AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1262900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1262900 MtrunA17_Chr4g0065821 87.243 243 22 2 1 243 1 234 2.82e-152 423
Msa1262900 MtrunA17_Chr4g0065781 61.728 243 88 1 1 243 1 238 2.09e-102 297
Msa1262900 MtrunA17_Chr4g0065791 52.439 246 94 4 1 243 1 226 3.89e-84 250
Msa1262900 MtrunA17_Chr4g0065811 73.333 150 36 1 94 243 1 146 2.33e-71 214
Msa1262900 MtrunA17_Chr2g0287281 45.374 227 119 2 18 243 22 244 5.69e-61 192
Msa1262900 MtrunA17_Chr4g0065801 78.000 50 11 0 1 50 55 104 6.07e-21 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1262900 AT3G23600.1 58.025 243 98 1 1 243 1 239 7.62e-103 298
Msa1262900 AT3G23600.2 57.202 243 97 2 1 243 1 236 2.99e-99 289
Msa1262900 AT3G23570.3 54.733 243 106 1 1 243 1 239 8.80e-95 278
Msa1262900 AT3G23570.1 54.733 243 106 1 1 243 1 239 8.80e-95 278
Msa1262900 AT3G23570.2 54.733 243 106 1 1 243 1 239 8.80e-95 278
Msa1262900 AT1G35420.3 25.238 210 139 5 41 242 74 273 7.22e-18 80.9
Msa1262900 AT1G35420.1 25.238 210 139 5 41 242 110 309 1.04e-17 80.9
Msa1262900 AT1G35420.2 25.238 210 139 5 41 242 115 314 1.17e-17 80.9

Find 155 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTGTCCTTCCACTTTAA+AGG 0.137128 8_2:-65867085 Msa1262900:five_prime_UTR
TCATCATCATACCTTAAAAT+TGG 0.138234 8_2:+65865237 None:intergenic
TCTGAAGCCTTCACAGCTTC+TGG 0.161900 8_2:+65863450 None:intergenic
AAATTAAGTTTCATTCATTT+TGG 0.190013 8_2:-65866689 Msa1262900:intron
ACCTTCTTCTTCGATGATAT+TGG 0.222814 8_2:-65867204 Msa1262900:five_prime_UTR
AAAACAATTTGAACAAGTTT+TGG 0.262734 8_2:-65863921 Msa1262900:CDS
CACGGCAGCTTGAATGAGTT+TGG 0.282183 8_2:+65864485 None:intergenic
TTTGGTCTTTGCTCTCTCTT+TGG 0.286289 8_2:-65866908 Msa1262900:five_prime_UTR
CCTTCTTCTTCGATGATATT+GGG 0.301702 8_2:-65867203 Msa1262900:five_prime_UTR
GCAAAATTATGCATAGTCTT+TGG 0.303125 8_2:-65866797 Msa1262900:five_prime_UTR
AGTAAAGGTATTTCTACTAT+TGG 0.306037 8_2:-65864670 Msa1262900:CDS
CATCATCATACCTTAAAATT+GGG 0.309853 8_2:+65865238 None:intergenic
TAAAATAATGAAATATCTTT+CGG 0.325270 8_2:+65865861 None:intergenic
CCTTTCGACTTGTAGCTTGC+AGG 0.339951 8_2:+65865771 None:intergenic
CTGAAGCCTTCACAGCTTCT+GGG 0.359372 8_2:+65863451 None:intergenic
TTGTTAGAAGCAAATTTCTT+TGG 0.360478 8_2:-65865678 Msa1262900:five_prime_UTR
CTGCATCTAGTTATAGAAAA+CGG 0.380038 8_2:-65866225 Msa1262900:intron
AATATTCCAATTGCTATACT+TGG 0.381640 8_2:-65863980 Msa1262900:CDS
AGGAGGGAAGTGAAGTTAAA+AGG 0.383471 8_2:-65865582 Msa1262900:five_prime_UTR
TCTTTGCTCTCTCTTTGGTT+AGG 0.388826 8_2:-65866903 Msa1262900:five_prime_UTR
GGAAATTACGAAAATGCTAT+TGG 0.396057 8_2:-65867064 Msa1262900:five_prime_UTR
TGTGAGTTGGTCAGAGTAGA+AGG 0.400680 8_2:+65867310 None:intergenic
CGAAAGGCTATAGCAGAGTT+TGG 0.400841 8_2:-65865755 Msa1262900:five_prime_UTR
TTAGGATGTGTCGCGGCTGC+AGG 0.401234 8_2:-65866885 Msa1262900:five_prime_UTR
CACGTCAGATCTTGTTGGAT+TGG 0.404632 8_2:-65863422 Msa1262900:CDS
ATTTCTACTATTGGAGCTGC+TGG 0.404890 8_2:-65864661 Msa1262900:CDS
TTGACAGACCTATAGATGTT+TGG 0.407177 8_2:-65864952 Msa1262900:CDS
CGCTAGGTTTACATGGTTAG+TGG 0.407234 8_2:-65867689 Msa1262900:five_prime_UTR
GCTAAGACTGTGTGTGAACT+TGG 0.413908 8_2:-65864513 Msa1262900:CDS
GCAGACAAGGTTGCAGCAAC+CGG 0.418523 8_2:-65865031 Msa1262900:CDS
ATCTTTCGGAGTGTGTCATA+TGG 0.421011 8_2:+65865875 None:intergenic
GAAGAAGAACAATGAAGTGA+TGG 0.421082 8_2:-65867152 Msa1262900:five_prime_UTR
TAGAAGCAAATTTCTTTGGC+TGG 0.422698 8_2:-65865674 Msa1262900:five_prime_UTR
TGCATCTAGTTATAGAAAAC+GGG 0.437995 8_2:-65866224 Msa1262900:intron
CTGAACTCCTTCAGTGGTGC+TGG 0.438411 8_2:-65865509 Msa1262900:CDS
GGTGTTGATGCTTATCTCAC+TGG 0.438465 8_2:-65865467 Msa1262900:CDS
AGTGCATGGGAGGTTGCGGC+AGG 0.439054 8_2:-65866979 Msa1262900:five_prime_UTR
TAAAAGTACTAACTGGTTGA+TGG 0.439377 8_2:+65864921 None:intergenic
TCTATATTATGTGTGAAGGT+TGG 0.439546 8_2:+65866104 None:intergenic
TTTCGTAATTTCCTTTAAAG+TGG 0.441820 8_2:+65867074 None:intergenic
TCAGCTCCAAGTATAGCAAT+TGG 0.450408 8_2:+65863974 None:intergenic
GTATTATATTTATAGGAGAA+AGG 0.450413 8_2:-65864730 Msa1262900:intron
TCTTTCACCCAAACATCTAT+AGG 0.455726 8_2:+65864944 None:intergenic
TGACAGACCTATAGATGTTT+GGG 0.465529 8_2:-65864951 Msa1262900:CDS
GAAAATTTCTCAAGTTCGCT+AGG 0.466178 8_2:-65867705 Msa1262900:five_prime_UTR
AAATGCTGCTCTATAGATCA+AGG 0.469222 8_2:-65866129 Msa1262900:five_prime_UTR
ATTGGTGTCATATTTGTGGC+AGG 0.471982 8_2:-65867046 Msa1262900:five_prime_UTR
