AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1321740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1321740 MtrunA17_Chr8g0353541 94.309 123 7 0 3 125 958 1080 4.28e-77 246
Msa1321740 MtrunA17_Chr8g0353781 95.122 123 6 0 3 125 1341 1463 1.20e-76 246
Msa1321740 MtrunA17_Chr8g0341751 93.496 123 8 0 3 125 1174 1296 3.08e-76 244
Msa1321740 MtrunA17_Chr6g0484351 84.553 123 19 0 3 125 542 664 2.32e-71 225
Msa1321740 MtrunA17_Chr8g0341761 94.690 113 6 0 3 115 1335 1447 9.11e-70 226
Msa1321740 MtrunA17_Chr8g0341801 90.909 110 10 0 6 115 320 429 1.35e-68 212
Msa1321740 MtrunA17_Chr8g0341811 92.857 112 8 0 3 114 1162 1273 4.61e-68 221
Msa1321740 MtrunA17_Chr8g0341851 89.655 116 11 1 3 117 1350 1465 1.06e-64 212
Msa1321740 MtrunA17_Chr6g0463391 68.807 109 33 1 3 110 543 651 2.10e-47 160
Msa1321740 MtrunA17_Chr6g0463211 69.725 109 32 1 3 110 1429 1537 2.51e-47 162
Msa1321740 MtrunA17_Chr6g0463151 66.964 112 36 1 3 113 1176 1287 8.62e-47 160
Msa1321740 MtrunA17_Chr6g0463141 64.655 116 40 1 3 117 1383 1498 4.78e-46 158
Msa1321740 MtrunA17_Chr6g0463131 67.890 109 34 1 3 110 1359 1467 9.89e-46 157
Msa1321740 MtrunA17_Chr1g0202221 67.890 109 34 1 3 110 1265 1373 1.23e-45 157
Msa1321740 MtrunA17_Chr6g0463201 66.972 109 35 1 3 110 1363 1471 1.52e-45 157
Msa1321740 MtrunA17_Chr8g0359291 66.055 109 36 1 3 110 540 648 4.17e-45 154
Msa1321740 MtrunA17_Chr6g0463121 65.138 109 37 1 3 110 1358 1466 4.76e-45 155
Msa1321740 MtrunA17_Chr6g0471281 66.972 109 35 1 3 110 1359 1467 6.49e-45 155
Msa1321740 MtrunA17_Chr6g0463181 66.972 109 35 1 3 110 1342 1450 2.89e-44 153
Msa1321740 MtrunA17_Chr3g0085281 66.355 107 35 1 3 108 1351 1457 3.57e-44 153
Msa1321740 MtrunA17_Chr5g0412941 60.000 115 45 1 3 116 215 329 4.77e-44 146
Msa1321740 MtrunA17_Chr6g0472531 66.355 107 35 1 3 108 1309 1415 2.19e-43 151
Msa1321740 MtrunA17_Chr8g0337121 60.976 123 45 2 3 124 1389 1509 5.78e-43 149
Msa1321740 MtrunA17_Chr8g0376961 61.017 118 40 2 3 114 1328 1445 1.01e-42 149
Msa1321740 MtrunA17_Chr8g0337191 60.163 123 46 2 3 124 1369 1489 1.32e-42 149
Msa1321740 MtrunA17_Chr3g0101481 58.974 117 47 1 3 118 1385 1501 2.81e-42 147
Msa1321740 MtrunA17_Chr3g0101461 61.682 107 40 1 3 108 1192 1298 4.46e-41 144
Msa1321740 MtrunA17_Chr3g0101441 61.682 107 40 1 3 108 1192 1298 4.73e-41 144
Msa1321740 MtrunA17_Chr5g0445741 59.130 115 46 1 3 116 1381 1495 9.39e-41 143
Msa1321740 MtrunA17_Chr3g0101471 60.748 107 41 1 3 108 1190 1296 1.35e-40 143
Msa1321740 MtrunA17_Chr1g0183191 58.824 119 46 2 3 120 1414 1530 1.75e-40 142
Msa1321740 MtrunA17_Chr5g0412721 62.617 107 39 1 3 108 1376 1482 2.52e-40 142
Msa1321740 MtrunA17_Chr7g0262191 59.829 117 44 2 3 118 1414 1528 2.60e-40 142
Msa1321740 MtrunA17_Chr5g0445701 54.545 121 48 2 3 116 126 246 5.14e-40 134
Msa1321740 MtrunA17_Chr2g0295901 58.491 106 44 0 3 108 1388 1493 5.20e-39 138
Msa1321740 MtrunA17_Chr2g0295921 57.547 106 45 0 3 108 1403 1508 5.96e-39 138
Msa1321740 MtrunA17_Chr2g0295911 57.547 106 45 0 3 108 1391 1496 8.78e-39 137
Msa1321740 MtrunA17_Chr8g0363771 55.660 106 47 0 3 108 1388 1493 5.28e-38 135
Msa1321740 MtrunA17_Chr1g0195691 56.604 106 46 0 3 108 1403 1508 7.27e-38 135
Msa1321740 MtrunA17_Chr5g0445671 60.194 103 40 1 3 104 990 1092 5.17e-37 132
Msa1321740 MtrunA17_Chr2g0285731 53.333 105 48 1 2 105 1366 1470 1.20e-26 103
Msa1321740 MtrunA17_Chr3g0080941 49.524 105 52 1 2 105 1364 1468 9.32e-26 100
Msa1321740 MtrunA17_Chr3g0080981 49.524 105 52 1 2 105 1363 1467 2.04e-25 99.8
Msa1321740 MtrunA17_Chr2g0333911 46.154 104 55 1 3 105 903 1006 1.34e-23 94.7
Msa1321740 MtrunA17_Chr1g0193991 38.462 104 63 1 3 105 521 624 6.95e-18 78.2
Msa1321740 MtrunA17_Chr1g0193991 27.928 111 80 0 3 113 1177 1287 1.55e-12 63.2
Msa1321740 MtrunA17_Chr1g0194031 36.538 104 65 1 3 105 516 619 5.51e-17 75.9
Msa1321740 MtrunA17_Chr8g0344651 35.577 104 67 0 2 105 729 832 1.17e-16 74.7
Msa1321740 MtrunA17_Chr8g0344651 32.292 96 65 0 2 97 1373 1468 3.66e-14 67.8
Msa1321740 MtrunA17_Chr3g0128391 35.922 103 66 0 2 104 446 548 1.88e-16 73.9
Msa1321740 MtrunA17_Chr6g0481921 38.000 100 61 1 7 105 407 506 3.48e-16 73.6
Msa1321740 MtrunA17_Chr6g0481921 32.381 105 70 1 3 106 1060 1164 7.04e-12 61.2
Msa1321740 MtrunA17_Chr2g0285311 37.000 100 62 1 7 105 505 604 4.58e-16 73.2
Msa1321740 MtrunA17_Chr2g0285311 32.727 110 73 1 3 111 1158 1267 8.64e-13 63.9
Msa1321740 MtrunA17_Chr3g0138211 35.577 104 66 1 3 105 528 631 7.31e-16 72.4
Msa1321740 MtrunA17_Chr3g0138211 30.088 113 79 0 3 115 1171 1283 1.45e-12 63.2
Msa1321740 MtrunA17_Chr2g0285191 35.000 100 64 1 7 105 534 633 1.20e-15 72.0
Msa1321740 MtrunA17_Chr2g0285191 32.727 110 73 1 3 111 1186 1295 2.01e-12 62.8
Msa1321740 MtrunA17_Chr6g0451911 35.000 100 65 0 2 101 492 591 4.02e-15 70.5
Msa1321740 MtrunA17_Chr6g0451911 34.021 97 64 0 4 100 1149 1245 2.70e-13 65.1
Msa1321740 MtrunA17_Chr4g0069411 34.615 104 67 1 3 105 528 631 4.52e-15 70.1
Msa1321740 MtrunA17_Chr4g0069411 30.000 110 77 0 3 112 1183 1292 6.62e-12 61.2
Msa1321740 MtrunA17_Chr2g0285301 33.333 105 69 1 3 106 496 600 1.23e-14 68.9
Msa1321740 MtrunA17_Chr2g0285301 32.727 110 73 1 3 111 1154 1263 4.47e-13 64.7
Msa1321740 MtrunA17_Chr7g0233901 31.429 105 71 1 2 105 488 592 1.26e-14 68.9
Msa1321740 MtrunA17_Chr7g0233901 35.484 93 60 0 4 96 1131 1223 3.70e-14 67.8
Msa1321740 MtrunA17_Chr4g0069351 35.577 104 66 1 3 105 510 613 1.30e-14 68.9
Msa1321740 MtrunA17_Chr4g0069351 31.481 108 74 0 3 110 1169 1276 2.12e-13 65.5
Msa1321740 MtrunA17_Chr4g0069401 33.654 104 68 1 3 105 505 608 1.50e-14 68.9
Msa1321740 MtrunA17_Chr4g0069401 31.193 109 75 0 3 111 1167 1275 1.36e-13 66.2
Msa1321740 MtrunA17_Chr5g0410921 36.190 105 66 1 2 105 1120 1224 1.70e-14 68.6
Msa1321740 MtrunA17_Chr5g0410921 29.167 120 85 0 2 121 487 606 4.97e-13 64.3
Msa1321740 MtrunA17_Chr6g0451881 34.286 105 68 1 2 105 492 596 1.84e-14 68.6
Msa1321740 MtrunA17_Chr6g0451881 31.897 116 74 1 4 119 1142 1252 2.19e-12 62.8
Msa1321740 MtrunA17_Chr4g0039821 36.538 104 65 1 3 105 508 611 2.07e-14 68.6
Msa1321740 MtrunA17_Chr4g0039821 30.275 109 76 0 3 111 1167 1275 7.15e-12 61.2
Msa1321740 MtrunA17_Chr1g0156821 36.275 102 64 1 6 106 506 607 2.87e-14 68.2
Msa1321740 MtrunA17_Chr1g0156821 37.255 102 64 0 2 103 1125 1226 3.42e-14 67.8
Msa1321740 MtrunA17_Chr4g0041871 34.343 99 65 0 2 100 474 572 4.67e-14 67.4
Msa1321740 MtrunA17_Chr4g0041871 36.559 93 59 0 4 96 1139 1231 2.78e-13 65.1
Msa1321740 MtrunA17_Chr3g0128381 37.838 111 60 3 3 104 522 632 4.82e-14 67.4
Msa1321740 MtrunA17_Chr8g0366471 33.019 106 70 1 1 105 17 122 7.97e-14 63.9
Msa1321740 MtrunA17_Chr8g0366481 33.019 106 70 1 2 106 517 622 9.20e-14 66.6
Msa1321740 MtrunA17_Chr3g0119381 35.238 105 67 1 3 106 531 635 9.40e-14 66.6
Msa1321740 MtrunA17_Chr3g0119381 30.097 103 72 0 3 105 1190 1292 9.26e-13 63.5
Msa1321740 MtrunA17_Chr4g0069361 33.654 104 68 1 3 105 510 613 1.17e-13 66.2
Msa1321740 MtrunA17_Chr4g0069361 31.193 109 75 0 3 111 1169 1277 1.75e-13 65.9
