Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437060 | XP_013449967.1 | 96.950 | 459 | 14 | 0 | 1 | 459 | 1 | 459 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437060 | sp|Q0WT19|IP5P8_ARATH | 56.646 | 489 | 158 | 12 | 6 | 459 | 6 | 475 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437060 | A0A072UDV5 | 96.950 | 459 | 14 | 0 | 1 | 459 | 1 | 459 | 0.0 | 931 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025570 | Msa0437060 | 0.834956 | 2.220168e-56 | -8.615850e-47 |
| Msa0027020 | Msa0437060 | -0.806304 | 8.777697e-50 | -8.615850e-47 |
| Msa0033190 | Msa0437060 | -0.800303 | 1.535243e-48 | -8.615850e-47 |
| Msa0038150 | Msa0437060 | -0.820977 | 5.156228e-53 | -8.615850e-47 |
| Msa0038750 | Msa0437060 | -0.805297 | 1.428916e-49 | -8.615850e-47 |
| Msa0046020 | Msa0437060 | -0.807369 | 5.227499e-50 | -8.615850e-47 |
| Msa0047560 | Msa0437060 | -0.804281 | 2.329625e-49 | -8.615850e-47 |
| Msa0073110 | Msa0437060 | 0.844197 | 8.775139e-59 | -8.615850e-47 |
| Msa0074860 | Msa0437060 | -0.800180 | 1.626811e-48 | -8.615850e-47 |
| Msa0075990 | Msa0437060 | -0.802947 | 4.404879e-49 | -8.615850e-47 |
| Msa0093360 | Msa0437060 | -0.804000 | 2.665306e-49 | -8.615850e-47 |
| Msa0106540 | Msa0437060 | 0.800594 | 1.339614e-48 | -8.615850e-47 |
| Msa0121320 | Msa0437060 | 0.814282 | 1.668312e-51 | -8.615850e-47 |
| Msa0122170 | Msa0437060 | -0.803953 | 2.725440e-49 | -8.615850e-47 |
| Msa0124460 | Msa0437060 | -0.807002 | 6.251461e-50 | -8.615850e-47 |
| Msa0127220 | Msa0437060 | -0.800318 | 1.524659e-48 | -8.615850e-47 |
| Msa0127350 | Msa0437060 | -0.819707 | 1.008236e-52 | -8.615850e-47 |
| Msa0141410 | Msa0437060 | 0.812923 | 3.320746e-51 | -8.615850e-47 |
| Msa0167160 | Msa0437060 | -0.805166 | 1.522385e-49 | -8.615850e-47 |
| Msa0212950 | Msa0437060 | -0.816206 | 6.231156e-52 | -8.615850e-47 |
| Msa0225080 | Msa0437060 | -0.814447 | 1.533808e-51 | -8.615850e-47 |
| Msa0225280 | Msa0437060 | -0.805501 | 1.294580e-49 | -8.615850e-47 |
| Msa0229350 | Msa0437060 | -0.808921 | 2.441771e-50 | -8.615850e-47 |
| Msa0369080 | Msa0437060 | -0.806692 | 7.270781e-50 | -8.615850e-47 |
| Msa0380470 | Msa0437060 | -0.803034 | 4.225902e-49 | -8.615850e-47 |
| Msa0386230 | Msa0437060 | -0.806468 | 8.106874e-50 | -8.615850e-47 |
| Msa0403740 | Msa0437060 | -0.818290 | 2.117482e-52 | -8.615850e-47 |
| Msa0416430 | Msa0437060 | -0.805127 | 1.550667e-49 | -8.615850e-47 |
| Msa0419150 | Msa0437060 | -0.818504 | 1.893425e-52 | -8.615850e-47 |
| Msa0427230 | Msa0437060 | -0.801850 | 7.412741e-49 | -8.615850e-47 |
| Msa0428300 | Msa0437060 | -0.813502 | 2.477718e-51 | -8.615850e-47 |
| Msa0428720 | Msa0437060 | -0.814193 | 1.745004e-51 | -8.615850e-47 |
| Msa0436660 | Msa0437060 | -0.808245 | 3.404993e-50 | -8.615850e-47 |
| Msa0437060 | Msa0437820 | -0.808358 | 3.221758e-50 | -8.615850e-47 |
| Msa0437060 | Msa0454770 | 0.822337 | 2.500211e-53 | -8.615850e-47 |
| Msa0437060 | Msa0456450 | -0.815704 | 8.067095e-52 | -8.615850e-47 |
| Msa0437060 | Msa0457070 | -0.806120 | 9.597494e-50 | -8.615850e-47 |
| Msa0437060 | Msa0463030 | -0.806780 | 6.965994e-50 | -8.615850e-47 |
| Msa0437060 | Msa0464980 | -0.819427 | 1.167826e-52 | -8.615850e-47 |
| Msa0437060 | Msa0469770 | -0.806422 | 8.288359e-50 | -8.615850e-47 |
| Msa0437060 | Msa0473740 | -0.802801 | 4.722321e-49 | -8.615850e-47 |
| Msa0437060 | Msa0474660 | -0.809444 | 1.886649e-50 | -8.615850e-47 |
| Msa0437060 | Msa0492330 | -0.800569 | 1.355118e-48 | -8.615850e-47 |
| Msa0437060 | Msa0500580 | -0.803666 | 3.126046e-49 | -8.615850e-47 |
| Msa0437060 | Msa0506700 | -0.808512 | 2.986899e-50 | -8.615850e-47 |
| Msa0437060 | Msa0519070 | -0.815496 | 8.973534e-52 | -8.615850e-47 |
| Msa0437060 | Msa0557440 | -0.815494 | 8.982469e-52 | -8.615850e-47 |
| Msa0437060 | Msa0560950 | 0.820257 | 7.545759e-53 | -8.615850e-47 |
| Msa0437060 | Msa0567330 | 0.818266 | 2.143949e-52 | -8.615850e-47 |
| Msa0437060 | Msa0567570 | 0.801920 | 7.169442e-49 | -8.615850e-47 |
| Msa0437060 | Msa0572730 | -0.810902 | 9.150271e-51 | -8.615850e-47 |
| Msa0437060 | Msa0576320 | 0.806074 | 9.815409e-50 | -8.615850e-47 |
| Msa0437060 | Msa0580410 | -0.804371 | 2.230648e-49 | -8.615850e-47 |
| Msa0437060 | Msa0580890 | -0.822670 | 2.092022e-53 | -8.615850e-47 |
| Msa0437060 | Msa0581350 | 0.830746 | 2.469259e-55 | -8.615850e-47 |
| Msa0437060 | Msa0582270 | -0.813483 | 2.501876e-51 | -8.615850e-47 |
| Msa0437060 | Msa0583270 | -0.811450 | 6.959186e-51 | -8.615850e-47 |
| Msa0437060 | Msa0590620 | -0.806091 | 9.732630e-50 | -8.615850e-47 |
| Msa0437060 | Msa0605150 | -0.806982 | 6.314299e-50 | -8.615850e-47 |
| Msa0437060 | Msa0615070 | 0.813766 | 2.167507e-51 | -8.615850e-47 |
| Msa0437060 | Msa0622450 | -0.817502 | 3.189523e-52 | -8.615850e-47 |
| Msa0437060 | Msa0638300 | -0.800478 | 1.414115e-48 | -8.615850e-47 |
| Msa0437060 | Msa0676570 | -0.801368 | 9.305741e-49 | -8.615850e-47 |
| Msa0437060 | Msa0695250 | -0.813853 | 2.074038e-51 | -8.615850e-47 |
| Msa0437060 | Msa0698110 | 0.809888 | 1.514338e-50 | -8.615850e-47 |
| Msa0437060 | Msa0707330 | 0.813693 | 2.249604e-51 | -8.615850e-47 |
| Msa0437060 | Msa0713570 | -0.805858 | 1.089537e-49 | -8.615850e-47 |
| Msa0437060 | Msa0717540 | -0.816764 | 4.674857e-52 | -8.615850e-47 |
| Msa0437060 | Msa0719330 | -0.807323 | 5.345447e-50 | -8.615850e-47 |
| Msa0437060 | Msa0755550 | -0.807773 | 4.290855e-50 | -8.615850e-47 |
| Msa0437060 | Msa0758880 | -0.829924 | 3.919600e-55 | -8.615850e-47 |
| Msa0437060 | Msa0788160 | -0.816335 | 5.831250e-52 | -8.615850e-47 |
| Msa0437060 | Msa0790650 | -0.814412 | 1.560838e-51 | -8.615850e-47 |
| Msa0437060 | Msa0793130 | -0.807263 | 5.505505e-50 | -8.615850e-47 |
| Msa0437060 | Msa0795910 | -0.803997 | 2.668146e-49 | -8.615850e-47 |
| Msa0437060 | Msa0797180 | -0.804465 | 2.132279e-49 | -8.615850e-47 |
| Msa0437060 | Msa0801920 | -0.830266 | 3.235956e-55 | -8.615850e-47 |
| Msa0437060 | Msa0820130 | -0.807301 | 5.405060e-50 | -8.615850e-47 |
| Msa0437060 | Msa0827340 | -0.814216 | 1.725220e-51 | -8.615850e-47 |
| Msa0437060 | Msa0829250 | -0.814465 | 1.519214e-51 | -8.615850e-47 |
| Msa0437060 | Msa0833360 | -0.803587 | 3.246430e-49 | -8.615850e-47 |
| Msa0437060 | Msa0835050 | -0.805009 | 1.641219e-49 | -8.615850e-47 |
| Msa0437060 | Msa0838120 | -0.831373 | 1.731680e-55 | -8.615850e-47 |
| Msa0437060 | Msa0853200 | -0.800863 | 1.180351e-48 | -8.615850e-47 |
