Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195460 | AES64280.1 | 92.248 | 129 | 9 | 1 | 1 | 128 | 1 | 129 | 3.68e-77 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195460 | G7IFK5 | 92.248 | 129 | 9 | 1 | 1 | 128 | 1 | 129 | 1.76e-77 | 234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0195460 | 0.806519 | 7.907150e-50 | -8.615850e-47 |
| Msa0011960 | Msa0195460 | 0.816307 | 5.917183e-52 | -8.615850e-47 |
| Msa0017510 | Msa0195460 | 0.823669 | 1.223288e-53 | -8.615850e-47 |
| Msa0025730 | Msa0195460 | 0.833216 | 6.056871e-56 | -8.615850e-47 |
| Msa0027260 | Msa0195460 | 0.828445 | 8.955751e-55 | -8.615850e-47 |
| Msa0032090 | Msa0195460 | 0.801255 | 9.814348e-49 | -8.615850e-47 |
| Msa0032260 | Msa0195460 | 0.803015 | 4.264332e-49 | -8.615850e-47 |
| Msa0032580 | Msa0195460 | 0.825725 | 4.007627e-54 | -8.615850e-47 |
| Msa0037700 | Msa0195460 | 0.822620 | 2.148520e-53 | -8.615850e-47 |
| Msa0040690 | Msa0195460 | 0.832950 | 7.056591e-56 | -8.615850e-47 |
| Msa0043660 | Msa0195460 | 0.804860 | 1.764072e-49 | -8.615850e-47 |
| Msa0044540 | Msa0195460 | -0.821415 | 4.088212e-53 | -8.615850e-47 |
| Msa0047160 | Msa0195460 | 0.812016 | 5.240915e-51 | -8.615850e-47 |
| Msa0051770 | Msa0195460 | 0.803530 | 3.335575e-49 | -8.615850e-47 |
| Msa0054440 | Msa0195460 | 0.813665 | 2.281980e-51 | -8.615850e-47 |
| Msa0054480 | Msa0195460 | 0.831809 | 1.352447e-55 | -8.615850e-47 |
| Msa0061080 | Msa0195460 | 0.805830 | 1.104457e-49 | -8.615850e-47 |
| Msa0074240 | Msa0195460 | 0.800138 | 1.658665e-48 | -8.615850e-47 |
| Msa0080200 | Msa0195460 | 0.802813 | 4.694902e-49 | -8.615850e-47 |
| Msa0081360 | Msa0195460 | 0.807960 | 3.915251e-50 | -8.615850e-47 |
| Msa0081480 | Msa0195460 | 0.802783 | 4.761971e-49 | -8.615850e-47 |
| Msa0090520 | Msa0195460 | 0.815105 | 1.096354e-51 | -8.615850e-47 |
| Msa0094470 | Msa0195460 | 0.828116 | 1.074994e-54 | -8.615850e-47 |
| Msa0100740 | Msa0195460 | 0.806204 | 9.215284e-50 | -8.615850e-47 |
| Msa0105620 | Msa0195460 | 0.802638 | 5.103112e-49 | -8.615850e-47 |
| Msa0127050 | Msa0195460 | 0.804936 | 1.700214e-49 | -8.615850e-47 |
| Msa0127310 | Msa0195460 | 0.800188 | 1.620062e-48 | -8.615850e-47 |
| Msa0128860 | Msa0195460 | 0.816750 | 4.708574e-52 | -8.615850e-47 |
| Msa0133130 | Msa0195460 | 0.824900 | 6.282345e-54 | -8.615850e-47 |
| Msa0136070 | Msa0195460 | 0.826841 | 2.174316e-54 | -8.615850e-47 |
| Msa0136100 | Msa0195460 | 0.809593 | 1.752654e-50 | -8.615850e-47 |
| Msa0137550 | Msa0195460 | 0.815034 | 1.136961e-51 | -8.615850e-47 |
| Msa0137990 | Msa0195460 | 0.813444 | 2.551964e-51 | -8.615850e-47 |
| Msa0140820 | Msa0195460 | 0.805765 | 1.139762e-49 | -8.615850e-47 |
| Msa0142660 | Msa0195460 | 0.974448 | 3.572494e-138 | -8.615850e-47 |
| Msa0147250 | Msa0195460 | 0.802497 | 5.456112e-49 | -8.615850e-47 |