GGGAGGTTGCGGCAGGGACG+AGG 0.477642 8_2:-65866972 Msa1262900:five_prime_UTR
ATGTGAGTGTTGAGTATTGA+AGG 0.479110 8_2:-65865602 Msa1262900:five_prime_UTR
TCAAGTTCGCTAGGTTTACA+TGG 0.479308 8_2:-65867696 Msa1262900:five_prime_UTR
TGAAGTGATGGGAGAGAAAA+GGG 0.481797 8_2:-65867140 Msa1262900:five_prime_UTR
ATGAAGTGATGGGAGAGAAA+AGG 0.489856 8_2:-65867141 Msa1262900:five_prime_UTR
GTAATTTCCTTTAAAGTGGA+AGG 0.490556 8_2:+65867078 None:intergenic
AAGAAGTGCATGGGAGGTTG+CGG 0.492931 8_2:-65866983 Msa1262900:five_prime_UTR
CTTTCGACTTGTAGCTTGCA+GGG 0.493445 8_2:+65865772 None:intergenic
GAAAACGGGAGTGTTGGACT+TGG 0.493979 8_2:-65866210 Msa1262900:five_prime_UTR
ATGGTTGAGGGCGACGGGAC+CGG 0.498301 8_2:+65867356 None:intergenic
TGACCTCTGGAGGAGTAACT+TGG 0.499609 8_2:+65863945 None:intergenic
CCACTGAAGGAGTTCAGAAC+TGG 0.500926 8_2:+65865515 None:intergenic
GCTGGCCATGTTGCTAAACT+TGG 0.501919 8_2:-65865491 Msa1262900:CDS
GTCTTTGGCTTAGTTGTGTG+TGG 0.502258 8_2:-65866782 Msa1262900:five_prime_UTR
TATTGATGGTTGAGGGCGAC+GGG 0.507244 8_2:+65867351 None:intergenic
TAAATAACAACAAAATAGAA+TGG 0.509270 8_2:+65863871 None:intergenic
GGAGGCACGTCAGATCTTGT+TGG 0.510275 8_2:-65863427 Msa1262900:CDS
GGATCGCCGTTGAAGAAGTC+GGG 0.513477 8_2:+65864992 None:intergenic
GTTATAGAAAACGGGAGTGT+TGG 0.515353 8_2:-65866216 Msa1262900:five_prime_UTR
AATGTCGGAGACGAGGAGAA+TGG 0.515388 8_2:+65865424 None:intergenic
TGCTATTGGTGTCATATTTG+TGG 0.515588 8_2:-65867050 Msa1262900:five_prime_UTR
AGAAGCTGTGAAGGCTTCAG+AGG 0.515748 8_2:-65863448 Msa1262900:CDS
GGCCATGTTGCTAAACTTGG+TGG 0.517313 8_2:-65865488 Msa1262900:CDS
CCCAATATCATCGAAGAAGA+AGG 0.521685 8_2:+65867203 None:intergenic
GTGAAGGATGTTTGCAGACA+AGG 0.524084 8_2:-65865044 Msa1262900:intron
GGTGAGGATATTGATGGTTG+AGG 0.532723 8_2:+65867343 None:intergenic
GATCTGAGAAGGAGGAGTTA+TGG 0.533763 8_2:+65867249 None:intergenic
AAGAAGAACAATGAAGTGAT+GGG 0.536783 8_2:-65867151 Msa1262900:five_prime_UTR
GTGGTTCCCGACTTCTTCAA+CGG 0.543789 8_2:-65864998 Msa1262900:CDS
GGAGATGAGAGAGGAACGAG+TGG 0.547146 8_2:+65867511 None:intergenic
ACCACCATGCTTCTTCCACT+CGG 0.547894 8_2:-65867282 Msa1262900:five_prime_UTR
GATGAGAGAGGAACGAGTGG+AGG 0.548710 8_2:+65867514 None:intergenic
ATCATCATACCTTAAAATTG+GGG 0.549803 8_2:+65865239 None:intergenic
GGTCGTGGTGAGGATATTGA+TGG 0.554223 8_2:+65867337 None:intergenic
GGACCGGTGAGGCATGGTAG+TGG 0.556881 8_2:+65867372 None:intergenic
ATGGTGGTGGTTGTGTGAGT+TGG 0.557374 8_2:+65867297 None:intergenic
TAGTGAGTTGGAGATGAGAG+AGG 0.558501 8_2:+65867502 None:intergenic
GGCGGGTTTGAGCAGCATGC+CGG 0.559592 8_2:+65865536 None:intergenic
AGAAGAAGGTGGAGACATGA+TGG 0.559955 8_2:+65867217 None:intergenic
AAACAACGGTGGTAGTGAGT+TGG 0.562750 8_2:+65867490 None:intergenic
GGACACAAGCATAAGAGAGA+TGG 0.563956 8_2:-65867119 Msa1262900:five_prime_UTR
GGGAACCACCACATAATATC+CGG 0.564070 8_2:+65865012 None:intergenic
AATAATGAAAAGAAGTGCAT+GGG 0.565812 8_2:-65866992 Msa1262900:five_prime_UTR
AAATAATGAAAAGAAGTGCA+TGG 0.567416 8_2:-65866993 Msa1262900:five_prime_UTR
TTGGTGTCATATTTGTGGCA+GGG 0.569338 8_2:-65867045 Msa1262900:five_prime_UTR
TCGTCCACTGTGATATATGA+TGG 0.569466 8_2:+65864453 None:intergenic
TACCGAAAATGTCGGAGACG+AGG 0.570501 8_2:+65865417 None:intergenic
AGAGTAGAAGGATGAGGTCG+TGG 0.571991 8_2:+65867322 None:intergenic
GTCAACATTCTGAGGATCGT+AGG 0.572570 8_2:+65864970 None:intergenic
CAATATTGTGTGTGGAAGAG+AGG 0.572728 8_2:+65865813 None:intergenic
TAAAGACCCAGAAGCTGTGA+AGG 0.579286 8_2:-65863457 Msa1262900:CDS
GTGAGGATATTGATGGTTGA+GGG 0.579304 8_2:+65867344 None:intergenic
TTGGTCAGAGTAGAAGGATG+AGG 0.580101 8_2:+65867316 None:intergenic
AGAAGGATGAGGTCGTGGTG+AGG 0.580555 8_2:+65867327 None:intergenic
ATATTGATGGTTGAGGGCGA+CGG 0.580671 8_2:+65867350 None:intergenic
ATTTATAACTAGATATGTGT+AGG 0.583094 8_2:+65865629 None:intergenic
ACGGGAGTGTTGGACTTGGA+AGG 0.583486 8_2:-65866206 Msa1262900:five_prime_UTR
GGGATCGCCGTTGAAGAAGT+CGG 0.584664 8_2:+65864991 None:intergenic
TCAACATTCTGAGGATCGTA+GGG 0.585841 8_2:+65864971 None:intergenic
CTGAGAAGGAGGAGTTATGG+TGG 0.587851 8_2:+65867252 None:intergenic
TCACCACTACCATGCCTCAC+CGG 0.589431 8_2:-65867375 Msa1262900:five_prime_UTR
GAGAGATCATGATGGAGAGA+TGG 0.590784 8_2:+65867444 None:intergenic
CTGAAGGAGTTCAGAACTGG+CGG 0.590785 8_2:+65865518 None:intergenic
ATAGGTCTGTCAACATTCTG+AGG 0.591096 8_2:+65864962 None:intergenic
TGCAGCAACCGGATATTATG+TGG 0.592827 8_2:-65865020 Msa1262900:CDS
CCAGTTCTGAACTCCTTCAG+TGG 0.601307 8_2:-65865515 Msa1262900:CDS
AACATTGAGAGAGATCATGA+TGG 0.602253 8_2:+65867436 None:intergenic