| Msa0437060 | Msa0868500 | -0.807394 | 5.163456e-50 | -8.615850e-47 |
| Msa0437060 | Msa0868510 | -0.813321 | 2.715739e-51 | -8.615850e-47 |
| Msa0437060 | Msa0868520 | -0.811283 | 7.564695e-51 | -8.615850e-47 |
| Msa0437060 | Msa0941410 | -0.806919 | 6.509720e-50 | -8.615850e-47 |
| Msa0437060 | Msa0941420 | -0.817037 | 4.059241e-52 | -8.615850e-47 |
| Msa0437060 | Msa0945160 | -0.818605 | 1.796169e-52 | -8.615850e-47 |
| Msa0437060 | Msa0964400 | -0.810503 | 1.116001e-50 | -8.615850e-47 |
| Msa0437060 | Msa0973010 | -0.803333 | 3.665325e-49 | -8.615850e-47 |
| Msa0437060 | Msa0978540 | -0.808457 | 3.068768e-50 | -8.615850e-47 |
| Msa0437060 | Msa0978550 | -0.814801 | 1.280491e-51 | -8.615850e-47 |
| Msa0437060 | Msa0978560 | -0.811812 | 5.805593e-51 | -8.615850e-47 |
| Msa0437060 | Msa0984230 | -0.802729 | 4.884904e-49 | -8.615850e-47 |
| Msa0437060 | Msa0998660 | -0.804240 | 2.374889e-49 | -8.615850e-47 |
| Msa0437060 | Msa1001120 | 0.809118 | 2.215949e-50 | -8.615850e-47 |
| Msa0437060 | Msa1002550 | -0.817110 | 3.908469e-52 | -8.615850e-47 |
| Msa0437060 | Msa1016580 | -0.803010 | 4.274036e-49 | -8.615850e-47 |
| Msa0437060 | Msa1020160 | -0.801014 | 1.099242e-48 | -8.615850e-47 |
| Msa0437060 | Msa1028150 | 0.808189 | 3.500319e-50 | -8.615850e-47 |
| Msa0437060 | Msa1028890 | -0.820949 | 5.232865e-53 | -8.615850e-47 |
| Msa0437060 | Msa1031190 | -0.813946 | 1.978846e-51 | -8.615850e-47 |
| Msa0437060 | Msa1036260 | -0.801587 | 8.393455e-49 | -8.615850e-47 |
| Msa0437060 | Msa1037440 | -0.803384 | 3.576999e-49 | -8.615850e-47 |
| Msa0437060 | Msa1044050 | -0.808489 | 3.020755e-50 | -8.615850e-47 |
| Msa0437060 | Msa1062060 | 0.809261 | 2.065335e-50 | -8.615850e-47 |
| Msa0437060 | Msa1066770 | 0.810772 | 9.760078e-51 | -8.615850e-47 |
| Msa0437060 | Msa1068010 | -0.819200 | 1.316117e-52 | -8.615850e-47 |
| Msa0437060 | Msa1070370 | -0.814517 | 1.480151e-51 | -8.615850e-47 |
| Msa0437060 | Msa1106730 | -0.804372 | 2.229833e-49 | -8.615850e-47 |
| Msa0437060 | Msa1112190 | 0.811716 | 6.091102e-51 | -8.615850e-47 |
| Msa0437060 | Msa1119420 | -0.813615 | 2.340317e-51 | -8.615850e-47 |
| Msa0437060 | Msa1121720 | -0.812945 | 3.282977e-51 | -8.615850e-47 |
| Msa0437060 | Msa1122710 | -0.809323 | 2.002964e-50 | -8.615850e-47 |
| Msa0437060 | Msa1123730 | 0.955129 | 6.169995e-113 | -8.615850e-47 |
| Msa0437060 | Msa1129880 | -0.813208 | 2.874892e-51 | -8.615850e-47 |
| Msa0437060 | Msa1130150 | -0.815108 | 1.094370e-51 | -8.615850e-47 |
| Msa0437060 | Msa1130850 | -0.806634 | 7.477331e-50 | -8.615850e-47 |
| Msa0437060 | Msa1130910 | -0.805008 | 1.642755e-49 | -8.615850e-47 |
| Msa0437060 | Msa1132250 | -0.807524 | 4.847128e-50 | -8.615850e-47 |
| Msa0437060 | Msa1132880 | -0.805248 | 1.463302e-49 | -8.615850e-47 |
| Msa0437060 | Msa1146010 | 0.801143 | 1.034487e-48 | -8.615850e-47 |
| Msa0437060 | Msa1158180 | -0.812956 | 3.264795e-51 | -8.615850e-47 |
| Msa0437060 | Msa1169870 | 0.969186 | 9.391077e-130 | -8.615850e-47 |
| Msa0437060 | Msa1184100 | -0.801001 | 1.106223e-48 | -8.615850e-47 |
| Msa0437060 | Msa1191530 | -0.810827 | 9.498892e-51 | -8.615850e-47 |
| Msa0437060 | Msa1204870 | -0.801161 | 1.026006e-48 | -8.615850e-47 |
| Msa0437060 | Msa1205270 | -0.819670 | 1.028339e-52 | -8.615850e-47 |
| Msa0437060 | Msa1207660 | -0.807045 | 6.121497e-50 | -8.615850e-47 |
| Msa0437060 | Msa1209990 | -0.807466 | 4.986070e-50 | -8.615850e-47 |
| Msa0437060 | Msa1212150 | -0.802720 | 4.907498e-49 | -8.615850e-47 |
| Msa0437060 | Msa1221270 | 0.820622 | 6.223453e-53 | -8.615850e-47 |
| Msa0437060 | Msa1222900 | -0.803063 | 4.168034e-49 | -8.615850e-47 |
| Msa0437060 | Msa1228260 | -0.803434 | 3.492933e-49 | -8.615850e-47 |
| Msa0437060 | Msa1255030 | -0.813388 | 2.624804e-51 | -8.615850e-47 |
| Msa0437060 | Msa1256490 | -0.802650 | 5.073254e-49 | -8.615850e-47 |
| Msa0437060 | Msa1266120 | -0.805766 | 1.139085e-49 | -8.615850e-47 |
| Msa0437060 | Msa1266750 | -0.807666 | 4.521649e-50 | -8.615850e-47 |
| Msa0437060 | Msa1271220 | -0.802388 | 5.743825e-49 | -8.615850e-47 |
| Msa0437060 | Msa1284020 | 0.802620 | 5.145487e-49 | -8.615850e-47 |
| Msa0437060 | Msa1295480 | -0.809437 | 1.893300e-50 | -8.615850e-47 |
| Msa0437060 | Msa1297220 | -0.807831 | 4.170223e-50 | -8.615850e-47 |
| Msa0437060 | Msa1298480 | -0.806726 | 7.150639e-50 | -8.615850e-47 |
| Msa0437060 | Msa1301610 | -0.804743 | 1.865703e-49 | -8.615850e-47 |
| Msa0437060 | Msa1303690 | -0.811984 | 5.326831e-51 | -8.615850e-47 |
| Msa0437060 | Msa1331530 | -0.801148 | 1.032282e-48 | -8.615850e-47 |
| Msa0437060 | Msa1338810 | -0.803121 | 4.054423e-49 | -8.615850e-47 |
| Msa0437060 | Msa1341710 | -0.827527 | 1.489713e-54 | -8.615850e-47 |
| Msa0437060 | Msa1342360 | -0.816174 | 6.335645e-52 | -8.615850e-47 |
| Msa0437060 | Msa1350590 | -0.801866 | 7.356228e-49 | -8.615850e-47 |
| Msa0437060 | Msa1356100 | -0.811178 | 7.974082e-51 | -8.615850e-47 |
| Msa0437060 | Msa1361580 | -0.812143 | 4.916175e-51 | -8.615850e-47 |
| Msa0437060 | Msa1363170 | -0.811641 | 6.324318e-51 | -8.615850e-47 |
| Msa0437060 | Msa1373420 | -0.807548 | 4.790613e-50 | -8.615850e-47 |
| Msa0437060 | Msa1375650 | -0.801374 | 9.280209e-49 | -8.615850e-47 |
| Msa0437060 | Msa1377980 | -0.806162 | 9.402451e-50 | -8.615850e-47 |
| Msa0437060 | Msa1380740 | 0.813274 | 2.781398e-51 | -8.615850e-47 |
| Msa0437060 | Msa1386910 | -0.805062 | 1.600291e-49 | -8.615850e-47 |
| Msa0437060 | Msa1395380 | -0.811649 | 6.297943e-51 | -8.615850e-47 |
| Msa0437060 | Msa1405830 | 0.801277 | 9.712257e-49 | -8.615850e-47 |
| Msa0437060 | Msa1407810 | 0.812279 | 4.593101e-51 | -8.615850e-47 |
| Msa0437060 | Msa1408230 | -0.820342 | 7.214996e-53 | -8.615850e-47 |
| Msa0437060 | Msa1408280 | -0.806628 | 7.500898e-50 | -8.615850e-47 |
| Msa0437060 | Msa1415510 | -0.817045 | 4.042961e-52 | -8.615850e-47 |
| Msa0437060 | Msa1432100 | -0.802449 | 5.581615e-49 | -8.615850e-47 |
| Msa0437060 | Msa1433360 | 0.811530 | 6.686803e-51 | -8.615850e-47 |
| Msa0437060 | Msa1437780 | 0.813346 | 2.682158e-51 | -8.615850e-47 |
| Msa0437060 | Msa1444130 | -0.811688 | 6.176624e-51 | -8.615850e-47 |
| Msa0437060 | Msa1444690 | -0.813509 | 2.468801e-51 | -8.615850e-47 |
| Msa0437060 | Msa1451200 | -0.800759 | 1.239619e-48 | -8.615850e-47 |
| Msa0437060 | Msa1454300 | -0.811089 | 8.332351e-51 | -8.615850e-47 |
| Msa0437060 | Msa1462700 | -0.801799 | 7.591835e-49 | -8.615850e-47 |