| Msa0150820 | Msa0195460 | 0.833645 | 4.734369e-56 | -8.615850e-47 |
| Msa0157290 | Msa0195460 | 0.824076 | 9.817300e-54 | -8.615850e-47 |
| Msa0160550 | Msa0195460 | 0.813496 | 2.484935e-51 | -8.615850e-47 |
| Msa0165660 | Msa0195460 | 0.816793 | 4.604422e-52 | -8.615850e-47 |
| Msa0171410 | Msa0195460 | 0.810178 | 1.311799e-50 | -8.615850e-47 |
| Msa0172970 | Msa0195460 | 0.818419 | 1.979286e-52 | -8.615850e-47 |
| Msa0173990 | Msa0195460 | 0.833931 | 4.016985e-56 | -8.615850e-47 |
| Msa0174730 | Msa0195460 | 0.818007 | 2.453755e-52 | -8.615850e-47 |
| Msa0178590 | Msa0195460 | 0.800662 | 1.297619e-48 | -8.615850e-47 |
| Msa0183900 | Msa0195460 | 0.817059 | 4.013408e-52 | -8.615850e-47 |
| Msa0187120 | Msa0195460 | 0.821318 | 4.302508e-53 | -8.615850e-47 |
| Msa0187930 | Msa0195460 | 0.804192 | 2.430542e-49 | -8.615850e-47 |
| Msa0188680 | Msa0195460 | -0.800199 | 1.611747e-48 | -8.615850e-47 |
| Msa0189300 | Msa0195460 | 0.802152 | 6.425957e-49 | -8.615850e-47 |
| Msa0194540 | Msa0195460 | 0.811895 | 5.569276e-51 | -8.615850e-47 |
| Msa0195460 | Msa0197660 | 0.817940 | 2.540897e-52 | -8.615850e-47 |
| Msa0195460 | Msa0220720 | 0.846294 | 2.378097e-59 | -8.615850e-47 |
| Msa0195460 | Msa0222620 | 0.832267 | 1.042097e-55 | -8.615850e-47 |
| Msa0195460 | Msa0222890 | 0.804483 | 2.114155e-49 | -8.615850e-47 |
| Msa0195460 | Msa0228070 | 0.817859 | 2.650585e-52 | -8.615850e-47 |
| Msa0195460 | Msa0229380 | 0.817207 | 3.717440e-52 | -8.615850e-47 |
| Msa0195460 | Msa0231660 | 0.801642 | 8.179097e-49 | -8.615850e-47 |
| Msa0195460 | Msa0237260 | 0.963460 | 4.114316e-122 | -8.615850e-47 |
| Msa0195460 | Msa0239800 | 0.816021 | 6.855088e-52 | -8.615850e-47 |
| Msa0195460 | Msa0242410 | 0.800348 | 1.503424e-48 | -8.615850e-47 |
| Msa0195460 | Msa0255080 | 0.804891 | 1.737793e-49 | -8.615850e-47 |
| Msa0195460 | Msa0259370 | 0.802097 | 6.594446e-49 | -8.615850e-47 |
| Msa0195460 | Msa0260680 | 0.810223 | 1.282853e-50 | -8.615850e-47 |
| Msa0195460 | Msa0262310 | 0.832411 | 9.598165e-56 | -8.615850e-47 |
| Msa0195460 | Msa0264150 | 0.829890 | 3.995246e-55 | -8.615850e-47 |
| Msa0195460 | Msa0268130 | 0.808091 | 3.671405e-50 | -8.615850e-47 |
| Msa0195460 | Msa0270220 | -0.802893 | 4.520128e-49 | -8.615850e-47 |
| Msa0195460 | Msa0271530 | 0.824124 | 9.565899e-54 | -8.615850e-47 |
| Msa0195460 | Msa0279790 | 0.806450 | 8.178570e-50 | -8.615850e-47 |
| Msa0195460 | Msa0280090 | 0.825550 | 4.408619e-54 | -8.615850e-47 |
| Msa0195460 | Msa0280610 | 0.800975 | 1.119611e-48 | -8.615850e-47 |
| Msa0195460 | Msa0296740 | 0.800133 | 1.662986e-48 | -8.615850e-47 |
| Msa0195460 | Msa0298700 | 0.802576 | 5.255311e-49 | -8.615850e-47 |
| Msa0195460 | Msa0298990 | 0.802122 | 6.515270e-49 | -8.615850e-47 |
| Msa0195460 | Msa0299870 | 0.833297 | 5.781690e-56 | -8.615850e-47 |
| Msa0195460 | Msa0309750 | 0.811380 | 7.205664e-51 | -8.615850e-47 |