Msa1321740 MtrunA17_Chr6g0452171 32.000 100 68 0 2 101 492 591 1.85e-13 65.9
Msa1321740 MtrunA17_Chr6g0452171 34.021 97 64 0 4 100 1155 1251 1.91e-12 62.8
Msa1321740 MtrunA17_Chr6g0452061 32.075 106 71 1 1 105 12 117 1.91e-13 65.5
Msa1321740 MtrunA17_Chr6g0452061 32.990 97 65 0 4 100 664 760 2.18e-12 62.4
Msa1321740 MtrunA17_Chr6g0452041 32.000 100 68 0 2 101 492 591 5.38e-13 64.3
Msa1321740 MtrunA17_Chr6g0452041 31.897 116 74 1 4 119 1154 1264 2.39e-12 62.4
Msa1321740 MtrunA17_Chr6g0452111 32.000 100 68 0 2 101 499 598 5.64e-13 64.3
Msa1321740 MtrunA17_Chr6g0452111 34.021 97 64 0 4 100 1153 1249 2.39e-12 62.4
Msa1321740 MtrunA17_Chr4g0061601 31.481 108 74 0 3 110 520 627 7.33e-13 63.9
Msa1321740 MtrunA17_Chr6g0474071 30.392 102 71 0 3 104 347 448 8.68e-13 63.5
Msa1321740 MtrunA17_Chr6g0452141 33.333 105 69 1 2 105 493 597 1.24e-12 63.2
Msa1321740 MtrunA17_Chr6g0452141 34.021 97 64 0 4 100 1152 1248 2.51e-12 62.4
Msa1321740 MtrunA17_Chr3g0123411 31.818 110 70 1 4 113 1038 1142 2.80e-12 62.4
Msa1321740 MtrunA17_Chr3g0123411 31.313 99 68 0 2 100 380 478 4.82e-12 61.6
Msa1321740 MtrunA17_Chr6g0452071 34.021 97 64 0 4 100 348 444 5.08e-12 61.2
Msa1321740 MtrunA17_Chr6g0486841 29.808 104 72 1 2 104 490 593 5.99e-12 61.2
Msa1321740 MtrunA17_Chr6g0453051 29.808 104 73 0 2 105 494 597 6.42e-12 61.2
Msa1321740 MtrunA17_Chr6g0453051 32.692 104 69 1 3 105 1140 1243 6.80e-12 61.2
Msa1321740 MtrunA17_Chr5g0433071 34.314 102 67 0 3 104 598 699 6.77e-12 61.2
Msa1321740 MtrunA17_Chr1g0194001 31.915 94 64 0 3 96 280 373 6.84e-12 60.8
Msa1321740 MtrunA17_Chr1g0180601 31.132 106 71 1 2 105 530 635 2.70e-11 59.3
Msa1321740 MtrunA17_Chr5g0433051 33.333 102 68 0 3 104 596 697 2.76e-11 59.3
Msa1321740 MtrunA17_Chr7g0264631 30.189 106 72 1 2 105 557 662 2.95e-11 59.3
Msa1321740 MtrunA17_Chr7g0264631 31.183 93 64 0 3 95 1213 1305 4.65e-11 58.9
Msa1321740 MtrunA17_Chr1g0178481 29.032 93 66 0 2 94 512 604 5.94e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1321740 AT3G21250.6 83.051 118 20 0 3 120 929 1046 2.04e-63 208
Msa1321740 AT3G21250.3 83.051 118 20 0 3 120 929 1046 2.04e-63 208
Msa1321740 AT3G21250.2 83.051 118 20 0 3 120 1345 1462 3.53e-63 208
Msa1321740 AT3G21250.1 83.051 118 20 0 3 120 1334 1451 3.82e-63 207
Msa1321740 AT3G21250.4 83.051 118 20 0 3 120 1351 1468 3.97e-63 207
Msa1321740 AT3G21250.5 83.051 118 20 0 3 120 1340 1457 4.33e-63 207
Msa1321740 AT3G59140.1 68.807 109 33 1 3 110 1337 1445 1.37e-46 160
Msa1321740 AT3G13080.1 62.609 115 42 1 3 116 1399 1513 3.40e-43 150
Msa1321740 AT3G13080.2 62.609 115 42 1 3 116 1374 1488 3.53e-43 150
Msa1321740 AT3G13100.2 60.000 115 45 1 3 116 1126 1240 5.88e-42 147
Msa1321740 AT3G62700.1 61.321 106 41 0 3 108 1427 1532 6.30e-42 147
Msa1321740 AT3G13100.1 62.727 110 40 1 3 111 1371 1480 7.42e-42 147
Msa1321740 AT3G60160.1 61.207 116 42 2 3 117 1385 1498 1.43e-41 146
Msa1321740 AT3G60160.3 61.207 116 42 2 3 117 1349 1462 1.50e-41 146
Msa1321740 AT3G60970.1 61.207 116 42 2 3 117 932 1045 1.63e-41 146
Msa1321740 AT1G04120.1 59.664 119 45 2 3 120 1398 1514 3.40e-41 145
Msa1321740 AT1G04120.3 59.664 119 45 2 3 120 1363 1479 4.01e-41 145
Msa1321740 AT2G47800.1 59.434 106 43 0 3 108 1404 1509 4.13e-41 145
Msa1321740 AT3G13090.1 62.727 110 40 1 3 111 1349 1458 1.27e-40 143
Msa1321740 AT1G04120.2 59.829 117 44 2 5 120 1395 1509 1.79e-40 143
Msa1321740 AT3G13080.5 67.901 81 26 0 3 83 1399 1479 1.11e-33 124
Msa1321740 AT1G30420.1 54.286 105 47 1 2 105 1364 1468 5.58e-27 104
Msa1321740 AT1G30410.5 49.167 120 59 2 2 120 1249 1367 6.88e-27 104
Msa1321740 AT1G30410.2 49.167 120 59 2 2 120 1364 1482 8.39e-27 104
Msa1321740 AT1G30410.6 49.167 120 59 2 2 120 1364 1482 8.39e-27 104
Msa1321740 AT1G30410.4 49.167 120 59 2 2 120 1364 1482 8.39e-27 104
Msa1321740 AT1G30410.1 49.167 120 59 2 2 120 1367 1485 8.72e-27 103
Msa1321740 AT1G30400.2 46.400 125 65 2 2 125 1366 1489 8.07e-26 101
Msa1321740 AT1G30400.1 46.400 125 65 2 2 125 1366 1489 8.07e-26 101
Msa1321740 AT2G34660.3 52.381 105 49 1 2 105 1084 1188 1.30e-25 100
Msa1321740 AT2G34660.1 52.381 105 49 1 2 105 1371 1475 1.74e-25 100
Msa1321740 AT2G34660.2 52.381 105 49 1 2 105 1371 1475 1.74e-25 100
Msa1321740 AT2G07680.3 48.077 104 53 1 3 105 1319 1422 4.67e-24 96.3
Msa1321740 AT2G07680.5 48.077 104 53 1 3 105 1303 1406 4.86e-24 96.3
Msa1321740 AT2G07680.1 48.077 104 53 1 3 105 1297 1400 5.00e-24 96.3
Msa1321740 AT2G07680.6 48.077 104 53 1 3 105 1220 1323 5.03e-24 96.3
Msa1321740 AT2G07680.4 48.077 104 53 1 3 105 1294 1397 5.05e-24 96.3
Msa1321740 AT1G02520.1 37.500 104 64 1 3 105 513 616 4.48e-17 76.3
Msa1321740 AT1G02520.2 37.500 104 64 1 3 105 513 616 4.48e-17 76.3
Msa1321740 AT1G02520.3 37.500 104 64 1 3 105 513 616 4.48e-17 76.3
Msa1321740 AT1G02530.1 36.190 105 66 1 2 105 499 603 1.94e-16 74.7
Msa1321740 AT1G02530.2 36.190 105 66 1 2 105 499 603 2.33e-16 74.3
Msa1321740 AT3G62150.3 37.500 104 64 1 3 105 535 638 2.40e-16 74.3
Msa1321740 AT3G62150.3 28.829 111 78 1 3 112 1185 1295 2.43e-11 60.1
Msa1321740 AT3G62150.2 37.500 104 64 1 3 105 535 638 2.40e-16 74.3
Msa1321740 AT3G62150.2 28.829 111 78 1 3 112 1185 1295 2.43e-11 60.1
Msa1321740 AT3G62150.1 37.500 104 64 1 3 105 535 638 2.40e-16 74.3
Msa1321740 AT3G62150.1 28.829 111 78 1 3 112 1185 1295 2.43e-11 60.1
Msa1321740 AT2G47000.6 35.577 104 66 1 3 105 516 619 1.02e-15 72.4
Msa1321740 AT2G47000.6 28.829 111 78 1 3 112 1175 1285 4.06e-11 59.3
Msa1321740 AT2G47000.5 35.577 104 66 1 3 105 516 619 1.02e-15 72.4
Msa1321740 AT2G47000.5 28.829 111 78 1 3 112 1175 1285 4.06e-11 59.3
Msa1321740 AT2G47000.1 35.577 104 66 1 3 105 516 619 1.02e-15 72.4
Msa1321740 AT2G47000.1 28.829 111 78 1 3 112 1175 1285 4.06e-11 59.3
Msa1321740 AT2G47000.4 35.577 104 66 1 3 105 516 619 1.13e-15 72.4
Msa1321740 AT2G47000.3 35.577 104 66 1 3 105 516 619 1.15e-15 72.4
Msa1321740 AT2G47000.7 35.577 104 66 1 3 105 516 619 1.15e-15 72.4
Msa1321740 AT2G47000.2 35.577 104 66 1 3 105 516 619 1.15e-15 72.4
Msa1321740 AT4G01820.1 35.577 104 66 1 3 105 480 583 1.35e-15 72.0
Msa1321740 AT4G01820.1 29.091 110 77 1 3 111 1118 1227 5.85e-11 58.9
Msa1321740 AT4G25450.3 35.577 104 67 0 3 106 435 538 1.40e-15 72.0
Msa1321740 AT4G25450.1 35.577 104 67 0 3 106 604 707 1.48e-15 72.0
Msa1321740 AT4G01820.2 35.577 104 66 1 3 105 480 583 1.61e-15 72.0
Msa1321740 AT4G01830.2 35.577 104 66 1 3 105 251 354 4.37e-15 70.9
Msa1321740 AT4G01830.1 35.577 104 66 1 3 105 485 588 6.05e-15 70.5
Msa1321740 AT1G27940.2 34.615 104 68 0 2 105 288 391 1.65e-14 68.9
Msa1321740 AT1G27940.2 33.000 100 67 0 4 103 923 1022 6.09e-13 64.7
Msa1321740 AT1G10680.1 33.962 106 69 1 2 106 1113 1218 2.05e-14 68.9
Msa1321740 AT1G10680.1 30.579 121 82 2 2 120 492 612 2.53e-13 65.9
Msa1321740 AT1G27940.1 34.615 104 68 0 2 105 502 605 2.20e-14 68.6
Msa1321740 AT1G27940.1 32.353 102 69 0 2 103 1135 1236 7.78e-13 64.3
Msa1321740 AT5G46540.1 35.849 106 63 2 3 105 489 592 2.26e-14 68.6