| Msa0253230 | Msa0437060 | -0.816841 | 4.492479e-52 | -8.615850e-47 |
| Msa0255770 | Msa0437060 | -0.804675 | 1.927592e-49 | -8.615850e-47 |
| Msa0261350 | Msa0437060 | -0.817561 | 3.093504e-52 | -8.615850e-47 |
| Msa0266150 | Msa0437060 | -0.817318 | 3.508527e-52 | -8.615850e-47 |
| Msa0266330 | Msa0437060 | -0.805151 | 1.532871e-49 | -8.615850e-47 |
| Msa0267450 | Msa0437060 | -0.803429 | 3.500494e-49 | -8.615850e-47 |
| Msa0267510 | Msa0437060 | -0.806814 | 6.850665e-50 | -8.615850e-47 |
| Msa0270730 | Msa0437060 | -0.811862 | 5.662323e-51 | -8.615850e-47 |
| Msa0279810 | Msa0437060 | 0.818451 | 1.947380e-52 | -8.615850e-47 |
| Msa0292060 | Msa0437060 | -0.805545 | 1.267743e-49 | -8.615850e-47 |
| Msa0298820 | Msa0437060 | -0.802777 | 4.776402e-49 | -8.615850e-47 |
| Msa0299130 | Msa0437060 | -0.824486 | 7.864540e-54 | -8.615850e-47 |
| Msa0303900 | Msa0437060 | 0.802385 | 5.753995e-49 | -8.615850e-47 |
| Msa0317820 | Msa0437060 | -0.803618 | 3.198422e-49 | -8.615850e-47 |
| Msa0319220 | Msa0437060 | 0.821039 | 4.990289e-53 | -8.615850e-47 |
| Msa0331070 | Msa0437060 | -0.812213 | 4.746519e-51 | -8.615850e-47 |
| Msa0333350 | Msa0437060 | -0.812564 | 3.978714e-51 | -8.615850e-47 |
| Msa0334320 | Msa0437060 | 0.801104 | 1.053991e-48 | -8.615850e-47 |
| Msa0340700 | Msa0437060 | -0.823032 | 1.722976e-53 | -8.615850e-47 |
| Msa0341950 | Msa0437060 | -0.805683 | 1.185652e-49 | -8.615850e-47 |
| Msa0364030 | Msa0437060 | -0.818556 | 1.842948e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437060 | MtrunA17_Chr7g0263111 | 96.732 | 459 | 14 | 1 | 1 | 459 | 1 | 458 | 0.0 | 924 |
| Msa0437060 | MtrunA17_Chr5g0394901 | 56.028 | 282 | 93 | 2 | 169 | 441 | 351 | 610 | 6.34e-105 | 325 |
| Msa0437060 | MtrunA17_Chr5g0394901 | 42.667 | 150 | 78 | 5 | 16 | 160 | 18 | 164 | 2.92e-25 | 108 |
| Msa0437060 | MtrunA17_Chr1g0165011 | 41.958 | 429 | 184 | 9 | 11 | 399 | 10 | 413 | 8.71e-103 | 314 |
| Msa0437060 | MtrunA17_Chr1g0205121 | 57.736 | 265 | 102 | 2 | 157 | 412 | 301 | 564 | 1.53e-102 | 317 |
| Msa0437060 | MtrunA17_Chr1g0205121 | 43.396 | 159 | 83 | 4 | 5 | 159 | 6 | 161 | 9.30e-28 | 116 |
| Msa0437060 | MtrunA17_Chr7g0260081 | 57.752 | 258 | 100 | 1 | 160 | 408 | 276 | 533 | 5.41e-101 | 312 |
| Msa0437060 | MtrunA17_Chr7g0260081 | 43.949 | 157 | 73 | 4 | 10 | 159 | 13 | 161 | 3.49e-29 | 120 |
| Msa0437060 | MtrunA17_Chr6g0479511 | 45.349 | 344 | 153 | 7 | 91 | 401 | 47 | 388 | 1.04e-100 | 306 |
| Msa0437060 | MtrunA17_Chr1g0185281 | 56.589 | 258 | 103 | 1 | 153 | 401 | 269 | 526 | 1.67e-99 | 309 |
| Msa0437060 | MtrunA17_Chr1g0185281 | 42.529 | 174 | 86 | 4 | 6 | 167 | 7 | 178 | 1.02e-32 | 130 |
| Msa0437060 | MtrunA17_Chr8g0375751 | 41.667 | 432 | 212 | 8 | 11 | 429 | 8 | 412 | 2.79e-99 | 304 |
| Msa0437060 | MtrunA17_Chr8g0382571 | 54.962 | 262 | 105 | 3 | 164 | 412 | 203 | 464 | 1.07e-96 | 299 |
| Msa0437060 | MtrunA17_Chr8g0382571 | 66.667 | 72 | 24 | 0 | 89 | 160 | 38 | 109 | 7.07e-24 | 103 |
| Msa0437060 | MtrunA17_Chr6g0452181 | 43.583 | 374 | 171 | 7 | 76 | 411 | 44 | 415 | 7.30e-96 | 296 |
| Msa0437060 | MtrunA17_Chr8g0355021 | 53.150 | 254 | 109 | 2 | 165 | 408 | 220 | 473 | 2.01e-89 | 280 |
| Msa0437060 | MtrunA17_Chr8g0355021 | 60.563 | 71 | 28 | 0 | 89 | 159 | 61 | 131 | 1.61e-20 | 94.0 |
| Msa0437060 | MtrunA17_Chr5g0400311 | 47.163 | 282 | 131 | 3 | 152 | 425 | 345 | 616 | 4.80e-81 | 263 |
| Msa0437060 | MtrunA17_Chr5g0400311 | 33.143 | 175 | 101 | 3 | 11 | 171 | 13 | 185 | 5.81e-25 | 108 |
| Msa0437060 | MtrunA17_Chr1g0201271 | 51.440 | 243 | 106 | 5 | 175 | 409 | 374 | 612 | 7.72e-80 | 259 |
| Msa0437060 | MtrunA17_Chr1g0201271 | 33.136 | 169 | 105 | 4 | 11 | 173 | 18 | 184 | 9.70e-19 | 89.0 |
| Msa0437060 | MtrunA17_Chr4g0054941 | 45.455 | 286 | 136 | 4 | 128 | 399 | 264 | 543 | 7.72e-78 | 253 |
| Msa0437060 | MtrunA17_Chr4g0054941 | 35.484 | 155 | 79 | 4 | 11 | 162 | 10 | 146 | 1.70e-22 | 100 |
| Msa0437060 | MtrunA17_Chr4g0054951 | 48.347 | 242 | 118 | 2 | 171 | 405 | 309 | 550 | 5.15e-76 | 248 |
| Msa0437060 | MtrunA17_Chr4g0054951 | 34.146 | 164 | 84 | 5 | 11 | 171 | 13 | 155 | 5.23e-23 | 102 |
| Msa0437060 | MtrunA17_Chr6g0466801 | 50.400 | 250 | 112 | 5 | 168 | 409 | 365 | 610 | 7.80e-76 | 249 |
| Msa0437060 | MtrunA17_Chr6g0466801 | 56.757 | 74 | 32 | 0 | 86 | 159 | 94 | 167 | 1.09e-20 | 95.1 |
| Msa0437060 | MtrunA17_Chr1g0189231 | 27.941 | 476 | 234 | 16 | 62 | 446 | 468 | 925 | 8.35e-41 | 156 |
| Msa0437060 | MtrunA17_Chr1g0154491 | 26.979 | 341 | 198 | 13 | 62 | 387 | 21 | 325 | 7.26e-18 | 84.7 |
| Msa0437060 | MtrunA17_Chr6g0488541 | 30.688 | 189 | 110 | 5 | 90 | 269 | 562 | 738 | 1.70e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437060 | AT2G37440.1 | 56.646 | 489 | 158 | 12 | 6 | 459 | 6 | 475 | 0.0 | 523 |
| Msa0437060 | AT2G37440.3 | 56.646 | 489 | 158 | 12 | 6 | 459 | 6 | 475 | 0.0 | 523 |
| Msa0437060 | AT2G37440.2 | 59.606 | 406 | 114 | 9 | 92 | 459 | 1 | 394 | 6.50e-161 | 461 |
| Msa0437060 | AT2G32010.2 | 56.667 | 270 | 108 | 1 | 152 | 412 | 306 | 575 | 1.67e-104 | 323 |
| Msa0437060 | AT2G32010.2 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 4.28e-28 | 117 |
| Msa0437060 | AT2G32010.1 | 56.667 | 270 | 108 | 1 | 152 | 412 | 306 | 575 | 1.67e-104 | 323 |
| Msa0437060 | AT2G32010.1 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 4.28e-28 | 117 |
| Msa0437060 | AT2G32010.4 | 56.667 | 270 | 108 | 1 | 152 | 412 | 306 | 575 | 1.67e-104 | 323 |
| Msa0437060 | AT2G32010.4 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 4.28e-28 | 117 |
| Msa0437060 | AT2G32010.3 | 56.667 | 270 | 108 | 1 | 152 | 412 | 306 | 575 | 1.67e-104 | 323 |
| Msa0437060 | AT2G32010.3 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 4.28e-28 | 117 |
| Msa0437060 | AT2G01900.1 | 48.358 | 335 | 154 | 4 | 85 | 400 | 53 | 387 | 2.79e-104 | 317 |
| Msa0437060 | AT1G05470.2 | 53.401 | 294 | 106 | 2 | 157 | 441 | 334 | 605 | 2.99e-104 | 323 |
| Msa0437060 | AT1G05470.2 | 41.566 | 166 | 85 | 4 | 1 | 159 | 1 | 161 | 8.68e-29 | 119 |
| Msa0437060 | AT1G05470.1 | 53.401 | 294 | 106 | 2 | 157 | 441 | 334 | 605 | 2.99e-104 | 323 |
| Msa0437060 | AT1G05470.1 | 41.566 | 166 | 85 | 4 | 1 | 159 | 1 | 161 | 8.68e-29 | 119 |
| Msa0437060 | AT2G01900.3 | 48.358 | 335 | 154 | 4 | 85 | 400 | 61 | 395 | 3.21e-104 | 317 |
| Msa0437060 | AT5G65090.2 | 57.200 | 250 | 97 | 3 | 164 | 404 | 192 | 440 | 2.15e-99 | 306 |