| Msa0195460 | Msa0309770 | 0.812025 | 5.217492e-51 | -8.615850e-47 |
| Msa0195460 | Msa0317510 | 0.820986 | 5.131246e-53 | -8.615850e-47 |
| Msa0195460 | Msa0318980 | 0.802044 | 6.761633e-49 | -8.615850e-47 |
| Msa0195460 | Msa0337240 | 0.813482 | 2.503655e-51 | -8.615850e-47 |
| Msa0195460 | Msa0337620 | 0.822509 | 2.280469e-53 | -8.615850e-47 |
| Msa0195460 | Msa0337650 | 0.812469 | 4.173181e-51 | -8.615850e-47 |
| Msa0195460 | Msa0339250 | 0.812364 | 4.399816e-51 | -8.615850e-47 |
| Msa0195460 | Msa0366890 | 0.810423 | 1.161025e-50 | -8.615850e-47 |
| Msa0195460 | Msa0385580 | 0.846651 | 1.899594e-59 | -8.615850e-47 |
| Msa0195460 | Msa0395820 | 0.803396 | 3.556571e-49 | -8.615850e-47 |
| Msa0195460 | Msa0398950 | 0.811668 | 6.239222e-51 | -8.615850e-47 |
| Msa0195460 | Msa0402650 | 0.812284 | 4.581617e-51 | -8.615850e-47 |
| Msa0195460 | Msa0419820 | 0.809425 | 1.904260e-50 | -8.615850e-47 |
| Msa0195460 | Msa0422400 | 0.800790 | 1.221904e-48 | -8.615850e-47 |
| Msa0195460 | Msa0428080 | 0.806286 | 8.856596e-50 | -8.615850e-47 |
| Msa0195460 | Msa0479660 | 0.826486 | 2.641726e-54 | -8.615850e-47 |
| Msa0195460 | Msa0481530 | 0.826508 | 2.610435e-54 | -8.615850e-47 |
| Msa0195460 | Msa0483860 | 0.803390 | 3.566597e-49 | -8.615850e-47 |
| Msa0195460 | Msa0503580 | 0.800688 | 1.281796e-48 | -8.615850e-47 |
| Msa0195460 | Msa0511310 | 0.803679 | 3.107594e-49 | -8.615850e-47 |
| Msa0195460 | Msa0529890 | 0.823910 | 1.074023e-53 | -8.615850e-47 |
| Msa0195460 | Msa0547360 | 0.817326 | 3.495534e-52 | -8.615850e-47 |
| Msa0195460 | Msa0547720 | 0.816941 | 4.264541e-52 | -8.615850e-47 |
| Msa0195460 | Msa0555450 | 0.815194 | 1.047707e-51 | -8.615850e-47 |
| Msa0195460 | Msa0557070 | 0.807551 | 4.784109e-50 | -8.615850e-47 |
| Msa0195460 | Msa0577500 | 0.804287 | 2.322522e-49 | -8.615850e-47 |
| Msa0195460 | Msa0585560 | 0.825535 | 4.445857e-54 | -8.615850e-47 |
| Msa0195460 | Msa0592440 | 0.800631 | 1.316125e-48 | -8.615850e-47 |
| Msa0195460 | Msa0601850 | 0.806124 | 9.577716e-50 | -8.615850e-47 |
| Msa0195460 | Msa0607050 | 0.827910 | 1.205092e-54 | -8.615850e-47 |
| Msa0195460 | Msa0610430 | 0.833531 | 5.055323e-56 | -8.615850e-47 |
| Msa0195460 | Msa0615440 | 0.814702 | 1.346432e-51 | -8.615850e-47 |
| Msa0195460 | Msa0625720 | 0.820579 | 6.367085e-53 | -8.615850e-47 |
| Msa0195460 | Msa0643180 | 0.802357 | 5.830660e-49 | -8.615850e-47 |
| Msa0195460 | Msa0643220 | 0.807038 | 6.144087e-50 | -8.615850e-47 |
| Msa0195460 | Msa0647500 | 0.812231 | 4.703993e-51 | -8.615850e-47 |
| Msa0195460 | Msa0649490 | 0.802997 | 4.301501e-49 | -8.615850e-47 |
| Msa0195460 | Msa0657970 | 0.804115 | 2.522550e-49 | -8.615850e-47 |
| Msa0195460 | Msa0661190 | -0.805433 | 1.338177e-49 | -8.615850e-47 |
| Msa0195460 | Msa0663390 | 0.830766 | 2.441163e-55 | -8.615850e-47 |
| Msa0195460 | Msa0682900 | 0.826813 | 2.207318e-54 | -8.615850e-47 |