Msa1321740 AT5G46540.1 33.333 105 69 1 3 106 1138 1242 5.87e-13 64.7
Msa1321740 AT3G28360.1 34.615 104 68 0 2 105 477 580 3.93e-14 68.2
Msa1321740 AT3G28360.1 34.783 92 60 0 4 95 1116 1207 4.49e-12 62.0
Msa1321740 AT4G18050.1 34.906 106 64 2 3 105 487 590 4.33e-14 67.8
Msa1321740 AT4G18050.1 30.000 110 76 1 3 111 1126 1235 1.11e-11 60.8
Msa1321740 AT4G18050.2 34.906 106 64 2 3 105 497 600 4.42e-14 67.8
Msa1321740 AT4G18050.2 30.000 110 76 1 3 111 1136 1245 1.17e-11 60.8
Msa1321740 AT1G28010.1 32.692 104 70 0 2 105 503 606 5.31e-14 67.8
Msa1321740 AT1G28010.1 34.314 102 67 0 2 103 1137 1238 3.87e-13 65.1
Msa1321740 AT3G28380.1 36.559 93 59 0 4 96 1130 1222 6.38e-14 67.4
Msa1321740 AT3G28380.1 31.132 106 72 1 2 106 490 595 2.39e-12 62.8
Msa1321740 AT4G25960.1 33.962 106 69 1 2 106 1161 1266 1.22e-13 66.6
Msa1321740 AT4G25960.1 30.894 123 81 3 2 122 532 652 3.91e-13 65.1
Msa1321740 AT1G10680.2 30.579 121 82 2 2 120 492 612 3.40e-13 65.5
Msa1321740 AT3G28860.1 30.769 104 72 0 2 105 496 599 4.07e-13 65.1
Msa1321740 AT3G28860.1 31.731 104 70 1 3 105 1142 1245 5.40e-12 62.0
Msa1321740 AT3G28345.1 33.333 105 69 1 2 105 490 594 7.20e-13 64.3
Msa1321740 AT3G28345.1 34.783 92 60 0 4 95 1130 1221 3.17e-12 62.4
Msa1321740 AT5G03910.1 33.696 92 61 0 3 94 529 620 1.35e-12 63.5
Msa1321740 AT4G28620.1 34.314 102 67 0 3 104 569 670 2.07e-12 63.2
Msa1321740 AT3G28390.1 29.268 123 81 1 2 124 478 594 4.53e-12 62.0
Msa1321740 AT3G28390.1 33.696 92 61 0 4 95 1115 1206 2.49e-11 60.1
Msa1321740 AT3G28415.2 31.429 105 71 1 2 105 477 581 5.29e-12 62.0
Msa1321740 AT3G28415.2 33.696 92 61 0 4 95 1119 1210 5.21e-11 58.9
Msa1321740 AT3G28415.1 31.429 105 71 1 2 105 469 573 5.45e-12 62.0
Msa1321740 AT3G28415.1 33.696 92 61 0 4 95 1111 1202 5.41e-11 58.9
Msa1321740 AT4G28630.1 34.314 102 67 0 3 104 567 668 6.42e-12 61.6
Msa1321740 AT5G58270.1 32.727 110 74 0 3 112 609 718 1.71e-11 60.5
Msa1321740 AT5G39040.1 32.039 103 70 0 3 105 529 631 1.75e-11 60.5
Msa1321740 AT2G36910.1 31.132 106 71 1 2 105 499 604 3.54e-11 59.7
Msa1321740 AT2G36910.1 29.524 105 72 1 3 105 1156 1260 8.64e-11 58.5
Msa1321740 AT1G70610.1 30.612 98 64 1 11 104 594 691 5.27e-11 58.9
Msa1321740 AT1G70610.2 30.612 98 64 1 11 104 413 510 5.33e-11 58.9

Find 254 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATCTAGTCCAGAATATT+TGG 0.128442 8_4:-27891298 None:intergenic
CTTCTGGTTCATTTCTTTAT+TGG 0.138761 8_4:+27888835 Msa1321740:five_prime_UTR
TTCATCAGATTTGAGTATTT+TGG 0.148950 8_4:+27890623 Msa1321740:five_prime_UTR
GTCTTACTTTGCTGCACTTT+TGG 0.156412 8_4:+27890399 Msa1321740:five_prime_UTR
ACAAAAGCATATAGTATTAA+AGG 0.182919 8_4:-27888222 None:intergenic
GTTCAAGATAATATACTATT+TGG 0.203307 8_4:+27889451 Msa1321740:five_prime_UTR
CCTATGTTTCTCAATCTTCT+TGG 0.211602 8_4:+27889413 Msa1321740:five_prime_UTR
GGAGAGATCCCTAAGATTTC+AGG 0.212402 8_4:+27889266 Msa1321740:five_prime_UTR
GTGGCTTTCTTCTTGTATAT+TGG 0.219105 8_4:+27887717 Msa1321740:five_prime_UTR
TGATGCTTCCTGCTGATATT+TGG 0.224738 8_4:-27892690 None:intergenic
CTTACAGTTCCTGAAATCTT+AGG 0.226100 8_4:-27889275 None:intergenic
TTATTGGATATCTCCTACTA+TGG 0.229873 8_4:+27888851 Msa1321740:five_prime_UTR
GAAATGAACCAGAAGCTTTC+AGG 0.241925 8_4:-27888827 None:intergenic
ATGTTAATTTAGAGATAAAA+TGG 0.246338 8_4:+27889177 Msa1321740:five_prime_UTR
TCTCACTCTCATTATTGTTT+AGG 0.252251 8_4:-27889064 None:intergenic
TGCAGACTTCATCGAACTTT+TGG 0.253157 8_4:+27890278 Msa1321740:five_prime_UTR
AAAGAGAATCAATTAATAAA+AGG 0.255708 8_4:-27887315 None:intergenic
GGAATCACTTGTACATTTAA+AGG 0.256553 8_4:+27891624 Msa1321740:five_prime_UTR
ATATGATGAACTCAAATTCT+AGG 0.273971 8_4:+27889916 Msa1321740:five_prime_UTR
GTTGGTATTGGTGCTCTTCC+TGG 0.274882 8_4:+27888579 Msa1321740:five_prime_UTR
TCACAGTTCTTGCAACATTA+AGG 0.274883 8_4:+27888940 Msa1321740:five_prime_UTR
GCCACACAGGTGAGGGAATA+AGG 0.283604 8_4:-27890657 None:intergenic
TTCAAGATGGAAACTTCATT+TGG 0.290676 8_4:+27889123 Msa1321740:five_prime_UTR
AACCTTAGCTTGAATCATAT+TGG 0.292914 8_4:-27889003 None:intergenic
TGAATGGAGCCCAAATATTC+TGG 0.295341 8_4:+27891288 Msa1321740:five_prime_UTR
TCTTATGCTCTTACCTTGAA+TGG 0.304935 8_4:+27891272 Msa1321740:five_prime_UTR
TGTTGCAAGAACTGTGAAAA+TGG 0.305510 8_4:-27888934 None:intergenic
TTAGAATATTAAACTCTATA+TGG 0.307061 8_4:+27887695 Msa1321740:five_prime_UTR
CAATACCAACAACAATAAAA+AGG 0.311109 8_4:-27888566 None:intergenic
GATTGTTCAAAGAGTCAAAT+TGG 0.312440 8_4:+27887672 Msa1321740:five_prime_UTR
AATATGCAGGTGAAATTTCA+TGG 0.313867 8_4:+27887338 Msa1321740:five_prime_UTR
CATGGTGATCTTACAGAAAT+AGG 0.313927 8_4:+27889550 Msa1321740:five_prime_UTR
CATTGATCTTCAAGGCTTAG+AGG 0.317089 8_4:+27891445 Msa1321740:five_prime_UTR
GAGGAACAGAATTCTTGTTT+TGG 0.324815 8_4:+27892325 Msa1321740:CDS
AAGAGACAAAACAGTCATTC+TGG 0.328739 8_4:+27889800 Msa1321740:five_prime_UTR
TATTATAGATAGATAGATTA+GGG 0.329225 8_4:-27892863 None:intergenic
GGAAGTAGGGTCGGAGTTGT+TGG 0.329731 8_4:+27891648 Msa1321740:five_prime_UTR
CTTTCATTCCAATGTGGAAA+TGG 0.331314 8_4:+27891048 Msa1321740:five_prime_UTR
CCCAAATATTCTGGACTAGA+TGG 0.336513 8_4:+27891297 Msa1321740:five_prime_UTR
GGTTGCATCAATATACATTC+AGG 0.337976 8_4:+27890764 Msa1321740:five_prime_UTR
ATGTTGTGTTTGGTCATATT+AGG 0.344762 8_4:+27890235 Msa1321740:five_prime_UTR
TGTACTCAGACGATGAAATA+TGG 0.346833 8_4:+27891868 Msa1321740:exon
TAATGCTCCATTAGTCCTTA+AGG 0.348138 8_4:+27891602 Msa1321740:five_prime_UTR
GGGATGAACATTCGCTCAAT+AGG 0.348357 8_4:+27891753 Msa1321740:five_prime_UTR
CACAACAGATTGAGACAATA+AGG 0.349108 8_4:-27887519 None:intergenic
GTTAATTCTTTACTCGGTTT+AGG 0.349178 8_4:+27887973 Msa1321740:five_prime_UTR
AAGGTGGCATCAGTTACTTT+TGG 0.349476 8_4:-27890322 None:intergenic
TCTTGGTAAAGTATTTCATT+TGG 0.350051 8_4:+27889862 Msa1321740:five_prime_UTR
GATGATATAGTTTGATAAGT+TGG 0.354453 8_4:-27891324 None:intergenic
TAAGAACAATACAAAGAGTT+TGG 0.355418 8_4:+27888110 Msa1321740:five_prime_UTR
AATTGTAGCAATTGAAGTTT+TGG 0.363965 8_4:+27890680 Msa1321740:five_prime_UTR
GCATTATCAAAGGATTCATT+TGG 0.367390 8_4:+27887629 Msa1321740:five_prime_UTR
AGAGGTGATATTCTTATTGA+TGG 0.370426 8_4:+27891732 Msa1321740:five_prime_UTR
TATATTGATGCAACCATTGC+AGG 0.375408 8_4:-27890756 None:intergenic
TCTAATTATTCTTTGTAGAA+TGG 0.377725 8_4:-27892384 None:intergenic
CATTGTTGCTGTTCCTGCAA+TGG 0.379338 8_4:+27890743 Msa1321740:five_prime_UTR
GTAACTGATGCCACCTTGAT+TGG 0.381941 8_4:+27890328 Msa1321740:five_prime_UTR
ATCATATTGGATAGAGCCTC+TGG 0.385096 8_4:-27888990 None:intergenic
TGACGAACCTTCAAAGCTAA+TGG 0.385539 8_4:+27892602 Msa1321740:CDS
GCACAGATCCTGAAAGCTTC+TGG 0.387221 8_4:+27888819 Msa1321740:five_prime_UTR
TTAGTGCCTCTTCTTATATG+TGG 0.390325 8_4:+27888603 Msa1321740:five_prime_UTR
ATAACCGACCTCCATCTTCA+TGG 0.401331 8_4:+27891408 Msa1321740:five_prime_UTR
GTGATTCCCTTAAGGACTAA+TGG 0.401623 8_4:-27891609 None:intergenic
TTAAGGACTAATGGAGCATT+AGG 0.404494 8_4:-27891600 None:intergenic
AAACAAGGTCTTTCCATAGT+TGG 0.404925 8_4:+27888276 Msa1321740:five_prime_UTR
