Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134410 | XP_003621050.1 | 98.871 | 443 | 5 | 0 | 1 | 443 | 1 | 443 | 0.0 | 895 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134410 | sp|A0LTY8|TAL_ACIC1 | 51.594 | 345 | 159 | 5 | 90 | 427 | 12 | 355 | 5.28e-109 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134410 | G7KXR2 | 98.871 | 443 | 5 | 0 | 1 | 443 | 1 | 443 | 0.0 | 895 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1134410 | -0.810198 | 1.298437e-50 | -8.615850e-47 |
| Msa0021570 | Msa1134410 | -0.807483 | 4.944251e-50 | -8.615850e-47 |
| Msa0027020 | Msa1134410 | -0.830449 | 2.917948e-55 | -8.615850e-47 |
| Msa0028940 | Msa1134410 | -0.801659 | 8.111660e-49 | -8.615850e-47 |
| Msa0037040 | Msa1134410 | -0.803278 | 3.762673e-49 | -8.615850e-47 |
| Msa0042520 | Msa1134410 | -0.839002 | 2.055575e-57 | -8.615850e-47 |
| Msa0046020 | Msa1134410 | -0.800789 | 1.222126e-48 | -8.615850e-47 |
| Msa0067370 | Msa1134410 | -0.802016 | 6.852390e-49 | -8.615850e-47 |
| Msa0074860 | Msa1134410 | -0.815969 | 7.038248e-52 | -8.615850e-47 |
| Msa0085450 | Msa1134410 | 0.819117 | 1.374328e-52 | -8.615850e-47 |
| Msa0087550 | Msa1134410 | 0.800325 | 1.519427e-48 | -8.615850e-47 |
| Msa0093360 | Msa1134410 | -0.800914 | 1.152540e-48 | -8.615850e-47 |
| Msa0116780 | Msa1134410 | -0.821298 | 4.348949e-53 | -8.615850e-47 |
| Msa0603310 | Msa1134410 | 0.809171 | 2.158707e-50 | -8.615850e-47 |
| Msa0605150 | Msa1134410 | -0.809570 | 1.772783e-50 | -8.615850e-47 |
| Msa0605210 | Msa1134410 | -0.809555 | 1.785641e-50 | -8.615850e-47 |
| Msa0606340 | Msa1134410 | -0.805925 | 1.054743e-49 | -8.615850e-47 |
| Msa0606350 | Msa1134410 | -0.804541 | 2.055845e-49 | -8.615850e-47 |
| Msa0608720 | Msa1134410 | -0.803309 | 3.707297e-49 | -8.615850e-47 |
| Msa0622450 | Msa1134410 | -0.803885 | 2.815696e-49 | -8.615850e-47 |
| Msa0644340 | Msa1134410 | 0.810020 | 1.418696e-50 | -8.615850e-47 |
| Msa0646310 | Msa1134410 | -0.817405 | 3.354506e-52 | -8.615850e-47 |
| Msa0656570 | Msa1134410 | -0.806080 | 9.784736e-50 | -8.615850e-47 |
| Msa0667670 | Msa1134410 | -0.835802 | 1.357216e-56 | -8.615850e-47 |
| Msa0673620 | Msa1134410 | -0.834252 | 3.337878e-56 | -8.615850e-47 |
| Msa0682110 | Msa1134410 | 0.801553 | 8.530339e-49 | -8.615850e-47 |
| Msa0682160 | Msa1134410 | 0.815107 | 1.095105e-51 | -8.615850e-47 |
| Msa0690100 | Msa1134410 | -0.811068 | 8.423879e-51 | -8.615850e-47 |
| Msa0695250 | Msa1134410 | -0.822653 | 2.110892e-53 | -8.615850e-47 |
| Msa0700930 | Msa1134410 | -0.800571 | 1.354033e-48 | -8.615850e-47 |
| Msa0704790 | Msa1134410 | -0.801424 | 9.063428e-49 | -8.615850e-47 |
| Msa0713570 | Msa1134410 | -0.807998 | 3.842762e-50 | -8.615850e-47 |
| Msa0717540 | Msa1134410 | -0.800549 | 1.368310e-48 | -8.615850e-47 |
| Msa0729120 | Msa1134410 | -0.801675 | 8.052522e-49 | -8.615850e-47 |
| Msa0754020 | Msa1134410 | -0.805095 | 1.574769e-49 | -8.615850e-47 |
| Msa0755550 | Msa1134410 | -0.803646 | 3.156976e-49 | -8.615850e-47 |
| Msa0758880 | Msa1134410 | -0.811644 | 6.313816e-51 | -8.615850e-47 |
| Msa0768240 | Msa1134410 | -0.806775 | 6.983911e-50 | -8.615850e-47 |
| Msa0793130 | Msa1134410 | -0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0795910 | Msa1134410 | -0.803875 | 2.829636e-49 | -8.615850e-47 |
| Msa0801920 | Msa1134410 | -0.813803 | 2.127244e-51 | -8.615850e-47 |
| Msa0826820 | Msa1134410 | -0.820257 | 7.548440e-53 | -8.615850e-47 |
| Msa0833030 | Msa1134410 | -0.811138 | 8.133735e-51 | -8.615850e-47 |
| Msa0833360 | Msa1134410 | -0.803346 | 3.642569e-49 | -8.615850e-47 |
| Msa0835050 | Msa1134410 | -0.809444 | 1.886411e-50 | -8.615850e-47 |
| Msa0838120 | Msa1134410 | -0.813662 | 2.284958e-51 | -8.615850e-47 |
| Msa0840450 | Msa1134410 | -0.800023 | 1.750171e-48 | -8.615850e-47 |
| Msa0127350 | Msa1134410 | -0.801294 | 9.635594e-49 | -8.615850e-47 |
| Msa0158890 | Msa1134410 | -0.823097 | 1.664141e-53 | -8.615850e-47 |
| Msa0164580 | Msa1134410 | -0.817054 | 4.023230e-52 | -8.615850e-47 |
| Msa0167160 | Msa1134410 | -0.822784 | 1.967808e-53 | -8.615850e-47 |
| Msa0167570 | Msa1134410 | -0.808599 | 2.862090e-50 | -8.615850e-47 |
| Msa0172310 | Msa1134410 | -0.832887 | 7.312539e-56 | -8.615850e-47 |
| Msa0180820 | Msa1134410 | 0.811383 | 7.197437e-51 | -8.615850e-47 |
| Msa0198280 | Msa1134410 | -0.801075 | 1.068345e-48 | -8.615850e-47 |
| Msa0211460 | Msa1134410 | 0.818430 | 1.967937e-52 | -8.615850e-47 |
| Msa0212950 | Msa1134410 | -0.814346 | 1.614511e-51 | -8.615850e-47 |
| Msa0225080 | Msa1134410 | -0.807949 | 3.936361e-50 | -8.615850e-47 |
| Msa0225280 | Msa1134410 | -0.818189 | 2.232361e-52 | -8.615850e-47 |
| Msa0232160 | Msa1134410 | -0.803826 | 2.896562e-49 | -8.615850e-47 |
| Msa0238530 | Msa1134410 | -0.809429 | 1.900553e-50 | -8.615850e-47 |
| Msa0369080 | Msa1134410 | -0.814952 | 1.185508e-51 | -8.615850e-47 |
| Msa0386230 | Msa1134410 | -0.808342 | 3.246373e-50 | -8.615850e-47 |
| Msa0403740 | Msa1134410 | -0.800675 | 1.289468e-48 | -8.615850e-47 |
| Msa0415760 | Msa1134410 | -0.813206 | 2.878714e-51 | -8.615850e-47 |
| Msa0427600 | Msa1134410 | -0.804055 | 2.595622e-49 | -8.615850e-47 |
| Msa0428270 | Msa1134410 | -0.813784 | 2.147726e-51 | -8.615850e-47 |
| Msa0436660 | Msa1134410 | -0.804262 | 2.350301e-49 | -8.615850e-47 |
| Msa0437820 | Msa1134410 | -0.802615 | 5.157034e-49 | -8.615850e-47 |
| Msa0450890 | Msa1134410 | -0.816390 | 5.667176e-52 | -8.615850e-47 |
| Msa0450920 | Msa1134410 | -0.805625 | 1.219307e-49 | -8.615850e-47 |
| Msa0459930 | Msa1134410 | 0.800445 | 1.436593e-48 | -8.615850e-47 |
| Msa0460510 | Msa1134410 | -0.803581 | 3.255845e-49 | -8.615850e-47 |
| Msa0461620 | Msa1134410 | -0.800416 | 1.455898e-48 | -8.615850e-47 |
| Msa0463030 | Msa1134410 | -0.808525 | 2.967803e-50 | -8.615850e-47 |
| Msa0469770 | Msa1134410 | -0.806926 | 6.487382e-50 | -8.615850e-47 |
| Msa0474660 | Msa1134410 | -0.802890 | 4.526096e-49 | -8.615850e-47 |
| Msa0993590 | Msa1134410 | -0.804998 | 1.650107e-49 | -8.615850e-47 |
| Msa1004290 | Msa1134410 | 0.940090 | 4.221711e-100 | -8.615850e-47 |
| Msa1020160 | Msa1134410 | -0.812318 | 4.502957e-51 | -8.615850e-47 |
| Msa1028890 | Msa1134410 | -0.809898 | 1.507268e-50 | -8.615850e-47 |
| Msa1031190 | Msa1134410 | -0.805302 | 1.425552e-49 | -8.615850e-47 |
| Msa1032790 | Msa1134410 | -0.819623 | 1.053787e-52 | -8.615850e-47 |
| Msa1068010 | Msa1134410 | -0.803240 | 3.831058e-49 | -8.615850e-47 |
| Msa1070370 | Msa1134410 | -0.804735 | 1.872903e-49 | -8.615850e-47 |
| Msa1080130 | Msa1134410 | 0.804206 | 2.413980e-49 | -8.615850e-47 |