| Msa0437060 | AT5G65090.2 | 58.667 | 75 | 31 | 0 | 90 | 164 | 10 | 84 | 6.30e-22 | 98.6 |
| Msa0437060 | AT3G63240.2 | 58.000 | 250 | 96 | 1 | 168 | 408 | 274 | 523 | 5.63e-99 | 307 |
| Msa0437060 | AT3G63240.2 | 44.937 | 158 | 78 | 5 | 6 | 160 | 7 | 158 | 1.78e-29 | 121 |
| Msa0437060 | AT3G63240.1 | 58.000 | 250 | 96 | 1 | 168 | 408 | 274 | 523 | 5.63e-99 | 307 |
| Msa0437060 | AT3G63240.1 | 44.937 | 158 | 78 | 5 | 6 | 160 | 7 | 158 | 1.78e-29 | 121 |
| Msa0437060 | AT5G65090.3 | 57.200 | 250 | 97 | 3 | 164 | 404 | 255 | 503 | 1.35e-98 | 306 |
| Msa0437060 | AT5G65090.3 | 58.667 | 75 | 31 | 0 | 90 | 164 | 73 | 147 | 1.10e-21 | 98.2 |
| Msa0437060 | AT5G65090.1 | 57.200 | 250 | 97 | 3 | 164 | 404 | 255 | 503 | 1.35e-98 | 306 |
| Msa0437060 | AT5G65090.1 | 58.667 | 75 | 31 | 0 | 90 | 164 | 73 | 147 | 1.10e-21 | 98.2 |
| Msa0437060 | AT2G01900.2 | 46.866 | 335 | 150 | 5 | 85 | 400 | 53 | 378 | 2.95e-98 | 301 |
| Msa0437060 | AT5G04980.4 | 57.806 | 237 | 90 | 2 | 171 | 397 | 156 | 392 | 8.94e-95 | 292 |
| Msa0437060 | AT5G04980.2 | 57.806 | 237 | 90 | 2 | 171 | 397 | 220 | 456 | 4.43e-94 | 292 |
| Msa0437060 | AT5G04980.2 | 61.765 | 68 | 26 | 0 | 89 | 156 | 37 | 104 | 1.83e-18 | 88.2 |
| Msa0437060 | AT5G04980.1 | 57.806 | 237 | 90 | 2 | 171 | 397 | 191 | 427 | 4.99e-94 | 291 |
| Msa0437060 | AT5G04980.1 | 61.765 | 68 | 26 | 0 | 89 | 156 | 8 | 75 | 1.87e-18 | 87.8 |
| Msa0437060 | AT5G04980.3 | 57.806 | 237 | 90 | 2 | 171 | 397 | 191 | 427 | 4.99e-94 | 291 |
| Msa0437060 | AT5G04980.3 | 61.765 | 68 | 26 | 0 | 89 | 156 | 8 | 75 | 1.87e-18 | 87.8 |
| Msa0437060 | AT1G34120.5 | 50.840 | 238 | 107 | 3 | 168 | 397 | 178 | 413 | 3.70e-81 | 258 |
| Msa0437060 | AT1G34120.1 | 50.840 | 238 | 107 | 3 | 168 | 397 | 329 | 564 | 2.69e-79 | 257 |
| Msa0437060 | AT1G34120.1 | 55.714 | 70 | 31 | 0 | 90 | 159 | 101 | 170 | 1.34e-19 | 92.0 |
| Msa0437060 | AT1G34120.2 | 50.840 | 238 | 107 | 3 | 168 | 397 | 333 | 568 | 3.53e-79 | 257 |
| Msa0437060 | AT1G34120.2 | 55.714 | 70 | 31 | 0 | 90 | 159 | 105 | 174 | 1.49e-19 | 92.0 |
| Msa0437060 | AT4G18010.1 | 50.000 | 234 | 111 | 1 | 170 | 397 | 387 | 620 | 5.40e-78 | 255 |
| Msa0437060 | AT4G18010.1 | 33.889 | 180 | 96 | 6 | 6 | 164 | 8 | 185 | 4.68e-23 | 102 |
| Msa0437060 | AT1G34120.3 | 50.840 | 238 | 106 | 4 | 168 | 397 | 333 | 567 | 1.72e-77 | 253 |
| Msa0437060 | AT1G34120.3 | 55.714 | 70 | 31 | 0 | 90 | 159 | 105 | 174 | 1.59e-19 | 91.7 |
| Msa0437060 | AT1G71710.2 | 44.912 | 285 | 135 | 7 | 135 | 409 | 369 | 641 | 2.12e-74 | 246 |
| Msa0437060 | AT1G71710.2 | 53.086 | 81 | 37 | 1 | 79 | 159 | 109 | 188 | 5.31e-21 | 96.7 |
| Msa0437060 | AT1G71710.1 | 44.912 | 285 | 135 | 7 | 135 | 409 | 378 | 650 | 2.59e-74 | 246 |
| Msa0437060 | AT1G71710.1 | 53.086 | 81 | 37 | 1 | 79 | 159 | 118 | 197 | 6.33e-21 | 96.3 |
| Msa0437060 | AT4G18010.2 | 49.231 | 195 | 93 | 1 | 170 | 358 | 387 | 581 | 4.03e-61 | 209 |
| Msa0437060 | AT4G18010.2 | 32.778 | 180 | 98 | 4 | 6 | 164 | 8 | 185 | 5.34e-23 | 102 |
| Msa0437060 | AT1G34120.4 | 51.701 | 147 | 63 | 2 | 168 | 306 | 329 | 475 | 3.15e-44 | 161 |
| Msa0437060 | AT1G34120.4 | 55.714 | 70 | 31 | 0 | 90 | 159 | 101 | 170 | 9.26e-20 | 92.0 |
| Msa0437060 | AT1G65580.2 | 28.246 | 439 | 205 | 14 | 58 | 404 | 209 | 629 | 6.63e-44 | 165 |
| Msa0437060 | AT1G65580.1 | 28.246 | 439 | 205 | 14 | 58 | 404 | 475 | 895 | 1.89e-43 | 164 |
| Msa0437060 | AT1G05630.2 | 28.603 | 458 | 252 | 14 | 62 | 458 | 541 | 984 | 9.82e-43 | 162 |
| Msa0437060 | AT1G05630.3 | 30.747 | 348 | 183 | 11 | 62 | 365 | 541 | 874 | 1.73e-40 | 155 |
| Msa0437060 | AT2G43900.2 | 26.652 | 454 | 254 | 15 | 69 | 459 | 556 | 993 | 3.39e-40 | 154 |
| Msa0437060 | AT2G43900.1 | 26.652 | 454 | 254 | 15 | 69 | 459 | 556 | 993 | 3.49e-40 | 154 |
| Msa0437060 | AT2G31830.2 | 29.870 | 385 | 193 | 12 | 89 | 413 | 579 | 946 | 6.76e-40 | 154 |
| Msa0437060 | AT2G31830.1 | 29.870 | 385 | 193 | 12 | 89 | 413 | 579 | 946 | 7.07e-40 | 154 |
| Msa0437060 | AT2G31830.3 | 31.348 | 319 | 163 | 9 | 89 | 365 | 579 | 883 | 9.72e-39 | 150 |
| Msa0437060 | AT1G05630.1 | 25.306 | 490 | 261 | 17 | 62 | 458 | 541 | 1018 | 5.29e-23 | 103 |
| Msa0437060 | AT1G47510.1 | 27.885 | 312 | 171 | 11 | 89 | 387 | 53 | 323 | 4.53e-22 | 97.4 |
| Msa0437060 | AT1G47510.4 | 32.843 | 204 | 110 | 8 | 197 | 387 | 72 | 261 | 1.25e-20 | 92.0 |
| Msa0437060 | AT1G47510.2 | 37.607 | 117 | 61 | 4 | 278 | 387 | 149 | 260 | 3.17e-14 | 73.2 |
Find 92 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTGTTTGTTGTGTTTA+GGG | 0.163432 | 3_2:+91023330 | None:intergenic |
| CCAGCTGACATATATGTTAT+TGG | 0.170567 | 3_2:-91024204 | Msa0437060:CDS |
| ACCTCAGATTATTCTGTTAC+AGG | 0.227155 | 3_2:-91025245 | Msa0437060:intron |
| TTTCATTGTTTGTTGTGTTT+AGG | 0.238927 | 3_2:+91023329 | None:intergenic |
| ACATGTGCAGTAACATTATT+TGG | 0.249799 | 3_2:-91022579 | Msa0437060:intron |
| CATTTAGTGGTACAATTTCT+TGG | 0.260400 | 3_2:+91023419 | None:intergenic |
| CATGGGCTACCTTGGAAATA+AGG | 0.275680 | 3_2:-91023173 | Msa0437060:intron |
| TGTTTAGGGCTTGATGAATA+AGG | 0.282900 | 3_2:+91023344 | None:intergenic |
| ACTAACATGGTTTCGATAAT+CGG | 0.290875 | 3_2:+91023228 | None:intergenic |
| CGAAATTAGCTGTGAAGAAT+TGG | 0.311761 | 3_2:-91025298 | Msa0437060:CDS |
| TGCAGTAACATTATTTGGTT+GGG | 0.323446 | 3_2:-91022574 | Msa0437060:intron |
| TCGGGTTGGCACCGGCATCA+TGG | 0.329476 | 3_2:-91023191 | Msa0437060:CDS |
| CAATTCTTCACAGCTAATTT+CGG | 0.340578 | 3_2:+91025299 | None:intergenic |
| AAATTACCAGAAAATTTATC+TGG | 0.355572 | 3_2:+91025069 | None:intergenic |
| CTGCTTCGTTTGCACTCACT+TGG | 0.363285 | 3_2:-91022808 | Msa0437060:CDS |
| CTCTTATGTAGGATGTTTGT+GGG | 0.379291 | 3_2:-91024297 | Msa0437060:intron |
| AATCAGAAAATGTACGTTAG+AGG | 0.381947 | 3_2:-91022074 | Msa0437060:CDS |
| CAGCTGACATATATGTTATT+GGG | 0.381964 | 3_2:-91024203 | Msa0437060:intron |
| GTTTGCACTCACTTGGCCTC+TGG | 0.396101 | 3_2:-91022801 | Msa0437060:CDS |
| TGCAAGTTTGAGCAACATAT+TGG | 0.398676 | 3_2:+91022365 | None:intergenic |
| ACAGGTGTGATAGAATTCTA+TGG | 0.399028 | 3_2:-91022112 | Msa0437060:intron |
| GTTTAGGGCTTGATGAATAA+GGG | 0.405435 | 3_2:+91023345 | None:intergenic |
| AGCACGTTCCCAGCATTTAG+TGG | 0.407177 | 3_2:+91023406 | None:intergenic |
| AGGGCTAGCCACTTTGCTGC+GGG | 0.416097 | 3_2:+91023364 | None:intergenic |
| TTTGTGGGGACGTGGAATGT+AGG | 0.418050 | 3_2:-91024282 | Msa0437060:CDS |
| AAAGTCACCAAATGAAAATT+CGG | 0.418750 | 3_2:-91024256 | Msa0437060:CDS |