CTAAGACTGTGTGTGAACTT+GGG 0.604992 8_2:-65864512 Msa1262900:CDS
AACATGGCCAGCACCACTGA+AGG 0.605814 8_2:+65865502 None:intergenic
AATGAAAAGAAGTGCATGGG+AGG 0.606054 8_2:-65866989 Msa1262900:five_prime_UTR
GAGTGTTGAGTATTGAAGGA+GGG 0.606176 8_2:-65865598 Msa1262900:five_prime_UTR
CACCACCAAGTTTAGCAACA+TGG 0.606489 8_2:+65865486 None:intergenic
AGCTGTGAAGGCTTCAGAGG+AGG 0.607631 8_2:-65863445 Msa1262900:CDS
TGAAGGAGTTCAGAACTGGC+GGG 0.608726 8_2:+65865519 None:intergenic
AAACAACTATATGCTTGCAA+AGG 0.609308 8_2:-65867582 Msa1262900:five_prime_UTR
TGAGGGCGACGGGACCGGTG+AGG 0.613677 8_2:+65867361 None:intergenic
AGAATATTCAATATTGTGTG+TGG 0.614760 8_2:+65865805 None:intergenic
GGAGACGAGGAGAATGGCGA+AGG 0.615322 8_2:+65865430 None:intergenic
TGAATCTTACAGCGCAGCGG+TGG 0.620912 8_2:-65865986 Msa1262900:five_prime_UTR
TGTGTAGGACCCACTACATG+TGG 0.623768 8_2:+65865644 None:intergenic
CCTGCAAGCTACAAGTCGAA+AGG 0.626675 8_2:-65865771 Msa1262900:five_prime_UTR
GAGTGGAAGAAGCATGGTGG+TGG 0.634535 8_2:+65867284 None:intergenic
GGTTGTCGTGGGATCTGAGA+AGG 0.636230 8_2:+65867238 None:intergenic
AATGCTGCTCTATAGATCAA+GGG 0.636278 8_2:-65866128 Msa1262900:five_prime_UTR
TGGAGACATGATGGTTGTCG+TGG 0.640355 8_2:+65867226 None:intergenic
AATATCATCGAAGAAGAAGG+TGG 0.640472 8_2:+65867206 None:intergenic
GTGCATGGGAGGTTGCGGCA+GGG 0.642832 8_2:-65866978 Msa1262900:five_prime_UTR
ATCACAGTGGACGACATCAA+AGG 0.644789 8_2:-65864444 Msa1262900:intron
TAGAACAGTACCGAAAATGT+CGG 0.648160 8_2:+65865409 None:intergenic
TGAGTGTTGAGTATTGAAGG+AGG 0.652086 8_2:-65865599 Msa1262900:five_prime_UTR
TGTCGTGGGATCTGAGAAGG+AGG 0.653819 8_2:+65867241 None:intergenic
AGAATGGCGAAGGTGCAAAG+AGG 0.653955 8_2:+65865440 None:intergenic
ATGTATATATGTATGTGTGA+TGG 0.657599 8_2:+65863848 None:intergenic
GTTGGACTTGGAAGGAAGTG+CGG 0.664102 8_2:-65866198 Msa1262900:five_prime_UTR
AGATCCGAGTGGAAGAAGCA+TGG 0.665286 8_2:+65867278 None:intergenic
GGAGACATGATGGTTGTCGT+GGG 0.667774 8_2:+65867227 None:intergenic
ATATGATGGATGTGCTAACA+CGG 0.668508 8_2:+65864467 None:intergenic
AGCAACCGGATATTATGTGG+TGG 0.672628 8_2:-65865017 Msa1262900:CDS
CTCGCATTAAACTCATCGAG+AGG 0.685335 8_2:+65866041 None:intergenic
GTCGTCAGAGAGAGAAACAA+CGG 0.685456 8_2:+65867476 None:intergenic
CGACCAAGTTACTCCTCCAG+AGG 0.688981 8_2:-65863948 Msa1262900:CDS
TCTTTGGTTAGGATGTGTCG+CGG 0.693435 8_2:-65866892 Msa1262900:five_prime_UTR
GTGTAGGACCCACTACATGT+GGG 0.708991 8_2:+65865645 None:intergenic
TCCGAGTGGAAGAAGCATGG+TGG 0.715200 8_2:+65867281 None:intergenic
AATTGAATCTTACAGCGCAG+CGG 0.720778 8_2:-65865989 Msa1262900:five_prime_UTR
GTCAGAGAGAGAAACAACGG+TGG 0.746065 8_2:+65867479 None:intergenic
TATGGTGGTTGAGATCCGAG+TGG 0.761845 8_2:+65867267 None:intergenic
ACATCCATCATATATCACAG+TGG 0.821753 8_2:-65864457 Msa1262900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATATACATTTCATTT+TGG - chr8_2:65864678-65864697 Msa1262900:CDS 10.0%
!!! AAATTTTTCATGTTAAATAT+TGG + chr8_2:65865186-65865205 None:intergenic 10.0%
!!! CATGTTAAATATTTTTTTTT+AGG + chr8_2:65865210-65865229 None:intergenic 10.0%
!! TAAAATAATGAAATATCTTT+CGG + chr8_2:65865273-65865292 None:intergenic 10.0%
!!! CATTCAAATATATTTAAAAT+TGG + chr8_2:65866818-65866837 None:intergenic 10.0%
!! AAAAAAATTATTCTAATAAG+CGG + chr8_2:65866922-65866941 None:intergenic 10.0%
!!! ATAATTTTTTTTTTTGAAGA+AGG - chr8_2:65866931-65866950 Msa1262900:five_prime_UTR 10.0%
!!! TAATTTTTTTTTTTGAAGAA+GGG - chr8_2:65866932-65866951 Msa1262900:five_prime_UTR 10.0%
!!! TTTTAAAACATATTATTTGT+CGG - chr8_2:65866978-65866997 Msa1262900:five_prime_UTR 10.0%
!! GAAAATTTATCATAATATTT+GGG + chr8_2:65867071-65867090 None:intergenic 10.0%
!!! AAATTAAGTTTCATTCATTT+TGG - chr8_2:65864442-65864461 Msa1262900:intron 15.0%
!! TAACAAAACAAAAATCTTTA+AGG - chr8_2:65864957-65864976 Msa1262900:CDS 15.0%
!!! ATTCAATTTCTTTTAGATTT+TGG + chr8_2:65865130-65865149 None:intergenic 15.0%
!!! AAATATAGATTTTGACTTTT+TGG - chr8_2:65865981-65866000 Msa1262900:five_prime_UTR 15.0%
!! TAAATATATTTGAATGTAAG+AGG - chr8_2:65866822-65866841 Msa1262900:five_prime_UTR 15.0%
!! GGAAAATTTATCATAATATT+TGG + chr8_2:65867072-65867091 None:intergenic 15.0%
!! TAAATAACAACAAAATAGAA+TGG + chr8_2:65867263-65867282 None:intergenic 15.0%
!! TAGTATATTGGAATTTAATT+TGG + chr8_2:65867377-65867396 None:intergenic 15.0%
!! TTATCTAAAAAGAAAGTAAC+AGG - chr8_2:65864373-65864392 Msa1262900:intron 20.0%
!! ATAATCTAAATCAAACTGAT+GGG + chr8_2:65864485-65864504 None:intergenic 20.0%