| Msa1080820 | Msa1134410 | 0.801875 | 7.323291e-49 | -8.615850e-47 |
| Msa1088000 | Msa1134410 | -0.800468 | 1.420917e-48 | -8.615850e-47 |
| Msa0253230 | Msa1134410 | -0.818035 | 2.418318e-52 | -8.615850e-47 |
| Msa0259450 | Msa1134410 | -0.800982 | 1.116249e-48 | -8.615850e-47 |
| Msa0261350 | Msa1134410 | -0.807380 | 5.200028e-50 | -8.615850e-47 |
| Msa0266150 | Msa1134410 | -0.811052 | 8.487645e-51 | -8.615850e-47 |
| Msa0266330 | Msa1134410 | -0.817638 | 2.972228e-52 | -8.615850e-47 |
| Msa0299130 | Msa1134410 | -0.812915 | 3.333469e-51 | -8.615850e-47 |
| Msa0305630 | Msa1134410 | -0.801494 | 8.767212e-49 | -8.615850e-47 |
| Msa0310270 | Msa1134410 | -0.822874 | 1.875674e-53 | -8.615850e-47 |
| Msa0340700 | Msa1134410 | -0.816607 | 5.069247e-52 | -8.615850e-47 |
| Msa0341950 | Msa1134410 | -0.814224 | 1.718034e-51 | -8.615850e-47 |
| Msa0358750 | Msa1134410 | -0.808194 | 3.492011e-50 | -8.615850e-47 |
| Msa0364030 | Msa1134410 | -0.801414 | 9.104635e-49 | -8.615850e-47 |
| Msa1107220 | Msa1134410 | 0.808121 | 3.619138e-50 | -8.615850e-47 |
| Msa1117770 | Msa1134410 | -0.802117 | 6.533188e-49 | -8.615850e-47 |
| Msa1119420 | Msa1134410 | -0.808098 | 3.659849e-50 | -8.615850e-47 |
| Msa1121720 | Msa1134410 | -0.806991 | 6.286831e-50 | -8.615850e-47 |
| Msa1129120 | Msa1134410 | -0.826783 | 2.244840e-54 | -8.615850e-47 |
| Msa1129510 | Msa1134410 | -0.800471 | 1.418956e-48 | -8.615850e-47 |
| Msa1130150 | Msa1134410 | -0.807287 | 5.442048e-50 | -8.615850e-47 |
| Msa1132880 | Msa1134410 | -0.805084 | 1.583403e-49 | -8.615850e-47 |
| Msa1134410 | Msa1156100 | -0.807378 | 5.204796e-50 | -8.615850e-47 |
| Msa1134410 | Msa1156120 | -0.824258 | 8.898251e-54 | -8.615850e-47 |
| Msa1134410 | Msa1158180 | -0.808869 | 2.505893e-50 | -8.615850e-47 |
| Msa1134410 | Msa1174280 | 0.804325 | 2.280384e-49 | -8.615850e-47 |
| Msa1134410 | Msa1184100 | -0.807173 | 5.751435e-50 | -8.615850e-47 |
| Msa1134410 | Msa1194480 | -0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa1134410 | Msa1199540 | -0.824469 | 7.935022e-54 | -8.615850e-47 |
| Msa1134410 | Msa1202110 | 0.803712 | 3.058640e-49 | -8.615850e-47 |
| Msa1134410 | Msa1203320 | -0.806978 | 6.325519e-50 | -8.615850e-47 |
| Msa1134410 | Msa1212070 | -0.801274 | 9.727548e-49 | -8.615850e-47 |
| Msa1134410 | Msa1212150 | -0.807343 | 5.293579e-50 | -8.615850e-47 |
| Msa1134410 | Msa1222900 | -0.804156 | 2.472981e-49 | -8.615850e-47 |
| Msa1134410 | Msa1228260 | -0.816762 | 4.679669e-52 | -8.615850e-47 |
| Msa1134410 | Msa1235620 | -0.817042 | 4.047329e-52 | -8.615850e-47 |
| Msa1134410 | Msa1239210 | 0.814035 | 1.890926e-51 | -8.615850e-47 |
| Msa1134410 | Msa1254870 | 0.805653 | 1.202962e-49 | -8.615850e-47 |
| Msa1134410 | Msa1260640 | -0.824503 | 7.790141e-54 | -8.615850e-47 |
| Msa1134410 | Msa1266750 | -0.802172 | 6.364686e-49 | -8.615850e-47 |
| Msa1134410 | Msa1271220 | -0.818037 | 2.415149e-52 | -8.615850e-47 |
| Msa1134410 | Msa1279200 | -0.826632 | 2.438380e-54 | -8.615850e-47 |
| Msa1134410 | Msa1291070 | -0.813289 | 2.759569e-51 | -8.615850e-47 |
| Msa1134410 | Msa1303690 | -0.809288 | 2.037283e-50 | -8.615850e-47 |
| Msa1134410 | Msa1308430 | -0.815042 | 1.132051e-51 | -8.615850e-47 |
| Msa1134410 | Msa1315880 | -0.808350 | 3.234349e-50 | -8.615850e-47 |
| Msa1134410 | Msa1328430 | 0.805392 | 1.364562e-49 | -8.615850e-47 |
| Msa1134410 | Msa1328680 | -0.817693 | 2.889416e-52 | -8.615850e-47 |
| Msa1134410 | Msa1341710 | -0.804464 | 2.133080e-49 | -8.615850e-47 |
| Msa1134410 | Msa1348180 | -0.814229 | 1.713638e-51 | -8.615850e-47 |
| Msa1134410 | Msa1350590 | -0.815616 | 8.440593e-52 | -8.615850e-47 |
| Msa1134410 | Msa1356100 | -0.806918 | 6.514520e-50 | -8.615850e-47 |
| Msa1134410 | Msa1363170 | -0.806316 | 8.727499e-50 | -8.615850e-47 |
| Msa1134410 | Msa1372460 | -0.815248 | 1.019038e-51 | -8.615850e-47 |
| Msa1134410 | Msa1372470 | -0.802938 | 4.424205e-49 | -8.615850e-47 |
| Msa1134410 | Msa1373310 | -0.806250 | 9.012466e-50 | -8.615850e-47 |
| Msa1134410 | Msa1373420 | -0.801272 | 9.739103e-49 | -8.615850e-47 |
| Msa1134410 | Msa1377980 | -0.806938 | 6.450908e-50 | -8.615850e-47 |
| Msa1134410 | Msa1386910 | -0.809124 | 2.209188e-50 | -8.615850e-47 |
| Msa1134410 | Msa1388720 | -0.826722 | 2.320732e-54 | -8.615850e-47 |
| Msa1134410 | Msa1408230 | -0.808680 | 2.749224e-50 | -8.615850e-47 |
| Msa1134410 | Msa1408280 | -0.807997 | 3.845134e-50 | -8.615850e-47 |
| Msa1134410 | Msa1410500 | -0.807631 | 4.600686e-50 | -8.615850e-47 |
| Msa1134410 | Msa1415510 | -0.808749 | 2.657950e-50 | -8.615850e-47 |
| Msa1134410 | Msa1418840 | -0.803816 | 2.909886e-49 | -8.615850e-47 |
| Msa1134410 | Msa1423560 | -0.802882 | 4.542914e-49 | -8.615850e-47 |
| Msa1134410 | Msa1424490 | -0.808858 | 2.519576e-50 | -8.615850e-47 |
| Msa1134410 | Msa1432730 | -0.801658 | 8.116160e-49 | -8.615850e-47 |
| Msa1134410 | Msa1434860 | -0.815667 | 8.219970e-52 | -8.615850e-47 |
| Msa1134410 | Msa1452800 | -0.800836 | 1.195621e-48 | -8.615850e-47 |
| Msa1134410 | Msa1461840 | -0.806461 | 8.134343e-50 | -8.615850e-47 |
| Msa0497140 | Msa1134410 | -0.814694 | 1.352486e-51 | -8.615850e-47 |
| Msa0500580 | Msa1134410 | -0.802487 | 5.482241e-49 | -8.615850e-47 |
| Msa0506700 | Msa1134410 | -0.809688 | 1.671692e-50 | -8.615850e-47 |
| Msa0512930 | Msa1134410 | -0.801351 | 9.379176e-49 | -8.615850e-47 |
| Msa0517820 | Msa1134410 | -0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0531270 | Msa1134410 | -0.804342 | 2.261879e-49 | -8.615850e-47 |
| Msa0537960 | Msa1134410 | -0.824573 | 7.503052e-54 | -8.615850e-47 |
| Msa0538020 | Msa1134410 | -0.805183 | 1.509300e-49 | -8.615850e-47 |
| Msa0544390 | Msa1134410 | -0.813755 | 2.180372e-51 | -8.615850e-47 |
| Msa0549700 | Msa1134410 | -0.811097 | 8.300039e-51 | -8.615850e-47 |
| Msa0550980 | Msa1134410 | -0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa0550990 | Msa1134410 | -0.815177 | 1.056479e-51 | -8.615850e-47 |
| Msa0554700 | Msa1134410 | -0.818461 | 1.937141e-52 | -8.615850e-47 |
| Msa0557440 | Msa1134410 | -0.803833 | 2.886112e-49 | -8.615850e-47 |
| Msa0558800 | Msa1134410 | -0.802319 | 5.935477e-49 | -8.615850e-47 |
| Msa0565370 | Msa1134410 | -0.818494 | 1.903434e-52 | -8.615850e-47 |
| Msa0565430 | Msa1134410 | -0.822672 | 2.089637e-53 | -8.615850e-47 |
| Msa0567190 | Msa1134410 | -0.813348 | 2.679398e-51 | -8.615850e-47 |
| Msa0572730 | Msa1134410 | -0.803214 | 3.879656e-49 | -8.615850e-47 |
| Msa0580410 | Msa1134410 | -0.802989 | 4.316772e-49 | -8.615850e-47 |
| Msa0580890 | Msa1134410 | -0.804074 | 2.572187e-49 | -8.615850e-47 |
| Msa0582270 | Msa1134410 | -0.805946 | 1.044374e-49 | -8.615850e-47 |