| Msa0195460 | Msa0684500 | 0.817480 | 3.226575e-52 | -8.615850e-47 |
| Msa0195460 | Msa0689260 | 0.829963 | 3.835328e-55 | -8.615850e-47 |
| Msa0195460 | Msa0690150 | 0.817117 | 3.894344e-52 | -8.615850e-47 |
| Msa0195460 | Msa0691900 | 0.819569 | 1.084274e-52 | -8.615850e-47 |
| Msa0195460 | Msa0692830 | 0.805838 | 1.100206e-49 | -8.615850e-47 |
| Msa0195460 | Msa0698060 | 0.811443 | 6.984866e-51 | -8.615850e-47 |
| Msa0195460 | Msa0698490 | 0.820768 | 5.761849e-53 | -8.615850e-47 |
| Msa0195460 | Msa0698660 | 0.819597 | 1.068591e-52 | -8.615850e-47 |
| Msa0195460 | Msa0708520 | 0.805687 | 1.183681e-49 | -8.615850e-47 |
| Msa0195460 | Msa0709500 | 0.844593 | 6.868193e-59 | -8.615850e-47 |
| Msa0195460 | Msa0711780 | 0.820144 | 8.008456e-53 | -8.615850e-47 |
| Msa0195460 | Msa0715700 | 0.831081 | 2.042657e-55 | -8.615850e-47 |
| Msa0195460 | Msa0716840 | 0.806927 | 6.484808e-50 | -8.615850e-47 |
| Msa0195460 | Msa0720820 | 0.805010 | 1.641188e-49 | -8.615850e-47 |
| Msa0195460 | Msa0727710 | 0.802589 | 5.222452e-49 | -8.615850e-47 |
| Msa0195460 | Msa0743720 | 0.826308 | 2.913901e-54 | -8.615850e-47 |
| Msa0195460 | Msa0745790 | 0.808622 | 2.829785e-50 | -8.615850e-47 |
| Msa0195460 | Msa0750880 | 0.832186 | 1.091025e-55 | -8.615850e-47 |
| Msa0195460 | Msa0770200 | 0.800454 | 1.430235e-48 | -8.615850e-47 |
| Msa0195460 | Msa0790390 | -0.800833 | 1.197134e-48 | -8.615850e-47 |
| Msa0195460 | Msa0790660 | -0.850090 | 2.125271e-60 | -8.615850e-47 |
| Msa0195460 | Msa0790850 | 0.842772 | 2.107937e-58 | -8.615850e-47 |
| Msa0195460 | Msa0793800 | 0.838754 | 2.382881e-57 | -8.615850e-47 |
| Msa0195460 | Msa0794670 | 0.825402 | 4.780486e-54 | -8.615850e-47 |
| Msa0195460 | Msa0796530 | 0.832829 | 7.562741e-56 | -8.615850e-47 |
| Msa0195460 | Msa0808080 | 0.807999 | 3.841861e-50 | -8.615850e-47 |
| Msa0195460 | Msa0808270 | 0.819414 | 1.176110e-52 | -8.615850e-47 |
| Msa0195460 | Msa0812570 | 0.802445 | 5.591857e-49 | -8.615850e-47 |
| Msa0195460 | Msa0813720 | 0.810535 | 1.098188e-50 | -8.615850e-47 |
| Msa0195460 | Msa0813740 | 0.832352 | 9.928699e-56 | -8.615850e-47 |
| Msa0195460 | Msa0824680 | 0.801650 | 8.146093e-49 | -8.615850e-47 |
| Msa0195460 | Msa0827040 | 0.802581 | 5.243132e-49 | -8.615850e-47 |
| Msa0195460 | Msa0830540 | 0.801087 | 1.062553e-48 | -8.615850e-47 |
| Msa0195460 | Msa0841940 | 0.801046 | 1.083047e-48 | -8.615850e-47 |
| Msa0195460 | Msa0871270 | 0.811731 | 6.046972e-51 | -8.615850e-47 |
| Msa0195460 | Msa0876200 | 0.814353 | 1.608809e-51 | -8.615850e-47 |
| Msa0195460 | Msa0880140 | 0.821825 | 3.286266e-53 | -8.615850e-47 |
| Msa0195460 | Msa0902760 | 0.863500 | 2.381119e-64 | -8.615850e-47 |
| Msa0195460 | Msa0936340 | 0.804685 | 1.918656e-49 | -8.615850e-47 |
| Msa0195460 | Msa0938220 | 0.822986 | 1.765627e-53 | -8.615850e-47 |
