | chr1_4:70009778-70009797 | Msa0181780:intron | 30.0% |
| ! | TTACATGTTTTGCAACAAGT+TGG | + | chr1_4:70009815-70009834 | Msa0181780:CDS | 30.0% |
| ! | TTAGTCTTTCTTCTAACCAT+TGG | - | chr1_4:70009869-70009888 | None:intergenic | 30.0% |
| !! | GTTTTTAACAAGATTGGTTG+TGG | - | chr1_4:70010224-70010243 | None:intergenic | 30.0% |
| CAACCAATCTTGTTAAAAAC+TGG | + | chr1_4:70010224-70010243 | Msa0181780:CDS | 30.0% | |
| TTTGTCAATGATGTTGAAGA+AGG | + | chr1_4:70010317-70010336 | Msa0181780:CDS | 30.0% | |
| TTGTCAATGATGTTGAAGAA+GGG | + | chr1_4:70010318-70010337 | Msa0181780:CDS | 30.0% | |
| GTGCTAAATGATTGATGAAT+CGG | + | chr1_4:70010415-70010434 | Msa0181780:intron | 30.0% | |
| ! | CTGTTGTCATTTGTGAATTA+CGG | + | chr1_4:70010536-70010555 | Msa0181780:intron | 30.0% |
| GATAACACTCTGTACTAAAT+AGG | + | chr1_4:70010623-70010642 | Msa0181780:intron | 30.0% | |
| CTGTACTAAATAGGTTATTG+TGG | + | chr1_4:70010632-70010651 | Msa0181780:intron | 30.0% | |
| !! | ATTTGACAACATTGATTCCA+AGG | + | chr1_4:70010708-70010727 | Msa0181780:intron | 30.0% |
| ! | AGCTTTGACATTCTTATTGT+TGG | + | chr1_4:70010771-70010790 | Msa0181780:intron | 30.0% |
| GTCAATTTCCTATTTATCTC+TGG | + | chr1_4:70010802-70010821 | Msa0181780:intron | 30.0% | |
| AGTCAGAAATTCACATAAGA+TGG | - | chr1_4:70010858-70010877 | None:intergenic | 30.0% | |
| !! | AATTTGTTGCAGAAAAGGAT+TGG | + | chr1_4:70011170-70011189 | Msa0181780:intron | 30.0% |
| ! | ATTTGTTGCAGAAAAGGATT+GGG | + | chr1_4:70011171-70011190 | Msa0181780:intron | 30.0% |
| TCAATTATTACTGCATCTGA+TGG | + | chr1_4:70011466-70011485 | Msa0181780:CDS | 30.0% | |
| CAATTATTACTGCATCTGAT+GGG | + | chr1_4:70011467-70011486 | Msa0181780:CDS | 30.0% | |
| AATTATTACTGCATCTGATG+GGG | + | chr1_4:70011468-70011487 | Msa0181780:CDS | 30.0% | |
| TAATGAAATAATGCGGGATT+AGG | - | chr1_4:70011500-70011519 | None:intergenic | 30.0% | |
| !! | TCATTAATTTGTTGCCTAAC+TGG | + | chr1_4:70011514-70011533 | Msa0181780:intron | 30.0% |
| GTTAGTGGAAAAGACTTATT+TGG | + | chr1_4:70011876-70011895 | Msa0181780:intron | 30.0% | |
| !!! | TTTTGTTCACTGATTTACTC+TGG | + | chr1_4:70012284-70012303 | Msa0181780:intron | 30.0% |
| ! | AACAATTTTACCTGCAAAAG+CGG | - | chr1_4:70012395-70012414 | None:intergenic | 30.0% |
| !!! | TTTGGTGTTTTTTCGATAAC+TGG | + | chr1_4:70012455-70012474 | Msa0181780:intron | 30.0% |
| CATATTTGTGGCTACAATAA+CGG | - | chr1_4:70012565-70012584 | None:intergenic | 30.0% | |
| ATTTACTTACTTTCCATGTG+CGG | - | chr1_4:70012691-70012710 | None:intergenic | 30.0% | |
| TACAGAAAGCGACAATAATA+TGG | + | chr1_4:70012922-70012941 | Msa0181780:intron | 30.0% | |
| ! | ATTACTTTCGCAGCTTTAAT+TGG | - | chr1_4:70012969-70012988 | None:intergenic | 30.0% |
| TTGAATACTTGGCCAATATT+AGG | - | chr1_4:70013044-70013063 | None:intergenic | 30.0% | |
| TAATATTGGCCAAGTATTCA+AGG | + | chr1_4:70013043-70013062 | Msa0181780:CDS | 30.0% | |
| AAGTTTAGACCTTGAATACT+TGG | - | chr1_4:70013055-70013074 | None:intergenic | 30.0% | |
| !! | AACTACCCTCATTTTAATGT+CGG | + | chr1_4:70013121-70013140 | Msa0181780:intron | 30.0% |
| CGGCAATGAATAAAATATTC+CGG | + | chr1_4:70013141-70013160 | Msa0181780:intron | 30.0% | |
| CTGATCAGTAAAAGCAAATA+TGG | - | chr1_4:70013333-70013352 | None:intergenic | 30.0% | |
| !! | GAGATTATTCTGAAACGTAT+TGG | + | chr1_4:70013468-70013487 | Msa0181780:intron | 30.0% |
| !! | GATTATTCTGAAACGTATTG+GGG | + | chr1_4:70013470-70013489 | Msa0181780:intron | 30.0% |
| ATTGAACTGATCGGTTAATA+AGG | - | chr1_4:70013598-70013617 | None:intergenic | 30.0% | |
| ! | TGATGTTTACCTAATTTTGG+TGG | + | chr1_4:70014001-70014020 | Msa0181780:intron | 30.0% |
| TCAGAGAATTCCATGTAAAT+AGG | - | chr1_4:70014078-70014097 | None:intergenic | 30.0% | |
| !!! | GATTTGTTGCAGGTAATTTT+TGG | + | chr1_4:70014129-70014148 | Msa0181780:intron | 30.0% |
| TCGAACATTTAACCATGTAT+AGG | + | chr1_4:70014270-70014289 | Msa0181780:intron | 30.0% | |