| Msa0583270 | Msa1134410 | -0.801933 | 7.125096e-49 | -8.615850e-47 |
| Msa0597370 | Msa1134410 | -0.801949 | 7.072296e-49 | -8.615850e-47 |
| Msa0865500 | Msa1134410 | -0.815132 | 1.081262e-51 | -8.615850e-47 |
| Msa0866310 | Msa1134410 | -0.802008 | 6.876942e-49 | -8.615850e-47 |
| Msa0882480 | Msa1134410 | -0.821596 | 3.712832e-53 | -8.615850e-47 |
| Msa0929440 | Msa1134410 | -0.819160 | 1.343493e-52 | -8.615850e-47 |
| Msa0945160 | Msa1134410 | -0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0958960 | Msa1134410 | -0.807059 | 6.081921e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134410 | MtrunA17_Chr7g0214741 | 98.871 | 443 | 5 | 0 | 1 | 443 | 1 | 443 | 0.0 | 895 |
| Msa1134410 | MtrunA17_Chr8g0385641 | 69.149 | 376 | 115 | 1 | 62 | 436 | 34 | 409 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134410 | AT5G13420.1 | 79.853 | 407 | 82 | 0 | 36 | 442 | 31 | 437 | 0.0 | 657 |
Find 131 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACAGGAGCCTTTGCTTCT+TGG | 0.121680 | 7_4:+885699 | None:intergenic |
| TTATATGTTGCTCCTCTTAT+TGG | 0.160550 | 7_4:-885637 | Msa1134410:CDS |
| CCGCGTAGATCAAGGGCTTC+TGG | 0.192006 | 7_4:+885916 | None:intergenic |
| GACAAGATGCTTGAGAAAAT+TGG | 0.255255 | 7_4:-885943 | Msa1134410:CDS |
| CATTGTTAGTTGGAAATTCT+TGG | 0.259811 | 7_4:-884669 | Msa1134410:three_prime_UTR |
| CACAGATGATTTATCATTCT+AGG | 0.278158 | 7_4:+884701 | None:intergenic |
| ACATAAAATGACATCAGATT+TGG | 0.292995 | 7_4:+884417 | None:intergenic |
| TTGGACGGTCTGGAGGCATC+TGG | 0.296116 | 7_4:-886033 | Msa1134410:CDS |
| CGCGTAGATCAAGGGCTTCT+GGG | 0.316493 | 7_4:+885917 | None:intergenic |
| AGCAGTAGCCCAAGCAGCAC+TGG | 0.319222 | 7_4:-885785 | Msa1134410:CDS |
| TGCATGTGTCCCTTCAATTA+AGG | 0.343064 | 7_4:-886609 | Msa1134410:CDS |
| CTTATTGAAAGTGGTGTTAG+AGG | 0.347970 | 7_4:-887741 | Msa1134410:CDS |
| GATCTGGATCGAAGAGATTC+TGG | 0.349569 | 7_4:+889549 | None:intergenic |
| TCCAATCAATACCCAACTTC+TGG | 0.350106 | 7_4:+884948 | None:intergenic |
| TGAAGAACCGTCCTCTTTGC+AGG | 0.353042 | 7_4:+887837 | None:intergenic |
| AATAAAAGACAGTGGCTAAT+GGG | 0.353630 | 7_4:-884753 | Msa1134410:three_prime_UTR |
| CAAGTGAGGTGTGAACTTTA+TGG | 0.357425 | 7_4:-884816 | Msa1134410:exon |
| TTGGGCCAGAAAATTTCTTT+TGG | 0.367465 | 7_4:+885749 | None:intergenic |
| GTGCTTACAATGATCAATTC+AGG | 0.381631 | 7_4:-887421 | Msa1134410:intron |
| TTACAGCTTCATATCTTTCA+AGG | 0.387825 | 7_4:+886067 | None:intergenic |
| CCTTCTCCTGCAGTGAATCC+AGG | 0.391080 | 7_4:+884861 | None:intergenic |
| TCCAGAAGTTGGGTATTGAT+TGG | 0.397913 | 7_4:-884949 | Msa1134410:CDS |
| AAGACATTGACAGTGCATAC+TGG | 0.398567 | 7_4:-886832 | Msa1134410:CDS |
| TGTTGGTTCACAGCTTGAAT+TGG | 0.398912 | 7_4:-884921 | Msa1134410:CDS |
| CTGGTAAGCCAGTGCTGCTT+GGG | 0.405777 | 7_4:+885777 | None:intergenic |
| TAATAAAAGACAGTGGCTAA+TGG | 0.406015 | 7_4:-884754 | Msa1134410:three_prime_UTR |
| GGAATCTTAATATACACATT+GGG | 0.407298 | 7_4:+886641 | None:intergenic |
| GAACCATAGAAGCTGCAAAA+TGG | 0.407939 | 7_4:-886685 | Msa1134410:CDS |
| TAATCTCTGCCGACCCGTTA+CGG | 0.408310 | 7_4:-887775 | Msa1134410:CDS |
| TGATGCTTACTTGGACGGTC+TGG | 0.408914 | 7_4:-886043 | Msa1134410:CDS |
| GCTGGTAAGCCAGTGCTGCT+TGG | 0.416878 | 7_4:+885776 | None:intergenic |
| CTAACACCACTTTCAATAAG+AGG | 0.417790 | 7_4:+887744 | None:intergenic |
| TGTAACAATTCTCATTTCAA+TGG | 0.418964 | 7_4:-889628 | Msa1134410:exon |
| AGCTGTAATTGATGCTTACT+TGG | 0.425218 | 7_4:-886052 | Msa1134410:CDS |
| GCGATAACTTCCTTAATTGA+AGG | 0.430140 | 7_4:+886599 | None:intergenic |
| TAACTAGAGCTTCCCACCTT+GGG | 0.431657 | 7_4:+885731 | None:intergenic |
| TGCAAAATGGCTTCATAAAG+TGG | 0.434093 | 7_4:-886672 | Msa1134410:CDS |
| TTACCTTGCCGCGTAGATCA+AGG | 0.439121 | 7_4:+885908 | None:intergenic |
| AATAAGAGGAGCAACATATA+AGG | 0.440098 | 7_4:+885639 | None:intergenic |
| GAAAGCCTTTGACAGCCTCC+TGG | 0.444184 | 7_4:-884879 | Msa1134410:CDS |
| AAAGAAGCGCGGTTTGTGTT+TGG | 0.445528 | 7_4:+889573 | None:intergenic |
| TGCTCACAAACAGATGGAAA+TGG | 0.453362 | 7_4:-887864 | Msa1134410:CDS |
| ATGTGATGGCTTACGGTGTC+GGG | 0.454815 | 7_4:+885613 | None:intergenic |
| GGGACACATGCAGCTGTAGC+TGG | 0.457283 | 7_4:+886620 | None:intergenic |
| CACGTTCACACTTATTCCAT+TGG | 0.457925 | 7_4:+886577 | None:intergenic |
| TTGCACGGTGCAATTATTGC+AGG | 0.459837 | 7_4:+884577 | None:intergenic |
| AGTTTAAGTAGTACACCTTT+CGG | 0.462050 | 7_4:-889919 | Msa1134410:five_prime_UTR |
| TGCAGGGAACTTGTGCAAGC+AGG | 0.463242 | 7_4:-886857 | Msa1134410:intron |
| TCGATCACGGTGCCGTAGCC+AGG | 0.469199 | 7_4:-885018 | Msa1134410:CDS |
| TACAATGCTATCCAGAAGTT+GGG | 0.474420 | 7_4:-884959 | Msa1134410:CDS |
| AAATCATTTGTATTGTTGAA+AGG | 0.476234 | 7_4:+889507 | None:intergenic |
| ATACAATGCTATCCAGAAGT+TGG | 0.476685 | 7_4:-884960 | Msa1134410:CDS |
| GATAGTGATACATTGTTAGT+TGG | 0.477338 | 7_4:-884679 | Msa1134410:three_prime_UTR |
| AGAGGAATCAGATCCGTAAC+GGG | 0.477720 | 7_4:+887762 | None:intergenic |
| TTAACTAGAGCTTCCCACCT+TGG | 0.478200 | 7_4:+885730 | None:intergenic |
| GGAGCAACATATAAGGTGTC+AGG | 0.483934 | 7_4:+885646 | None:intergenic |
| TGAGTCTATTGTCCTGGCTA+CGG | 0.486428 | 7_4:+885006 | None:intergenic |
| CCAAGAAGCAAAGGCTCCTG+TGG | 0.487273 | 7_4:-885699 | Msa1134410:CDS |
| CTGATTCCTCTTATTGAAAG+TGG | 0.490876 | 7_4:-887750 | Msa1134410:CDS |
| CGATAAATGCTTGAAGTGCT+TGG | 0.491108 | 7_4:+885038 | None:intergenic |
| TGCATTTGAGTCTATTGTCC+TGG | 0.491718 | 7_4:+885000 | None:intergenic |
| GGTATTGATTGGAGCTATGT+TGG | 0.495472 | 7_4:-884938 | Msa1134410:CDS |
| TCAATTTATGATCAAACTGA+TGG | 0.501880 | 7_4:-886764 | Msa1134410:CDS |
| CGATAACTTCCTTAATTGAA+GGG | 0.507817 | 7_4:+886600 | None:intergenic |
| ATTAAGGAAGTTATCGCCAA+TGG | 0.509849 | 7_4:-886593 | Msa1134410:CDS |
| CAGCCTCCTGGATTCACTGC+AGG | 0.514881 | 7_4:-884867 | Msa1134410:CDS |
| TGGAATCTTAATATACACAT+TGG | 0.517086 | 7_4:+886640 | None:intergenic |
| TTTCTGTTGAAGTATCTCCT+AGG | 0.521652 | 7_4:-886727 | Msa1134410:CDS |
| AGAAACAAGGGCAGAGTCCA+TGG | 0.521731 | 7_4:-887803 | Msa1134410:CDS |
| TATAAGGTGTCAGGATAGGC+AGG | 0.522356 | 7_4:+885655 | None:intergenic |
| CATGATCTTTATGAGAAACA+AGG | 0.525914 | 7_4:-887816 | Msa1134410:CDS |
| CCTGGATTCACTGCAGGAGA+AGG | 0.526429 | 7_4:-884861 | Msa1134410:CDS |
| TACCTTGCCGCGTAGATCAA+GGG | 0.526893 | 7_4:+885909 | None:intergenic |
| AATGCTTGAAGTGCTTGGTC+TGG | 0.533962 | 7_4:+885043 | None:intergenic |
| AGACATTGACAGTGCATACT+GGG | 0.538449 | 7_4:-886831 | Msa1134410:CDS |
| ACCTCAAAGACGTTACAAAA+CGG | 0.539336 | 7_4:+889439 | None:intergenic |
| CTCGTTCTTTGTCAGTCGAG+TGG | 0.539822 | 7_4:-885977 | Msa1134410:CDS |