| CTAAATGCTGGGAACGTGCT+TGG | 0.423876 | 3_2:-91023403 | Msa0437060:CDS |
| CCATTTGCTTGTTTGCTACC+AGG | 0.431277 | 3_2:+91023281 | None:intergenic |
| TAAATGCTGGGAACGTGCTT+GGG | 0.444324 | 3_2:-91023402 | Msa0437060:CDS |
| GAAATTGTACCACTAAATGC+TGG | 0.445434 | 3_2:-91023415 | Msa0437060:CDS |
| CGGGTTGGCACCGGCATCAT+GGG | 0.447268 | 3_2:-91023190 | Msa0437060:CDS |
| TTGTGGGGACGTGGAATGTA+GGG | 0.450793 | 3_2:-91024281 | Msa0437060:CDS |
| TGACGAGTTGCGTCGAAACT+TGG | 0.452102 | 3_2:-91022766 | Msa0437060:CDS |
| ACTCTTATGTAGGATGTTTG+TGG | 0.457552 | 3_2:-91024298 | Msa0437060:intron |
| TACAAATGGCGTGAAACGTT+CGG | 0.459480 | 3_2:-91024537 | Msa0437060:CDS |
| GTGCAGTAACATTATTTGGT+TGG | 0.462119 | 3_2:-91022575 | Msa0437060:intron |
| GCTGCAGCACAACAAGTAGA+TGG | 0.473238 | 3_2:+91021906 | None:intergenic |
| TCACTAATCCTCTCAACCTT+AGG | 0.476045 | 3_2:-91024487 | Msa0437060:intron |
| TTCATCAAGTATTTGTAAGT+AGG | 0.478887 | 3_2:+91022394 | None:intergenic |
| TTGAATTATCGACTTGCCGC+TGG | 0.479201 | 3_2:-91022547 | Msa0437060:CDS |
| GGGACAAGATCTTGGGATAG+TGG | 0.487764 | 3_2:+91021959 | None:intergenic |
| AGAGGATTAGTGATGAATGA+AGG | 0.488020 | 3_2:+91024497 | None:intergenic |
| GTACGAGGATGTAGCTATCT+TGG | 0.489085 | 3_2:+91025091 | None:intergenic |
| CTGGTCGAATATTTGAAGGT+TGG | 0.497523 | 3_2:-91022441 | Msa0437060:CDS |
| AATGCTGGTCGAATATTTGA+AGG | 0.500439 | 3_2:-91022445 | Msa0437060:CDS |
| GGCGTGAAACGTTCGGTGCA+TGG | 0.505889 | 3_2:-91024530 | Msa0437060:CDS |
| TGGTTGAAGCATTCTACAAA+TGG | 0.512632 | 3_2:-91024551 | Msa0437060:CDS |
| CCTGGTAGCAAACAAGCAAA+TGG | 0.520209 | 3_2:-91023281 | Msa0437060:CDS |
| TCAAAAGCAACGCTTTAGCC+TGG | 0.520681 | 3_2:-91023299 | Msa0437060:CDS |
| ACCGGCATCATGGGCTACCT+TGG | 0.522568 | 3_2:-91023181 | Msa0437060:CDS |
| TAGTCAATTGAAAGTGTCTC+GGG | 0.522741 | 3_2:-91023209 | Msa0437060:CDS |
| CCAATAACATATATGTCAGC+TGG | 0.523558 | 3_2:+91024204 | None:intergenic |
| TATAACGAACCTTATTTCCA+AGG | 0.527154 | 3_2:+91023164 | None:intergenic |
| TTAGTCAATTGAAAGTGTCT+CGG | 0.528023 | 3_2:-91023210 | Msa0437060:CDS |
| GTAGGATGTTTGTGGGGACG+TGG | 0.528198 | 3_2:-91024290 | Msa0437060:intron |
| CTACTACAAGAATCTTGAAA+CGG | 0.529886 | 3_2:+91021821 | None:intergenic |
| CTAAGGATGGAGCAGAATGC+TGG | 0.532553 | 3_2:-91022460 | Msa0437060:CDS |
| AATGTAGCAGAATTTGTGAA+TGG | 0.533693 | 3_2:+91021930 | None:intergenic |
| TGCTCAAACTTGCAAATCAA+AGG | 0.537586 | 3_2:-91022356 | Msa0437060:CDS |
| GCAGTAACATTATTTGGTTG+GGG | 0.544614 | 3_2:-91022573 | Msa0437060:intron |
| AAAGTGTCTCGGGTTGGCAC+CGG | 0.545675 | 3_2:-91023199 | Msa0437060:CDS |
| TCCAAGGTAGCCCATGATGC+CGG | 0.561325 | 3_2:+91023180 | None:intergenic |
| AAACGAAGCAGAATGTGGTT+TGG | 0.562582 | 3_2:+91022820 | None:intergenic |
| AGCATTTACCTAAGGTTGAG+AGG | 0.566487 | 3_2:+91024479 | None:intergenic |
| ATAGAGAATACACTGGCCTA+TGG | 0.566815 | 3_2:+91022033 | None:intergenic |
| AAGGGCTAGCCACTTTGCTG+CGG | 0.577787 | 3_2:+91023363 | None:intergenic |
| TGTGGGGACGTGGAATGTAG+GGG | 0.581088 | 3_2:-91024280 | Msa0437060:CDS |
| ACTCATGTTCTAGTATGCCA+AGG | 0.581273 | 3_2:+91022703 | None:intergenic |
| AGAATTCTATGGAAAGGAGA+AGG | 0.582288 | 3_2:-91022101 | Msa0437060:CDS |
| AGTCAAAATTCTCTGACCAT+AGG | 0.590762 | 3_2:-91022049 | Msa0437060:CDS |
| TGTGATAGAATTCTATGGAA+AGG | 0.592001 | 3_2:-91022107 | Msa0437060:CDS |
| CAGTAACATTATTTGGTTGG+GGG | 0.598927 | 3_2:-91022572 | Msa0437060:CDS |
| ACAGTGGCCCCGCAGCAAAG+TGG | 0.601199 | 3_2:-91023372 | Msa0437060:CDS |
| AAATTGTACCACTAAATGCT+GGG | 0.602264 | 3_2:-91023414 | Msa0437060:CDS |
| GTGGGGACGTGGAATGTAGG+GGG | 0.604727 | 3_2:-91024279 | Msa0437060:CDS |
| ATATTTGAAGGTTGGAACGA+AGG | 0.607113 | 3_2:-91022433 | Msa0437060:CDS |
| CTCATGTTCTAGTATGCCAA+GGG | 0.607226 | 3_2:+91022704 | None:intergenic |
| ACACTTTCAATTGACTAACA+TGG | 0.611634 | 3_2:+91023215 | None:intergenic |
| CAATTGAAAGTGTCTCGGGT+TGG | 0.613575 | 3_2:-91023205 | Msa0437060:CDS |
| GTAGCAAACAAGCAAATGGT+TGG | 0.614177 | 3_2:-91023277 | Msa0437060:CDS |
| CAGAAAATTTATCTGGTACG+AGG | 0.626787 | 3_2:+91025076 | None:intergenic |
| GTCACCACATTTCTCTCCAG+AGG | 0.633659 | 3_2:+91022785 | None:intergenic |
| GGGCTAGCCACTTTGCTGCG+GGG | 0.635408 | 3_2:+91023365 | None:intergenic |
| AGTGCAAACGAAGCAGAATG+TGG | 0.656443 | 3_2:+91022815 | None:intergenic |
| ACCTGTAACAGAATAATCTG+AGG | 0.659074 | 3_2:+91025244 | None:intergenic |
| ATGAATTTCATCGTAACCAG+CGG | 0.666776 | 3_2:+91022531 | None:intergenic |
| TTGGCCTCTGGAGAGAAATG+TGG | 0.675287 | 3_2:-91022789 | Msa0437060:CDS |
| AACTCGTGTTACTAGCAACA+AGG | 0.677771 | 3_2:-91021863 | Msa0437060:CDS |
| TCTTATGTAGGATGTTTGTG+GGG | 0.688950 | 3_2:-91024296 | Msa0437060:intron |
| GCGTCGAAACTTGGACATCG+CGG | 0.722714 | 3_2:-91022757 | Msa0437060:CDS |
| GTGCTTGGGTCTGAGAACAG+TGG | 0.725376 | 3_2:-91023388 | Msa0437060:CDS |
| GCTGTGAATAGAGAATACAC+TGG | 0.824587 | 3_2:+91022026 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACAAACTTTTTATTTTTT+GGG | + | chr3_2:91022384-91022403 | None:intergenic | 10.0% |
| !!! | ATTACAAACTTTTTATTTTT+TGG | + | chr3_2:91022385-91022404 | None:intergenic | 10.0% |
| !! | AAAAATAAAAAGTTTGTAAT+TGG | - | chr3_2:91022385-91022404 | Msa0437060:CDS | 10.0% |
| !!! | ATTTTAATTAAGATTGTGAT+TGG | - | chr3_2:91022044-91022063 | Msa0437060:CDS | 15.0% |
| !!! | TATTTTTTTGGAAGAAATAT+TGG | - | chr3_2:91022315-91022334 | Msa0437060:intron | 15.0% |
| !!! | TTACTGTAATTTTTTTCTTT+TGG | - | chr3_2:91022633-91022652 | Msa0437060:intron | 15.0% |
| !!! | TACTGTAATTTTTTTCTTTT+GGG | - | chr3_2:91022634-91022653 | Msa0437060:intron | 15.0% |
| !! | CTATCTAAGTAATTAATATT+TGG | - | chr3_2:91022660-91022679 | Msa0437060:intron | 15.0% |
| !!! | TTTATTTTATTTTTAGCAAG+AGG | - | chr3_2:91022901-91022920 | Msa0437060:intron | 15.0% |
| !! | TTAATTGATCCATATATAAA+AGG | + | chr3_2:91023199-91023218 | None:intergenic | 15.0% |
| !! | AAATTTCGTTAAATATTCTT+AGG | - | chr3_2:91023217-91023236 | Msa0437060:CDS | 15.0% |
| !! | TTAAATAATCATTGAAATCA+AGG | + | chr3_2:91023348-91023367 | None:intergenic | 15.0% |
| !! | ATCATATAAAAATAAGAAGT+TGG | + | chr3_2:91023714-91023733 | None:intergenic | 15.0% |
| !! | AAATCTAATTTATGTTGTAT+TGG | - | chr3_2:91023790-91023809 | Msa0437060:intron | 15.0% |
| !! | TCTTTATTACTATAAATCAA+TGG | - | chr3_2:91024625-91024644 | Msa0437060:intron | 15.0% |
| !!! | TAATTTGTTCTTTGTTAATT+TGG | - | chr3_2:91024651-91024670 | Msa0437060:intron | 15.0% |