| ! | AACTCAGTTGACATTTTCAT+TGG | - | chr1_4:70014395-70014414 | None:intergenic | 30.0% |
| ! | TAATAGGACTTGCTTAAACA+AGG | + | chr1_4:70014440-70014459 | Msa0181780:intron | 30.0% |
| AAGAATGGAATGGTTAAAGA+AGG | + | chr1_4:70014518-70014537 | Msa0181780:CDS | 30.0% | |
| ! | AGAGGTTGAAACTTAATTTG+TGG | - | chr1_4:70014630-70014649 | None:intergenic | 30.0% |
| AAATTAAGTTTCAACCTCTG+AGG | + | chr1_4:70014631-70014650 | Msa0181780:exon | 30.0% | |
| ! | GTACTTCTAAGAGTATATGT+AGG | - | chr1_4:70014657-70014676 | None:intergenic | 30.0% |
| ! | TTGATACCAATCTTGCATTT+TGG | + | chr1_4:70014696-70014715 | Msa0181780:three_prime_UTR | 30.0% |
| TTCTTCTGTAAACTCTTCTA+TGG | + | chr1_4:70014792-70014811 | Msa0181780:three_prime_UTR | 30.0% | |
| CATATGTTAGTTCATGTCAT+TGG | + | chr1_4:70014837-70014856 | Msa0181780:three_prime_UTR | 30.0% | |
| TCACATGATAATAGTACTCA+AGG | - | chr1_4:70014954-70014973 | None:intergenic | 30.0% | |
| ! | GAAAATTGTTGTGACCCTTT+TGG | + | chr1_4:70009755-70009774 | Msa0181780:intron | 35.0% |
| !! | CAACAAGTTGGTAATGTTTC+TGG | + | chr1_4:70009827-70009846 | Msa0181780:CDS | 35.0% |
| TGGTCCTTCTACTAATACAA+AGG | + | chr1_4:70009904-70009923 | Msa0181780:CDS | 35.0% | |
| !! | AATGATTTGGAAACTTGCTG+AGG | + | chr1_4:70009928-70009947 | Msa0181780:CDS | 35.0% |
| AGGAAAAAAAAGGCTTACCT+TGG | - | chr1_4:70010080-70010099 | None:intergenic | 35.0% | |
| GTTGGTATGATGATATCTTC+AGG | + | chr1_4:70010118-70010137 | Msa0181780:intron | 35.0% | |
| TGATGATATCTTCAGGATCA+CGG | + | chr1_4:70010125-70010144 | Msa0181780:intron | 35.0% | |
| ! | TGGCCAGTTTTTAACAAGAT+TGG | - | chr1_4:70010230-70010249 | None:intergenic | 35.0% |
| AATCTTGTTAAAAACTGGCC+AGG | + | chr1_4:70010229-70010248 | Msa0181780:CDS | 35.0% | |
| GGATAGTAAAAGTGAATTCC+TGG | - | chr1_4:70010250-70010269 | None:intergenic | 35.0% | |
| !! | TTCACTTTTACTATCCAGAG+TGG | + | chr1_4:70010254-70010273 | Msa0181780:CDS | 35.0% |
| TGTCAATGATGTTGAAGAAG+GGG | + | chr1_4:70010319-70010338 | Msa0181780:CDS | 35.0% | |
| TTAAATATTGTCTGCTGCCA+AGG | + | chr1_4:70010483-70010502 | Msa0181780:intron | 35.0% | |
| TAAATATTGTCTGCTGCCAA+GGG | + | chr1_4:70010484-70010503 | Msa0181780:intron | 35.0% | |
| TGACTCTTGATGTATGATGT+AGG | + | chr1_4:70010873-70010892 | Msa0181780:intron | 35.0% | |
| ATCGATAACTTCGCATTTCA+CGG | - | chr1_4:70010940-70010959 | None:intergenic | 35.0% | |
| AAAGTCTAACCAGTGATTGA+AGG | - | chr1_4:70011020-70011039 | None:intergenic | 35.0% | |
| ! | TTCAATCACTGGTTAGACTT+TGG | + | chr1_4:70011019-70011038 | Msa0181780:intron | 35.0% |
| ! | TTTTTCGTCTTCTCTGTATG+TGG | + | chr1_4:70011086-70011105 | Msa0181780:intron | 35.0% |
| ! | TTTTCGTCTTCTCTGTATGT+GGG | + | chr1_4:70011087-70011106 | Msa0181780:intron | 35.0% |
| !! | TAAGGTTATGTTGGTTTCCA+AGG | + | chr1_4:70011130-70011149 | Msa0181780:intron | 35.0% |
| GATTGGGATGACATCAAATT+TGG | + | chr1_4:70011187-70011206 | Msa0181780:CDS | 35.0% | |
| TGCATCCTTAACGAAAGAAA+CGG | - | chr1_4:70011239-70011258 | None:intergenic | 35.0% | |
| CAATCAAGCAAACTAATCAG+TGG | - | chr1_4:70011345-70011364 | None:intergenic | 35.0% | |
| TTATGATGAAGGAGAAGACT+AGG | + | chr1_4:70011843-70011862 | Msa0181780:intron | 35.0% | |
| GATCTCACTAAAGATAGTTG+GGG | - | chr1_4:70012209-70012228 | None:intergenic | 35.0% | |
| GGATCTCACTAAAGATAGTT+GGG | - | chr1_4:70012210-70012229 | None:intergenic | 35.0% | |
| TACACATGGTTGTCAAAATC+GGG | - | chr1_4:70012231-70012250 | None:intergenic | 35.0% | |
| CTACACATGGTTGTCAAAAT+CGG | - | chr1_4:70012232-70012251 | None:intergenic | 35.0% | |
| CTTATTATCTCTTCCTGCAT+TGG | - | chr1_4:70012519-70012538 | None:intergenic | 35.0% | |
| CAATGCAGGAAGAGATAATA+AGG | + | chr1_4:70012517-70012536 | Msa0181780:intron | 35.0% | |
| TATTGTAGCCACAAATATGC+TGG | + | chr1_4:70012566-70012585 | Msa0181780:CDS | 35.0% | |