| TGCTTATATTAGTGACCGAA+AGG | 0.540687 | 7_4:+889904 | None:intergenic |
| TAACGCTGGTTGAAGCCCAC+AGG | 0.542262 | 7_4:+885683 | None:intergenic |
| GTAATGTATGATGCCGCGTA+TGG | 0.546455 | 7_4:-884779 | Msa1134410:three_prime_UTR |
| TGGTGTTGTGATCTTAGAAA+CGG | 0.546780 | 7_4:+889593 | None:intergenic |
| GAAGGCAAAATCTCTTAAGC+TGG | 0.547270 | 7_4:-884843 | Msa1134410:CDS |
| TACAGCTTCATATCTTTCAA+GGG | 0.547625 | 7_4:+886068 | None:intergenic |
| GCAGGGAACTTGTGCAAGCA+GGG | 0.547808 | 7_4:-886856 | Msa1134410:intron |
| AATGTGATGGCTTACGGTGT+CGG | 0.552602 | 7_4:+885612 | None:intergenic |
| GTAATTGATGCTTACTTGGA+CGG | 0.553368 | 7_4:-886048 | Msa1134410:CDS |
| TGGACGGTCTGGAGGCATCT+GGG | 0.554082 | 7_4:-886032 | Msa1134410:CDS |
| GGTTCACAGCTTGAATTGGA+AGG | 0.554895 | 7_4:-884917 | Msa1134410:CDS |
| TTGCTTATATTAATGACAAG+AGG | 0.557149 | 7_4:-889786 | Msa1134410:five_prime_UTR |
| CTTAAGCTGGTCAGCAAGTG+AGG | 0.557674 | 7_4:-884830 | Msa1134410:exon |
| TCAGTATCCTCAGCAAGCCT+AGG | 0.564022 | 7_4:+886710 | None:intergenic |
| TGCTTATATTAATGACAAGA+GGG | 0.567362 | 7_4:-889785 | Msa1134410:five_prime_UTR |
| TGCTTACTTGGACGGTCTGG+AGG | 0.568623 | 7_4:-886040 | Msa1134410:CDS |
| TGAATCCAGGAGGCTGTCAA+AGG | 0.570972 | 7_4:+884874 | None:intergenic |
| TCAAATGCATCTGAAGCTGA+AGG | 0.573568 | 7_4:-884986 | Msa1134410:CDS |
| TTGAAGTGCTTGGTCTGGCA+TGG | 0.574976 | 7_4:+885048 | None:intergenic |
| GCGTAGATCAAGGGCTTCTG+GGG | 0.575312 | 7_4:+885918 | None:intergenic |
| AACATATAAGGTGTCAGGAT+AGG | 0.576598 | 7_4:+885651 | None:intergenic |
| ACGGTGTCGGGTCCAATAAG+AGG | 0.578637 | 7_4:+885625 | None:intergenic |
| ATTAGATGCTCACAAACAGA+TGG | 0.579685 | 7_4:-887870 | Msa1134410:CDS |
| GATCAAACTGATGGAGGTGA+TGG | 0.584623 | 7_4:-886755 | Msa1134410:CDS |
| AAAACAGCATACATAGTACA+TGG | 0.585030 | 7_4:+884616 | None:intergenic |
| AGCCCTTGATCTACGCGGCA+AGG | 0.585764 | 7_4:-885911 | Msa1134410:intron |
| TGCACGGTGCAATTATTGCA+GGG | 0.588146 | 7_4:+884578 | None:intergenic |
| CTTCAAGCATTTATCGATCA+CGG | 0.590101 | 7_4:-885031 | Msa1134410:CDS |
| AAGAGGAATCAGATCCGTAA+CGG | 0.596662 | 7_4:+887761 | None:intergenic |
| CAAGAAGCAAAGGCTCCTGT+GGG | 0.597921 | 7_4:-885698 | Msa1134410:CDS |
| ATGATCTTTATGAGAAACAA+GGG | 0.602950 | 7_4:-887815 | Msa1134410:CDS |
| ATAAAAGACAGTGGCTAATG+GGG | 0.608907 | 7_4:-884752 | Msa1134410:three_prime_UTR |
| AGTCGAGATTTAAAATTGCA+CGG | 0.613824 | 7_4:+884562 | None:intergenic |
| ATTTATGATCAAACTGATGG+AGG | 0.617182 | 7_4:-886761 | Msa1134410:CDS |
| TGGAGTTCCTGCAAAGAGGA+CGG | 0.623273 | 7_4:-887844 | Msa1134410:CDS |
| ATACTGGGAACTTGTAGTGA+AGG | 0.629191 | 7_4:-886816 | Msa1134410:CDS |
| TACAACTATCTCGTTCACGC+TGG | 0.631213 | 7_4:+889647 | None:intergenic |
| AGGCTTGCTGAGGATACTGA+AGG | 0.632568 | 7_4:-886707 | Msa1134410:CDS |
| CTGATCTAAATCAATAGCAG+AGG | 0.634616 | 7_4:-884537 | Msa1134410:three_prime_UTR |
| CGGCAGAGATTATCATACCA+TGG | 0.638956 | 7_4:+887786 | None:intergenic |
| GAATCTTAATATACACATTG+GGG | 0.640842 | 7_4:+886642 | None:intergenic |
| TAATGTATGATGCCGCGTAT+GGG | 0.643352 | 7_4:-884778 | Msa1134410:three_prime_UTR |
| GAAATGGAGTTCCTGCAAAG+AGG | 0.646124 | 7_4:-887848 | Msa1134410:CDS |
| GAATCAGATCCGTAACGGGT+CGG | 0.659162 | 7_4:+887766 | None:intergenic |
| CAACACTTGTGACTCTAGAG+AGG | 0.660116 | 7_4:+886001 | None:intergenic |
| ATAGGCAGGATTCTTAACGC+TGG | 0.660124 | 7_4:+885669 | None:intergenic |
| AGTATCTCCTAGGCTTGCTG+AGG | 0.671909 | 7_4:-886717 | Msa1134410:CDS |
| GAGATTCTGGTAAAGAAGCG+CGG | 0.678266 | 7_4:+889562 | None:intergenic |
| CACTCGACTGACAAAGAACG+AGG | 0.684880 | 7_4:+885978 | None:intergenic |
| TCTCCTGCAGTGAATCCAGG+AGG | 0.685827 | 7_4:+884864 | None:intergenic |
| TTCTTAAAGAAGAAGCAGAG+AGG | 0.689999 | 7_4:+889475 | None:intergenic |
| CCAGAAGCCCTTGATCTACG+CGG | 0.702071 | 7_4:-885916 | Msa1134410:CDS |
| TATGGGTTAATAAAAGACAG+TGG | 0.717190 | 7_4:-884761 | Msa1134410:three_prime_UTR |
| AGGCGTCACTAGCAACCCAG+CGG | 0.791833 | 7_4:-887721 | Msa1134410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | + | chr7_4:885445-885464 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr7_4:885446-885465 | None:intergenic | 0.0% |
| !!! | TTTTATTTTATTAAAATTTT+TGG | - | chr7_4:885693-885712 | Msa1134410:CDS | 0.0% |
| !!! | ATTAAATACTTTTAATTTTC+AGG | - | chr7_4:885646-885665 | Msa1134410:CDS | 10.0% |
| !! | ACAAATTATTTAAAAATTCA+GGG | + | chr7_4:888981-889000 | None:intergenic | 10.0% |
| !! | TACAAATTATTTAAAAATTC+AGG | + | chr7_4:888982-889001 | None:intergenic | 10.0% |
| !! | GATTAAAAAACAATTATTTA+AGG | - | chr7_4:889057-889076 | Msa1134410:intron | 10.0% |
| !! | TCTATATGACATTATTTAAT+TGG | + | chr7_4:885192-885211 | None:intergenic | 15.0% |
| !! | GTAAAAAAAAATTACACTAT+CGG | - | chr7_4:885614-885633 | Msa1134410:intron | 15.0% |
| !!! | AAATTTGAAAGAAAAACTTT+TGG | + | chr7_4:886943-886962 | None:intergenic | 15.0% |
| !! | TATAAAAAAAATAGAAATCG+AGG | + | chr7_4:887315-887334 | None:intergenic | 15.0% |
| !!! | TCGATTTCTATTTTTTTTAT+AGG | - | chr7_4:887314-887333 | Msa1134410:intron | 15.0% |
| !!! | ATTTCTATTTTTTTTATAGG+AGG | - | chr7_4:887317-887336 | Msa1134410:intron | 15.0% |
| !!! | TTTCTATTTTTTTTATAGGA+GGG | - | chr7_4:887318-887337 | Msa1134410:intron | 15.0% |
| !! | AAAATAGAACATTAAATTCA+CGG | + | chr7_4:887406-887425 | None:intergenic | 15.0% |
| !!! | TTATTATGTTGATTATATCA+AGG | + | chr7_4:887880-887899 | None:intergenic | 15.0% |
| !! | TGATATAATCAACATAATAA+TGG | - | chr7_4:887880-887899 | Msa1134410:intron | 15.0% |
| !! | GATATAATCAACATAATAAT+GGG | - | chr7_4:887881-887900 | Msa1134410:intron | 15.0% |
| !! | TATTAATAACTATAAGCAAA+TGG | + | chr7_4:888741-888760 | None:intergenic | 15.0% |
| !!! | GACAATTTTTTCAAAATTTA+CGG | - | chr7_4:889030-889049 | Msa1134410:intron | 15.0% |
| !! | AAAATGTTTAATTAATCTGA+AGG | + | chr7_4:889142-889161 | None:intergenic | 15.0% |
| !! | AAATCATTTGTATTGTTGAA+AGG | + | chr7_4:884812-884831 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTTATACACTGA+CGG | - | chr7_4:885074-885093 | Msa1134410:intron | 20.0% |
| !! | TAATGTCATATAGATATTTG+TGG | - | chr7_4:885198-885217 | Msa1134410:intron | 20.0% |
| !! | AGAGATTAATCTCTAAATAA+TGG | - | chr7_4:885311-885330 | Msa1134410:intron | 20.0% |
| !! | ATATATAAAGAGTTGCATTA+TGG | - | chr7_4:885569-885588 | Msa1134410:intron | 20.0% |
| !! | TCATATTCATTATAAACTTG+AGG | + | chr7_4:886354-886373 | None:intergenic | 20.0% |
| !!! | ATTTTTGAAACATTATTCCT+AGG | + | chr7_4:886728-886747 | None:intergenic | 20.0% |
| !! | AATGTTTCAAAAATCAATAC+TGG | - | chr7_4:886734-886753 | Msa1134410:CDS | 20.0% |
| !! | AAACTAAATATACTTTGTGA+AGG | + | chr7_4:887080-887099 | None:intergenic | 20.0% |