!!! TTTTAGTTTGTGTTTTGTTT+TGG - chr8_2:65864560-65864579 Msa1262900:intron 20.0%
!! TTAAGTGACAAATTATGAAA+TGG + chr8_2:65864607-65864626 None:intergenic 20.0%
!!! ATAGTTATATGTGTGAATTT+TGG - chr8_2:65864770-65864789 Msa1262900:intron 20.0%
!!! TTTTTCTATATTATGTGTGA+AGG + chr8_2:65865034-65865053 None:intergenic 20.0%
!! ATTTATAACTAGATATGTGT+AGG + chr8_2:65865505-65865524 None:intergenic 20.0%
!!! TTTTTCACTTACAAAAGAAT+TGG - chr8_2:65866021-65866040 Msa1262900:five_prime_UTR 20.0%
!!! ATCATTATAAAAGTACTAAC+TGG + chr8_2:65866220-65866239 None:intergenic 20.0%
!! CTTGCATGTATTATATTTAT+AGG - chr8_2:65866394-65866413 Msa1262900:intron 20.0%
!! GTATTATATTTATAGGAGAA+AGG - chr8_2:65866401-65866420 Msa1262900:intron 20.0%
!!! AGAAATACCTTTACTTTTTA+AGG + chr8_2:65866456-65866475 None:intergenic 20.0%
!! ATGAACATTGTAAGAATATA+TGG + chr8_2:65867093-65867112 None:intergenic 20.0%
!!! TAATTATTAGTCTTTCTTTC+AGG - chr8_2:65867124-65867143 Msa1262900:five_prime_UTR 20.0%
!!! AAAACAATTTGAACAAGTTT+TGG - chr8_2:65867210-65867229 Msa1262900:five_prime_UTR 20.0%
!!! TAGTTGATAATTATGTTGAT+TGG - chr8_2:65867408-65867427 Msa1262900:intron 20.0%
!!! AGTTGATAATTATGTTGATT+GGG - chr8_2:65867409-65867428 Msa1262900:intron 20.0%
!! TTTCGTAATTTCCTTTAAAG+TGG + chr8_2:65864060-65864079 None:intergenic 25.0%
!! AAATAATGAAAAGAAGTGCA+TGG - chr8_2:65864138-65864157 Msa1262900:intron 25.0%
!! AATAATGAAAAGAAGTGCAT+GGG - chr8_2:65864139-65864158 Msa1262900:intron 25.0%
!! TTAAGTTTCATTCATTTTGG+TGG - chr8_2:65864445-65864464 Msa1262900:CDS 25.0%
! GATAATCTAAATCAAACTGA+TGG + chr8_2:65864486-65864505 None:intergenic 25.0%
! AGAATATTCAATATTGTGTG+TGG + chr8_2:65865329-65865348 None:intergenic 25.0%
! TTGTTAGAAGCAAATTTCTT+TGG - chr8_2:65865453-65865472 Msa1262900:CDS 25.0%
! GTCAAACAAACAAAAATGTT+AGG - chr8_2:65865571-65865590 Msa1262900:five_prime_UTR 25.0%
!!! ACATGCTTAATTTGTTTTGT+AGG - chr8_2:65865861-65865880 Msa1262900:five_prime_UTR 25.0%
! ATCATCATACCTTAAAATTG+GGG + chr8_2:65865895-65865914 None:intergenic 25.0%
! CATCATCATACCTTAAAATT+GGG + chr8_2:65865896-65865915 None:intergenic 25.0%
! TCATCATCATACCTTAAAAT+TGG + chr8_2:65865897-65865916 None:intergenic 25.0%
!! AATCTATATTTAAGACCAGA+GGG + chr8_2:65865972-65865991 None:intergenic 25.0%
!! AAATCTATATTTAAGACCAG+AGG + chr8_2:65865973-65865992 None:intergenic 25.0%
! TCAACAAAATGTAAACCATA+AGG + chr8_2:65866060-65866079 None:intergenic 25.0%
!!! CTTTTTAAGGCTTCAATTAT+TGG + chr8_2:65866443-65866462 None:intergenic 25.0%
! ATTGAAGCCTTAAAAAGTAA+AGG - chr8_2:65866446-65866465 Msa1262900:intron 25.0%
!!! AGTAAAGGTATTTCTACTAT+TGG - chr8_2:65866461-65866480 Msa1262900:intron 25.0%
! AATATTCCAATTGCTATACT+TGG - chr8_2:65867151-65867170 Msa1262900:five_prime_UTR 25.0%
! ATGTATATATGTATGTGTGA+TGG + chr8_2:65867286-65867305 None:intergenic 25.0%
! TACTCAGAATTTCTTGTATA+AGG + chr8_2:65867337-65867356 None:intergenic 25.0%
! ATAATTATCAACTAACGCTA+TGG + chr8_2:65867402-65867421 None:intergenic 25.0%
!!! TTAGTTTTTCTACTTTGTCT+GGG + chr8_2:65867498-65867517 None:intergenic 25.0%
!!! ATTAGTTTTTCTACTTTGTC+TGG + chr8_2:65867499-65867518 None:intergenic 25.0%
AAACAACTATATGCTTGCAA+AGG - chr8_2:65863549-65863568 Msa1262900:intron 30.0%
AAGAAGAACAATGAAGTGAT+GGG - chr8_2:65863980-65863999 Msa1262900:CDS 30.0%
AAATTGTCCTTCCACTTTAA+AGG - chr8_2:65864046-65864065 Msa1262900:intron 30.0%
!! GTAATTTCCTTTAAAGTGGA+AGG + chr8_2:65864056-65864075 None:intergenic 30.0%
GGAAATTACGAAAATGCTAT+TGG - chr8_2:65864067-65864086 Msa1262900:intron 30.0%
! GTTCATTTTACTTCTCTCAT+AGG - chr8_2:65864294-65864313 Msa1262900:intron 30.0%
GCAAAATTATGCATAGTCTT+TGG - chr8_2:65864334-65864353 Msa1262900:intron 30.0%
!! TTCATTTTGGTGGTTAAAAG+AGG - chr8_2:65864455-65864474 Msa1262900:CDS 30.0%
!!! ATCAAATTTTTTTGGGTCGA+TGG + chr8_2:65864813-65864832 None:intergenic 30.0%
AAATATCACGAAACACGTTA+CGG + chr8_2:65864845-65864864 None:intergenic 30.0%
CTGCATCTAGTTATAGAAAA+CGG - chr8_2:65864906-65864925 Msa1262900:intron 30.0%
TGCATCTAGTTATAGAAAAC+GGG - chr8_2:65864907-65864926 Msa1262900:intron 30.0%
TCTATATTATGTGTGAAGGT+TGG + chr8_2:65865030-65865049 None:intergenic 30.0%
!!! TGTGTCATATGGTTTTTTCT+TGG + chr8_2:65865248-65865267 None:intergenic 30.0%
ACAAACAAAAATGTTAGGTC+CGG - chr8_2:65865576-65865595 Msa1262900:five_prime_UTR 30.0%
! TTTCCTTCTCATGTATTTTG+CGG - chr8_2:65865750-65865769 Msa1262900:five_prime_UTR 30.0%
! GATATAAAGCCCCAATTTTA+AGG - chr8_2:65865883-65865902 Msa1262900:five_prime_UTR 30.0%