| CATACTTTCCAGCATATTTG+TGG | - | chr1_4:70012577-70012596 | None:intergenic | 35.0% | |
| !! | TCCAGAAAGCATTATTCCAT+CGG | - | chr1_4:70012664-70012683 | None:intergenic | 35.0% |
| TAACTATGCACATTGAGATG+TGG | - | chr1_4:70012718-70012737 | None:intergenic | 35.0% | |
| ! | AAGACGAATCTAAAGCAAGA+GGG | + | chr1_4:70012897-70012916 | Msa0181780:intron | 35.0% |
| AATACTTGGCCAATATTAGG+TGG | - | chr1_4:70013041-70013060 | None:intergenic | 35.0% | |
| CATTGCCGACATTAAAATGA+GGG | - | chr1_4:70013129-70013148 | None:intergenic | 35.0% | |
| TCATTGCCGACATTAAAATG+AGG | - | chr1_4:70013130-70013149 | None:intergenic | 35.0% | |
| AATCACATTTCAGTGTCAAC+CGG | - | chr1_4:70013163-70013182 | None:intergenic | 35.0% | |
| TATTAGACATCATGGTTGCA+TGG | - | chr1_4:70013232-70013251 | None:intergenic | 35.0% | |
| AACTGTTGTCTTCACTAGAT+CGG | + | chr1_4:70013265-70013284 | Msa0181780:CDS | 35.0% | |
| GGTTTAAGCAACAAGAGAAA+GGG | - | chr1_4:70013370-70013389 | None:intergenic | 35.0% | |
| AGGTTTAAGCAACAAGAGAA+AGG | - | chr1_4:70013371-70013390 | None:intergenic | 35.0% | |
| ACGTATTGGGGTAAATTGTT+TGG | + | chr1_4:70013482-70013501 | Msa0181780:intron | 35.0% | |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | + | chr1_4:70013783-70013802 | Msa0181780:intron | 35.0% |
| !! | TTTTTGTTTGGCCTATTAGG+GGG | - | chr1_4:70013846-70013865 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | - | chr1_4:70013845-70013864 | None:intergenic | 35.0% |
| !! | GGTTTTTGTTTGGCCTATTA+GGG | - | chr1_4:70013799-70013818 | None:intergenic | 35.0% |
| !! | TCGTTTTTGTTTGGCCTATT+AGG | + | chr1_4:70013843-70013862 | Msa0181780:intron | 35.0% |
| !! | CGTTTTTGTTTGGCCTATTA+GGG | + | chr1_4:70013844-70013863 | Msa0181780:intron | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | + | chr1_4:70013845-70013864 | Msa0181780:intron | 35.0% |
| !! | TTTTTGTTTGGCCTATTAGG+GGG | + | chr1_4:70013846-70013865 | Msa0181780:intron | 35.0% |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | - | chr1_4:70013783-70013802 | None:intergenic | 35.0% |
| CCTGTAATATAGGTCATTTC+CGG | - | chr1_4:70013938-70013957 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | + | chr1_4:70013936-70013955 | Msa0181780:intron | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | + | chr1_4:70013937-70013956 | Msa0181780:intron | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | + | chr1_4:70013938-70013957 | Msa0181780:intron | 35.0% | |
| AAATGACCTATATTACAGGG+GGG | + | chr1_4:70013939-70013958 | Msa0181780:intron | 35.0% | |
| AATTACCTGCAACAAATCCA+AGG | - | chr1_4:70014127-70014146 | None:intergenic | 35.0% | |
| TGCATGAATGAACCTATACA+TGG | - | chr1_4:70014285-70014304 | None:intergenic | 35.0% | |
| TATAGGTTCATTCATGCATG+CGG | + | chr1_4:70014287-70014306 | Msa0181780:intron | 35.0% | |
| CATAAATGTGTAAAGGTCGA+TGG | - | chr1_4:70014327-70014346 | None:intergenic | 35.0% | |
| TGTTTCCATATGCAGAAGAA+TGG | + | chr1_4:70014503-70014522 | Msa0181780:intron | 35.0% | |
| !! | GGTTGAAACTTAATTTGTGG+CGG | - | chr1_4:70014627-70014646 | None:intergenic | 35.0% |
| !! | AGAAGTACACATCCTCTTTT+TGG | + | chr1_4:70014669-70014688 | Msa0181780:three_prime_UTR | 35.0% |
| AAGCTAAATATAACAGTCCC+GGG | - | chr1_4:70014907-70014926 | None:intergenic | 35.0% | |
| CAAGCTAAATATAACAGTCC+CGG | - | chr1_4:70014908-70014927 | None:intergenic | 35.0% | |
| !!! | TGTGACCCTTTTGGTTTTTG+TGG | + | chr1_4:70009764-70009783 | Msa0181780:intron | 40.0% |
| TTGTGGTGTATAGATTGAGG+CGG | + | chr1_4:70009781-70009800 | Msa0181780:intron | 40.0% | |
| !! | CAAGTTGGTAATGTTTCTGG+TGG | + | chr1_4:70009830-70009849 | Msa0181780:CDS | 40.0% |
| !! | GTAATGTTTCTGGTGGAATG+TGG | + | chr1_4:70009837-70009856 | Msa0181780:CDS | 40.0% |
| TGCAATTATGCTTGACACCA+AGG | + | chr1_4:70010060-70010079 | Msa0181780:CDS | 40.0% | |