| !!! | AAAGTATATTTAGTTTAGCT+TGG | - | chr7_4:887084-887103 | Msa1134410:intron | 20.0% |
| !!! | TTCTATTTTTTTTATAGGAG+GGG | - | chr7_4:887319-887338 | Msa1134410:intron | 20.0% |
| !! | AAATAGAACATTAAATTCAC+GGG | + | chr7_4:887405-887424 | None:intergenic | 20.0% |
| !!! | AATGTTCTATTTTTAATTCG+TGG | - | chr7_4:887413-887432 | Msa1134410:intron | 20.0% |
| !! | ATAGATTTATGAACTATTTG+AGG | - | chr7_4:888820-888839 | Msa1134410:intron | 20.0% |
| !! | TAAAAAAAAAACCAAGTTCA+GGG | + | chr7_4:888920-888939 | None:intergenic | 20.0% |
| !! | TTAAAAAAAAAACCAAGTTC+AGG | + | chr7_4:888921-888940 | None:intergenic | 20.0% |
| !!! | CTTGTTAGTAATTTGTAATT+AGG | + | chr7_4:889084-889103 | None:intergenic | 20.0% |
| ! | TTGCTTATATTAATGACAAG+AGG | - | chr7_4:884530-884549 | Msa1134410:three_prime_UTR | 25.0% |
| ! | TGCTTATATTAATGACAAGA+GGG | - | chr7_4:884531-884550 | Msa1134410:three_prime_UTR | 25.0% |
| ! | TGTAACAATTCTCATTTCAA+TGG | - | chr7_4:884688-884707 | Msa1134410:three_prime_UTR | 25.0% |
| ! | ACAGTCATTGGATATTTAAT+TGG | + | chr7_4:885124-885143 | None:intergenic | 25.0% |
| ! | CAATTATTGTATACAGTCAT+TGG | + | chr7_4:885136-885155 | None:intergenic | 25.0% |
| ! | TAAGAACTAACATGTAAAAG+TGG | - | chr7_4:885229-885248 | Msa1134410:intron | 25.0% |
| !!! | CATGAAGTTTGTTTTTTCAT+TGG | - | chr7_4:885754-885773 | Msa1134410:CDS | 25.0% |
| !!! | ACAACTTAATTTGTAGCTTA+CGG | - | chr7_4:885791-885810 | Msa1134410:intron | 25.0% |
| ! | AAAATAAAGTCAAATTGCGT+AGG | - | chr7_4:885868-885887 | Msa1134410:intron | 25.0% |
| ! | GGCTTAACATTAAAGTTAAA+GGG | + | chr7_4:886039-886058 | None:intergenic | 25.0% |
| ! | AGGCTTAACATTAAAGTTAA+AGG | + | chr7_4:886040-886059 | None:intergenic | 25.0% |
| ! | TCAAATATACACCAAGTATA+TGG | + | chr7_4:886229-886248 | None:intergenic | 25.0% |
| !!! | TACTTGGTGTATATTTGAAT+TGG | - | chr7_4:886231-886250 | Msa1134410:intron | 25.0% |
| ! | ATTCATTATAAACTTGAGGT+TGG | + | chr7_4:886350-886369 | None:intergenic | 25.0% |
| ! | ATGATCTTTATGAGAAACAA+GGG | - | chr7_4:886501-886520 | Msa1134410:intron | 25.0% |
| ! | TAACATAAATTATTACCGCT+GGG | + | chr7_4:886613-886632 | None:intergenic | 25.0% |
| ! | ATAACATAAATTATTACCGC+TGG | + | chr7_4:886614-886633 | None:intergenic | 25.0% |
| ! | GTAATAATGAAAGACTTGAA+TGG | - | chr7_4:886660-886679 | Msa1134410:CDS | 25.0% |
| !!! | TTACAACTCTTAAAAGTGTT+TGG | + | chr7_4:886777-886796 | None:intergenic | 25.0% |
| ! | TGGTATTAGTATATGATTGA+TGG | + | chr7_4:886923-886942 | None:intergenic | 25.0% |
| ! | TAAAATTACATGATCATGCA+GGG | - | chr7_4:887443-887462 | Msa1134410:CDS | 25.0% |
| ! | TCAATTTATGATCAAACTGA+TGG | - | chr7_4:887552-887571 | Msa1134410:intron | 25.0% |
| ! | GAATCTTAATATACACATTG+GGG | + | chr7_4:887677-887696 | None:intergenic | 25.0% |
| ! | GGAATCTTAATATACACATT+GGG | + | chr7_4:887678-887697 | None:intergenic | 25.0% |
| ! | TGGAATCTTAATATACACAT+TGG | + | chr7_4:887679-887698 | None:intergenic | 25.0% |
| ! | TATGTTAACATGCTATAAGT+TGG | - | chr7_4:887824-887843 | Msa1134410:CDS | 25.0% |
| ! | ATGTTAACATGCTATAAGTT+GGG | - | chr7_4:887825-887844 | Msa1134410:CDS | 25.0% |
| !!! | TCACTTTTCCAAATTATTAC+CGG | + | chr7_4:888000-888019 | None:intergenic | 25.0% |
| ! | CTTCTAAATGAAGATGTATT+TGG | + | chr7_4:888083-888102 | None:intergenic | 25.0% |
| !! | GTCATGACATTGAATTTTAT+AGG | - | chr7_4:888507-888526 | Msa1134410:intron | 25.0% |
| !! | AAAATTTCTTTTGGTATAGC+TGG | + | chr7_4:888561-888580 | None:intergenic | 25.0% |
| !! | CTATACCAAAAGAAATTTTC+TGG | - | chr7_4:888562-888581 | Msa1134410:intron | 25.0% |
| ! | GGATTATTGAAAAAATGTGA+TGG | + | chr7_4:888720-888739 | None:intergenic | 25.0% |
| ! | AATCTGAAGAAAATACTACT+TGG | + | chr7_4:888790-888809 | None:intergenic | 25.0% |
| !! | CTATTTGAGGATTTTCAAAA+AGG | - | chr7_4:888833-888852 | Msa1134410:intron | 25.0% |
| !!! | TACAAATTCTTTTAGTTCAG+AGG | + | chr7_4:888859-888878 | None:intergenic | 25.0% |
| ! | TACAAATTACTAACAAGTTC+AGG | - | chr7_4:889087-889106 | Msa1134410:intron | 25.0% |
| ! | ACAAATTACTAACAAGTTCA+GGG | - | chr7_4:889088-889107 | Msa1134410:intron | 25.0% |
| ! | CTTGATTATGTTAACAAACT+TGG | - | chr7_4:889184-889203 | Msa1134410:intron | 25.0% |
| !!! | TACTATGTATGCTGTTTTTT+AGG | - | chr7_4:889705-889724 | Msa1134410:five_prime_UTR | 25.0% |
| !!! | ACTATGTATGCTGTTTTTTA+GGG | - | chr7_4:889706-889725 | Msa1134410:five_prime_UTR | 25.0% |
| ! | ACATAAAATGACATCAGATT+TGG | + | chr7_4:889902-889921 | None:intergenic | 25.0% |
| AGTTTAAGTAGTACACCTTT+CGG | - | chr7_4:884397-884416 | Msa1134410:three_prime_UTR | 30.0% | |
| !!! | TTCATGCTTATTTTTGCATG+CGG | - | chr7_4:884930-884949 | Msa1134410:CDS | 30.0% |
| GATTAATTTCTATCCACTGA+CGG | - | chr7_4:885360-885379 | Msa1134410:intron | 30.0% | |
| AAAAATATTTACACCGTCAG+TGG | + | chr7_4:885376-885395 | None:intergenic | 30.0% | |
| ACTCTCTACAATCATCTATT+TGG | + | chr7_4:885426-885445 | None:intergenic | 30.0% | |
| GCATTATGGAATGATTTGAT+TGG | - | chr7_4:885583-885602 | Msa1134410:intron | 30.0% | |
| !!! | GTTTTTTCATTGGTTCTGTT+TGG | - | chr7_4:885764-885783 | Msa1134410:CDS | 30.0% |
| TAGGCTTATTTACTGACAAA+AGG | + | chr7_4:886007-886026 | None:intergenic | 30.0% | |
| ATTAAAGTTAAAGGGCTGTT+TGG | + | chr7_4:886031-886050 | None:intergenic | 30.0% | |
| CTGTCAGAATAATACTTAGT+GGG | - | chr7_4:886058-886077 | Msa1134410:CDS | 30.0% | |
| ACAGTATAACACCATGATTT+CGG | + | chr7_4:886184-886203 | None:intergenic | 30.0% | |
| ATATACACCAAGTATATGGT+TGG | + | chr7_4:886225-886244 | None:intergenic | 30.0% | |
| TTGGTGTATATTTGAATTGG+TGG | - | chr7_4:886234-886253 | Msa1134410:intron | 30.0% | |
| ! | TGTTGCTATTGTCAAAATCA+TGG | - | chr7_4:886306-886325 | Msa1134410:intron | 30.0% |
| ! | CCTCAATATAAATGTCGATT+AGG | + | chr7_4:886392-886411 | None:intergenic | 30.0% |
| CCTAATCGACATTTATATTG+AGG | - | chr7_4:886389-886408 | Msa1134410:intron | 30.0% | |
| CATGATCTTTATGAGAAACA+AGG | - | chr7_4:886500-886519 | Msa1134410:intron | 30.0% | |
| ! | CGAAGATATTTTTCTATCCT+AGG | - | chr7_4:886708-886727 | Msa1134410:CDS | 30.0% |
| TGTTGTCAAATTGTAGATGT+AGG | + | chr7_4:887188-887207 | None:intergenic | 30.0% | |
| AACACGCAACATTATACTTA+AGG | + | chr7_4:887358-887377 | None:intergenic | 30.0% | |
| !!! | TCTATTTTTAATTCGTGGTG+TGG | - | chr7_4:887418-887437 | Msa1134410:intron | 30.0% |
| CTAAAATTACATGATCATGC+AGG | - | chr7_4:887442-887461 | Msa1134410:CDS | 30.0% | |
| ATTTATGATCAAACTGATGG+AGG | - | chr7_4:887555-887574 | Msa1134410:intron | 30.0% | |
| CGATAACTTCCTTAATTGAA+GGG | + | chr7_4:887719-887738 | None:intergenic | 30.0% | |
| ! | TGTTGATTATATCAAGGACA+AGG | + | chr7_4:887874-887893 | None:intergenic | 30.0% |