| !!! | ATCTTTTAATTAATGTTTCT+TGG | - | chr3_2:91025082-91025101 | Msa0437060:CDS | 15.0% |
| !!! | ATGTTTTTGTTTAATCTTTG+TGG | - | chr3_2:91022095-91022114 | Msa0437060:CDS | 20.0% |
| !!! | TGTTTTTGTTTAATCTTTGT+GGG | - | chr3_2:91022096-91022115 | Msa0437060:CDS | 20.0% |
| !! | AAATTACCAGAAAATTTATC+TGG | + | chr3_2:91022188-91022207 | None:intergenic | 20.0% |
| !!! | AAATCATAAAACAAAGTGTT+GGG | + | chr3_2:91022212-91022231 | None:intergenic | 20.0% |
| !!! | TTTCGGAGTAATTATTTTTT+TGG | - | chr3_2:91022303-91022322 | Msa0437060:intron | 20.0% |
| !!! | CTTTAGAACAAAAAATACTA+TGG | + | chr3_2:91022495-91022514 | None:intergenic | 20.0% |
| !! | CATATATTAGAATCAAAGAT+TGG | - | chr3_2:91022532-91022551 | Msa0437060:CDS | 20.0% |
| !! | TGCTACTATTAAACAAAAAA+TGG | + | chr3_2:91022562-91022581 | None:intergenic | 20.0% |
| !! | AATTGAATTAACTCTTATGT+AGG | - | chr3_2:91022946-91022965 | Msa0437060:intron | 20.0% |
| !! | ATCCATATATAAAAGGTAAT+AGG | + | chr3_2:91023192-91023211 | None:intergenic | 20.0% |
| !! | TACACCTATTTATATTCAAA+TGG | + | chr3_2:91023312-91023331 | None:intergenic | 20.0% |
| !!! | AATTTTTTTGCACATGTTAA+AGG | + | chr3_2:91023567-91023586 | None:intergenic | 20.0% |
| !!! | ACACATAAACATGTTTTAAT+CGG | - | chr3_2:91023600-91023619 | Msa0437060:intron | 20.0% |
| !!! | AAATTGTGTTGATAGTATAT+AGG | - | chr3_2:91024157-91024176 | Msa0437060:intron | 20.0% |
| !! | TCCATATCATATAATATATG+TGG | - | chr3_2:91024192-91024211 | Msa0437060:intron | 20.0% |
| !! | ACCACATATATTATATGATA+TGG | + | chr3_2:91024196-91024215 | None:intergenic | 20.0% |
| !!! | AATTTGGAATCATTATTCAT+AGG | + | chr3_2:91024581-91024600 | None:intergenic | 20.0% |
| !! | ACTAAAAAACAATAACTTGA+AGG | - | chr3_2:91024751-91024770 | Msa0437060:intron | 20.0% |
| !! | TGAATTCATGTATAAAATGT+TGG | - | chr3_2:91025109-91025128 | Msa0437060:CDS | 20.0% |
| ! | AATAGAGTCAAAAAAATCCA+AGG | - | chr3_2:91021829-91021848 | Msa0437060:CDS | 25.0% |
| ! | CAAATCATAAAACAAAGTGT+TGG | + | chr3_2:91022213-91022232 | None:intergenic | 25.0% |
| ! | GAATAGTGAATCCTTAATTT+CGG | - | chr3_2:91022256-91022275 | Msa0437060:intron | 25.0% |
| ! | CTTCAAAAAATAGGTATGAT+GGG | + | chr3_2:91022801-91022820 | None:intergenic | 25.0% |
| ! | ACTTCAAAAAATAGGTATGA+TGG | + | chr3_2:91022802-91022821 | None:intergenic | 25.0% |
| !! | CACATGTTACTTCAAAAAAT+AGG | + | chr3_2:91022810-91022829 | None:intergenic | 25.0% |
| !!! | CTATTTTTTGAAGTAACATG+TGG | - | chr3_2:91022808-91022827 | Msa0437060:CDS | 25.0% |
| ! | ATGTTTAGCTAAAATAAGCT+AGG | + | chr3_2:91022864-91022883 | None:intergenic | 25.0% |
| ! | AAAGTCACCAAATGAAAATT+CGG | - | chr3_2:91022998-91023017 | Msa0437060:intron | 25.0% |
| ! | AAAATTCGGACTTGAAAAAT+TGG | - | chr3_2:91023012-91023031 | Msa0437060:intron | 25.0% |
| ! | ATAAAATACTACAGACAAAG+TGG | + | chr3_2:91023144-91023163 | None:intergenic | 25.0% |
| ! | CATATATAAAAGGTAATAGG+TGG | + | chr3_2:91023189-91023208 | None:intergenic | 25.0% |
| !! | CACCTATTACCTTTTATATA+TGG | - | chr3_2:91023187-91023206 | Msa0437060:CDS | 25.0% |
| ! | ACCTATTTATATTCAAATGG+TGG | + | chr3_2:91023309-91023328 | None:intergenic | 25.0% |
| !! | GCAAATACTTTATGCAATTT+TGG | - | chr3_2:91023380-91023399 | Msa0437060:CDS | 25.0% |
| ! | ATATCTTAATGCTCTTACTT+AGG | + | chr3_2:91023536-91023555 | None:intergenic | 25.0% |
| !!! | AAGAGCATTAAGATATTTGA+AGG | - | chr3_2:91023540-91023559 | Msa0437060:intron | 25.0% |
| !!! | AGTCAAAAAGTACTCTAATT+TGG | + | chr3_2:91023746-91023765 | None:intergenic | 25.0% |
| !!! | ATTAGAGTACTTTTTGACTT+TGG | - | chr3_2:91023747-91023766 | Msa0437060:intron | 25.0% |
| !!! | TTCATTGTTTGTTGTGTTTA+GGG | + | chr3_2:91023927-91023946 | None:intergenic | 25.0% |
| !!! | TTTCATTGTTTGTTGTGTTT+AGG | + | chr3_2:91023928-91023947 | None:intergenic | 25.0% |
| ! | ATGTCCTATACTATTGTATA+TGG | - | chr3_2:91024227-91024246 | Msa0437060:CDS | 25.0% |
| ! | TGTCCTATACTATTGTATAT+GGG | - | chr3_2:91024228-91024247 | Msa0437060:CDS | 25.0% |
| ! | TTCATCAAGTATTTGTAAGT+AGG | + | chr3_2:91024863-91024882 | None:intergenic | 25.0% |
| ! | TTATAAAAATCATACCAAGC+AGG | + | chr3_2:91024938-91024957 | None:intergenic | 25.0% |
| !!! | GAATTTGTGAATGGTTTTAA+GGG | + | chr3_2:91025318-91025337 | None:intergenic | 25.0% |
| !!! | AGAATTTGTGAATGGTTTTA+AGG | + | chr3_2:91025319-91025338 | None:intergenic | 25.0% |
| CAATTCTTCACAGCTAATTT+CGG | + | chr3_2:91021958-91021977 | None:intergenic | 30.0% | |
| !! | TTGGTTTTCATCATTGAGTT+TGG | - | chr3_2:91022063-91022082 | Msa0437060:CDS | 30.0% |
| ! | TTCAAGTCCGAATTTTCATT+TGG | + | chr3_2:91023008-91023027 | None:intergenic | 30.0% |
| CAGCTGACATATATGTTATT+GGG | - | chr3_2:91023051-91023070 | Msa0437060:intron | 30.0% | |
| TATCATCTATGTCTCCTATT+TGG | - | chr3_2:91023111-91023130 | Msa0437060:intron | 30.0% | |
| ! | AACATCTGTCTTGATGATTA+TGG | - | chr3_2:91023255-91023274 | Msa0437060:CDS | 30.0% |
| GCCACCATTTGAATATAAAT+AGG | - | chr3_2:91023305-91023324 | Msa0437060:CDS | 30.0% | |
| TAAACTTGTGTTATCAAGCT+CGG | + | chr3_2:91023510-91023529 | None:intergenic | 30.0% | |
| !! | ATAAGAAGTTGGTAACTGTA+TGG | + | chr3_2:91023703-91023722 | None:intergenic | 30.0% |
| CATTTAGTGGTACAATTTCT+TGG | + | chr3_2:91023838-91023857 | None:intergenic | 30.0% | |
| AAATTGTACCACTAAATGCT+GGG | - | chr3_2:91023840-91023859 | Msa0437060:intron | 30.0% | |
| !!! | TAAAGCGTTGCTTTTGATTT+GGG | + | chr3_2:91023952-91023971 | None:intergenic | 30.0% |
| ACTAACATGGTTTCGATAAT+CGG | + | chr3_2:91024029-91024048 | None:intergenic | 30.0% | |
| ACACTTTCAATTGACTAACA+TGG | + | chr3_2:91024042-91024061 | None:intergenic | 30.0% | |
| !! | TTAGTCAATTGAAAGTGTCT+CGG | - | chr3_2:91024044-91024063 | Msa0437060:intron | 30.0% |
| ! | TATAACGAACCTTATTTCCA+AGG | + | chr3_2:91024093-91024112 | None:intergenic | 30.0% |
| GTCCTATACTATTGTATATG+GGG | - | chr3_2:91024229-91024248 | Msa0437060:CDS | 30.0% | |
| TCCTATACTATTGTATATGG+GGG | - | chr3_2:91024230-91024249 | Msa0437060:CDS | 30.0% | |
| ! | TATTGCTTCAGATTTTGCTA+TGG | - | chr3_2:91024280-91024299 | Msa0437060:CDS | 30.0% |
| AATTTGTGTTGTATGCTAAC+AGG | - | chr3_2:91024383-91024402 | Msa0437060:intron | 30.0% | |
| ATTTGTGTTGTATGCTAACA+GGG | - | chr3_2:91024384-91024403 | Msa0437060:intron | 30.0% | |
| ACATGTGCAGTAACATTATT+TGG | - | chr3_2:91024675-91024694 | Msa0437060:intron | 30.0% | |
| TGCAGTAACATTATTTGGTT+GGG | - | chr3_2:91024680-91024699 | Msa0437060:intron | 30.0% | |