| Msa0195460 | Msa0947660 | 0.801168 | 1.022411e-48 | -8.615850e-47 |
| Msa0195460 | Msa0959360 | 0.810971 | 8.840694e-51 | -8.615850e-47 |
| Msa0195460 | Msa0968590 | 0.824427 | 8.118226e-54 | -8.615850e-47 |
| Msa0195460 | Msa0970030 | 0.841350 | 5.010626e-58 | -8.615850e-47 |
| Msa0195460 | Msa0970420 | 0.830510 | 2.820656e-55 | -8.615850e-47 |
| Msa0195460 | Msa0974070 | 0.801656 | 8.122333e-49 | -8.615850e-47 |
| Msa0195460 | Msa0993290 | 0.808218 | 3.449714e-50 | -8.615850e-47 |
| Msa0195460 | Msa0993330 | 0.810443 | 1.149965e-50 | -8.615850e-47 |
| Msa0195460 | Msa0993600 | 0.802618 | 5.151712e-49 | -8.615850e-47 |
| Msa0195460 | Msa0999970 | 0.803990 | 2.677171e-49 | -8.615850e-47 |
| Msa0195460 | Msa1003030 | 0.803318 | 3.691957e-49 | -8.615850e-47 |
| Msa0195460 | Msa1003750 | 0.802317 | 5.941756e-49 | -8.615850e-47 |
| Msa0195460 | Msa1006840 | 0.846513 | 2.072616e-59 | -8.615850e-47 |
| Msa0195460 | Msa1013400 | 0.860762 | 1.647394e-63 | -8.615850e-47 |
| Msa0195460 | Msa1031930 | 0.804716 | 1.890141e-49 | -8.615850e-47 |
| Msa0195460 | Msa1040400 | 0.817398 | 3.366523e-52 | -8.615850e-47 |
| Msa0195460 | Msa1046020 | 0.804874 | 1.751475e-49 | -8.615850e-47 |
| Msa0195460 | Msa1046060 | 0.805841 | 1.098717e-49 | -8.615850e-47 |
| Msa0195460 | Msa1051200 | 0.821257 | 4.444527e-53 | -8.615850e-47 |
| Msa0195460 | Msa1051880 | 0.810208 | 1.292021e-50 | -8.615850e-47 |
| Msa0195460 | Msa1066490 | 0.825685 | 4.096751e-54 | -8.615850e-47 |
| Msa0195460 | Msa1073070 | -0.800990 | 1.111863e-48 | -8.615850e-47 |
| Msa0195460 | Msa1077030 | 0.811543 | 6.641777e-51 | -8.615850e-47 |
| Msa0195460 | Msa1081150 | 0.840607 | 7.854433e-58 | -8.615850e-47 |
| Msa0195460 | Msa1084470 | 0.817067 | 3.995859e-52 | -8.615850e-47 |
| Msa0195460 | Msa1087710 | 0.816718 | 4.785829e-52 | -8.615850e-47 |
| Msa0195460 | Msa1093530 | 0.864011 | 1.652027e-64 | -8.615850e-47 |
| Msa0195460 | Msa1093840 | 0.805825 | 1.107172e-49 | -8.615850e-47 |
| Msa0195460 | Msa1104140 | 0.835580 | 1.545259e-56 | -8.615850e-47 |
| Msa0195460 | Msa1106700 | 0.807601 | 4.668216e-50 | -8.615850e-47 |
| Msa0195460 | Msa1109680 | 0.802520 | 5.397080e-49 | -8.615850e-47 |
| Msa0195460 | Msa1121440 | 0.802924 | 4.453275e-49 | -8.615850e-47 |
| Msa0195460 | Msa1123380 | 0.805649 | 1.205595e-49 | -8.615850e-47 |
| Msa0195460 | Msa1125760 | 0.836235 | 1.053620e-56 | -8.615850e-47 |
| Msa0195460 | Msa1126510 | 0.805063 | 1.599382e-49 | -8.615850e-47 |
| Msa0195460 | Msa1131220 | 0.803682 | 3.102712e-49 | -8.615850e-47 |
| Msa0195460 | Msa1137700 | 0.803692 | 3.087181e-49 | -8.615850e-47 |
| Msa0195460 | Msa1147900 | 0.828611 | 8.167602e-55 | -8.615850e-47 |
| Msa0195460 | Msa1171360 | 0.846633 | 1.921807e-59 | -8.615850e-47 |
| Msa0195460 | Msa1193290 | 0.817670 | 2.923113e-52 | -8.615850e-47 |
| Msa0195460 | Msa1199220 | 0.802830 | 4.656878e-49 | -8.615850e-47 |