| ACAAACGTATATTTAGACTC+CGG | + | chr7_4:888209-888228 | None:intergenic | 30.0% | |
| TACAGCTTCATATCTTTCAA+GGG | + | chr7_4:888251-888270 | None:intergenic | 30.0% | |
| TTACAGCTTCATATCTTTCA+AGG | + | chr7_4:888252-888271 | None:intergenic | 30.0% | |
| ! | TTATTGCCAATTTTTGCGTT+TGG | - | chr7_4:888447-888466 | Msa1134410:intron | 30.0% |
| TCAAATCCAAACGCAAAAAT+TGG | + | chr7_4:888456-888475 | None:intergenic | 30.0% | |
| AATAAGAGGAGCAACATATA+AGG | + | chr7_4:888680-888699 | None:intergenic | 30.0% | |
| TTATATGTTGCTCCTCTTAT+TGG | - | chr7_4:888679-888698 | Msa1134410:intron | 30.0% | |
| TGAAAAAATGTGATGGCTTA+CGG | + | chr7_4:888713-888732 | None:intergenic | 30.0% | |
| GAACATTTCTGACAATTTCA+GGG | + | chr7_4:888889-888908 | None:intergenic | 30.0% | |
| TGAACATTTCTGACAATTTC+AGG | + | chr7_4:888890-888909 | None:intergenic | 30.0% | |
| TCTTTAATGAACATCTCGTT+AGG | - | chr7_4:889161-889180 | Msa1134410:intron | 30.0% | |
| ! | TATGGGTTAATAAAAGACAG+TGG | - | chr7_4:889555-889574 | Msa1134410:CDS | 30.0% |
| TAATAAAAGACAGTGGCTAA+TGG | - | chr7_4:889562-889581 | Msa1134410:CDS | 30.0% | |
| AATAAAAGACAGTGGCTAAT+GGG | - | chr7_4:889563-889582 | Msa1134410:CDS | 30.0% | |
| CACAGATGATTTATCATTCT+AGG | + | chr7_4:889618-889637 | None:intergenic | 30.0% | |
| GATAGTGATACATTGTTAGT+TGG | - | chr7_4:889637-889656 | Msa1134410:five_prime_UTR | 30.0% | |
| CATTGTTAGTTGGAAATTCT+TGG | - | chr7_4:889647-889666 | Msa1134410:five_prime_UTR | 30.0% | |
| AAAACAGCATACATAGTACA+TGG | + | chr7_4:889703-889722 | None:intergenic | 30.0% | |
| ! | AGTCGAGATTTAAAATTGCA+CGG | + | chr7_4:889757-889776 | None:intergenic | 30.0% |
| TGCTTATATTAGTGACCGAA+AGG | + | chr7_4:884415-884434 | None:intergenic | 35.0% | |
| !! | TGGTGTTGTGATCTTAGAAA+CGG | + | chr7_4:884726-884745 | None:intergenic | 35.0% |
| TTCTTAAAGAAGAAGCAGAG+AGG | + | chr7_4:884844-884863 | None:intergenic | 35.0% | |
| ACCTCAAAGACGTTACAAAA+CGG | + | chr7_4:884880-884899 | None:intergenic | 35.0% | |
| !!! | CGATGTGTTTTGTTGTTGTA+AGG | - | chr7_4:885037-885056 | Msa1134410:CDS | 35.0% |
| ! | GTTGTAAGGATGTGTTTTGT+TGG | - | chr7_4:885051-885070 | Msa1134410:CDS | 35.0% |
| !! | GCTGTTTTCATAAGCTAAGT+TGG | - | chr7_4:885896-885915 | Msa1134410:intron | 35.0% |
| CCACTAAGTATTATTCTGAC+AGG | + | chr7_4:886060-886079 | None:intergenic | 35.0% | |
| CCTGTCAGAATAATACTTAG+TGG | - | chr7_4:886057-886076 | Msa1134410:CDS | 35.0% | |
| TCAGAATAATACTTAGTGGG+CGG | - | chr7_4:886061-886080 | Msa1134410:CDS | 35.0% | |
| TGGTGAGTTATGCAAAATCA+CGG | - | chr7_4:886254-886273 | Msa1134410:intron | 35.0% | |
| GTCGATTAGGAAACAAAACA+AGG | + | chr7_4:886379-886398 | None:intergenic | 35.0% | |
| ATTAGATGCTCACAAACAGA+TGG | - | chr7_4:886446-886465 | Msa1134410:intron | 35.0% | |
| CTGATTCCTCTTATTGAAAG+TGG | - | chr7_4:886566-886585 | Msa1134410:intron | 35.0% | |
| CTAACACCACTTTCAATAAG+AGG | + | chr7_4:886575-886594 | None:intergenic | 35.0% | |
| ! | CTTATTGAAAGTGGTGTTAG+AGG | - | chr7_4:886575-886594 | Msa1134410:CDS | 35.0% |
| ATATCTTCGCACAAGTAGAA+CGG | + | chr7_4:886697-886716 | None:intergenic | 35.0% | |
| GTGCTTACAATGATCAATTC+AGG | - | chr7_4:886895-886914 | Msa1134410:intron | 35.0% | |
| ATTAGAAGTAGAGTAAACCG+TGG | - | chr7_4:886976-886995 | Msa1134410:intron | 35.0% | |
| GAGTAATACAACGATTATGC+AGG | + | chr7_4:887042-887061 | None:intergenic | 35.0% | |
| TAGCTTGGTAAACTACACAA+AGG | - | chr7_4:887099-887118 | Msa1134410:intron | 35.0% | |
| ! | TTTCTGTTGAAGTATCTCCT+AGG | - | chr7_4:887589-887608 | Msa1134410:intron | 35.0% |
| TGCAAAATGGCTTCATAAAG+TGG | - | chr7_4:887644-887663 | Msa1134410:intron | 35.0% | |
| GCGATAACTTCCTTAATTGA+AGG | + | chr7_4:887720-887739 | None:intergenic | 35.0% | |
| ATTAAGGAAGTTATCGCCAA+TGG | - | chr7_4:887723-887742 | Msa1134410:CDS | 35.0% | |
| !! | CATAATAATGGGTAGTAGCA+AGG | - | chr7_4:887892-887911 | Msa1134410:intron | 35.0% |
| TGATATTGACATGTTGACAC+CGG | - | chr7_4:887978-887997 | Msa1134410:intron | 35.0% | |
| TGTTGACACCGGTAATAATT+TGG | - | chr7_4:887989-888008 | Msa1134410:intron | 35.0% | |
| TTGAATGTAACCTCATGTGT+TGG | - | chr7_4:888020-888039 | Msa1134410:intron | 35.0% | |
| ! | ATTTGGTGAATGACATGTGT+CGG | + | chr7_4:888066-888085 | None:intergenic | 35.0% |
| !! | GATTACTTTTACCATGTTGC+CGG | - | chr7_4:888187-888206 | Msa1134410:intron | 35.0% |
| GGAGTCTAAATATACGTTTG+TGG | - | chr7_4:888208-888227 | Msa1134410:intron | 35.0% | |
| AGCTGTAATTGATGCTTACT+TGG | - | chr7_4:888264-888283 | Msa1134410:intron | 35.0% | |
| GTAATTGATGCTTACTTGGA+CGG | - | chr7_4:888268-888287 | Msa1134410:intron | 35.0% | |
| GACAAGATGCTTGAGAAAAT+TGG | - | chr7_4:888373-888392 | Msa1134410:intron | 35.0% | |
| ! | TTGGGCCAGAAAATTTCTTT+TGG | + | chr7_4:888570-888589 | None:intergenic | 35.0% |
| !! | AAAAGAAATTTTCTGGCCCA+AGG | - | chr7_4:888569-888588 | Msa1134410:intron | 35.0% |
| ! | TGGGAAGCTCTAGTTAAAAA+AGG | - | chr7_4:888592-888611 | Msa1134410:intron | 35.0% |
| ! | GGGAAGCTCTAGTTAAAAAA+GGG | - | chr7_4:888593-888612 | Msa1134410:intron | 35.0% |
| ! | GGAAGCTCTAGTTAAAAAAG+GGG | - | chr7_4:888594-888613 | Msa1134410:intron | 35.0% |
| ! | AACATATAAGGTGTCAGGAT+AGG | + | chr7_4:888668-888687 | None:intergenic | 35.0% |
| TTCATTTAGATCCCTGAACT+TGG | - | chr7_4:888906-888925 | Msa1134410:intron | 35.0% | |
| TATTTGGGTCCTTAAAGTCA+GGG | - | chr7_4:889000-889019 | Msa1134410:intron | 35.0% | |
| GTAATGTTAGTTCAGGGATT+AGG | + | chr7_4:889222-889241 | None:intergenic | 35.0% | |
| GAGAAGGTAATGTTAGTTCA+GGG | + | chr7_4:889228-889247 | None:intergenic | 35.0% | |
| TGAGAAGGTAATGTTAGTTC+AGG | + | chr7_4:889229-889248 | None:intergenic | 35.0% | |
| CTTCAAGCATTTATCGATCA+CGG | - | chr7_4:889285-889304 | Msa1134410:intron | 35.0% | |
| ATACAATGCTATCCAGAAGT+TGG | - | chr7_4:889356-889375 | Msa1134410:intron | 35.0% | |
| TACAATGCTATCCAGAAGTT+GGG | - | chr7_4:889357-889376 | Msa1134410:intron | 35.0% | |
| ! | GTCTTTTATTAACCCATACG+CGG | + | chr7_4:889553-889572 | None:intergenic | 35.0% |
| ATAAAAGACAGTGGCTAATG+GGG | - | chr7_4:889564-889583 | Msa1134410:CDS | 35.0% | |
| CTGATCTAAATCAATAGCAG+AGG | - | chr7_4:889779-889798 | Msa1134410:five_prime_UTR | 35.0% | |
| ! | AGGTAAGAAGCTCGTTTTGA+TGG | + | chr7_4:884792-884811 | None:intergenic | 40.0% |
| ! | ACCGTTTTGTAACGTCTTTG+AGG | - | chr7_4:884876-884895 | Msa1134410:CDS | 40.0% |
| TTTGTAGCTTACGGCATAAG+TGG | - | chr7_4:885800-885819 | Msa1134410:intron | 40.0% | |
| AGTTAAAGGGCTGTTTGGAT+AGG | + | chr7_4:886026-886045 | None:intergenic | 40.0% | |
| ACGGAGTTTGACAAAGTTAC+AGG | - | chr7_4:886113-886132 | Msa1134410:intron | 40.0% | |
| CGGAGTTTGACAAAGTTACA+GGG | - | chr7_4:886114-886133 | Msa1134410:intron | 40.0% | |