| TACTAGAAAAAGATCAGCTA+AGG | - | chr3_2:91024777-91024796 | Msa0437060:intron | 30.0% | |
| CATAATGTGAATATTCGCAA+TGG | + | chr3_2:91024996-91025015 | None:intergenic | 30.0% | |
| ATGTGACACTTAATATGTGA+CGG | - | chr3_2:91025026-91025045 | Msa0437060:intron | 30.0% | |
| ! | AATGTTGGTTGAAATGAAAC+AGG | - | chr3_2:91025124-91025143 | Msa0437060:CDS | 30.0% |
| TGTGATAGAATTCTATGGAA+AGG | - | chr3_2:91025147-91025166 | Msa0437060:intron | 30.0% | |
| AATCAGAAAATGTACGTTAG+AGG | - | chr3_2:91025180-91025199 | Msa0437060:intron | 30.0% | |
| AATGTAGCAGAATTTGTGAA+TGG | + | chr3_2:91025327-91025346 | None:intergenic | 30.0% | |
| ! | TTAATTTTGTGCTGCAGTCA+TGG | - | chr3_2:91021932-91021951 | Msa0437060:CDS | 35.0% |
| CGAAATTAGCTGTGAAGAAT+TGG | - | chr3_2:91021956-91021975 | Msa0437060:CDS | 35.0% | |
| ACCTCAGATTATTCTGTTAC+AGG | - | chr3_2:91022009-91022028 | Msa0437060:CDS | 35.0% | |
| ACCTGTAACAGAATAATCTG+AGG | + | chr3_2:91022013-91022032 | None:intergenic | 35.0% | |
| CAGAAAATTTATCTGGTACG+AGG | + | chr3_2:91022181-91022200 | None:intergenic | 35.0% | |
| ! | CTCGTACCAGATAAATTTTC+TGG | - | chr3_2:91022179-91022198 | Msa0437060:intron | 35.0% |
| ! | TATGCTTGGATCTAGTGTTT+TGG | - | chr3_2:91022280-91022299 | Msa0437060:intron | 35.0% |
| !!! | TGGATCTAGTGTTTTGGTTT+CGG | - | chr3_2:91022286-91022305 | Msa0437060:intron | 35.0% |
| ! | TAGAGTGCTAAGCTTGTATT+TGG | - | chr3_2:91022349-91022368 | Msa0437060:CDS | 35.0% |
| !!! | TTGGTCCTTGTTTTCAAAGA+AGG | - | chr3_2:91022679-91022698 | Msa0437060:intron | 35.0% |
| !!! | TGGTCCTTGTTTTCAAAGAA+GGG | - | chr3_2:91022680-91022699 | Msa0437060:intron | 35.0% |
| ! | TGGTTGAAGCATTCTACAAA+TGG | - | chr3_2:91022703-91022722 | Msa0437060:intron | 35.0% |
| ! | AGAGGATTAGTGATGAATGA+AGG | + | chr3_2:91022760-91022779 | None:intergenic | 35.0% |
| ACTCTTATGTAGGATGTTTG+TGG | - | chr3_2:91022956-91022975 | Msa0437060:intron | 35.0% | |
| CTCTTATGTAGGATGTTTGT+GGG | - | chr3_2:91022957-91022976 | Msa0437060:intron | 35.0% | |
| TCTTATGTAGGATGTTTGTG+GGG | - | chr3_2:91022958-91022977 | Msa0437060:intron | 35.0% | |
| CCAATAACATATATGTCAGC+TGG | + | chr3_2:91023053-91023072 | None:intergenic | 35.0% | |
| CCAGCTGACATATATGTTAT+TGG | - | chr3_2:91023050-91023069 | Msa0437060:intron | 35.0% | |
| AAAGTGGTAGATAGCCAAAT+AGG | + | chr3_2:91023128-91023147 | None:intergenic | 35.0% | |
| TGATTATGGCTTATCTACGA+CGG | - | chr3_2:91023269-91023288 | Msa0437060:CDS | 35.0% | |
| AAACTTGTGTTATCAAGCTC+GGG | + | chr3_2:91023509-91023528 | None:intergenic | 35.0% | |
| !!! | AGAGTACTTTTTGACTTTGG+AGG | - | chr3_2:91023750-91023769 | Msa0437060:intron | 35.0% |
| GAAATTGTACCACTAAATGC+TGG | - | chr3_2:91023839-91023858 | Msa0437060:intron | 35.0% | |
| ! | GTTTAGGGCTTGATGAATAA+GGG | + | chr3_2:91023912-91023931 | None:intergenic | 35.0% |
| ! | TGTTTAGGGCTTGATGAATA+AGG | + | chr3_2:91023913-91023932 | None:intergenic | 35.0% |
| !!! | CTAAAGCGTTGCTTTTGATT+TGG | + | chr3_2:91023953-91023972 | None:intergenic | 35.0% |
| !! | TAGTCAATTGAAAGTGTCTC+GGG | - | chr3_2:91024045-91024064 | Msa0437060:intron | 35.0% |
| ! | TCGTTATAAGTCAGACGTTT+TGG | - | chr3_2:91024105-91024124 | Msa0437060:intron | 35.0% |
| CCTATACTATTGTATATGGG+GGG | - | chr3_2:91024231-91024250 | Msa0437060:CDS | 35.0% | |
| GTGACATTTCAAGATGAAGT+AGG | - | chr3_2:91024307-91024326 | Msa0437060:intron | 35.0% | |
| ! | ACTAAATTTTCTCACTCCCT+TGG | - | chr3_2:91024534-91024553 | Msa0437060:CDS | 35.0% |
| GTGCAGTAACATTATTTGGT+TGG | - | chr3_2:91024679-91024698 | Msa0437060:intron | 35.0% | |
| GCAGTAACATTATTTGGTTG+GGG | - | chr3_2:91024681-91024700 | Msa0437060:intron | 35.0% | |
| CAGTAACATTATTTGGTTGG+GGG | - | chr3_2:91024682-91024701 | Msa0437060:intron | 35.0% | |
| ATGAATTTCATCGTAACCAG+CGG | + | chr3_2:91024726-91024745 | None:intergenic | 35.0% | |
| AGAAAAAGATCAGCTAAGGA+TGG | - | chr3_2:91024781-91024800 | Msa0437060:intron | 35.0% | |
| AATGCTGGTCGAATATTTGA+AGG | - | chr3_2:91024809-91024828 | Msa0437060:intron | 35.0% | |
| ATATTTGAAGGTTGGAACGA+AGG | - | chr3_2:91024821-91024840 | Msa0437060:intron | 35.0% | |
| TGCAAGTTTGAGCAACATAT+TGG | + | chr3_2:91024892-91024911 | None:intergenic | 35.0% | |
| TGCTCAAACTTGCAAATCAA+AGG | - | chr3_2:91024898-91024917 | Msa0437060:intron | 35.0% | |
| ACAGGTGTGATAGAATTCTA+TGG | - | chr3_2:91025142-91025161 | Msa0437060:intron | 35.0% | |
| AGAATTCTATGGAAAGGAGA+AGG | - | chr3_2:91025153-91025172 | Msa0437060:intron | 35.0% | |
| AGTCAAAATTCTCTGACCAT+AGG | - | chr3_2:91025205-91025224 | Msa0437060:intron | 35.0% | |
| !!! | GTTTTAAGGGACAAGATCTT+GGG | + | chr3_2:91025305-91025324 | None:intergenic | 35.0% |
| TCCTTAATTTCGGCTATGCT+TGG | - | chr3_2:91022266-91022285 | Msa0437060:intron | 40.0% | |
| TCCAAGCATAGCCGAAATTA+AGG | + | chr3_2:91022270-91022289 | None:intergenic | 40.0% | |
| !!! | TCCTTGTTTTCAAAGAAGGG+TGG | - | chr3_2:91022683-91022702 | Msa0437060:intron | 40.0% |
| ! | ACCACCCTTCTTTGAAAACA+AGG | + | chr3_2:91022687-91022706 | None:intergenic | 40.0% |
| TACAAATGGCGTGAAACGTT+CGG | - | chr3_2:91022717-91022736 | Msa0437060:CDS | 40.0% | |
| TCACTAATCCTCTCAACCTT+AGG | - | chr3_2:91022767-91022786 | Msa0437060:CDS | 40.0% | |
| AGCATTTACCTAAGGTTGAG+AGG | + | chr3_2:91022778-91022797 | None:intergenic | 40.0% | |
| !! | ATGATGGGAGCATTTACCTA+AGG | + | chr3_2:91022786-91022805 | None:intergenic | 40.0% |
| !! | AAGGTAATAGGTGGACTAAG+TGG | + | chr3_2:91023180-91023199 | None:intergenic | 40.0% |
| ! | TGGCTTGTCTTTGATCTCTT+AGG | - | chr3_2:91023810-91023829 | Msa0437060:intron | 40.0% |
| GTAGCAAACAAGCAAATGGT+TGG | - | chr3_2:91023977-91023996 | Msa0437060:intron | 40.0% | |
| ! | TTGGTATTTTCTTGTGCGTG+TGG | - | chr3_2:91023996-91024015 | Msa0437060:intron | 40.0% |
| ! | TGGTATTTTCTTGTGCGTGT+GGG | - | chr3_2:91023997-91024016 | Msa0437060:intron | 40.0% |
| CCCCCCATATACAATAGTAT+AGG | + | chr3_2:91024234-91024253 | None:intergenic | 40.0% | |
| GTATATGGGGGGCTATAAAA+TGG | - | chr3_2:91024242-91024261 | Msa0437060:CDS | 40.0% | |
| GATGAAGTAGGACTATGTAC+TGG | - | chr3_2:91024319-91024338 | Msa0437060:intron | 40.0% | |
| AAACGAAGCAGAATGTGGTT+TGG | + | chr3_2:91024437-91024456 | None:intergenic | 40.0% | |
| CTCATGTTCTAGTATGCCAA+GGG | + | chr3_2:91024553-91024572 | None:intergenic | 40.0% | |
| ACTCATGTTCTAGTATGCCA+AGG | + | chr3_2:91024554-91024573 | None:intergenic | 40.0% | |
| CTGGTCGAATATTTGAAGGT+TGG | - | chr3_2:91024813-91024832 | Msa0437060:intron | 40.0% | |