TGCAGTTGATGCTTATAGAA+TGG 0.405998 8_4:+27888476 Msa1321740:five_prime_UTR
AAGGGCAACATTGATCTTCA+AGG 0.408918 8_4:+27891437 Msa1321740:five_prime_UTR
TGTTGGATGGAAGCCACTTT+GGG 0.412669 8_4:+27890183 Msa1321740:five_prime_UTR
TCAAGATGGAAACTTCATTT+GGG 0.414233 8_4:+27889124 Msa1321740:five_prime_UTR
AAAATTCATGACTGGAGCTT+TGG 0.415095 8_4:-27890921 None:intergenic
TGAGTGATGAAGGTGGAAAT+TGG 0.415630 8_4:+27892255 Msa1321740:CDS
AGCCATGTTTGCTTCATCTT+CGG 0.416144 8_4:-27888040 None:intergenic
CTGTTCTGCGCAGGCCGTGT+GGG 0.421366 8_4:+27891239 Msa1321740:intron
AGAGTTCATATGGTTGTCTA+AGG 0.423555 8_4:+27888797 Msa1321740:five_prime_UTR
TTATTATAGATAGATAGATT+AGG 0.423729 8_4:-27892864 None:intergenic
ATTGATTCTCTTTAATATGC+AGG 0.424548 8_4:+27887325 Msa1321740:five_prime_UTR
CTAAGCTGGTAGCTGAATAT+TGG 0.427374 8_4:+27892643 Msa1321740:CDS
ATGTACAAGTGATTCCCTTA+AGG 0.428567 8_4:-27891617 None:intergenic
TAAATCTTGTGCTTTAGATA+AGG 0.428696 8_4:+27889510 Msa1321740:five_prime_UTR
CTCAGAAGTCGATACTATCT+TGG 0.430238 8_4:+27889845 Msa1321740:five_prime_UTR
CCATCTAGTCCAGAATATTT+GGG 0.430826 8_4:-27891297 None:intergenic
GATGGAAAAGTTATTCAATC+AGG 0.430996 8_4:+27889947 Msa1321740:five_prime_UTR
CTCTTCCGAGGCAAAACAAT+TGG 0.431009 8_4:-27892292 None:intergenic
GCCTCTGGGATAGTTCTAAC+AGG 0.431734 8_4:-27888975 None:intergenic
TGAAGGCACAATATAGAAGA+AGG 0.432079 8_4:-27887819 None:intergenic
TTACAGTTCCTGAAATCTTA+GGG 0.433299 8_4:-27889274 None:intergenic
AATCAAGATAGTGAAAATAA+TGG 0.433788 8_4:+27890049 Msa1321740:five_prime_UTR
TCGGCGTCCATTAGCTTTGA+AGG 0.437719 8_4:-27892609 None:intergenic
GTTTGTGGACCAGTTGGATC+TGG 0.439211 8_4:+27889215 Msa1321740:five_prime_UTR
AATGCTCCATTAGTCCTTAA+GGG 0.439950 8_4:+27891603 Msa1321740:five_prime_UTR
CTGAATATTGGTCCAGCTGC+AGG 0.440031 8_4:+27892655 Msa1321740:CDS
TGAACTCAAATTCTAGGTAA+TGG 0.441875 8_4:+27889922 Msa1321740:five_prime_UTR
TGAAAAGAGTTGGTTCTTGA+GGG 0.443127 8_4:-27891809 None:intergenic
GCAGTTGATGCTTATAGAAT+GGG 0.443895 8_4:+27888477 Msa1321740:five_prime_UTR
ATGGTCATGGTCCTATCTTA+TGG 0.446364 8_4:+27892473 Msa1321740:CDS
TTGCAACTTGTTCTTTCCAT+CGG 0.452985 8_4:+27888540 Msa1321740:five_prime_UTR
TCTAGCATCAAGGGTCCAAT+TGG 0.456107 8_4:+27890121 Msa1321740:five_prime_UTR
GAATATTTGGGCTCCATTCA+AGG 0.457374 8_4:-27891285 None:intergenic
GTCGGAGTTGTTGGAAGGAC+TGG 0.457788 8_4:+27891657 Msa1321740:five_prime_UTR
ATAAGAATATCACCTCTTGA+AGG 0.458803 8_4:-27891726 None:intergenic
TCGGAAGAGTTCTACTTAAG+AGG 0.460051 8_4:+27892306 Msa1321740:CDS
GTACATTTAAAGGAGGAAGT+AGG 0.460503 8_4:+27891634 Msa1321740:five_prime_UTR
AGGGACATTGATGTTGTGTT+TGG 0.461862 8_4:+27890225 Msa1321740:five_prime_UTR
ACACAACATCAATGTCCCTT+TGG 0.461903 8_4:-27890221 None:intergenic
TCTTGGGTTAATTCTTTACT+CGG 0.462519 8_4:+27887967 Msa1321740:five_prime_UTR
ATTCATGACTGGAGCTTTGG+TGG 0.463530 8_4:-27890918 None:intergenic
CATTCGCTCAATAGGGTTGA+AGG 0.464712 8_4:+27891761 Msa1321740:five_prime_UTR
ATCCAATATGATTCAAGCTA+AGG 0.465231 8_4:+27889001 Msa1321740:five_prime_UTR
AAGGTAATTCTTCCTGCAGC+TGG 0.466313 8_4:-27892667 None:intergenic
ATGTTGGATGGAAGCCACTT+TGG 0.468588 8_4:+27890182 Msa1321740:five_prime_UTR
TTTGCAGCCGAGACATCGCT+TGG 0.468875 8_4:+27890941 Msa1321740:five_prime_UTR
TACAAAAGAAGTACTAGAAA+AGG 0.471545 8_4:-27890368 None:intergenic
TATGTTCAGATGGAATATAA+TGG 0.474858 8_4:-27889889 None:intergenic
GGCATCTGTGGCTGAATCAA+TGG 0.479332 8_4:-27892363 None:intergenic
TTGAAGATCAATGTTGCCCT+TGG 0.480069 8_4:-27891435 None:intergenic
AGACAGAAAATTGCAGTTTG+TGG 0.480348 8_4:+27889200 Msa1321740:five_prime_UTR
CCTGTTCTGCGCAGGCCGTG+TGG 0.480386 8_4:+27891238 Msa1321740:intron
CCTGGGGATAGATATCTTTG+AGG 0.480686 8_4:-27891145 None:intergenic
TGTGTAAGTTGTGCACCAAT+TGG 0.484263 8_4:-27890136 None:intergenic
GAATTAACATACCATAAGAT+AGG 0.484297 8_4:-27892484 None:intergenic
GATCATTAAGTTACAATCAT+GGG 0.485000 8_4:+27888734 Msa1321740:five_prime_UTR
CATGGTGGTTTCATATAACA+TGG 0.488149 8_4:+27888508 Msa1321740:five_prime_UTR
GGATGAACATTCGCTCAATA+GGG 0.488444 8_4:+27891754 Msa1321740:five_prime_UTR
AATGTAATTCACAATTTCTC+CGG 0.488753 8_4:-27888454 None:intergenic
CTAGTTAAAATTCTTCCTAC+AGG 0.488878 8_4:-27890502 None:intergenic
GTTGAATCAAAGAAAAGCAT+TGG 0.492235 8_4:-27890478 None:intergenic
GCAGCTAAAGCTTTCTAGCT+CGG 0.493135 8_4:+27888413 Msa1321740:five_prime_UTR
GAAGGTGGAAATTGGAGCTT+GGG 0.494881 8_4:+27892263 Msa1321740:CDS
TATGAGAATCTCCTAAAAGC+TGG 0.497107 8_4:+27889974 Msa1321740:five_prime_UTR
CCAAGAAGATTGAGAAACAT+AGG 0.501974 8_4:-27889413 None:intergenic
CCCTTGGAAGGCCATGAAGA+TGG 0.502085 8_4:-27891419 None:intergenic
AGATCATTAAGTTACAATCA+TGG 0.503257 8_4:+27888733 Msa1321740:five_prime_UTR
AGCTGAGCCTCCTGCCGTTG+TGG 0.505507 8_4:+27891382 Msa1321740:five_prime_UTR
AAATTCTAGGTAATGGAAGA+TGG 0.505850 8_4:+27889929 Msa1321740:five_prime_UTR
TCCATCTTCATGGCCTTCCA+AGG 0.507076 8_4:+27891418 Msa1321740:five_prime_UTR
TTGAAAAGAGTTGGTTCTTG+AGG 0.507627 8_4:-27891810 None:intergenic
ACAACGGCAGGAGGCTCAGC+TGG 0.509104 8_4:-27891380 None:intergenic
AACCACTCCAAGCGATGTCT+CGG 0.511786 8_4:-27890948 None:intergenic
TAACCATTCCATTTCCACAT+TGG 0.514609 8_4:-27891056 None:intergenic
TGCGCGATAAAGAGTTCATA+TGG 0.515342 8_4:+27888787 Msa1321740:five_prime_UTR
TTGCTTCATCTTCGGAAACA+AGG 0.516337 8_4:-27888032 None:intergenic
CCACTGCAAGGGAACTAATA+CGG 0.516766 8_4:+27890885 Msa1321740:five_prime_UTR
CGACTCTTCATTCTCTAAGC+TGG 0.516955 8_4:+27892629 Msa1321740:CDS
AATGCTTTACAAATTCAAGA+TGG 0.517547 8_4:+27889110 Msa1321740:five_prime_UTR
TCATATTAGTTATGTTCAGA+TGG 0.518730 8_4:-27889899 None:intergenic
AGTTATGCAGTGAGTGATGA+AGG 0.519451 8_4:+27892245 Msa1321740:intron
ATTCCAATGTGGAAATGGAA+TGG 0.521563 8_4:+27891053 Msa1321740:five_prime_UTR
ATTACATTAATTATTCCAAA+GGG 0.523869 8_4:+27890206 Msa1321740:five_prime_UTR
TACATTTAAAGGAGGAAGTA+GGG 0.523869 8_4:+27891635 Msa1321740:five_prime_UTR
ACAACAGCAGAAACCATAGT+AGG 0.524985 8_4:-27888864 None:intergenic
ATTGGAAAACAGGTTAATGT+AGG 0.530300 8_4:+27889379 Msa1321740:intron
ATGCTGCCCTTGAAAAGAGT+TGG 0.531193 8_4:-27891819 None:intergenic
TAATGCATAAACTCCAATCA+AGG 0.531246 8_4:-27890341 None:intergenic
AGTACAGACCTAGTGGGTCC+AGG 0.531720 8_4:-27891851 None:intergenic
AGATCAATGTTGCCCTTGGA+AGG 0.533326 8_4:-27891431 None:intergenic
TTCCGAAGATGAAGCAAACA+TGG 0.534699 8_4:+27888038 Msa1321740:five_prime_UTR
GAGGTGATATTCTTATTGAT+GGG 0.534967 8_4:+27891733 Msa1321740:five_prime_UTR
CGGTTATGATCCACAACGGC+AGG 0.536341 8_4:-27891392 None:intergenic
ATTGCAGTTTGTGGACCAGT+TGG 0.537236 8_4:+27889209 Msa1321740:five_prime_UTR
CCGTATTAGTTCCCTTGCAG+TGG 0.539305 8_4:-27890885 None:intergenic
AGGAGAGATTTCTAGCATCA+AGG 0.540008 8_4:+27890111 Msa1321740:five_prime_UTR
TCTTGCAACATTAAGGAACA+TGG 0.540629 8_4:+27888947 Msa1321740:five_prime_UTR
TCGGCTGCAAAATTCATGAC+TGG 0.540832 8_4:-27890929 None:intergenic
TTGTTAGTTTGCATTATCAA+AGG 0.542193 8_4:+27887619 Msa1321740:five_prime_UTR
GGAGAGATTTCTAGCATCAA+GGG 0.542547 8_4:+27890112 Msa1321740:five_prime_UTR