| TATCTTCAGGATCACGGTAT+CGG | + | chr1_4:70010131-70010150 | Msa0181780:intron | 40.0% | |
| !!! | TTTTTTAGGGTCCTGAGGTT+AGG | + | chr1_4:70010186-70010205 | Msa0181780:intron | 40.0% |
| AAATATTGTCTGCTGCCAAG+GGG | + | chr1_4:70010485-70010504 | Msa0181780:intron | 40.0% | |
| CATTTGTGAATTACGGATCG+CGG | + | chr1_4:70010543-70010562 | Msa0181780:intron | 40.0% | |
| TCACGCTTCCAGAGATAAAT+AGG | - | chr1_4:70010813-70010832 | None:intergenic | 40.0% | |
| AGCACCAAGTCTTTGATTGT+AGG | + | chr1_4:70010832-70010851 | Msa0181780:intron | 40.0% | |
| ATGGCCTACAATCAAAGACT+TGG | - | chr1_4:70010839-70010858 | None:intergenic | 40.0% | |
| CTCTTGATGTATGATGTAGG+TGG | + | chr1_4:70010876-70010895 | Msa0181780:intron | 40.0% | |
| TGTCTTGGACTTAACCAAGA+AGG | - | chr1_4:70010910-70010929 | None:intergenic | 40.0% | |
| GTGAAATGCGAAGTTATCGA+TGG | + | chr1_4:70010939-70010958 | Msa0181780:CDS | 40.0% | |
| AAATGCGAAGTTATCGATGG+AGG | + | chr1_4:70010942-70010961 | Msa0181780:CDS | 40.0% | |
| CGGAGACATTTGAATGTTAG+AGG | + | chr1_4:70010978-70010997 | Msa0181780:CDS | 40.0% | |
| AAAAGGAATGTTATGCGCCT+TGG | - | chr1_4:70011150-70011169 | None:intergenic | 40.0% | |
| ! | CTATGCCGTTTCTTTCGTTA+AGG | + | chr1_4:70011231-70011250 | Msa0181780:CDS | 40.0% |
| CAATTCCACTCATCAAATGC+AGG | + | chr1_4:70011379-70011398 | Msa0181780:CDS | 40.0% | |
| TAAACCCGATTCTCCATATC+AGG | - | chr1_4:70011540-70011559 | None:intergenic | 40.0% | |
| AAGCACATACTGTAGTAGCA+AGG | + | chr1_4:70011562-70011581 | Msa0181780:intron | 40.0% | |
| ACAAAGATCGGAAAAGACGA+CGG | + | chr1_4:70011660-70011679 | Msa0181780:intron | 40.0% | |
| TGATTCGCATCAGAGAAGAA+CGG | + | chr1_4:70011725-70011744 | Msa0181780:intron | 40.0% | |
| CTAGGTCTAGGTTAAGTTAG+TGG | + | chr1_4:70011861-70011880 | Msa0181780:intron | 40.0% | |
| GGGATCTCACTAAAGATAGT+TGG | - | chr1_4:70012211-70012230 | None:intergenic | 40.0% | |
| ACGGGATGGTAAAAGAAAAC+AGG | - | chr1_4:70012317-70012336 | None:intergenic | 40.0% | |
| ! | TTTCTTTTACCATCCCGTCT+AGG | + | chr1_4:70012319-70012338 | Msa0181780:intron | 40.0% |
| AATAAGGATATGCCGTAGCA+TGG | + | chr1_4:70012533-70012552 | Msa0181780:CDS | 40.0% | |
| ATAAGGATATGCCGTAGCAT+GGG | + | chr1_4:70012534-70012553 | Msa0181780:CDS | 40.0% | |
| AATATCAGATACCTCTGCTC+TGG | - | chr1_4:70012619-70012638 | None:intergenic | 40.0% | |
| ! | ATTGCAATTGCTGTTCGAGA+AGG | + | chr1_4:70012636-70012655 | Msa0181780:CDS | 40.0% |
| TCCGATGGAATAATGCTTTC+TGG | + | chr1_4:70012660-70012679 | Msa0181780:CDS | 40.0% | |
| GAAGAAATATCGGCATCTCA+AGG | - | chr1_4:70012741-70012760 | None:intergenic | 40.0% | |
| GAAGAAATATCGGCATGTCA+AGG | - | chr1_4:70012776-70012795 | None:intergenic | 40.0% | |
| ! | GAAGACGAATCTAAAGCAAG+AGG | + | chr1_4:70012896-70012915 | Msa0181780:intron | 40.0% |
| TAATGCACACCGTAGCATTA+CGG | + | chr1_4:70012985-70013004 | Msa0181780:CDS | 40.0% | |
| ACCATGATGTCTAATACCCT+TGG | + | chr1_4:70013236-70013255 | Msa0181780:CDS | 40.0% | |
| !! | TCCAAGGGTATTAGACATCA+TGG | - | chr1_4:70013240-70013259 | None:intergenic | 40.0% |
| ! | GACAACAGTTGATGTTCCAA+GGG | - | chr1_4:70013255-70013274 | None:intergenic | 40.0% |
| ! | AGACAACAGTTGATGTTCCA+AGG | - | chr1_4:70013256-70013275 | None:intergenic | 40.0% |
| ACTGTTGTCTTCACTAGATC+GGG | + | chr1_4:70013266-70013285 | Msa0181780:CDS | 40.0% | |
| TAAGCAACAAGAGAAAGGGA+GGG | - | chr1_4:70013366-70013385 | None:intergenic | 40.0% | |
| TTAAGCAACAAGAGAAAGGG+AGG | - | chr1_4:70013367-70013386 | None:intergenic | 40.0% | |
| ! | GTTTTTACCCCCTGTAATAC+AGG | + | chr1_4:70013695-70013714 | Msa0181780:intron | 40.0% |
| GAAATGACCTGTATTACAGG+GGG | - | chr1_4:70013705-70013724 | None:intergenic | 40.0% | |
| GGAAATGACCTGTATTACAG+GGG | - | chr1_4:70013706-70013725 | None:intergenic | 40.0% | |
| CGGAAATGACCTGTATTACA+GGG | - | chr1_4:70013707-70013726 | None:intergenic | 40.0% | |