CATATTGAAAACGTGAGAAT+TGG + chr8_2:65865925-65865944 None:intergenic 30.0%
! GGTTGTTTCAATATTCCTTA+TGG - chr8_2:65866042-65866061 Msa1262900:five_prime_UTR 30.0%
! TTTTGTTGATCTGTTTGTGA+AGG - chr8_2:65866071-65866090 Msa1262900:five_prime_UTR 30.0%
!! TAAAAGTACTAACTGGTTGA+TGG + chr8_2:65866213-65866232 None:intergenic 30.0%
AGGCACAATAACAATAAACA+AGG + chr8_2:65866355-65866374 None:intergenic 30.0%
ATCAAGGAATATGCAAATTG+AGG + chr8_2:65866739-65866758 None:intergenic 30.0%
TTTGCATATTCCTTGATTAG+AGG - chr8_2:65866742-65866761 Msa1262900:five_prime_UTR 30.0%
!! TCAAATTGTTTTATGACCTC+TGG + chr8_2:65867202-65867221 None:intergenic 30.0%
GAAAATTTCTCAAGTTCGCT+AGG - chr8_2:65863426-65863445 Msa1262900:CDS 35.0%
AACATTGAGAGAGATCATGA+TGG + chr8_2:65863698-65863717 None:intergenic 35.0%
AATATCATCGAAGAAGAAGG+TGG + chr8_2:65863928-65863947 None:intergenic 35.0%
ACCTTCTTCTTCGATGATAT+TGG - chr8_2:65863927-65863946 Msa1262900:CDS 35.0%
CCTTCTTCTTCGATGATATT+GGG - chr8_2:65863928-65863947 Msa1262900:CDS 35.0%
GAAGAAGAACAATGAAGTGA+TGG - chr8_2:65863979-65863998 Msa1262900:CDS 35.0%
!! TGCTATTGGTGTCATATTTG+TGG - chr8_2:65864081-65864100 Msa1262900:intron 35.0%
! GACTATGCATAATTTTGCGA+AGG + chr8_2:65864332-65864351 None:intergenic 35.0%
ACAGAAACAAGACACTTAAG+AGG + chr8_2:65864526-65864545 None:intergenic 35.0%
!! GTGTCTTGTTTCTGTTTCTT+AGG - chr8_2:65864531-65864550 Msa1262900:intron 35.0%
CTATAACTAGATGCAGGAAA+AGG + chr8_2:65864902-65864921 None:intergenic 35.0%
! CGTTTTCTATAACTAGATGC+AGG + chr8_2:65864908-65864927 None:intergenic 35.0%
AAATGCTGCTCTATAGATCA+AGG - chr8_2:65865002-65865021 Msa1262900:CDS 35.0%
AATGCTGCTCTATAGATCAA+GGG - chr8_2:65865003-65865022 Msa1262900:CDS 35.0%
! ATGCTGCATTTTTCTTACAG+TGG + chr8_2:65865402-65865421 None:intergenic 35.0%
TAGAAGCAAATTTCTTTGGC+TGG - chr8_2:65865457-65865476 Msa1262900:CDS 35.0%
!! ATGTGAGTGTTGAGTATTGA+AGG - chr8_2:65865529-65865548 Msa1262900:CDS 35.0%
! TAGAACAGTACCGAAAATGT+CGG + chr8_2:65865725-65865744 None:intergenic 35.0%
GCAAAATACATGAGAAGGAA+AGG + chr8_2:65865751-65865770 None:intergenic 35.0%
TTGACAGACCTATAGATGTT+TGG - chr8_2:65866179-65866198 Msa1262900:five_prime_UTR 35.0%
TGACAGACCTATAGATGTTT+GGG - chr8_2:65866180-65866199 Msa1262900:five_prime_UTR 35.0%
TCTTTCACCCAAACATCTAT+AGG + chr8_2:65866190-65866209 None:intergenic 35.0%
!! ATATGATGGATGTGCTAACA+CGG + chr8_2:65866667-65866686 None:intergenic 35.0%
ACATCCATCATATATCACAG+TGG - chr8_2:65866674-65866693 Msa1262900:intron 35.0%
!! AATTGTTTTATGACCTCTGG+AGG + chr8_2:65867199-65867218 None:intergenic 35.0%
!! AACGCTATGGACTAGTATAT+TGG + chr8_2:65867389-65867408 None:intergenic 35.0%
! ATTATGTTGATTGGGTAGTG+AGG - chr8_2:65867417-65867436 Msa1262900:intron 35.0%
TAAGTTCTTGAGTTCAAACC+CGG - chr8_2:65867472-65867491 Msa1262900:five_prime_UTR 35.0%
!!! ATGTATCGTTTTGTTTGTGC+AGG - chr8_2:65867590-65867609 Msa1262900:five_prime_UTR 35.0%
ATATTTCCTAATGTCTCGCA+TGG - chr8_2:65867630-65867649 Msa1262900:five_prime_UTR 35.0%
TCAAGTTCGCTAGGTTTACA+TGG - chr8_2:65863435-65863454 Msa1262900:CDS 40.0%
! GTGAGGATATTGATGGTTGA+GGG + chr8_2:65863790-65863809 None:intergenic 40.0%
CCCAATATCATCGAAGAAGA+AGG + chr8_2:65863931-65863950 None:intergenic 40.0%
! ATGAAGTGATGGGAGAGAAA+AGG - chr8_2:65863990-65864009 Msa1262900:intron 40.0%
! TGAAGTGATGGGAGAGAAAA+GGG - chr8_2:65863991-65864010 Msa1262900:intron 40.0%
!! ATTGGTGTCATATTTGTGGC+AGG - chr8_2:65864085-65864104 Msa1262900:intron 40.0%
!! TTGGTGTCATATTTGTGGCA+GGG - chr8_2:65864086-65864105 Msa1262900:intron 40.0%
! AATGAAAAGAAGTGCATGGG+AGG - chr8_2:65864142-65864161 Msa1262900:intron 40.0%
! GTTCGTTCGTTGCGATTTTT+CGG - chr8_2:65864195-65864214 Msa1262900:intron 40.0%
! TTCGTTCGTTGCGATTTTTC+GGG - chr8_2:65864196-65864215 Msa1262900:intron 40.0%
!!! TGCGATTTTTCGGGAAGATT+TGG - chr8_2:65864205-65864224 Msa1262900:intron 40.0%
! TTTGGTCTTTGCTCTCTCTT+TGG - chr8_2:65864223-65864242 Msa1262900:intron 40.0%
TCTTTGCTCTCTCTTTGGTT+AGG - chr8_2:65864228-65864247 Msa1262900:intron 40.0%
!! GCGAATTTTTCAGCACAAAG+AGG - chr8_2:65864395-65864414 Msa1262900:intron 40.0%
GATTCTAGTACATCATGTGC+TGG - chr8_2:65864633-65864652 Msa1262900:intron 40.0%
TAGTACATCATGTGCTGGAA+GGG - chr8_2:65864638-65864657 Msa1262900:intron 40.0%
! GTTATAGAAAACGGGAGTGT+TGG - chr8_2:65864915-65864934 Msa1262900:intron 40.0%
AATTGAATCTTACAGCGCAG+CGG - chr8_2:65865142-65865161 Msa1262900:intron 40.0%
ATCTTTCGGAGTGTGTCATA+TGG + chr8_2:65865259-65865278 None:intergenic 40.0%