TTGTGATTGCTTCAGTCACA+TGG 0.543699 8_4:+27890712 Msa1321740:five_prime_UTR
ATTACCTTCCAAATATCAGC+AGG 0.545093 8_4:+27892682 Msa1321740:CDS
AATATTATCAAGCCACTGCA+AGG 0.548685 8_4:+27890873 Msa1321740:five_prime_UTR
GTTGTTGGAAGGACTGGAAG+TGG 0.550898 8_4:+27891663 Msa1321740:five_prime_UTR
AGGGAACTAATACGGATCAA+TGG 0.553244 8_4:+27890893 Msa1321740:five_prime_UTR
TATACTATTTGGAAAACCAA+TGG 0.556317 8_4:+27889462 Msa1321740:five_prime_UTR
CGTTTAGTTGAGCCTTCAAG+AGG 0.557917 8_4:+27891714 Msa1321740:five_prime_UTR
CAATCTTCTTGGATACAAAG+TGG 0.558118 8_4:+27889424 Msa1321740:five_prime_UTR
TGAAGGTGGAAATTGGAGCT+TGG 0.558934 8_4:+27892262 Msa1321740:CDS
AGTCGGTATCTCAAAGACAT+TGG 0.558952 8_4:+27888325 Msa1321740:five_prime_UTR
TCTTTGTAGAATGGCATCTG+TGG 0.561543 8_4:-27892375 None:intergenic
GATTACATTAATTATTCCAA+AGG 0.562733 8_4:+27890205 Msa1321740:five_prime_UTR
AAAAGTCCACATATAAGAAG+AGG 0.566314 8_4:-27888609 None:intergenic
TACAATTGCCACACAGGTGA+GGG 0.568372 8_4:-27890664 None:intergenic
TTCTTTGATTCAACTCCTGT+AGG 0.568606 8_4:+27890487 Msa1321740:five_prime_UTR
GTAAAGCATTAACTGAACAC+TGG 0.570085 8_4:-27889097 None:intergenic
TAATCTATGAAATTTGAAGC+AGG 0.575180 8_4:+27892884 Msa1321740:three_prime_UTR
AAGTGATTGGTAATGTTGGA+TGG 0.575554 8_4:+27890170 Msa1321740:five_prime_UTR
AATTGCTACAATTGCCACAC+AGG 0.579084 8_4:-27890670 None:intergenic
TTGTCTAATCCTCAGAGTGA+AGG 0.580953 8_4:+27890091 Msa1321740:intron
ATCACAGTTTATGATTGCAC+AGG 0.582110 8_4:+27888668 Msa1321740:five_prime_UTR
CCTCAAAGATATCTATCCCC+AGG 0.583443 8_4:+27891145 Msa1321740:five_prime_UTR
GAATATTAAACTCTATATGG+TGG 0.584154 8_4:+27887698 Msa1321740:five_prime_UTR
GGGCAGCATTAGAACAAACC+TGG 0.584276 8_4:+27891833 Msa1321740:five_prime_UTR
ATAGAATGGGAGAATTTCCA+TGG 0.587158 8_4:+27888490 Msa1321740:five_prime_UTR
ATAAGAAGAGGCACTAAACC+AGG 0.587358 8_4:-27888597 None:intergenic
CATTCTGGTTACTCATCAAG+TGG 0.588906 8_4:+27889815 Msa1321740:five_prime_UTR
TGCACTCACAAGTAGTTCAA+AGG 0.590092 8_4:-27890002 None:intergenic
GAAAATGAGATCAGCTCTGA+TGG 0.591797 8_4:+27888374 Msa1321740:five_prime_UTR
GGGAATCACTTGTTAGAGAG+AGG 0.593166 8_4:+27888085 Msa1321740:five_prime_UTR
TGCTTCATCTTCGGAAACAA+GGG 0.594205 8_4:-27888031 None:intergenic
CCATCTTCATGGCCTTCCAA+GGG 0.596057 8_4:+27891419 Msa1321740:five_prime_UTR
ATCACTTGTACATTTAAAGG+AGG 0.596156 8_4:+27891627 Msa1321740:five_prime_UTR
GCTTCCTGCTGATATTTGGA+AGG 0.602207 8_4:-27892686 None:intergenic
TGAGCATCAACTGCACTGAA+AGG 0.603415 8_4:-27889667 None:intergenic
AATAGACAGTGACATGGTCA+TGG 0.603422 8_4:+27892460 Msa1321740:CDS
CTCAGACGATGAAATATGGA+AGG 0.605378 8_4:+27891872 Msa1321740:exon
AGCCGAGACATCGCTTGGAG+TGG 0.605454 8_4:+27890946 Msa1321740:five_prime_UTR
ATGTCACTGTCTATTACAGT+TGG 0.607624 8_4:-27892452 None:intergenic
CTCGGCAAGGACAAGACACT+CGG 0.608185 8_4:+27888431 Msa1321740:five_prime_UTR
AAGCCACTGTACTATATCAA+AGG 0.608243 8_4:-27887788 None:intergenic
GGAAAACAGGTTAATGTAGG+TGG 0.608869 8_4:+27889382 Msa1321740:intron
CTACAATTGCCACACAGGTG+AGG 0.609029 8_4:-27890665 None:intergenic
GCAAGGACAAGACACTCGGC+CGG 0.609032 8_4:+27888435 Msa1321740:five_prime_UTR
CAGAGAGGGATTAACATGAG+TGG 0.610628 8_4:+27889574 Msa1321740:five_prime_UTR
TTTAAAGGAGGAAGTAGGGT+CGG 0.612931 8_4:+27891639 Msa1321740:five_prime_UTR
GGAATGTCTTCAAGAGCTAG+TGG 0.613576 8_4:-27888006 None:intergenic
AGAACAAACCTGGACCCACT+AGG 0.618912 8_4:+27891843 Msa1321740:five_prime_UTR
GTAGGGTCGGAGTTGTTGGA+AGG 0.620337 8_4:+27891652 Msa1321740:five_prime_UTR
TGTCACTAAAGTCTTTGAGT+CGG 0.621879 8_4:+27888308 Msa1321740:five_prime_UTR
ATTGTTCTTTCATTCCAATG+TGG 0.623612 8_4:+27891042 Msa1321740:five_prime_UTR
GATGGAAAGAACAAGTTGCA+AGG 0.624787 8_4:-27888538 None:intergenic
TTACAGAAATAGGTCAGAGA+GGG 0.626100 8_4:+27889560 Msa1321740:five_prime_UTR
TCGTCTGAGTACAGACCTAG+TGG 0.628617 8_4:-27891858 None:intergenic
CAGCTTAGAGAATGAAGAGT+CGG 0.630467 8_4:-27892628 None:intergenic
AATTTGAAGCAGGTATGTTG+TGG 0.631070 8_4:+27892894 Msa1321740:three_prime_UTR
TGGTGCACAACTTACACAAG+AGG 0.633016 8_4:+27890141 Msa1321740:five_prime_UTR
ACTGAGGAAGATTTCAAACA+AGG 0.636534 8_4:+27888261 Msa1321740:five_prime_UTR
ACCTTATTCCCTCACCTGTG+TGG 0.639082 8_4:+27890656 Msa1321740:five_prime_UTR
ATATTATCAAGCCACTGCAA+GGG 0.640743 8_4:+27890874 Msa1321740:five_prime_UTR
TAATTAATGTAATCCCAAAG+TGG 0.644150 8_4:-27890196 None:intergenic
CTTGCAACATTAAGGAACAT+GGG 0.644433 8_4:+27888948 Msa1321740:five_prime_UTR
TAAAGCTTTCTAGCTCGGCA+AGG 0.644469 8_4:+27888418 Msa1321740:five_prime_UTR
TCATATTGGATAGAGCCTCT+GGG 0.647413 8_4:-27888989 None:intergenic
TTATGATCCACAACGGCAGG+AGG 0.654130 8_4:-27891389 None:intergenic
TCATCTTCGGAAACAAGGGA+AGG 0.655033 8_4:-27888027 None:intergenic
TGAGTGGAGGACAAAAGCAA+AGG 0.656354 8_4:+27889590 Msa1321740:five_prime_UTR
AGAGGGATTAACATGAGTGG+AGG 0.656829 8_4:+27889577 Msa1321740:five_prime_UTR
CATGTTATATGAAACCACCA+TGG 0.668733 8_4:-27888507 None:intergenic
GAATGGGAGAATTTCCATGG+TGG 0.669117 8_4:+27888493 Msa1321740:five_prime_UTR
CTTACAGAAATAGGTCAGAG+AGG 0.670360 8_4:+27889559 Msa1321740:five_prime_UTR
AAACCTTTGATATAGTACAG+TGG 0.672192 8_4:+27887785 Msa1321740:five_prime_UTR
AGCTAAAACTGATAACTCTG+AGG 0.673867 8_4:+27887588 Msa1321740:five_prime_UTR
TTGGAAGGCCATGAAGATGG+AGG 0.676248 8_4:-27891416 None:intergenic
TACTGTACGAGCATTCAACA+TGG 0.678630 8_4:+27890970 Msa1321740:five_prime_UTR
TATGCAGTGAGTGATGAAGG+TGG 0.679191 8_4:+27892248 Msa1321740:intron
TCTTAAGTAGAACTCTTCCG+AGG 0.683898 8_4:-27892304 None:intergenic
TAAATACTCAAATAGAACTG+AGG 0.687625 8_4:+27888245 Msa1321740:five_prime_UTR
AAGGCCATGAAGATGGAGGT+CGG 0.689947 8_4:-27891412 None:intergenic
TGCATAAACTCCAATCAAGG+TGG 0.690505 8_4:-27890338 None:intergenic
CGTCTGAGTACAGACCTAGT+GGG 0.697565 8_4:-27891857 None:intergenic
CTATTTCTGTAAGATCACCA+TGG 0.700801 8_4:-27889549 None:intergenic
AATGAGATCAGCTCTGATGG+TGG 0.709785 8_4:+27888377 Msa1321740:five_prime_UTR
ACCTGTTAGAACTATCCCAG+AGG 0.728160 8_4:+27888974 Msa1321740:five_prime_UTR
AACTGTAATAGACAGTGACA+TGG 0.728393 8_4:+27892454 Msa1321740:CDS
AAGAAAGAGACAATCCCACA+CGG 0.728881 8_4:-27891253 None:intergenic
AGAATGCACAGTTATAACTG+TGG 0.733783 8_4:+27892418 Msa1321740:CDS
AGGTCGGTTATGATCCACAA+CGG 0.744004 8_4:-27891396 None:intergenic
CTGCACTGAAAGGATCATCG+AGG 0.770033 8_4:-27889657 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATAGAAATATAATTTAT+TGG - chr8_4:27892123-27892142 None:intergenic 10.0%
!!! ATAAATTATATTTCTATGTT+TGG + chr8_4:27892123-27892142 Msa1321740:intron 10.0%
!! AAAGAGAATCAATTAATAAA+AGG - chr8_4:27887318-27887337 None:intergenic 15.0%
!! TTAGAATATTAAACTCTATA+TGG + chr8_4:27887695-27887714 Msa1321740:five_prime_UTR 15.0%
!! ATGTTAATTTAGAGATAAAA+TGG + chr8_4:27889177-27889196 Msa1321740:five_prime_UTR 15.0%
!! AATGTTTATTCATATGAATT+TGG - chr8_4:27889334-27889353 None:intergenic 15.0%
!! ATTACATTAATTATTCCAAA+GGG + chr8_4:27890206-27890225 Msa1321740:five_prime_UTR 15.0%
!! ATACAAAAAACAGAAATTAT+TGG - chr8_4:27891557-27891576 None:intergenic 15.0%