| GGAGTTTGACAAAGTTACAG+GGG | - | chr7_4:886115-886134 | Msa1134410:intron | 40.0% | |
| TTTCGGCAAAAGCTGCAATT+TGG | + | chr7_4:886167-886186 | None:intergenic | 40.0% | |
| ! | CAAGTATATGGTTGGATTGG+TGG | + | chr7_4:886217-886236 | None:intergenic | 40.0% |
| CACCAATCCAACCATATACT+TGG | - | chr7_4:886215-886234 | Msa1134410:intron | 40.0% | |
| CACCAAGTATATGGTTGGAT+TGG | + | chr7_4:886220-886239 | None:intergenic | 40.0% | |
| TGAGTTATGCAAAATCACGG+TGG | - | chr7_4:886257-886276 | Msa1134410:intron | 40.0% | |
| TGAGGCAAACATTTGACTGT+TGG | - | chr7_4:886407-886426 | Msa1134410:intron | 40.0% | |
| GCAAACATTTGACTGTTGGT+TGG | - | chr7_4:886411-886430 | Msa1134410:intron | 40.0% | |
| TGCTCACAAACAGATGGAAA+TGG | - | chr7_4:886452-886471 | Msa1134410:intron | 40.0% | |
| AAGAGGAATCAGATCCGTAA+CGG | + | chr7_4:886558-886577 | None:intergenic | 40.0% | |
| CTGCAATCATGTGGTATAGA+CGG | + | chr7_4:886847-886866 | None:intergenic | 40.0% | |
| CTGAAAGATCTGCAATCATG+TGG | + | chr7_4:886856-886875 | None:intergenic | 40.0% | |
| AAGGTCAATGTTGTCAATCC+CGG | - | chr7_4:887118-887137 | Msa1134410:intron | 40.0% | |
| AATCGCAATTCTCTGTGATC+CGG | + | chr7_4:887140-887159 | None:intergenic | 40.0% | |
| GTGTACTAAATCGTGTATCG+CGG | - | chr7_4:887210-887229 | Msa1134410:intron | 40.0% | |
| TCTCCAAACTCTCTATGCTA+TGG | - | chr7_4:887246-887265 | Msa1134410:intron | 40.0% | |
| AAGACATTGACAGTGCATAC+TGG | - | chr7_4:887484-887503 | Msa1134410:intron | 40.0% | |
| AGACATTGACAGTGCATACT+GGG | - | chr7_4:887485-887504 | Msa1134410:intron | 40.0% | |
| ATACTGGGAACTTGTAGTGA+AGG | - | chr7_4:887500-887519 | Msa1134410:intron | 40.0% | |
| GAACCATAGAAGCTGCAAAA+TGG | - | chr7_4:887631-887650 | Msa1134410:intron | 40.0% | |
| !! | AAGCCATTTTGCAGCTTCTA+TGG | + | chr7_4:887637-887656 | None:intergenic | 40.0% |
| TGCATGTGTCCCTTCAATTA+AGG | - | chr7_4:887707-887726 | Msa1134410:intron | 40.0% | |
| CACGTTCACACTTATTCCAT+TGG | + | chr7_4:887742-887761 | None:intergenic | 40.0% | |
| ! | GTTATGCTGGTTAGAAGTGA+GGG | - | chr7_4:887914-887933 | Msa1134410:intron | 40.0% |
| GTCAATATCAGTGATGTGTC+TGG | + | chr7_4:887968-887987 | None:intergenic | 40.0% | |
| ATATTTAGACTCCGGCAACA+TGG | + | chr7_4:888201-888220 | None:intergenic | 40.0% | |
| GTATTTGGGTCCTTAAAGTC+AGG | - | chr7_4:888999-889018 | Msa1134410:intron | 40.0% | |
| TCATCAAGTCCCTGACTTTA+AGG | + | chr7_4:889012-889031 | None:intergenic | 40.0% | |
| TACCTTCTCATTTACTTCCC+AGG | - | chr7_4:889239-889258 | Msa1134410:intron | 40.0% | |
| TACCTGGGAAGTAAATGAGA+AGG | + | chr7_4:889244-889263 | None:intergenic | 40.0% | |
| ! | CGATAAATGCTTGAAGTGCT+TGG | + | chr7_4:889281-889300 | None:intergenic | 40.0% |
| TGCATTTGAGTCTATTGTCC+TGG | + | chr7_4:889319-889338 | None:intergenic | 40.0% | |
| ! | TCAAATGCATCTGAAGCTGA+AGG | - | chr7_4:889330-889349 | Msa1134410:intron | 40.0% |
| !! | TCCAGAAGTTGGGTATTGAT+TGG | - | chr7_4:889367-889386 | Msa1134410:intron | 40.0% |
| TCCAATCAATACCCAACTTC+TGG | + | chr7_4:889371-889390 | None:intergenic | 40.0% | |
| GAAGGCAAAATCTCTTAAGC+TGG | - | chr7_4:889473-889492 | Msa1134410:CDS | 40.0% | |
| CAAGTGAGGTGTGAACTTTA+TGG | - | chr7_4:889500-889519 | Msa1134410:CDS | 40.0% | |
| TAATGTATGATGCCGCGTAT+GGG | - | chr7_4:889538-889557 | Msa1134410:CDS | 40.0% | |
| TACAACTATCTCGTTCACGC+TGG | + | chr7_4:884672-884691 | None:intergenic | 45.0% | |
| ! | AAAGAAGCGCGGTTTGTGTT+TGG | + | chr7_4:884746-884765 | None:intergenic | 45.0% |
| GAGATTCTGGTAAAGAAGCG+CGG | + | chr7_4:884757-884776 | None:intergenic | 45.0% | |
| GATCTGGATCGAAGAGATTC+TGG | + | chr7_4:884770-884789 | None:intergenic | 45.0% | |
| !! | GAAGCTCGTTTTGATGGATC+TGG | + | chr7_4:884786-884805 | None:intergenic | 45.0% |
| GCTAATACAAACCGACTGCA+AGG | + | chr7_4:886093-886112 | None:intergenic | 45.0% | |
| !! | GCAGTCGGTTTGTATTAGCA+CGG | - | chr7_4:886094-886113 | Msa1134410:intron | 45.0% |
| ! | TGCAGCTTTTGCCGAAATCA+TGG | - | chr7_4:886170-886189 | Msa1134410:intron | 45.0% |
| ACTTGAGGTTGGCAGAATCA+TGG | + | chr7_4:886339-886358 | None:intergenic | 45.0% | |
| TGTGAGCATCTAATCCTGCA+AGG | + | chr7_4:886440-886459 | None:intergenic | 45.0% | |
| GAAATGGAGTTCCTGCAAAG+AGG | - | chr7_4:886468-886487 | Msa1134410:intron | 45.0% | |
| CGGCAGAGATTATCATACCA+TGG | + | chr7_4:886533-886552 | None:intergenic | 45.0% | |
| AGAGGAATCAGATCCGTAAC+GGG | + | chr7_4:886557-886576 | None:intergenic | 45.0% | |
| AGAAGTAGAGTAAACCGTGG+AGG | - | chr7_4:886979-886998 | Msa1134410:intron | 45.0% | |
| ATCGCAATTCTCTGTGATCC+GGG | + | chr7_4:887139-887158 | None:intergenic | 45.0% | |
| GATCAAACTGATGGAGGTGA+TGG | - | chr7_4:887561-887580 | Msa1134410:intron | 45.0% | |
| ! | GGTTATGCTGGTTAGAAGTG+AGG | - | chr7_4:887913-887932 | Msa1134410:intron | 45.0% |
| ! | CAACACTTGTGACTCTAGAG+AGG | + | chr7_4:888318-888337 | None:intergenic | 45.0% |
| !! | AGAAATTTTCTGGCCCAAGG+TGG | - | chr7_4:888572-888591 | Msa1134410:intron | 45.0% |
| !! | GAAATTTTCTGGCCCAAGGT+GGG | - | chr7_4:888573-888592 | Msa1134410:intron | 45.0% |
| TAACTAGAGCTTCCCACCTT+GGG | + | chr7_4:888588-888607 | None:intergenic | 45.0% | |
| TTAACTAGAGCTTCCCACCT+TGG | + | chr7_4:888589-888608 | None:intergenic | 45.0% | |
| AAAAAGGGGCCAAGAAGCAA+AGG | - | chr7_4:888608-888627 | Msa1134410:intron | 45.0% | |
| ATAGGCAGGATTCTTAACGC+TGG | + | chr7_4:888650-888669 | None:intergenic | 45.0% | |
| ! | TATAAGGTGTCAGGATAGGC+AGG | + | chr7_4:888664-888683 | None:intergenic | 45.0% |
| ! | GGAGCAACATATAAGGTGTC+AGG | + | chr7_4:888673-888692 | None:intergenic | 45.0% |
| AATGTGATGGCTTACGGTGT+CGG | + | chr7_4:888707-888726 | None:intergenic | 45.0% | |
| ! | AATGCTTGAAGTGCTTGGTC+TGG | + | chr7_4:889276-889295 | None:intergenic | 45.0% |
| TGAGTCTATTGTCCTGGCTA+CGG | + | chr7_4:889313-889332 | None:intergenic | 45.0% | |
| GGTTCACAGCTTGAATTGGA+AGG | - | chr7_4:889399-889418 | Msa1134410:intron | 45.0% | |
| GTAATGTATGATGCCGCGTA+TGG | - | chr7_4:889537-889556 | Msa1134410:CDS | 45.0% | |
| TGCACGGTGCAATTATTGCA+GGG | + | chr7_4:889741-889760 | None:intergenic | 45.0% | |
| TTGCACGGTGCAATTATTGC+AGG | + | chr7_4:889742-889761 | None:intergenic | 45.0% | |
| !! | TTATTAATAATAAGTTATTA+TGG | - | chr7_4:888752-888771 | Msa1134410:intron | 5.0% |
| !!! | ATTTTTAAATAATTTGTATT+TGG | - | chr7_4:888984-889003 | Msa1134410:intron | 5.0% |
| !!! | TTTTTAAATAATTTGTATTT+GGG | - | chr7_4:888985-889004 | Msa1134410:intron | 5.0% |
| !!! | TTAAATAATTGTTTTTTAAT+CGG | + | chr7_4:889058-889077 | None:intergenic | 5.0% |
| !! | ATTAAAAAACAATTATTTAA+GGG | - | chr7_4:889058-889077 | Msa1134410:intron | 5.0% |