| CCTGTAATACAGGTCATTTC+CGG | + | chr1_4:70013705-70013724 | Msa0181780:intron | 40.0% | |
| !! | TTTTGTTTGGCCTATTAGGG+GGG | - | chr1_4:70013847-70013866 | None:intergenic | 40.0% |
| !! | CGGTTTTTGTTTGGCCTATT+AGG | - | chr1_4:70013800-70013819 | None:intergenic | 40.0% |
| !! | TTTTGTTTGGCCTATTAGGG+GGG | + | chr1_4:70013847-70013866 | Msa0181780:intron | 40.0% |
| CCGGAAATGACCTATATTAC+AGG | + | chr1_4:70013935-70013954 | Msa0181780:intron | 40.0% | |
| TCTTTACCCCCCTGTAATAT+AGG | - | chr1_4:70013948-70013967 | None:intergenic | 40.0% | |
| AGGTGTCTGTCCTATTTACA+TGG | + | chr1_4:70014065-70014084 | Msa0181780:CDS | 40.0% | |
| AGAGACATTCACAAAAGCCT+TGG | + | chr1_4:70014107-70014126 | Msa0181780:CDS | 40.0% | |
| !! | AAAAGCCTTGGATTTGTTGC+AGG | + | chr1_4:70014119-70014138 | Msa0181780:CDS | 40.0% |
| ATGCATGCGGTAATTAACCA+CGG | + | chr1_4:70014300-70014319 | Msa0181780:intron | 40.0% | |
| CCATTCCATTCTTCTGCATA+TGG | - | chr1_4:70014511-70014530 | None:intergenic | 40.0% | |
| CCATATGCAGAAGAATGGAA+TGG | + | chr1_4:70014508-70014527 | Msa0181780:intron | 40.0% | |
| TTGCCTTCCACTTTGTACAA+GGG | - | chr1_4:70014555-70014574 | None:intergenic | 40.0% | |
| AAAGTGGAAGGCAACCTATA+TGG | + | chr1_4:70014561-70014580 | Msa0181780:CDS | 40.0% | |
| CCTGAATATTGTGAGTGGAA+TGG | - | chr1_4:70014592-70014611 | None:intergenic | 40.0% | |
| CCATTCCACTCACAATATTC+AGG | + | chr1_4:70014589-70014608 | Msa0181780:CDS | 40.0% | |
| GGTATCAACACACCAAAAAG+AGG | - | chr1_4:70014684-70014703 | None:intergenic | 40.0% | |
| AATCACATTCAGCCATATCC+CGG | + | chr1_4:70014886-70014905 | Msa0181780:three_prime_UTR | 40.0% | |
| AATATAACAGTCCCGGGATA+TGG | - | chr1_4:70014901-70014920 | None:intergenic | 40.0% | |
| TGTATAGATTGAGGCGGAGT+TGG | + | chr1_4:70009787-70009806 | Msa0181780:intron | 45.0% | |
| TGGAATGTGGTCTAAGCCAA+TGG | + | chr1_4:70009850-70009869 | Msa0181780:CDS | 45.0% | |
| !! | ATTTGGAAACTTGCTGAGGC+TGG | + | chr1_4:70009932-70009951 | Msa0181780:CDS | 45.0% |
| GCTCGCATGAATATGTCTCA+TGG | + | chr1_4:70009965-70009984 | Msa0181780:CDS | 45.0% | |
| !!! | CTCTGTTTTTTAGGGTCCTG+AGG | + | chr1_4:70010181-70010200 | Msa0181780:intron | 45.0% |
| TTTACTATCCAGAGTGGCGT+TGG | + | chr1_4:70010260-70010279 | Msa0181780:CDS | 45.0% | |
| CATGCTTCTTGTTGACGGTA+TGG | + | chr1_4:70010343-70010362 | Msa0181780:intron | 45.0% | |
| TGAATCGGCAAACACAAGAG+TGG | + | chr1_4:70010430-70010449 | Msa0181780:intron | 45.0% | |
| AATATTGTCTGCTGCCAAGG+GGG | + | chr1_4:70010486-70010505 | Msa0181780:intron | 45.0% | |
| !! | ACATTGATTCCAAGGCAGTG+TGG | + | chr1_4:70010716-70010735 | Msa0181780:intron | 45.0% |
| AGGTGGTATGATGTCCTTCT+TGG | + | chr1_4:70010893-70010912 | Msa0181780:intron | 45.0% | |
| CTTGGTTAAGTCCAAGACAG+CGG | + | chr1_4:70010911-70010930 | Msa0181780:CDS | 45.0% | |
| GTTGGGGGTTAAGGTTATGT+TGG | + | chr1_4:70011121-70011140 | Msa0181780:intron | 45.0% | |
| TTCTCCATATCAGGCCAGTT+AGG | - | chr1_4:70011531-70011550 | None:intergenic | 45.0% | |
| ! | ACTGGCCTGATATGGAGAAT+CGG | + | chr1_4:70011532-70011551 | Msa0181780:intron | 45.0% |
| ACTGTAGTAGCAAGGTTGTC+AGG | + | chr1_4:70011570-70011589 | Msa0181780:intron | 45.0% | |
| ATCTTTGTACCGCTCCAACT+CGG | - | chr1_4:70011648-70011667 | None:intergenic | 45.0% | |
| AGTTGGAGCGGTACAAAGAT+CGG | + | chr1_4:70011648-70011667 | Msa0181780:intron | 45.0% | |
| !! | TGCTCGTTTGTTGTTTGCTG+CGG | + | chr1_4:70011796-70011815 | Msa0181780:intron | 45.0% |
| TGAAGGAGAAGACTAGGTCT+AGG | + | chr1_4:70011849-70011868 | Msa0181780:intron | 45.0% | |
| TCTTGCAACCATAGCCTAGA+CGG | - | chr1_4:70012336-70012355 | None:intergenic | 45.0% | |
| ATGGTTGCAAGAGGAGATCT+TGG | + | chr1_4:70012344-70012363 | Msa0181780:CDS | 45.0% | |
| AAAGCGGAACCTCCTCAATA+GGG | - | chr1_4:70012379-70012398 | None:intergenic | 45.0% | |