!!! AATTTCTGTTTTTTGTATAT+TGG + chr8_4:27891559-27891578 Msa1321740:intron 15.0%
!!! TATATTTGATTTGTATGATT+AGG + chr8_4:27891987-27892006 Msa1321740:intron 15.0%
!! TAATATAATGAATGATAGAA+AGG - chr8_4:27892183-27892202 None:intergenic 15.0%
!! GTAAATAAATTGAAGAAAAA+TGG + chr8_4:27892744-27892763 Msa1321740:intron 15.0%
!! TATTATAGATAGATAGATTA+GGG - chr8_4:27892866-27892885 None:intergenic 15.0%
!! TTATTATAGATAGATAGATT+AGG - chr8_4:27892867-27892886 None:intergenic 15.0%
!!! CTATTAATATGTTTTCTTTC+AGG - chr8_4:27888161-27888180 None:intergenic 20.0%
!!! ACAAAAGCATATAGTATTAA+AGG - chr8_4:27888225-27888244 None:intergenic 20.0%
!!! CTCTAAATTAACATCTTTTA+AGG - chr8_4:27889171-27889190 None:intergenic 20.0%
!! GTTACTAATAGAACATATTT+AGG + chr8_4:27889297-27889316 Msa1321740:intron 20.0%
!! GTTCAAGATAATATACTATT+TGG + chr8_4:27889451-27889470 Msa1321740:five_prime_UTR 20.0%
!! AATCAAGATAGTGAAAATAA+TGG + chr8_4:27890049-27890068 Msa1321740:five_prime_UTR 20.0%
!! GATTACATTAATTATTCCAA+AGG + chr8_4:27890205-27890224 Msa1321740:five_prime_UTR 20.0%
!!! AGATATTTTCATTCCTAATA+AGG + chr8_4:27890529-27890548 Msa1321740:intron 20.0%
!!! GATATTTTCATTCCTAATAA+GGG + chr8_4:27890530-27890549 Msa1321740:intron 20.0%
!!! AGATTTTTTTTTCCCTTATT+AGG - chr8_4:27890545-27890564 None:intergenic 20.0%
!!! CATTTTTATTTTTTTCGCAA+GGG - chr8_4:27891193-27891212 None:intergenic 20.0%
!!! ACATTTTTATTTTTTTCGCA+AGG - chr8_4:27891194-27891213 None:intergenic 20.0%
!!! GAATTTCCAATAGATTTTTA+GGG - chr8_4:27891217-27891236 None:intergenic 20.0%
!!! AGAATTTCCAATAGATTTTT+AGG - chr8_4:27891218-27891237 None:intergenic 20.0%
!! AAATGAACTAACTTTACAAA+TGG + chr8_4:27891896-27891915 Msa1321740:intron 20.0%
!! CAAATCAAATATAATCAAAC+TGG - chr8_4:27891980-27891999 None:intergenic 20.0%
!! TCATTAATATTGAAAGAGTA+AGG - chr8_4:27892098-27892117 None:intergenic 20.0%
!!! TATTTTGCAACCAATAAATA+AGG + chr8_4:27892201-27892220 Msa1321740:intron 20.0%
!! TCTAATTATTCTTTGTAGAA+TGG - chr8_4:27892387-27892406 None:intergenic 20.0%
!! ATTGATTCTCTTTAATATGC+AGG + chr8_4:27887325-27887344 Msa1321740:five_prime_UTR 25.0%
!!! TTGTTAGTTTGCATTATCAA+AGG + chr8_4:27887619-27887638 Msa1321740:five_prime_UTR 25.0%
! GAATATTAAACTCTATATGG+TGG + chr8_4:27887698-27887717 Msa1321740:five_prime_UTR 25.0%
!!! TCATTTTTTTGAGCTAATAG+TGG - chr8_4:27887895-27887914 None:intergenic 25.0%
!! ATGAAAAATTTGTTCATGCT+TGG + chr8_4:27888064-27888083 Msa1321740:five_prime_UTR 25.0%
!! TGAAAAATTTGTTCATGCTT+GGG + chr8_4:27888065-27888084 Msa1321740:five_prime_UTR 25.0%
! TAAGAACAATACAAAGAGTT+TGG + chr8_4:27888110-27888129 Msa1321740:five_prime_UTR 25.0%
! TAAATACTCAAATAGAACTG+AGG + chr8_4:27888245-27888264 Msa1321740:five_prime_UTR 25.0%
! AATGTAATTCACAATTTCTC+CGG - chr8_4:27888457-27888476 None:intergenic 25.0%
! CAATACCAACAACAATAAAA+AGG - chr8_4:27888569-27888588 None:intergenic 25.0%
!!! CTTTTTATTGTTGTTGGTAT+TGG + chr8_4:27888567-27888586 Msa1321740:five_prime_UTR 25.0%
! AGATCATTAAGTTACAATCA+TGG + chr8_4:27888733-27888752 Msa1321740:five_prime_UTR 25.0%
! GATCATTAAGTTACAATCAT+GGG + chr8_4:27888734-27888753 Msa1321740:five_prime_UTR 25.0%
!!! AAAATGGTTTTAGCATTCAA+TGG - chr8_4:27888921-27888940 None:intergenic 25.0%
! AATGCTTTACAAATTCAAGA+TGG + chr8_4:27889110-27889129 Msa1321740:five_prime_UTR 25.0%
!!! AAATTAACATCTTTTAAGGC+TGG - chr8_4:27889167-27889186 None:intergenic 25.0%
!! TATCTGAAGCTTTACTATAT+TGG + chr8_4:27889361-27889380 Msa1321740:intron 25.0%
! TATACTATTTGGAAAACCAA+TGG + chr8_4:27889462-27889481 Msa1321740:five_prime_UTR 25.0%
!! TAAATCTTGTGCTTTAGATA+AGG + chr8_4:27889510-27889529 Msa1321740:five_prime_UTR 25.0%
! TACTAATATTGACCTCATTT+CGG + chr8_4:27889724-27889743 Msa1321740:intron 25.0%
!! TCTTGGTAAAGTATTTCATT+TGG + chr8_4:27889862-27889881 Msa1321740:five_prime_UTR 25.0%
! TATGTTCAGATGGAATATAA+TGG - chr8_4:27889892-27889911 None:intergenic 25.0%
! TCATATTAGTTATGTTCAGA+TGG - chr8_4:27889902-27889921 None:intergenic 25.0%
! ATATGATGAACTCAAATTCT+AGG + chr8_4:27889916-27889935 Msa1321740:five_prime_UTR 25.0%
! TAATTAATGTAATCCCAAAG+TGG - chr8_4:27890199-27890218 None:intergenic 25.0%
!!! AGTTACTTTTGGAATTTCAA+TGG - chr8_4:27890314-27890333 None:intergenic 25.0%
!!! TACAAAAGAAGTACTAGAAA+AGG - chr8_4:27890371-27890390 None:intergenic 25.0%
!! GTACTTCTTTTGTATATGTA+AGG + chr8_4:27890377-27890396 Msa1321740:five_prime_UTR 25.0%
!! TTCATCAGATTTGAGTATTT+TGG + chr8_4:27890623-27890642 Msa1321740:five_prime_UTR 25.0%
!! AATTGTAGCAATTGAAGTTT+TGG + chr8_4:27890680-27890699 Msa1321740:five_prime_UTR 25.0%
! CAAAAACTACTTAAAACTTG+TGG + chr8_4:27891006-27891025 Msa1321740:five_prime_UTR 25.0%
!!! AAATGGAATGGTTAGTTTTA+AGG + chr8_4:27891065-27891084 Msa1321740:five_prime_UTR 25.0%
! AAATGTCCCTAAAAATCTAT+TGG + chr8_4:27891208-27891227 Msa1321740:intron 25.0%
! GATGATATAGTTTGATAAGT+TGG - chr8_4:27891327-27891346 None:intergenic 25.0%
!! GACTTTCATACCTTATTTAT+TGG - chr8_4:27892214-27892233 None:intergenic 25.0%
! GAATTAACATACCATAAGAT+AGG - chr8_4:27892487-27892506 None:intergenic 25.0%
! ATTAAAAGCAGAGAAGAATA+AGG - chr8_4:27892516-27892535 None:intergenic 25.0%
!!! AATTTTTGGCTGGTTTTTAA+AGG + chr8_4:27892564-27892583 Msa1321740:intron 25.0%
!!! ATTTTTGGCTGGTTTTTAAA+GGG + chr8_4:27892565-27892584 Msa1321740:intron 25.0%
!! TAATCTATGAAATTTGAAGC+AGG + chr8_4:27892884-27892903 Msa1321740:three_prime_UTR 25.0%
AATATGCAGGTGAAATTTCA+TGG + chr8_4:27887338-27887357 Msa1321740:five_prime_UTR 30.0%
!!! AGCATTGCATTTTTTTGCTT+TGG + chr8_4:27887550-27887569 Msa1321740:five_prime_UTR 30.0%
!!! CATTTTTTTGCTTTGGCTTA+TGG + chr8_4:27887557-27887576 Msa1321740:five_prime_UTR 30.0%
GCATTATCAAAGGATTCATT+TGG + chr8_4:27887629-27887648 Msa1321740:five_prime_UTR 30.0%
GATTGTTCAAAGAGTCAAAT+TGG + chr8_4:27887672-27887691 Msa1321740:five_prime_UTR 30.0%
AAACCTTTGATATAGTACAG+TGG + chr8_4:27887785-27887804 Msa1321740:five_prime_UTR 30.0%
TATTGTGCCTTCAAAAATCT+TGG + chr8_4:27887829-27887848 Msa1321740:five_prime_UTR 30.0%
! TATGTGACCAAGATTTTTGA+AGG - chr8_4:27887839-27887858 None:intergenic 30.0%
TTCAAAAATCTTGGTCACAT+AGG + chr8_4:27887838-27887857 Msa1321740:five_prime_UTR 30.0%
!!! TTAGCAAGTTGATTTTCTCT+TGG + chr8_4:27887950-27887969 Msa1321740:five_prime_UTR 30.0%
!!! TAGCAAGTTGATTTTCTCTT+GGG + chr8_4:27887951-27887970 Msa1321740:five_prime_UTR 30.0%
TCTTGGGTTAATTCTTTACT+CGG + chr8_4:27887967-27887986 Msa1321740:five_prime_UTR 30.0%
GTTAATTCTTTACTCGGTTT+AGG + chr8_4:27887973-27887992 Msa1321740:five_prime_UTR 30.0%
!!! TCTTTCCATAGTTGGTTTTT+TGG + chr8_4:27888284-27888303 Msa1321740:five_prime_UTR 30.0%
AAAAGTCCACATATAAGAAG+AGG - chr8_4:27888612-27888631 None:intergenic 30.0%
! TTTTCAATGTACCATTTGCA+AGG + chr8_4:27888628-27888647 Msa1321740:five_prime_UTR 30.0%
! ACTGTGATTGACAATTTTGT+AGG - chr8_4:27888656-27888675 None:intergenic 30.0%
!! CTTCTGGTTCATTTCTTTAT+TGG + chr8_4:27888835-27888854 Msa1321740:five_prime_UTR 30.0%
TTATTGGATATCTCCTACTA+TGG + chr8_4:27888851-27888870 Msa1321740:five_prime_UTR 30.0%