CAATATTGTGTGTGGAAGAG+AGG + chr8_2:65865321-65865340 None:intergenic 40.0%
! TGGATTTTACCCACATGTAG+TGG - chr8_2:65865477-65865496 Msa1262900:CDS 40.0%
! GGATTTTACCCACATGTAGT+GGG - chr8_2:65865478-65865497 Msa1262900:CDS 40.0%
!! TGAGTGTTGAGTATTGAAGG+AGG - chr8_2:65865532-65865551 Msa1262900:CDS 40.0%
!! GAGTGTTGAGTATTGAAGGA+GGG - chr8_2:65865533-65865552 Msa1262900:CDS 40.0%
AGGAGGGAAGTGAAGTTAAA+AGG - chr8_2:65865549-65865568 Msa1262900:exon 40.0%
! TCAACATTCTGAGGATCGTA+GGG + chr8_2:65866163-65866182 None:intergenic 40.0%
ATAGGTCTGTCAACATTCTG+AGG + chr8_2:65866172-65866191 None:intergenic 40.0%
! GTGCCTTCCACATAATTTTC+TGG - chr8_2:65866369-65866388 Msa1262900:intron 40.0%
GTGCCAGAAAATTATGTGGA+AGG + chr8_2:65866375-65866394 None:intergenic 40.0%
GCAAGTGCCAGAAAATTATG+TGG + chr8_2:65866379-65866398 None:intergenic 40.0%
ATTTCTACTATTGGAGCTGC+TGG - chr8_2:65866470-65866489 Msa1262900:intron 40.0%
GTGAGTGTCTTTCACTTGTT+TGG - chr8_2:65866507-65866526 Msa1262900:intron 40.0%
CTAAGACTGTGTGTGAACTT+GGG - chr8_2:65866619-65866638 Msa1262900:intron 40.0%
TCGTCCACTGTGATATATGA+TGG + chr8_2:65866681-65866700 None:intergenic 40.0%
ATTCCTTGATTAGAGGACTC+AGG - chr8_2:65866749-65866768 Msa1262900:five_prime_UTR 40.0%
TTTCCTGAGTCCTCTAATCA+AGG + chr8_2:65866755-65866774 None:intergenic 40.0%
TCAGCTCCAAGTATAGCAAT+TGG + chr8_2:65867160-65867179 None:intergenic 40.0%
! TTTTTCTACTTTGTCTGGGC+CGG + chr8_2:65867494-65867513 None:intergenic 40.0%
CGCTAGGTTTACATGGTTAG+TGG - chr8_2:65863442-65863461 Msa1262900:CDS 45.0%
! TAGTGAGTTGGAGATGAGAG+AGG + chr8_2:65863632-65863651 None:intergenic 45.0%
! AAACAACGGTGGTAGTGAGT+TGG + chr8_2:65863644-65863663 None:intergenic 45.0%
GTCGTCAGAGAGAGAAACAA+CGG + chr8_2:65863658-65863677 None:intergenic 45.0%
! GAGAGATCATGATGGAGAGA+TGG + chr8_2:65863690-65863709 None:intergenic 45.0%
! ATATTGATGGTTGAGGGCGA+CGG + chr8_2:65863784-65863803 None:intergenic 45.0%
! GGTGAGGATATTGATGGTTG+AGG + chr8_2:65863791-65863810 None:intergenic 45.0%
TTGGTCAGAGTAGAAGGATG+AGG + chr8_2:65863818-65863837 None:intergenic 45.0%
!! TGTGAGTTGGTCAGAGTAGA+AGG + chr8_2:65863824-65863843 None:intergenic 45.0%
GATCTGAGAAGGAGGAGTTA+TGG + chr8_2:65863885-65863904 None:intergenic 45.0%
AGAAGAAGGTGGAGACATGA+TGG + chr8_2:65863917-65863936 None:intergenic 45.0%
GGACACAAGCATAAGAGAGA+TGG - chr8_2:65864012-65864031 Msa1262900:intron 45.0%
TCTTTGGTTAGGATGTGTCG+CGG - chr8_2:65864239-65864258 Msa1262900:intron 45.0%
! GTCTTTGGCTTAGTTGTGTG+TGG - chr8_2:65864349-65864368 Msa1262900:intron 45.0%
CTAGTACATCATGTGCTGGA+AGG - chr8_2:65864637-65864656 Msa1262900:intron 45.0%
!!! TTTTTGGGTCGATGGACAAG+AGG + chr8_2:65864805-65864824 None:intergenic 45.0%
CTCGCATTAAACTCATCGAG+AGG + chr8_2:65865093-65865112 None:intergenic 45.0%
! CTTTCGACTTGTAGCTTGCA+GGG + chr8_2:65865362-65865381 None:intergenic 45.0%
CGAAAGGCTATAGCAGAGTT+TGG - chr8_2:65865376-65865395 Msa1262900:intron 45.0%
CACCACCAAGTTTAGCAACA+TGG + chr8_2:65865648-65865667 None:intergenic 45.0%
!! GGTGTTGATGCTTATCTCAC+TGG - chr8_2:65865664-65865683 Msa1262900:five_prime_UTR 45.0%
CCTCCGCAAAATACATGAGA+AGG + chr8_2:65865756-65865775 None:intergenic 45.0%
! CCTTCTCATGTATTTTGCGG+AGG - chr8_2:65865753-65865772 Msa1262900:five_prime_UTR 45.0%
! CATGTATTTTGCGGAGGTCA+TGG - chr8_2:65865759-65865778 Msa1262900:five_prime_UTR 45.0%
TTGATACTAAACGCTCCCTC+TGG - chr8_2:65865954-65865973 Msa1262900:five_prime_UTR 45.0%
GTGAAGGATGTTTGCAGACA+AGG - chr8_2:65866087-65866106 Msa1262900:five_prime_UTR 45.0%
TGCAGCAACCGGATATTATG+TGG - chr8_2:65866111-65866130 Msa1262900:five_prime_UTR 45.0%
AGCAACCGGATATTATGTGG+TGG - chr8_2:65866114-65866133 Msa1262900:five_prime_UTR 45.0%
GGGAACCACCACATAATATC+CGG + chr8_2:65866122-65866141 None:intergenic 45.0%
! GTCAACATTCTGAGGATCGT+AGG + chr8_2:65866164-65866183 None:intergenic 45.0%
! TTGGAGCTGCTGGATTTTGT+TGG - chr8_2:65866480-65866499 Msa1262900:intron 45.0%
! TGGAGCTGCTGGATTTTGTT+GGG - chr8_2:65866481-65866500 Msa1262900:intron 45.0%
GCTAAGACTGTGTGTGAACT+TGG - chr8_2:65866618-65866637 Msa1262900:intron 45.0%
ATCACAGTGGACGACATCAA+AGG - chr8_2:65866687-65866706 Msa1262900:intron 45.0%
AGTGGACGACATCAAAGGTA+TGG - chr8_2:65866692-65866711 Msa1262900:five_prime_UTR 45.0%
! TTTTCTACTTTGTCTGGGCC+GGG + chr8_2:65867493-65867512 None:intergenic 45.0%
TAAAGACCCAGAAGCTGTGA+AGG - chr8_2:65867674-65867693 Msa1262900:five_prime_UTR 45.0%
CACGTCAGATCTTGTTGGAT+TGG - chr8_2:65867709-65867728 Msa1262900:five_prime_UTR 45.0%
!!! TAAATAAATCAAATTTTTTT+GGG + chr8_2:65864820-65864839 None:intergenic 5.0%