| ! | ATAGAGAATACACTGGCCTA+TGG | + | chr3_2:91025224-91025243 | None:intergenic | 40.0% |
| GCTGTGAATAGAGAATACAC+TGG | + | chr3_2:91025231-91025250 | None:intergenic | 40.0% | |
| !!! | GGTTTTAAGGGACAAGATCT+TGG | + | chr3_2:91025306-91025325 | None:intergenic | 40.0% |
| ! | AACTCGTGTTACTAGCAACA+AGG | - | chr3_2:91025391-91025410 | Msa0437060:intron | 40.0% |
| GCAAGAGAATGTGCATACCT+TGG | + | chr3_2:91021849-91021868 | None:intergenic | 45.0% | |
| AATCTTTGTGGGACTCACTC+AGG | - | chr3_2:91022107-91022126 | Msa0437060:CDS | 45.0% | |
| ATCTTTGTGGGACTCACTCA+GGG | - | chr3_2:91022108-91022127 | Msa0437060:CDS | 45.0% | |
| GTACGAGGATGTAGCTATCT+TGG | + | chr3_2:91022166-91022185 | None:intergenic | 45.0% | |
| TAAATGCTGGGAACGTGCTT+GGG | - | chr3_2:91023852-91023871 | Msa0437060:intron | 45.0% | |
| TCAAAAGCAACGCTTTAGCC+TGG | - | chr3_2:91023955-91023974 | Msa0437060:intron | 45.0% | |
| ! | CCATTTGCTTGTTTGCTACC+AGG | + | chr3_2:91023976-91023995 | None:intergenic | 45.0% |
| CCTGGTAGCAAACAAGCAAA+TGG | - | chr3_2:91023973-91023992 | Msa0437060:intron | 45.0% | |
| !! | CAATTGAAAGTGTCTCGGGT+TGG | - | chr3_2:91024049-91024068 | Msa0437060:intron | 45.0% |
| ! | CATGGGCTACCTTGGAAATA+AGG | - | chr3_2:91024081-91024100 | Msa0437060:intron | 45.0% |
| AGTGCAAACGAAGCAGAATG+TGG | + | chr3_2:91024442-91024461 | None:intergenic | 45.0% | |
| !! | TTGAATTATCGACTTGCCGC+TGG | - | chr3_2:91024707-91024726 | Msa0437060:intron | 45.0% |
| !!! | ATATTATTAACTTAAATTTT+AGG | + | chr3_2:91022838-91022857 | None:intergenic | 5.0% |
| !! | ATATTAAATAATTAGAAATT+TGG | + | chr3_2:91024597-91024616 | None:intergenic | 5.0% |
| TTTGTGGGGACGTGGAATGT+AGG | - | chr3_2:91022972-91022991 | Msa0437060:intron | 50.0% | |
| TTGTGGGGACGTGGAATGTA+GGG | - | chr3_2:91022973-91022992 | Msa0437060:intron | 50.0% | |
| AGCACGTTCCCAGCATTTAG+TGG | + | chr3_2:91023851-91023870 | None:intergenic | 50.0% | |
| CTAAATGCTGGGAACGTGCT+TGG | - | chr3_2:91023851-91023870 | Msa0437060:intron | 50.0% | |
| !! | GGACTATGTACTGGCTACAG+TGG | - | chr3_2:91024328-91024347 | Msa0437060:intron | 50.0% |
| CTGCTTCGTTTGCACTCACT+TGG | - | chr3_2:91024446-91024465 | Msa0437060:intron | 50.0% | |
| ! | TTGGCCTCTGGAGAGAAATG+TGG | - | chr3_2:91024465-91024484 | Msa0437060:intron | 50.0% |
| GTCACCACATTTCTCTCCAG+AGG | + | chr3_2:91024472-91024491 | None:intergenic | 50.0% | |
| TGACGAGTTGCGTCGAAACT+TGG | - | chr3_2:91024488-91024507 | Msa0437060:CDS | 50.0% | |
| CTAAGGATGGAGCAGAATGC+TGG | - | chr3_2:91024794-91024813 | Msa0437060:intron | 50.0% | |
| AAAAACGACGCACTCCTGCT+TGG | - | chr3_2:91024921-91024940 | Msa0437060:intron | 50.0% | |
| GGGACAAGATCTTGGGATAG+TGG | + | chr3_2:91025298-91025317 | None:intergenic | 50.0% | |
| GCTGCAGCACAACAAGTAGA+TGG | + | chr3_2:91025351-91025370 | None:intergenic | 50.0% | |
| GTAGGATGTTTGTGGGGACG+TGG | - | chr3_2:91022964-91022983 | Msa0437060:intron | 55.0% | |
| TGTGGGGACGTGGAATGTAG+GGG | - | chr3_2:91022974-91022993 | Msa0437060:intron | 55.0% | |
| GTGCTTGGGTCTGAGAACAG+TGG | - | chr3_2:91023866-91023885 | Msa0437060:intron | 55.0% | |
| !! | AAGGGCTAGCCACTTTGCTG+CGG | + | chr3_2:91023894-91023913 | None:intergenic | 55.0% |
| !! | AAAGTGTCTCGGGTTGGCAC+CGG | - | chr3_2:91024055-91024074 | Msa0437060:intron | 55.0% |
| TCCAAGGTAGCCCATGATGC+CGG | + | chr3_2:91024077-91024096 | None:intergenic | 55.0% | |
| GTTTGCACTCACTTGGCCTC+TGG | - | chr3_2:91024453-91024472 | Msa0437060:intron | 55.0% | |
| GCGTCGAAACTTGGACATCG+CGG | - | chr3_2:91024497-91024516 | Msa0437060:CDS | 55.0% | |
| !! | GGCGTGAAACGTTCGGTGCA+TGG | - | chr3_2:91022724-91022743 | Msa0437060:CDS | 60.0% |
| GTGGGGACGTGGAATGTAGG+GGG | - | chr3_2:91022975-91022994 | Msa0437060:intron | 60.0% | |
| !! | AGGGCTAGCCACTTTGCTGC+GGG | + | chr3_2:91023893-91023912 | None:intergenic | 60.0% |
| ! | ACCGGCATCATGGGCTACCT+TGG | - | chr3_2:91024073-91024092 | Msa0437060:intron | 60.0% |
| ACAGTGGCCCCGCAGCAAAG+TGG | - | chr3_2:91023882-91023901 | Msa0437060:intron | 65.0% | |
| !! | GGGCTAGCCACTTTGCTGCG+GGG | + | chr3_2:91023892-91023911 | None:intergenic | 65.0% |
| !! | TCGGGTTGGCACCGGCATCA+TGG | - | chr3_2:91024063-91024082 | Msa0437060:intron | 65.0% |
| !! | CGGGTTGGCACCGGCATCAT+GGG | - | chr3_2:91024064-91024083 | Msa0437060:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 91021824 | 91025452 | 91021824 | ID=Msa0437060;Name=Msa0437060 |
| chr3_2 | mRNA | 91021824 | 91025452 | 91021824 | ID=Msa0437060-mRNA-1;Parent=Msa0437060;Name=Msa0437060-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|9|0|459 |
| chr3_2 | exon | 91025426 | 91025452 | 91025426 | ID=Msa0437060-mRNA-1:exon:27200;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91025246 | 91025327 | 91025246 | ID=Msa0437060-mRNA-1:exon:27199;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91025076 | 91025147 | 91025076 | ID=Msa0437060-mRNA-1:exon:27198;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91024488 | 91024578 | 91024488 | ID=Msa0437060-mRNA-1:exon:27197;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91024204 | 91024308 | 91024204 | ID=Msa0437060-mRNA-1:exon:27196;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91023174 | 91023444 | 91023174 | ID=Msa0437060-mRNA-1:exon:27195;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91022705 | 91022871 | 91022705 | ID=Msa0437060-mRNA-1:exon:27194;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91022334 | 91022591 | 91022334 | ID=Msa0437060-mRNA-1:exon:27193;Parent=Msa0437060-mRNA-1 |
| chr3_2 | exon | 91021824 | 91022130 | 91021824 | ID=Msa0437060-mRNA-1:exon:27192;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91025426 | 91025452 | 91025426 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91025246 | 91025327 | 91025246 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91025076 | 91025147 | 91025076 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91024488 | 91024578 | 91024488 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91024204 | 91024308 | 91024204 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91023174 | 91023444 | 91023174 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91022705 | 91022871 | 91022705 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91022334 | 91022591 | 91022334 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| chr3_2 | CDS | 91021824 | 91022130 | 91021824 | ID=Msa0437060-mRNA-1:cds;Parent=Msa0437060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