| TGGAGTTCCTGCAAAGAGGA+CGG | - | chr7_4:886472-886491 | Msa1134410:intron | 50.0% | |
| TGAAGAACCGTCCTCTTTGC+AGG | + | chr7_4:886482-886501 | None:intergenic | 50.0% | |
| AGAAACAAGGGCAGAGTCCA+TGG | - | chr7_4:886513-886532 | Msa1134410:intron | 50.0% | |
| TAATCTCTGCCGACCCGTTA+CGG | - | chr7_4:886541-886560 | Msa1134410:intron | 50.0% | |
| !! | GAATCAGATCCGTAACGGGT+CGG | + | chr7_4:886553-886572 | None:intergenic | 50.0% |
| GAGACATGTCTATGCCTCCA+CGG | + | chr7_4:886996-887015 | None:intergenic | 50.0% | |
| GCGCCATAGCATAGAGAGTT+TGG | + | chr7_4:887252-887271 | None:intergenic | 50.0% | |
| TGGCGCGATAGAGATGCTAT+TGG | - | chr7_4:887266-887285 | Msa1134410:intron | 50.0% | |
| !! | AGTATCTCCTAGGCTTGCTG+AGG | - | chr7_4:887599-887618 | Msa1134410:intron | 50.0% |
| TCAGTATCCTCAGCAAGCCT+AGG | + | chr7_4:887609-887628 | None:intergenic | 50.0% | |
| !! | AGGCTTGCTGAGGATACTGA+AGG | - | chr7_4:887609-887628 | Msa1134410:intron | 50.0% |
| GGGTAGTAGCAAGGTTATGC+TGG | - | chr7_4:887901-887920 | Msa1134410:intron | 50.0% | |
| TGATGCTTACTTGGACGGTC+TGG | - | chr7_4:888273-888292 | Msa1134410:intron | 50.0% | |
| CACTCGACTGACAAAGAACG+AGG | + | chr7_4:888341-888360 | None:intergenic | 50.0% | |
| CTCGTTCTTTGTCAGTCGAG+TGG | - | chr7_4:888339-888358 | Msa1134410:intron | 50.0% | |
| TACCTTGCCGCGTAGATCAA+GGG | + | chr7_4:888410-888429 | None:intergenic | 50.0% | |
| TTACCTTGCCGCGTAGATCA+AGG | + | chr7_4:888411-888430 | None:intergenic | 50.0% | |
| CAAGAAGCAAAGGCTCCTGT+GGG | - | chr7_4:888618-888637 | Msa1134410:intron | 50.0% | |
| ATGTGATGGCTTACGGTGTC+GGG | + | chr7_4:888706-888725 | None:intergenic | 50.0% | |
| GTCTGGCATGGTAGATACCT+GGG | + | chr7_4:889259-889278 | None:intergenic | 50.0% | |
| ! | TTGAAGTGCTTGGTCTGGCA+TGG | + | chr7_4:889271-889290 | None:intergenic | 50.0% |
| TGAATCCAGGAGGCTGTCAA+AGG | + | chr7_4:889445-889464 | None:intergenic | 50.0% | |
| CTTAAGCTGGTCAGCAAGTG+AGG | - | chr7_4:889486-889505 | Msa1134410:CDS | 50.0% | |
| GGCGGTATTTGCCTTGCAGT+CGG | - | chr7_4:886079-886098 | Msa1134410:CDS | 55.0% | |
| ! | CTGTTGGTTGGTGTCCTTGC+AGG | - | chr7_4:886423-886442 | Msa1134410:intron | 55.0% |
| TGCAGGGAACTTGTGCAAGC+AGG | - | chr7_4:887459-887478 | Msa1134410:intron | 55.0% | |
| GCAGGGAACTTGTGCAAGCA+GGG | - | chr7_4:887460-887479 | Msa1134410:intron | 55.0% | |
| TGCTTACTTGGACGGTCTGG+AGG | - | chr7_4:888276-888295 | Msa1134410:intron | 55.0% | |
| GCGTAGATCAAGGGCTTCTG+GGG | + | chr7_4:888401-888420 | None:intergenic | 55.0% | |
| CGCGTAGATCAAGGGCTTCT+GGG | + | chr7_4:888402-888421 | None:intergenic | 55.0% | |
| CCAGAAGCCCTTGATCTACG+CGG | - | chr7_4:888400-888419 | Msa1134410:intron | 55.0% | |
| !! | CTGGTAAGCCAGTGCTGCTT+GGG | + | chr7_4:888542-888561 | None:intergenic | 55.0% |
| CCACAGGAGCCTTTGCTTCT+TGG | + | chr7_4:888620-888639 | None:intergenic | 55.0% | |
| CCAAGAAGCAAAGGCTCCTG+TGG | - | chr7_4:888617-888636 | Msa1134410:intron | 55.0% | |
| ! | TAACGCTGGTTGAAGCCCAC+AGG | + | chr7_4:888636-888655 | None:intergenic | 55.0% |
| ! | ACGGTGTCGGGTCCAATAAG+AGG | + | chr7_4:888694-888713 | None:intergenic | 55.0% |
| GGTCTGGCATGGTAGATACC+TGG | + | chr7_4:889260-889279 | None:intergenic | 55.0% | |
| GAAAGCCTTTGACAGCCTCC+TGG | - | chr7_4:889437-889456 | Msa1134410:intron | 55.0% | |
| TCTCCTGCAGTGAATCCAGG+AGG | + | chr7_4:889455-889474 | None:intergenic | 55.0% | |
| CCTTCTCCTGCAGTGAATCC+AGG | + | chr7_4:889458-889477 | None:intergenic | 55.0% | |
| CCTGGATTCACTGCAGGAGA+AGG | - | chr7_4:889455-889474 | Msa1134410:CDS | 55.0% | |
| AGGCGTCACTAGCAACCCAG+CGG | - | chr7_4:886595-886614 | Msa1134410:CDS | 60.0% | |
| GGGACACATGCAGCTGTAGC+TGG | + | chr7_4:887699-887718 | None:intergenic | 60.0% | |
| CGACGCGACACCAACACATG+AGG | + | chr7_4:888033-888052 | None:intergenic | 60.0% | |
| !! | TTGGACGGTCTGGAGGCATC+TGG | - | chr7_4:888283-888302 | Msa1134410:intron | 60.0% |
| !! | TGGACGGTCTGGAGGCATCT+GGG | - | chr7_4:888284-888303 | Msa1134410:intron | 60.0% |
| CCGCGTAGATCAAGGGCTTC+TGG | + | chr7_4:888403-888422 | None:intergenic | 60.0% | |
| AGCCCTTGATCTACGCGGCA+AGG | - | chr7_4:888405-888424 | Msa1134410:intron | 60.0% | |
| AGCAGTAGCCCAAGCAGCAC+TGG | - | chr7_4:888531-888550 | Msa1134410:intron | 60.0% | |
| ! | GCTGGTAAGCCAGTGCTGCT+TGG | + | chr7_4:888543-888562 | None:intergenic | 60.0% |
| CAGCCTCCTGGATTCACTGC+AGG | - | chr7_4:889449-889468 | Msa1134410:CDS | 60.0% | |
| !! | TCGATCACGGTGCCGTAGCC+AGG | - | chr7_4:889298-889317 | Msa1134410:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 884397 | 889941 | 884397 | ID=Msa1134410;Name=Msa1134410 |
| chr7_4 | mRNA | 884397 | 889941 | 884397 | ID=Msa1134410-mRNA-1;Parent=Msa1134410;Name=Msa1134410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=310|1|1|1|0.85|0.75|8|407|443 |
| chr7_4 | exon | 884397 | 884466 | 884397 | ID=Msa1134410-mRNA-1:exon:351;Parent=Msa1134410-mRNA-1 |
| chr7_4 | exon | 884495 | 885077 | 884495 | ID=Msa1134410-mRNA-1:exon:350;Parent=Msa1134410-mRNA-1 |
| chr7_4 | exon | 885627 | 885809 | 885627 | ID=Msa1134410-mRNA-1:exon:349;Parent=Msa1134410-mRNA-1 |
| chr7_4 | exon | 885912 | 886100 | 885912 | ID=Msa1134410-mRNA-1:exon:348;Parent=Msa1134410-mRNA-1 |
| chr7_4 | exon | 886574 | 886874 | 886574 | ID=Msa1134410-mRNA-1:exon:347;Parent=Msa1134410-mRNA-1 |
| chr7_4 | exon | 887422 | 887471 | 887422 | ID=Msa1134410-mRNA-1:exon:346;Parent=Msa1134410-mRNA-1 |
| chr7_4 | exon | 887722 | 887893 | 887722 | ID=Msa1134410-mRNA-1:exon:345;Parent=Msa1134410-mRNA-1 |
| chr7_4 | exon | 889441 | 889941 | 889441 | ID=Msa1134410-mRNA-1:exon:344;Parent=Msa1134410-mRNA-1 |
| chr7_4 | five_prime_UTR | 889632 | 889941 | 889632 | ID=Msa1134410-mRNA-1:five_prime_utr;Parent=Msa1134410-mRNA-1 |
| chr7_4 | CDS | 889441 | 889631 | 889441 | ID=Msa1134410-mRNA-1:cds;Parent=Msa1134410-mRNA-1 |
| chr7_4 | CDS | 887722 | 887893 | 887722 | ID=Msa1134410-mRNA-1:cds;Parent=Msa1134410-mRNA-1 |
| chr7_4 | CDS | 887422 | 887471 | 887422 | ID=Msa1134410-mRNA-1:cds;Parent=Msa1134410-mRNA-1 |
| chr7_4 | CDS | 886574 | 886874 | 886574 | ID=Msa1134410-mRNA-1:cds;Parent=Msa1134410-mRNA-1 |
| chr7_4 | CDS | 885912 | 886100 | 885912 | ID=Msa1134410-mRNA-1:cds;Parent=Msa1134410-mRNA-1 |
| chr7_4 | CDS | 885627 | 885809 | 885627 | ID=Msa1134410-mRNA-1:cds;Parent=Msa1134410-mRNA-1 |
| chr7_4 | CDS | 884832 | 885077 | 884832 | ID=Msa1134410-mRNA-1:cds;Parent=Msa1134410-mRNA-1 |
| chr7_4 | three_prime_UTR | 884495 | 884831 | 884495 | ID=Msa1134410-mRNA-1:three_prime_utr;Parent=Msa1134410-mRNA-1 |
| chr7_4 | three_prime_UTR | 884397 | 884466 | 884397 | ID=Msa1134410-mRNA-1:three_prime_utr;Parent=Msa1134410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