!!! TTAAATAAATCAAATTTTTT+TGG + chr8_2:65864821-65864840 None:intergenic 5.0%
!!! ATGTTAAATATTTTTTTTTA+GGG + chr8_2:65865209-65865228 None:intergenic 5.0%
GTCAGAGAGAGAAACAACGG+TGG + chr8_2:65863655-65863674 None:intergenic 50.0%
!! ATGGTAGTGGTGAGACAACG+TGG + chr8_2:65863749-65863768 None:intergenic 50.0%
! TATTGATGGTTGAGGGCGAC+GGG + chr8_2:65863783-65863802 None:intergenic 50.0%
GGTCGTGGTGAGGATATTGA+TGG + chr8_2:65863797-65863816 None:intergenic 50.0%
AGAGTAGAAGGATGAGGTCG+TGG + chr8_2:65863812-65863831 None:intergenic 50.0%
!! ATGGTGGTGGTTGTGTGAGT+TGG + chr8_2:65863837-65863856 None:intergenic 50.0%
ACCACCATGCTTCTTCCACT+CGG - chr8_2:65863849-65863868 Msa1262900:CDS 50.0%
AGATCCGAGTGGAAGAAGCA+TGG + chr8_2:65863856-65863875 None:intergenic 50.0%
TATGGTGGTTGAGATCCGAG+TGG + chr8_2:65863867-65863886 None:intergenic 50.0%
CTGAGAAGGAGGAGTTATGG+TGG + chr8_2:65863882-65863901 None:intergenic 50.0%
GGAGACATGATGGTTGTCGT+GGG + chr8_2:65863907-65863926 None:intergenic 50.0%
TGGAGACATGATGGTTGTCG+TGG + chr8_2:65863908-65863927 None:intergenic 50.0%
CTTCTCTCTCTCTCACACAC+TGG + chr8_2:65863960-65863979 None:intergenic 50.0%
! AAGAAGTGCATGGGAGGTTG+CGG - chr8_2:65864148-65864167 Msa1262900:intron 50.0%
!! GAAAACGGGAGTGTTGGACT+TGG - chr8_2:65864921-65864940 Msa1262900:intron 50.0%
GTTGGACTTGGAAGGAAGTG+CGG - chr8_2:65864933-65864952 Msa1262900:intron 50.0%
! CCTTTCGACTTGTAGCTTGC+AGG + chr8_2:65865363-65865382 None:intergenic 50.0%
CCTGCAAGCTACAAGTCGAA+AGG - chr8_2:65865360-65865379 Msa1262900:intron 50.0%
GTGTAGGACCCACTACATGT+GGG + chr8_2:65865489-65865508 None:intergenic 50.0%
TGTGTAGGACCCACTACATG+TGG + chr8_2:65865490-65865509 None:intergenic 50.0%
TGAAGGAGTTCAGAACTGGC+GGG + chr8_2:65865615-65865634 None:intergenic 50.0%
CTGAAGGAGTTCAGAACTGG+CGG + chr8_2:65865616-65865635 None:intergenic 50.0%
CCACTGAAGGAGTTCAGAAC+TGG + chr8_2:65865619-65865638 None:intergenic 50.0%
!! CCAGTTCTGAACTCCTTCAG+TGG - chr8_2:65865616-65865635 Msa1262900:five_prime_UTR 50.0%
GCTGGCCATGTTGCTAAACT+TGG - chr8_2:65865640-65865659 Msa1262900:five_prime_UTR 50.0%
GGCCATGTTGCTAAACTTGG+TGG - chr8_2:65865643-65865662 Msa1262900:five_prime_UTR 50.0%
! AGAATGGCGAAGGTGCAAAG+AGG + chr8_2:65865694-65865713 None:intergenic 50.0%
AATGTCGGAGACGAGGAGAA+TGG + chr8_2:65865710-65865729 None:intergenic 50.0%
! CTCCTCGTCTCCGACATTTT+CGG - chr8_2:65865712-65865731 Msa1262900:five_prime_UTR 50.0%
TACCGAAAATGTCGGAGACG+AGG + chr8_2:65865717-65865736 None:intergenic 50.0%
GTGGTTCCCGACTTCTTCAA+CGG - chr8_2:65866133-65866152 Msa1262900:five_prime_UTR 50.0%
! GGAGCTGCTGGATTTTGTTG+GGG - chr8_2:65866482-65866501 Msa1262900:intron 50.0%
CACGGCAGCTTGAATGAGTT+TGG + chr8_2:65866649-65866668 None:intergenic 50.0%
! TGACCTCTGGAGGAGTAACT+TGG + chr8_2:65867189-65867208 None:intergenic 50.0%
TTCCTAATGTCTCGCATGGC+TGG - chr8_2:65867634-65867653 Msa1262900:five_prime_UTR 50.0%
TCTCGCATGGCTGGACTATA+AGG - chr8_2:65867643-65867662 Msa1262900:five_prime_UTR 50.0%
CTGAAGCCTTCACAGCTTCT+GGG + chr8_2:65867683-65867702 None:intergenic 50.0%
! TCTGAAGCCTTCACAGCTTC+TGG + chr8_2:65867684-65867703 None:intergenic 50.0%
AGAAGCTGTGAAGGCTTCAG+AGG - chr8_2:65867683-65867702 Msa1262900:five_prime_UTR 50.0%
GATGAGAGAGGAACGAGTGG+AGG + chr8_2:65863620-65863639 None:intergenic 55.0%
GGAGATGAGAGAGGAACGAG+TGG + chr8_2:65863623-65863642 None:intergenic 55.0%
GTAGTGGTGAGACAACGTGG+TGG + chr8_2:65863746-65863765 None:intergenic 55.0%
TCACCACTACCATGCCTCAC+CGG - chr8_2:65863756-65863775 Msa1262900:intron 55.0%
AGAAGGATGAGGTCGTGGTG+AGG + chr8_2:65863807-65863826 None:intergenic 55.0%
! GAGTGGAAGAAGCATGGTGG+TGG + chr8_2:65863850-65863869 None:intergenic 55.0%
! TCCGAGTGGAAGAAGCATGG+TGG + chr8_2:65863853-65863872 None:intergenic 55.0%
TGTCGTGGGATCTGAGAAGG+AGG + chr8_2:65863893-65863912 None:intergenic 55.0%
GGTTGTCGTGGGATCTGAGA+AGG + chr8_2:65863896-65863915 None:intergenic 55.0%
!! ACGGGAGTGTTGGACTTGGA+AGG - chr8_2:65864925-65864944 Msa1262900:intron 55.0%
TGAATCTTACAGCGCAGCGG+TGG - chr8_2:65865145-65865164 Msa1262900:intron 55.0%
CTGAACTCCTTCAGTGGTGC+TGG - chr8_2:65865622-65865641 Msa1262900:five_prime_UTR 55.0%
AACATGGCCAGCACCACTGA+AGG + chr8_2:65865632-65865651 None:intergenic 55.0%
GCAGACAAGGTTGCAGCAAC+CGG - chr8_2:65866100-65866119 Msa1262900:five_prime_UTR 55.0%
GGATCGCCGTTGAAGAAGTC+GGG + chr8_2:65866142-65866161 None:intergenic 55.0%
GGGATCGCCGTTGAAGAAGT+CGG + chr8_2:65866143-65866162 None:intergenic 55.0%