| AAAAGCGGAACCTCCTCAAT+AGG | - | chr1_4:70012380-70012399 | None:intergenic | 45.0% | |
| TCGATAATGCTTGCCAATGC+AGG | + | chr1_4:70012503-70012522 | Msa0181780:intron | 45.0% | |
| ! | TAACGGCTTTTCCCATGCTA+CGG | - | chr1_4:70012548-70012567 | None:intergenic | 45.0% |
| ATGCAAACATCTCGCTCATG+TGG | - | chr1_4:70013208-70013227 | None:intergenic | 45.0% | |
| CTTCACTAGATCGGGTTTCA+TGG | + | chr1_4:70013274-70013293 | Msa0181780:CDS | 45.0% | |
| AAAGCAAATATGGTGCCTGC+AGG | - | chr1_4:70013323-70013342 | None:intergenic | 45.0% | |
| AAGCAACAAGAGAAAGGGAG+GGG | - | chr1_4:70013365-70013384 | None:intergenic | 45.0% | |
| CCGGAAATGACCTGTATTAC+AGG | - | chr1_4:70013708-70013727 | None:intergenic | 45.0% | |
| ATATTTACAGGGGGGGAAAC+CGG | - | chr1_4:70013727-70013746 | None:intergenic | 45.0% | |
| AAATTTACGGGGGGGAAAAC+CGG | + | chr1_4:70013916-70013935 | Msa0181780:intron | 45.0% | |
| CCTGCATAGCCACCAAAATT+AGG | - | chr1_4:70014013-70014032 | None:intergenic | 45.0% | |
| !! | CCTAATTTTGGTGGCTATGC+AGG | + | chr1_4:70014010-70014029 | Msa0181780:intron | 45.0% |
| ! | TTTGGTGGCTATGCAGGAAA+AGG | + | chr1_4:70014016-70014035 | Msa0181780:intron | 45.0% |
| ! | TTGGTGGCTATGCAGGAAAA+GGG | + | chr1_4:70014017-70014036 | Msa0181780:intron | 45.0% |
| ! | GAAAAGGGTACAACAGAGGT+TGG | + | chr1_4:70014032-70014051 | Msa0181780:CDS | 45.0% |
| !! | CAGAGGTTGGCTTTGTATCA+AGG | + | chr1_4:70014045-70014064 | Msa0181780:CDS | 45.0% |
| GAAGTAGCCCTTGTACAAAG+TGG | + | chr1_4:70014545-70014564 | Msa0181780:CDS | 45.0% | |
| TAGCCCTTGTACAAAGTGGA+AGG | + | chr1_4:70014549-70014568 | Msa0181780:CDS | 45.0% | |
| GTTGCCTTCCACTTTGTACA+AGG | - | chr1_4:70014556-70014575 | None:intergenic | 45.0% | |
| GTGGAATGGAACCTCCATAT+AGG | - | chr1_4:70014578-70014597 | None:intergenic | 45.0% | |
| TCGGACCTGAATATTGTGAG+TGG | - | chr1_4:70014597-70014616 | None:intergenic | 45.0% | |
| AATTTGTGGCGGCTACTGTT+CGG | - | chr1_4:70014616-70014635 | None:intergenic | 45.0% | |
| AGAGTATATGTAGGCCTCAG+AGG | - | chr1_4:70014648-70014667 | None:intergenic | 45.0% | |
| ATCACATTCAGCCATATCCC+GGG | + | chr1_4:70014887-70014906 | Msa0181780:three_prime_UTR | 45.0% | |
| !!! | ATTATGAATTTATTTTTTTA+AGG | + | chr1_4:70012025-70012044 | Msa0181780:intron | 5.0% |
| !!! | TTATGAATTTATTTTTTTAA+GGG | + | chr1_4:70012026-70012045 | Msa0181780:intron | 5.0% |
| !! | AAAAAAAAAAAATATTTACA+GGG | - | chr1_4:70013738-70013757 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAATATTTAC+AGG | - | chr1_4:70013739-70013758 | None:intergenic | 5.0% |
| !! | ATAAAAAAAAAAAAATTTAC+GGG | + | chr1_4:70013904-70013923 | Msa0181780:intron | 5.0% |
| AAATCCCCACTCCTAACCTC+AGG | - | chr1_4:70010200-70010219 | None:intergenic | 50.0% | |
| GGGGACATGCTTCTTGTTGA+CGG | + | chr1_4:70010338-70010357 | Msa0181780:CDS | 50.0% | |
| AAGGGGGTAAGTCTCTGTCT+CGG | + | chr1_4:70010502-70010521 | Msa0181780:intron | 50.0% | |
| TTTCACGGAATCCGCTGTCT+TGG | - | chr1_4:70010925-70010944 | None:intergenic | 50.0% | |
| GCAACACTGCCTTCAATCAC+TGG | + | chr1_4:70011008-70011027 | Msa0181780:CDS | 50.0% | |
| ! | CTTCTCTGTATGTGGGCTGT+TGG | + | chr1_4:70011094-70011113 | Msa0181780:intron | 50.0% |
| ! | CTGTATGTGGGCTGTTGGTT+TGG | + | chr1_4:70011099-70011118 | Msa0181780:intron | 50.0% |
| !! | ATGTGGGCTGTTGGTTTGGT+TGG | + | chr1_4:70011103-70011122 | Msa0181780:intron | 50.0% |
| !! | TGTGGGCTGTTGGTTTGGTT+GGG | + | chr1_4:70011104-70011123 | Msa0181780:intron | 50.0% |
| !! | GTTGGTTTGGTTGGGGGTTA+AGG | + | chr1_4:70011112-70011131 | Msa0181780:intron | 50.0% |
| CACAGCCTGCATTTGATGAG+TGG | - | chr1_4:70011387-70011406 | None:intergenic | 50.0% | |
| CACTCATCAAATGCAGGCTG+TGG | + | chr1_4:70011385-70011404 | Msa0181780:CDS | 50.0% | |
| ! | GTTGCCTAACTGGCCTGATA+TGG | + | chr1_4:70011524-70011543 | Msa0181780:intron | 50.0% |