| Msa0195460 | Msa1207270 | 0.834316 | 3.216122e-56 | -8.615850e-47 |
| Msa0195460 | Msa1210020 | 0.822100 | 2.837393e-53 | -8.615850e-47 |
| Msa0195460 | Msa1214890 | 0.800926 | 1.146222e-48 | -8.615850e-47 |
| Msa0195460 | Msa1217470 | 0.804605 | 1.993615e-49 | -8.615850e-47 |
| Msa0195460 | Msa1218600 | 0.849892 | 2.414537e-60 | -8.615850e-47 |
| Msa0195460 | Msa1237940 | 0.818917 | 1.526481e-52 | -8.615850e-47 |
| Msa0195460 | Msa1251160 | 0.800299 | 1.538119e-48 | -8.615850e-47 |
| Msa0195460 | Msa1254730 | 0.805805 | 1.117693e-49 | -8.615850e-47 |
| Msa0195460 | Msa1255040 | -0.819800 | 9.602366e-53 | -8.615850e-47 |
| Msa0195460 | Msa1259490 | -0.815234 | 1.025998e-51 | -8.615850e-47 |
| Msa0195460 | Msa1265630 | 0.813274 | 2.780628e-51 | -8.615850e-47 |
| Msa0195460 | Msa1294820 | 0.815061 | 1.121046e-51 | -8.615850e-47 |
| Msa0195460 | Msa1295490 | -0.815946 | 7.123236e-52 | -8.615850e-47 |
| Msa0195460 | Msa1298510 | 0.809712 | 1.652377e-50 | -8.615850e-47 |
| Msa0195460 | Msa1299180 | -0.806420 | 8.296276e-50 | -8.615850e-47 |
| Msa0195460 | Msa1303250 | 0.803110 | 4.075976e-49 | -8.615850e-47 |
| Msa0195460 | Msa1305340 | 0.809754 | 1.618490e-50 | -8.615850e-47 |
| Msa0195460 | Msa1306840 | 0.802542 | 5.340652e-49 | -8.615850e-47 |
| Msa0195460 | Msa1331910 | 0.800012 | 1.759608e-48 | -8.615850e-47 |
| Msa0195460 | Msa1332040 | -0.813164 | 2.939563e-51 | -8.615850e-47 |
| Msa0195460 | Msa1336570 | 0.803821 | 2.902706e-49 | -8.615850e-47 |
| Msa0195460 | Msa1353060 | 0.828213 | 1.018942e-54 | -8.615850e-47 |
| Msa0195460 | Msa1353980 | 0.801951 | 7.064776e-49 | -8.615850e-47 |
| Msa0195460 | Msa1356440 | 0.839638 | 1.405510e-57 | -8.615850e-47 |
| Msa0195460 | Msa1358250 | 0.831998 | 1.214819e-55 | -8.615850e-47 |
| Msa0195460 | Msa1370070 | -0.800440 | 1.440061e-48 | -8.615850e-47 |
| Msa0195460 | Msa1374120 | 0.821137 | 4.736706e-53 | -8.615850e-47 |
| Msa0195460 | Msa1379760 | 0.812488 | 4.133528e-51 | -8.615850e-47 |
| Msa0195460 | Msa1385460 | 0.827748 | 1.318233e-54 | -8.615850e-47 |
| Msa0195460 | Msa1385670 | 0.807152 | 5.812349e-50 | -8.615850e-47 |
| Msa0195460 | Msa1386780 | 0.810806 | 9.596044e-51 | -8.615850e-47 |
| Msa0195460 | Msa1389800 | 0.806399 | 8.383365e-50 | -8.615850e-47 |
| Msa0195460 | Msa1392780 | 0.816308 | 5.912200e-52 | -8.615850e-47 |
| Msa0195460 | Msa1394290 | 0.840285 | 9.532100e-58 | -8.615850e-47 |
| Msa0195460 | Msa1423350 | 0.821745 | 3.428740e-53 | -8.615850e-47 |
| Msa0195460 | Msa1424750 | 0.833369 | 5.547228e-56 | -8.615850e-47 |
| Msa0195460 | Msa1432700 | 0.814731 | 1.327238e-51 | -8.615850e-47 |
| Msa0195460 | Msa1444310 | 0.824963 | 6.070504e-54 | -8.615850e-47 |
| Msa0195460 | Msa1451160 | 0.814573 | 1.438433e-51 | -8.615850e-47 |
| Msa0195460 | Msa1457920 | 0.846322 | 2.336404e-59 | -8.615850e-47 |