! GCTGCTGGATTTTGTTGGGG+TGG - chr8_2:65866485-65866504 Msa1262900:intron 55.0%
CGACCAAGTTACTCCTCCAG+AGG - chr8_2:65867183-65867202 Msa1262900:five_prime_UTR 55.0%
GTCCAGCCATGCGAGACATT+AGG + chr8_2:65867639-65867658 None:intergenic 55.0%
AGCTGTGAAGGCTTCAGAGG+AGG - chr8_2:65867686-65867705 Msa1262900:five_prime_UTR 55.0%
! GGAGGCACGTCAGATCTTGT+TGG - chr8_2:65867704-65867723 Msa1262900:five_prime_UTR 55.0%
!! GAGACAACGTGGTGGTGGTG+AGG + chr8_2:65863738-65863757 None:intergenic 60.0%
GTGGTGAGACAACGTGGTGG+TGG + chr8_2:65863743-65863762 None:intergenic 60.0%
TTAGGATGTGTCGCGGCTGC+AGG - chr8_2:65864246-65864265 Msa1262900:intron 60.0%
GGAGACGAGGAGAATGGCGA+AGG + chr8_2:65865704-65865723 None:intergenic 60.0%
GGACCGGTGAGGCATGGTAG+TGG + chr8_2:65863762-65863781 None:intergenic 65.0%
ATGGTTGAGGGCGACGGGAC+CGG + chr8_2:65863778-65863797 None:intergenic 65.0%
AGTGCATGGGAGGTTGCGGC+AGG - chr8_2:65864152-65864171 Msa1262900:intron 65.0%
GTGCATGGGAGGTTGCGGCA+GGG - chr8_2:65864153-65864172 Msa1262900:intron 65.0%
! GGCGGGTTTGAGCAGCATGC+CGG + chr8_2:65865598-65865617 None:intergenic 65.0%
GCGACGGGACCGGTGAGGCA+TGG + chr8_2:65863768-65863787 None:intergenic 75.0%
TGAGGGCGACGGGACCGGTG+AGG + chr8_2:65863773-65863792 None:intergenic 75.0%
GGGAGGTTGCGGCAGGGACG+AGG - chr8_2:65864159-65864178 Msa1262900:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 65863401 65867752 65863401 ID=Msa1262900;Name=Msa1262900
chr8_2 mRNA 65863401 65867752 65863401 ID=Msa1262900-mRNA-1;Parent=Msa1262900;Name=Msa1262900-mRNA-1;_AED=0.13;_eAED=0.14;_QI=1717|0.87|0.55|1|0.62|0.44|9|0|243
chr8_2 exon 65863401 65863488 65863401 ID=Msa1262900-mRNA-1:exon:21456;Parent=Msa1262900-mRNA-1
chr8_2 exon 65863842 65864007 65863842 ID=Msa1262900-mRNA-1:exon:21455;Parent=Msa1262900-mRNA-1
chr8_2 exon 65864445 65864534 65864445 ID=Msa1262900-mRNA-1:exon:21454;Parent=Msa1262900-mRNA-1
chr8_2 exon 65864647 65864737 65864647 ID=Msa1262900-mRNA-1:exon:21453;Parent=Msa1262900-mRNA-1
chr8_2 exon 65864934 65865060 65864934 ID=Msa1262900-mRNA-1:exon:21452;Parent=Msa1262900-mRNA-1
chr8_2 exon 65865249 65865270 65865249 ID=Msa1262900-mRNA-1:exon:21451;Parent=Msa1262900-mRNA-1
chr8_2 exon 65865420 65866241 65865420 ID=Msa1262900-mRNA-1:exon:21450;Parent=Msa1262900-mRNA-1
chr8_2 exon 65866690 65867403 65866690 ID=Msa1262900-mRNA-1:exon:21449;Parent=Msa1262900-mRNA-1
chr8_2 exon 65867424 65867752 65867424 ID=Msa1262900-mRNA-1:exon:21448;Parent=Msa1262900-mRNA-1
chr8_2 five_prime_UTR 65867424 65867752 65867424 ID=Msa1262900-mRNA-1:five_prime_utr;Parent=Msa1262900-mRNA-1
chr8_2 five_prime_UTR 65866690 65867403 65866690 ID=Msa1262900-mRNA-1:five_prime_utr;Parent=Msa1262900-mRNA-1
chr8_2 five_prime_UTR 65865568 65866241 65865568 ID=Msa1262900-mRNA-1:five_prime_utr;Parent=Msa1262900-mRNA-1
chr8_2 CDS 65865420 65865567 65865420 ID=Msa1262900-mRNA-1:cds;Parent=Msa1262900-mRNA-1
chr8_2 CDS 65865249 65865270 65865249 ID=Msa1262900-mRNA-1:cds;Parent=Msa1262900-mRNA-1
chr8_2 CDS 65864934 65865060 65864934 ID=Msa1262900-mRNA-1:cds;Parent=Msa1262900-mRNA-1
chr8_2 CDS 65864647 65864737 65864647 ID=Msa1262900-mRNA-1:cds;Parent=Msa1262900-mRNA-1
chr8_2 CDS 65864445 65864534 65864445 ID=Msa1262900-mRNA-1:cds;Parent=Msa1262900-mRNA-1
chr8_2 CDS 65863842 65864007 65863842 ID=Msa1262900-mRNA-1:cds;Parent=Msa1262900-mRNA-1
chr8_2 CDS 65863401 65863488 65863401 ID=Msa1262900-mRNA-1:cds;Parent=Msa1262900-mRNA-1
Gene Sequence

>Msa1262900

ATGTTAGGTCCGGCATGCTGCTCAAACCCGCCAGTTCTGAACTCCTTCAGTGGTGCTGGCCATGTTGCTAAACTTGGTGGTGTTGATGCTTATCTCACTGGTTCTCCTCTTTGCACCTTCGCCATTCTCCTCGTCTCCGACATTTTCGGATATAAAGCCCCAATTTTAAGGATGTTTGCAGACAAGGTTGCAGCAACCGGATATTATGTGGTGGTTCCCGACTTCTTCAACGGCGATCCCTACGATCCTCAGAATGTTGACAGACCTATAGATGTTTGGGTGAAAGACCATCAACCAGAGAAAGGTTTTGAAATTTCACAACCAATAATTGAAGCCTTAAAAAGTAAAGGTATTTCTACTATTGGAGCTGCTGGATTTTGTTGGGGTGCTAAGACTGTGTGTGAACTTGGGAAATCCAAACTCATTCAAGCTGCCGTGTTAGCACATCCATCATATATCACAGTGGACGACATCAAAGGTGTTAATATTCCAATTGCTATACTTGGAGCTGAGAACGACCAAGTTACTCCTCCAGAGGTCATAAAACAATTTGAACAAGTTTTGGCTGCTAAATCTGAAGTCAGTGAATCTTCCATTCTATTTTGTTGTTATTTACCATCACACATACATATATACATTTCTGTGTATGACACTAAAGACCCAGAAGCTGTGAAGGCTTCAGAGGAGGCACGTCAGATCTTGTTGGATTGGTTTGATAAACATCTTAAGTGA

Protein sequence

>Msa1262900

MLGPACCSNPPVLNSFSGAGHVAKLGGVDAYLTGSPLCTFAILLVSDIFGYKAPILRMFADKVAATGYYVVVPDFFNGDPYDPQNVDRPIDVWVKDHQPEKGFEISQPIIEALKSKGISTIGAAGFCWGAKTVCELGKSKLIQAAVLAHPSYITVDDIKGVNIPIAILGAENDQVTPPEVIKQFEQVLAAKSEVSESSILFCCYLPSHIHIYISVYDTKDPEAVKASEEARQILLDWFDKHLK*