ATCCAATATGATTCAAGCTA+AGG + chr8_4:27889001-27889020 Msa1321740:five_prime_UTR 30.0%
! AACCTTAGCTTGAATCATAT+TGG - chr8_4:27889006-27889025 None:intergenic 30.0%
TCTCACTCTCATTATTGTTT+AGG - chr8_4:27889067-27889086 None:intergenic 30.0%
TTCAAGATGGAAACTTCATT+TGG + chr8_4:27889123-27889142 Msa1321740:five_prime_UTR 30.0%
TCAAGATGGAAACTTCATTT+GGG + chr8_4:27889124-27889143 Msa1321740:five_prime_UTR 30.0%
! TCTCTTTTGTATGCAATACT+TGG + chr8_4:27889245-27889264 Msa1321740:five_prime_UTR 30.0%
TTACAGTTCCTGAAATCTTA+GGG - chr8_4:27889277-27889296 None:intergenic 30.0%
GCTTTACTATATTGGAAAAC+AGG + chr8_4:27889369-27889388 Msa1321740:intron 30.0%
ATTGGAAAACAGGTTAATGT+AGG + chr8_4:27889379-27889398 Msa1321740:intron 30.0%
!!! TCATATCTTGTTTTGTCCAT+TGG - chr8_4:27889481-27889500 None:intergenic 30.0%
!! GATATGAATGATTTTAGCCA+TGG + chr8_4:27889532-27889551 Msa1321740:five_prime_UTR 30.0%
TGAACTCAAATTCTAGGTAA+TGG + chr8_4:27889922-27889941 Msa1321740:five_prime_UTR 30.0%
!! AAATTCTAGGTAATGGAAGA+TGG + chr8_4:27889929-27889948 Msa1321740:five_prime_UTR 30.0%
GATGGAAAAGTTATTCAATC+AGG + chr8_4:27889947-27889966 Msa1321740:five_prime_UTR 30.0%
CAAGATAGTGAAAATAATGG+AGG + chr8_4:27890052-27890071 Msa1321740:intron 30.0%
!! GAAAAAGTGATTGGTAATGT+TGG + chr8_4:27890166-27890185 Msa1321740:five_prime_UTR 30.0%
ATGTTGTGTTTGGTCATATT+AGG + chr8_4:27890235-27890254 Msa1321740:five_prime_UTR 30.0%
!!! ATTAGGACAGTGTAGTTTTT+TGG + chr8_4:27890252-27890271 Msa1321740:five_prime_UTR 30.0%
TAATGCATAAACTCCAATCA+AGG - chr8_4:27890344-27890363 None:intergenic 30.0%
! GTTGAATCAAAGAAAAGCAT+TGG - chr8_4:27890481-27890500 None:intergenic 30.0%
CTAGTTAAAATTCTTCCTAC+AGG - chr8_4:27890505-27890524 None:intergenic 30.0%
! GGTTAGTTATATAGTACTGA+AGG - chr8_4:27890586-27890605 None:intergenic 30.0%
TTTGACAGAGAATGAGAATA+AGG - chr8_4:27890795-27890814 None:intergenic 30.0%
TTATTCTCATTCTCTGTCAA+AGG + chr8_4:27890794-27890813 Msa1321740:intron 30.0%
! GGCTTGATAATATTGCTTTA+AGG - chr8_4:27890867-27890886 None:intergenic 30.0%
ATTGTTCTTTCATTCCAATG+TGG + chr8_4:27891042-27891061 Msa1321740:five_prime_UTR 30.0%
AGTAATCTTATGCATTACCT+GGG - chr8_4:27891165-27891184 None:intergenic 30.0%
AAGTAATCTTATGCATTACC+TGG - chr8_4:27891166-27891185 None:intergenic 30.0%
CTAGCTGTCACAAATAAAAT+AGG - chr8_4:27891522-27891541 None:intergenic 30.0%
GGAATCACTTGTACATTTAA+AGG + chr8_4:27891624-27891643 Msa1321740:five_prime_UTR 30.0%
ATCACTTGTACATTTAAAGG+AGG + chr8_4:27891627-27891646 Msa1321740:five_prime_UTR 30.0%
TACATTTAAAGGAGGAAGTA+GGG + chr8_4:27891635-27891654 Msa1321740:five_prime_UTR 30.0%
ATAAGAATATCACCTCTTGA+AGG - chr8_4:27891729-27891748 None:intergenic 30.0%
AGAGGTGATATTCTTATTGA+TGG + chr8_4:27891732-27891751 Msa1321740:five_prime_UTR 30.0%
GAGGTGATATTCTTATTGAT+GGG + chr8_4:27891733-27891752 Msa1321740:five_prime_UTR 30.0%
! TCAAACTGGTTCTTATTGAA+TGG - chr8_4:27891966-27891985 None:intergenic 30.0%
! TATATTTCTATGTTTGGCAC+CGG + chr8_4:27892129-27892148 Msa1321740:intron 30.0%
AATGAATGATAGAAAGGAGA+AGG - chr8_4:27892177-27892196 None:intergenic 30.0%
ATGAGCATATTTCAATGAAG+AGG + chr8_4:27892784-27892803 Msa1321740:intron 30.0%
TGAGCATATTTCAATGAAGA+GGG + chr8_4:27892785-27892804 Msa1321740:intron 30.0%
ATGAAAGCCAAAGAAAAAGC+TGG + chr8_4:27887491-27887510 Msa1321740:five_prime_UTR 35.0%
!! GGAAAATCCAGCTTTTTCTT+TGG - chr8_4:27887501-27887520 None:intergenic 35.0%
CACAACAGATTGAGACAATA+AGG - chr8_4:27887522-27887541 None:intergenic 35.0%
AGCTAAAACTGATAACTCTG+AGG + chr8_4:27887588-27887607 Msa1321740:five_prime_UTR 35.0%
GTGGCTTTCTTCTTGTATAT+TGG + chr8_4:27887717-27887736 Msa1321740:five_prime_UTR 35.0%
AAGCCACTGTACTATATCAA+AGG - chr8_4:27887791-27887810 None:intergenic 35.0%
! TGAAGGCACAATATAGAAGA+AGG - chr8_4:27887822-27887841 None:intergenic 35.0%
ACTGAGGAAGATTTCAAACA+AGG + chr8_4:27888261-27888280 Msa1321740:five_prime_UTR 35.0%
AAACAAGGTCTTTCCATAGT+TGG + chr8_4:27888276-27888295 Msa1321740:five_prime_UTR 35.0%
GACAACCAAAAAACCAACTA+TGG - chr8_4:27888292-27888311 None:intergenic 35.0%
TGTCACTAAAGTCTTTGAGT+CGG + chr8_4:27888308-27888327 Msa1321740:five_prime_UTR 35.0%
!!! GACATTGGTTTTTTAACTCG+AGG + chr8_4:27888340-27888359 Msa1321740:five_prime_UTR 35.0%
!!! ATTGGTTTTTTAACTCGAGG+AGG + chr8_4:27888343-27888362 Msa1321740:five_prime_UTR 35.0%
! TGCAGTTGATGCTTATAGAA+TGG + chr8_4:27888476-27888495 Msa1321740:five_prime_UTR 35.0%
! GCAGTTGATGCTTATAGAAT+GGG + chr8_4:27888477-27888496 Msa1321740:five_prime_UTR 35.0%
ATAGAATGGGAGAATTTCCA+TGG + chr8_4:27888490-27888509 Msa1321740:five_prime_UTR 35.0%
CATGTTATATGAAACCACCA+TGG - chr8_4:27888510-27888529 None:intergenic 35.0%
CATGGTGGTTTCATATAACA+TGG + chr8_4:27888508-27888527 Msa1321740:five_prime_UTR 35.0%
! TTGCAACTTGTTCTTTCCAT+CGG + chr8_4:27888540-27888559 Msa1321740:five_prime_UTR 35.0%
AACAATAAAAAGGACACCGA+TGG - chr8_4:27888559-27888578 None:intergenic 35.0%
! GGTGTCCTTTTTATTGTTGT+TGG + chr8_4:27888561-27888580 Msa1321740:five_prime_UTR 35.0%
TTAGTGCCTCTTCTTATATG+TGG + chr8_4:27888603-27888622 Msa1321740:five_prime_UTR 35.0%
! TTTTGTAGGATCCTTGCAAA+TGG - chr8_4:27888642-27888661 None:intergenic 35.0%
ATCACAGTTTATGATTGCAC+AGG + chr8_4:27888668-27888687 Msa1321740:five_prime_UTR 35.0%
AGAGTTCATATGGTTGTCTA+AGG + chr8_4:27888797-27888816 Msa1321740:five_prime_UTR 35.0%
! TTTTAGTGACAGAACATGCA+AGG - chr8_4:27888893-27888912 None:intergenic 35.0%
TGTTGCAAGAACTGTGAAAA+TGG - chr8_4:27888937-27888956 None:intergenic 35.0%
TCACAGTTCTTGCAACATTA+AGG + chr8_4:27888940-27888959 Msa1321740:five_prime_UTR 35.0%
TCTTGCAACATTAAGGAACA+TGG + chr8_4:27888947-27888966 Msa1321740:five_prime_UTR 35.0%
CTTGCAACATTAAGGAACAT+GGG + chr8_4:27888948-27888967 Msa1321740:five_prime_UTR 35.0%
! GTAAAGCATTAACTGAACAC+TGG - chr8_4:27889100-27889119 None:intergenic 35.0%
AGACAGAAAATTGCAGTTTG+TGG + chr8_4:27889200-27889219 Msa1321740:five_prime_UTR 35.0%
CTTACAGTTCCTGAAATCTT+AGG - chr8_4:27889278-27889297 None:intergenic 35.0%
CCAAGAAGATTGAGAAACAT+AGG - chr8_4:27889416-27889435 None:intergenic 35.0%
CCTATGTTTCTCAATCTTCT+TGG + chr8_4:27889413-27889432 Msa1321740:five_prime_UTR 35.0%
CAATCTTCTTGGATACAAAG+TGG + chr8_4:27889424-27889443 Msa1321740:five_prime_UTR 35.0%
!! CTATTTCTGTAAGATCACCA+TGG - chr8_4:27889552-27889571 None:intergenic 35.0%
CATGGTGATCTTACAGAAAT+AGG + chr8_4:27889550-27889569 Msa1321740:five_prime_UTR 35.0%
TTACAGAAATAGGTCAGAGA+GGG + chr8_4:27889560-27889579 Msa1321740:five_prime_UTR 35.0%
TAGTTTGATACACCGAAATG+AGG - chr8_4:27889739-27889758 None:intergenic 35.0%
AACTGCATCTACAACATTAC+AGG + chr8_4:27889758-27889777 Msa1321740:intron 35.0%
AAGAGACAAAACAGTCATTC+TGG + chr8_4:27889800-27889819 Msa1321740:five_prime_UTR 35.0%
TATGAGAATCTCCTAAAAGC+TGG + chr8_4:27889974-27889993 Msa1321740:five_prime_UTR 35.0%
!! TAATGGAGGTTCTGAAAATG+AGG + chr8_4:27890066-27890085 Msa1321740:intron 35.0%
CAAGAGGAAGAAAAAGTGAT+TGG + chr8_4:27890157-27890176 Msa1321740:five_prime_UTR 35.0%