| Msa0195460 | Msa1466540 | 0.818761 | 1.655595e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195460 | MtrunA17_Chr2g0286621 | 92.248 | 129 | 9 | 1 | 1 | 128 | 1 | 129 | 3.38e-81 | 234 |
| Msa0195460 | MtrunA17_Chr2g0286631 | 80.435 | 138 | 17 | 3 | 1 | 128 | 1 | 138 | 1.77e-57 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAATGGTTAATGTTAATT+TGG | 0.155770 | 2_1:-12300526 | Msa0195460:CDS |
| GATTCTGAAGGTGACCTTAT+TGG | 0.270756 | 2_1:-12300780 | Msa0195460:CDS |
| AAGGAAGATGAGAATGATAA+AGG | 0.271877 | 2_1:-12300654 | Msa0195460:CDS |
| TCATAAAGAAATGAATGATA+TGG | 0.276443 | 2_1:-12300844 | None:intergenic |
| ATGTTGATGATAAACTATTT+TGG | 0.278652 | 2_1:-12300500 | Msa0195460:CDS |
| TACCCTGCTGCTAATTACTT+TGG | 0.359178 | 2_1:-12300744 | Msa0195460:CDS |
| TTCATCTTTGTTGCTTATTG+AGG | 0.383420 | 2_1:-12300811 | Msa0195460:CDS |
| ATAGAGTAAAGAAGCCAATA+AGG | 0.396823 | 2_1:+12300766 | None:intergenic |
| ACCCTGCTGCTAATTACTTT+GGG | 0.397321 | 2_1:-12300743 | Msa0195460:CDS |
| TGGGAGATATGTATGGAAGT+AGG | 0.434821 | 2_1:-12300480 | Msa0195460:CDS |
| GGGAGATATGTATGGAAGTA+GGG | 0.453186 | 2_1:-12300479 | Msa0195460:CDS |
| TGGTATGTGTAGCTTAGTTA+AGG | 0.466313 | 2_1:-12300673 | Msa0195460:CDS |
| AGGAAGATGAGAATGATAAA+GGG | 0.474639 | 2_1:-12300653 | Msa0195460:CDS |
| GATGAGAATGATAAAGGGTC+AGG | 0.478591 | 2_1:-12300648 | Msa0195460:CDS |
| TGCTAATTACTTTGGGCACA+AGG | 0.479009 | 2_1:-12300736 | Msa0195460:CDS |
| TGCCCAAAGTAATTAGCAGC+AGG | 0.488758 | 2_1:+12300741 | None:intergenic |
| TCCTCATCATCAACAAGTAA+AGG | 0.503410 | 2_1:+12300555 | None:intergenic |
| ACCTTTACTTGTTGATGATG+AGG | 0.506285 | 2_1:-12300556 | Msa0195460:CDS |
| ACCATCATTGTCACCCTCAC+AGG | 0.527345 | 2_1:+12300692 | None:intergenic |
| AGAAGAGCATTCTATTTCCA+TGG | 0.535708 | 2_1:+12300581 | None:intergenic |
| TGATGAGGAGGAAATAAGAA+TGG | 0.564678 | 2_1:-12300541 | Msa0195460:CDS |
| TTTACTTGTTGATGATGAGG+AGG | 0.584354 | 2_1:-12300553 | Msa0195460:CDS |
| GTGGTTATCAGATGCAACCA+TGG | 0.627194 | 2_1:-12300598 | Msa0195460:CDS |
| ACCTGTGAGGGTGACAATGA+TGG | 0.639274 | 2_1:-12300693 | Msa0195460:CDS |
| GAGGACAGTGCAGATTCTGA+AGG | 0.642136 | 2_1:-12300792 | Msa0195460:CDS |
| GCCCAAAGTAATTAGCAGCA+GGG | 0.657577 | 2_1:+12300742 | None:intergenic |
| GCTGAGTCATGTACCTGTGA+GGG | 0.671916 | 2_1:-12300705 | Msa0195460:CDS |
| TGCTGAGTCATGTACCTGTG+AGG | 0.698564 | 2_1:-12300706 | Msa0195460:CDS |
| GGTTGCATCTGATAACCACA+TGG | 0.727761 | 2_1:+12300602 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATGGTTAATGTTAATT+TGG | - | chr2_1:12300778-12300797 | Msa0195460:CDS | 20.0% |
| !!! | ATGTTGATGATAAACTATTT+TGG | - | chr2_1:12300804-12300823 | Msa0195460:CDS | 20.0% |
| !!! | TGTTGATGATAAACTATTTT+GGG | - | chr2_1:12300805-12300824 | Msa0195460:CDS | 20.0% |
| ! | TTCATCTTTGTTGCTTATTG+AGG | - | chr2_1:12300493-12300512 | Msa0195460:CDS | 30.0% |