| CTGGCCTGATATGGAGAATC+GGG | + | chr1_4:70011533-70011552 | Msa0181780:intron | 50.0% | |
| CAGAGAAGAACGGTTTGACC+TGG | + | chr1_4:70011735-70011754 | Msa0181780:intron | 50.0% | |
| !! | TCGTTTGTTGTTTGCTGCGG+CGG | + | chr1_4:70011799-70011818 | Msa0181780:intron | 50.0% |
| AGGCGGCTGTGTTATGATGA+AGG | + | chr1_4:70011832-70011851 | Msa0181780:intron | 50.0% | |
| TTACCATCCCGTCTAGGCTA+TGG | + | chr1_4:70012325-70012344 | Msa0181780:intron | 50.0% | |
| CTTGCAACCATAGCCTAGAC+GGG | - | chr1_4:70012335-70012354 | None:intergenic | 50.0% | |
| GTCTAGGCTATGGTTGCAAG+AGG | + | chr1_4:70012335-70012354 | Msa0181780:intron | 50.0% | |
| TGGTGCAGAACTCCCTATTG+AGG | + | chr1_4:70012364-70012383 | Msa0181780:CDS | 50.0% | |
| TGCAGAACTCCCTATTGAGG+AGG | + | chr1_4:70012367-70012386 | Msa0181780:CDS | 50.0% | |
| TCAGATACCTCTGCTCTGGT+TGG | - | chr1_4:70012615-70012634 | None:intergenic | 50.0% | |
| ! | CTTTCTGGAGAAACCGCACA+TGG | + | chr1_4:70012675-70012694 | Msa0181780:CDS | 50.0% |
| GGCTTCTGTCCGTAATGCTA+CGG | - | chr1_4:70012997-70013016 | None:intergenic | 50.0% | |
| ! | ACAGAAGCCGCTTTACCAAG+TGG | + | chr1_4:70013008-70013027 | Msa0181780:CDS | 50.0% |
| ! | CAGAAGCCGCTTTACCAAGT+GGG | + | chr1_4:70013009-70013028 | Msa0181780:CDS | 50.0% |
| CATCTGCCCACTTGGTAAAG+CGG | - | chr1_4:70013018-70013037 | None:intergenic | 50.0% | |
| GGGCAGATGCCACCTAATAT+TGG | + | chr1_4:70013029-70013048 | Msa0181780:CDS | 50.0% | |
| TTGAGCCATTATCGACCTGC+AGG | + | chr1_4:70013305-70013324 | Msa0181780:CDS | 50.0% | |
| TGGGGTTGGATATCTGTGCT+TGG | + | chr1_4:70013543-70013562 | Msa0181780:intron | 50.0% | |
| ! | GCAGGAAAAGGGTACAACAG+AGG | + | chr1_4:70014028-70014047 | Msa0181780:intron | 50.0% |
| GTGGAAGGCAACCTATATGG+AGG | + | chr1_4:70014564-70014583 | Msa0181780:CDS | 50.0% | |
| TAGGGTCCTGAGGTTAGGAG+TGG | + | chr1_4:70010191-70010210 | Msa0181780:intron | 55.0% | |
| AGGGTCCTGAGGTTAGGAGT+GGG | + | chr1_4:70010192-70010211 | Msa0181780:intron | 55.0% | |
| GAGACAGAGACTTACCCCCT+TGG | - | chr1_4:70010503-70010522 | None:intergenic | 55.0% | |
| TCCAAGGCAGTGTGGCTTAG+TGG | + | chr1_4:70010724-70010743 | Msa0181780:intron | 55.0% | |
| ACCACTAAGCCACACTGCCT+TGG | - | chr1_4:70010728-70010747 | None:intergenic | 55.0% | |
| !! | GTGGGCTGTTGGTTTGGTTG+GGG | + | chr1_4:70011105-70011124 | Msa0181780:intron | 55.0% |
| !! | TGGGCTGTTGGTTTGGTTGG+GGG | + | chr1_4:70011106-70011125 | Msa0181780:intron | 55.0% |
| TCACCTTGTCTCCACCGAGT+TGG | + | chr1_4:70011631-70011650 | Msa0181780:CDS | 55.0% | |
| ! | TTGTCTCCACCGAGTTGGAG+CGG | + | chr1_4:70011636-70011655 | Msa0181780:CDS | 55.0% |
| TTTGTACCGCTCCAACTCGG+TGG | - | chr1_4:70011645-70011664 | None:intergenic | 55.0% | |
| ACTCTTCGCGCGAAACAACC+AGG | - | chr1_4:70011756-70011775 | None:intergenic | 55.0% | |
| ! | GTTGTTTCGCGCGAAGAGTG+AGG | + | chr1_4:70011757-70011776 | Msa0181780:intron | 55.0% |
| TTTCGCGCGAAGAGTGAGGT+CGG | + | chr1_4:70011761-70011780 | Msa0181780:intron | 55.0% | |
| CAACCATAGCCTAGACGGGA+TGG | - | chr1_4:70012331-70012350 | None:intergenic | 55.0% | |
| !! | TGAGGAGGTTCCGCTTTTGC+AGG | + | chr1_4:70012382-70012401 | Msa0181780:CDS | 55.0% |
| GCTGTTCGAGAAGGTTCCGA+TGG | + | chr1_4:70012645-70012664 | Msa0181780:CDS | 55.0% | |
| TTAGGTGGCATCTGCCCACT+TGG | - | chr1_4:70013026-70013045 | None:intergenic | 55.0% | |
| TGGTGCCTGCAGGTCGATAA+TGG | - | chr1_4:70013313-70013332 | None:intergenic | 55.0% | |
| GTGTAAAGGTCGATGGACCG+TGG | - | chr1_4:70014320-70014339 | None:intergenic | 55.0% | |
| GGGTCCTGAGGTTAGGAGTG+GGG | + | chr1_4:70010193-70010212 | Msa0181780:intron | 60.0% | |
| CAGCAGTTCCAACGCCACTC+TGG | - | chr1_4:70010271-70010290 | None:intergenic | 60.0% | |
| ATGGAGGAGAGCTCGCGTCA+CGG | + | chr1_4:70010958-70010977 | Msa0181780:CDS | 60.0% | |
| ! | GCTCCAACTCGGTGGAGACA+AGG | - | chr1_4:70011637-70011656 | None:intergenic | 60.0% |