| ATAGAGTAAAGAAGCCAATA+AGG | + | chr2_1:12300541-12300560 | None:intergenic | 30.0% | |
| AAGGAAGATGAGAATGATAA+AGG | - | chr2_1:12300650-12300669 | Msa0195460:CDS | 30.0% | |
| AGGAAGATGAGAATGATAAA+GGG | - | chr2_1:12300651-12300670 | Msa0195460:CDS | 30.0% | |
| !! | ACTATTTTGGGAGATATGTA+TGG | - | chr2_1:12300817-12300836 | Msa0195460:CDS | 30.0% |
| TGGTATGTGTAGCTTAGTTA+AGG | - | chr2_1:12300631-12300650 | Msa0195460:CDS | 35.0% | |
| !! | AGAAGAGCATTCTATTTCCA+TGG | + | chr2_1:12300726-12300745 | None:intergenic | 35.0% |
| !! | ACCTTTACTTGTTGATGATG+AGG | - | chr2_1:12300748-12300767 | Msa0195460:CDS | 35.0% |
| TCCTCATCATCAACAAGTAA+AGG | + | chr2_1:12300752-12300771 | None:intergenic | 35.0% | |
| !! | TTTACTTGTTGATGATGAGG+AGG | - | chr2_1:12300751-12300770 | Msa0195460:CDS | 35.0% |
| TGATGAGGAGGAAATAAGAA+TGG | - | chr2_1:12300763-12300782 | Msa0195460:CDS | 35.0% | |
| ! | GATTCTGAAGGTGACCTTAT+TGG | - | chr2_1:12300524-12300543 | Msa0195460:CDS | 40.0% |
| TACCCTGCTGCTAATTACTT+TGG | - | chr2_1:12300560-12300579 | Msa0195460:CDS | 40.0% | |
| ACCCTGCTGCTAATTACTTT+GGG | - | chr2_1:12300561-12300580 | Msa0195460:CDS | 40.0% | |
| TGCTAATTACTTTGGGCACA+AGG | - | chr2_1:12300568-12300587 | Msa0195460:CDS | 40.0% | |
| GATGAGAATGATAAAGGGTC+AGG | - | chr2_1:12300656-12300675 | Msa0195460:CDS | 40.0% | |
| TGGGAGATATGTATGGAAGT+AGG | - | chr2_1:12300824-12300843 | Msa0195460:CDS | 40.0% | |
| GGGAGATATGTATGGAAGTA+GGG | - | chr2_1:12300825-12300844 | Msa0195460:CDS | 40.0% | |
| GCCCAAAGTAATTAGCAGCA+GGG | + | chr2_1:12300565-12300584 | None:intergenic | 45.0% | |
| TGCCCAAAGTAATTAGCAGC+AGG | + | chr2_1:12300566-12300585 | None:intergenic | 45.0% | |
| !!! | GCTGTTTTAGCTCTACCATG+TGG | - | chr2_1:12300687-12300706 | Msa0195460:CDS | 45.0% |
| GGTTGCATCTGATAACCACA+TGG | + | chr2_1:12300705-12300724 | None:intergenic | 45.0% | |
| GTGGTTATCAGATGCAACCA+TGG | - | chr2_1:12300706-12300725 | Msa0195460:CDS | 45.0% | |
| GAGGACAGTGCAGATTCTGA+AGG | - | chr2_1:12300512-12300531 | Msa0195460:CDS | 50.0% | |
| TGCTGAGTCATGTACCTGTG+AGG | - | chr2_1:12300598-12300617 | Msa0195460:CDS | 50.0% | |
| GCTGAGTCATGTACCTGTGA+GGG | - | chr2_1:12300599-12300618 | Msa0195460:CDS | 50.0% | |
| ACCTGTGAGGGTGACAATGA+TGG | - | chr2_1:12300611-12300630 | Msa0195460:CDS | 50.0% | |
| ACCATCATTGTCACCCTCAC+AGG | + | chr2_1:12300615-12300634 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 12300470 | 12300856 | 12300470 | ID=Msa0195460;Name=Msa0195460 |
| chr2_1 | mRNA | 12300470 | 12300856 | 12300470 | ID=Msa0195460-mRNA-1;Parent=Msa0195460;Name=Msa0195460-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|128 |
| chr2_1 | exon | 12300470 | 12300856 | 12300470 | ID=Msa0195460-mRNA-1:exon:5393;Parent=Msa0195460-mRNA-1 |
| chr2_1 | CDS | 12300470 | 12300856 | 12300470 | ID=Msa0195460-mRNA-1:cds;Parent=Msa0195460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