| GGAAAAGACGACGGAGCGTG+CGG | + | chr1_4:70011669-70011688 | Msa0181780:intron | 60.0% | |
| !! | TTGTTGTTTGCTGCGGCGGC+TGG | + | chr1_4:70011803-70011822 | Msa0181780:intron | 60.0% |
| ACCTCTGCTCTGGTTGGCGT+GGG | - | chr1_4:70012609-70012628 | None:intergenic | 60.0% | |
| TACCTCTGCTCTGGTTGGCG+TGG | - | chr1_4:70012610-70012629 | None:intergenic | 60.0% | |
| CCTCTGCTCTGGTTGGCGTG+GGG | - | chr1_4:70012608-70012627 | None:intergenic | 65.0% | |
| CCCCACGCCAACCAGAGCAG+AGG | + | chr1_4:70012605-70012624 | Msa0181780:CDS | 70.0% | |
| ! | GCTGCGGCGGCTGGTTGCAG+AGG | + | chr1_4:70011812-70011831 | Msa0181780:intron | 75.0% |
| ! | GCGGCGGCTGGTTGCAGAGG+CGG | + | chr1_4:70011815-70011834 | Msa0181780:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 70009638 | 70015030 | 70009638 | ID=Msa0181780;Name=Msa0181780 |
| chr1_4 | mRNA | 70009638 | 70015030 | 70009638 | ID=Msa0181780-mRNA-1;Parent=Msa0181780;Name=Msa0181780-mRNA-1;_AED=0.14;_eAED=0.16;_QI=0|0.66|0.69|0.92|1|1|13|393|547 |
| chr1_4 | exon | 70009638 | 70009694 | 70009638 | ID=Msa0181780-mRNA-1:exon:23366;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70009794 | 70010081 | 70009794 | ID=Msa0181780-mRNA-1:exon:23367;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70010194 | 70010359 | 70010194 | ID=Msa0181780-mRNA-1:exon:23368;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70010895 | 70011029 | 70010895 | ID=Msa0181780-mRNA-1:exon:23369;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70011182 | 70011261 | 70011182 | ID=Msa0181780-mRNA-1:exon:23370;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70011370 | 70011489 | 70011370 | ID=Msa0181780-mRNA-1:exon:23371;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70011580 | 70011657 | 70011580 | ID=Msa0181780-mRNA-1:exon:23372;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70012341 | 70012403 | 70012341 | ID=Msa0181780-mRNA-1:exon:23373;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70012525 | 70012700 | 70012525 | ID=Msa0181780-mRNA-1:exon:23374;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70012962 | 70013064 | 70012962 | ID=Msa0181780-mRNA-1:exon:23375;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70013203 | 70013351 | 70013203 | ID=Msa0181780-mRNA-1:exon:23376;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70014032 | 70014140 | 70014032 | ID=Msa0181780-mRNA-1:exon:23377;Parent=Msa0181780-mRNA-1 |
| chr1_4 | exon | 70014518 | 70015030 | 70014518 | ID=Msa0181780-mRNA-1:exon:23378;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70009638 | 70009694 | 70009638 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70009794 | 70010081 | 70009794 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70010194 | 70010359 | 70010194 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70010895 | 70011029 | 70010895 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70011182 | 70011261 | 70011182 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70011370 | 70011489 | 70011370 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70011580 | 70011657 | 70011580 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70012341 | 70012403 | 70012341 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70012525 | 70012700 | 70012525 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70012962 | 70013064 | 70012962 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70013203 | 70013351 | 70013203 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70014032 | 70014140 | 70014032 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | CDS | 70014518 | 70014637 | 70014518 | ID=Msa0181780-mRNA-1:cds;Parent=Msa0181780-mRNA-1 |
| chr1_4 | three_prime_UTR | 70014638 | 70015030 | 70014638 | ID=Msa0181780-mRNA-1:three_prime_utr;Parent=Msa0181780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