!! AAGTGATTGGTAATGTTGGA+TGG + chr8_4:27890170-27890189 Msa1321740:five_prime_UTR 35.0%
! TCTTACTTTGCTGCACTTTT+GGG + chr8_4:27890400-27890419 Msa1321740:five_prime_UTR 35.0%
TTCTTTGATTCAACTCCTGT+AGG + chr8_4:27890487-27890506 Msa1321740:five_prime_UTR 35.0%
! ACTAACCTCTTTGAAAATGC+AGG + chr8_4:27890599-27890618 Msa1321740:intron 35.0%
TATATTGATGCAACCATTGC+AGG - chr8_4:27890759-27890778 None:intergenic 35.0%
GGTTGCATCAATATACATTC+AGG + chr8_4:27890764-27890783 Msa1321740:five_prime_UTR 35.0%
TTAAGAAGTTCCTAGCTGAA+TGG - chr8_4:27890825-27890844 None:intergenic 35.0%
AATATTATCAAGCCACTGCA+AGG + chr8_4:27890873-27890892 Msa1321740:five_prime_UTR 35.0%
ATATTATCAAGCCACTGCAA+GGG + chr8_4:27890874-27890893 Msa1321740:five_prime_UTR 35.0%
AAAATTCATGACTGGAGCTT+TGG - chr8_4:27890924-27890943 None:intergenic 35.0%
CTTTCATTCCAATGTGGAAA+TGG + chr8_4:27891048-27891067 Msa1321740:five_prime_UTR 35.0%
ATTCCAATGTGGAAATGGAA+TGG + chr8_4:27891053-27891072 Msa1321740:five_prime_UTR 35.0%
TAACCATTCCATTTCCACAT+TGG - chr8_4:27891059-27891078 None:intergenic 35.0%
GTAATCTTATGCATTACCTG+GGG - chr8_4:27891164-27891183 None:intergenic 35.0%
TCTTATGCTCTTACCTTGAA+TGG + chr8_4:27891272-27891291 Msa1321740:five_prime_UTR 35.0%
CCATCTAGTCCAGAATATTT+GGG - chr8_4:27891300-27891319 None:intergenic 35.0%
ACCATCTAGTCCAGAATATT+TGG - chr8_4:27891301-27891320 None:intergenic 35.0%
TCAACATTCGAAAATAGAGG+TGG - chr8_4:27891497-27891516 None:intergenic 35.0%
! TTAAGGACTAATGGAGCATT+AGG - chr8_4:27891603-27891622 None:intergenic 35.0%
TAATGCTCCATTAGTCCTTA+AGG + chr8_4:27891602-27891621 Msa1321740:five_prime_UTR 35.0%
AATGCTCCATTAGTCCTTAA+GGG + chr8_4:27891603-27891622 Msa1321740:five_prime_UTR 35.0%
ATGTACAAGTGATTCCCTTA+AGG - chr8_4:27891620-27891639 None:intergenic 35.0%
GTACATTTAAAGGAGGAAGT+AGG + chr8_4:27891634-27891653 Msa1321740:five_prime_UTR 35.0%
! TGAAAAGAGTTGGTTCTTGA+GGG - chr8_4:27891812-27891831 None:intergenic 35.0%
! TTGAAAAGAGTTGGTTCTTG+AGG - chr8_4:27891813-27891832 None:intergenic 35.0%
! TCAAGAACCAACTCTTTTCA+AGG + chr8_4:27891812-27891831 Msa1321740:five_prime_UTR 35.0%
! CAAGAACCAACTCTTTTCAA+GGG + chr8_4:27891813-27891832 Msa1321740:five_prime_UTR 35.0%
TGTACTCAGACGATGAAATA+TGG + chr8_4:27891868-27891887 Msa1321740:exon 35.0%
TGTAGAGAAATGTCAGCTTA+AGG + chr8_4:27892011-27892030 Msa1321740:intron 35.0%
!! GAGGAACAGAATTCTTGTTT+TGG + chr8_4:27892325-27892344 Msa1321740:CDS 35.0%
AGAATGCACAGTTATAACTG+TGG + chr8_4:27892418-27892437 Msa1321740:CDS 35.0%
ATGTCACTGTCTATTACAGT+TGG - chr8_4:27892455-27892474 None:intergenic 35.0%
AACTGTAATAGACAGTGACA+TGG + chr8_4:27892454-27892473 Msa1321740:CDS 35.0%
GCAGAGAAGAATAAGGATTA+AGG - chr8_4:27892509-27892528 None:intergenic 35.0%
AAACCAGCCAAAAATTACGA+GGG - chr8_4:27892560-27892579 None:intergenic 35.0%
AAAACCAGCCAAAAATTACG+AGG - chr8_4:27892561-27892580 None:intergenic 35.0%
!!! GCTGGTTTTTAAAGGGAAAA+TGG + chr8_4:27892572-27892591 Msa1321740:intron 35.0%
!! GGTTTTTAAAGGGAAAATGG+TGG + chr8_4:27892575-27892594 Msa1321740:intron 35.0%
ATTACCTTCCAAATATCAGC+AGG + chr8_4:27892682-27892701 Msa1321740:CDS 35.0%
!! TGCTCATAAATTCTGAAGTG+TGG - chr8_4:27892771-27892790 None:intergenic 35.0%
TGCTTCATCTTCGGAAACAA+GGG - chr8_4:27888034-27888053 None:intergenic 40.0%
TTGCTTCATCTTCGGAAACA+AGG - chr8_4:27888035-27888054 None:intergenic 40.0%
TTCCGAAGATGAAGCAAACA+TGG + chr8_4:27888038-27888057 Msa1321740:five_prime_UTR 40.0%
AGCCATGTTTGCTTCATCTT+CGG - chr8_4:27888043-27888062 None:intergenic 40.0%
AGTCGGTATCTCAAAGACAT+TGG + chr8_4:27888325-27888344 Msa1321740:five_prime_UTR 40.0%
!!! TTTTTTAACTCGAGGAGGTC+AGG + chr8_4:27888348-27888367 Msa1321740:five_prime_UTR 40.0%
! GAAAATGAGATCAGCTCTGA+TGG + chr8_4:27888374-27888393 Msa1321740:five_prime_UTR 40.0%
GATGGAAAGAACAAGTTGCA+AGG - chr8_4:27888541-27888560 None:intergenic 40.0%
!! ATAAGAAGAGGCACTAAACC+AGG - chr8_4:27888600-27888619 None:intergenic 40.0%
TGCGCGATAAAGAGTTCATA+TGG + chr8_4:27888787-27888806 Msa1321740:five_prime_UTR 40.0%
GAAATGAACCAGAAGCTTTC+AGG - chr8_4:27888830-27888849 None:intergenic 40.0%
ACAACAGCAGAAACCATAGT+AGG - chr8_4:27888867-27888886 None:intergenic 40.0%
TCATATTGGATAGAGCCTCT+GGG - chr8_4:27888992-27889011 None:intergenic 40.0%
ATCATATTGGATAGAGCCTC+TGG - chr8_4:27888993-27889012 None:intergenic 40.0%
! GATGATTTTCCAGATCCAAC+TGG - chr8_4:27889227-27889246 None:intergenic 40.0%
GGAAAACAGGTTAATGTAGG+TGG + chr8_4:27889382-27889401 Msa1321740:intron 40.0%
CTTACAGAAATAGGTCAGAG+AGG + chr8_4:27889559-27889578 Msa1321740:five_prime_UTR 40.0%
! CATTCTGGTTACTCATCAAG+TGG + chr8_4:27889815-27889834 Msa1321740:five_prime_UTR 40.0%
CTCAGAAGTCGATACTATCT+TGG + chr8_4:27889845-27889864 Msa1321740:five_prime_UTR 40.0%
TGCACTCACAAGTAGTTCAA+AGG - chr8_4:27890005-27890024 None:intergenic 40.0%
TTGTCTAATCCTCAGAGTGA+AGG + chr8_4:27890091-27890110 Msa1321740:intron 40.0%
!! AGGAGAGATTTCTAGCATCA+AGG + chr8_4:27890111-27890130 Msa1321740:five_prime_UTR 40.0%
!! GGAGAGATTTCTAGCATCAA+GGG + chr8_4:27890112-27890131 Msa1321740:five_prime_UTR 40.0%
TGTGTAAGTTGTGCACCAAT+TGG - chr8_4:27890139-27890158 None:intergenic 40.0%
ACACAACATCAATGTCCCTT+TGG - chr8_4:27890224-27890243 None:intergenic 40.0%
AGGGACATTGATGTTGTGTT+TGG + chr8_4:27890225-27890244 Msa1321740:five_prime_UTR 40.0%
! TGCAGACTTCATCGAACTTT+TGG + chr8_4:27890278-27890297 Msa1321740:five_prime_UTR 40.0%
!! AAGGTGGCATCAGTTACTTT+TGG - chr8_4:27890325-27890344 None:intergenic 40.0%
TGCATAAACTCCAATCAAGG+TGG - chr8_4:27890341-27890360 None:intergenic 40.0%
! GTCTTACTTTGCTGCACTTT+TGG + chr8_4:27890399-27890418 Msa1321740:five_prime_UTR 40.0%
! TGAAGCCTGCATTTTCAAAG+AGG - chr8_4:27890607-27890626 None:intergenic 40.0%
AATTGCTACAATTGCCACAC+AGG - chr8_4:27890673-27890692 None:intergenic 40.0%
TTGTGATTGCTTCAGTCACA+TGG + chr8_4:27890712-27890731 Msa1321740:five_prime_UTR 40.0%
AAAGGTAAGACCATTCAGCT+AGG + chr8_4:27890812-27890831 Msa1321740:intron 40.0%
AGGGAACTAATACGGATCAA+TGG + chr8_4:27890893-27890912 Msa1321740:five_prime_UTR 40.0%
TACTGTACGAGCATTCAACA+TGG + chr8_4:27890970-27890989 Msa1321740:five_prime_UTR 40.0%
AAGAAAGAGACAATCCCACA+CGG - chr8_4:27891256-27891275 None:intergenic 40.0%
GAATATTTGGGCTCCATTCA+AGG - chr8_4:27891288-27891307 None:intergenic 40.0%
TGAATGGAGCCCAAATATTC+TGG + chr8_4:27891288-27891307 Msa1321740:five_prime_UTR 40.0%
! CCCAAATATTCTGGACTAGA+TGG + chr8_4:27891297-27891316 Msa1321740:five_prime_UTR 40.0%
TTGAAGATCAATGTTGCCCT+TGG - chr8_4:27891438-27891457 None:intergenic 40.0%
AAGGGCAACATTGATCTTCA+AGG + chr8_4:27891437-27891456 Msa1321740:five_prime_UTR 40.0%
CATTGATCTTCAAGGCTTAG+AGG + chr8_4:27891445-27891464 Msa1321740:five_prime_UTR 40.0%
GTGGAAAAGAAGACAAAGGA+TGG - chr8_4:27891478-27891497 None:intergenic 40.0%
AGAGGTGGAAAAGAAGACAA+AGG - chr8_4:27891482-27891501 None:intergenic 40.0%
GCGTCAACATTCGAAAATAG+AGG - chr8_4:27891500-27891519 None:intergenic 40.0%
GTGATTCCCTTAAGGACTAA+TGG - chr8_4:27891612-27891631 None:intergenic 40.0%
TTTAAAGGAGGAAGTAGGGT+CGG + chr8_4:27891639-27891658 Msa1321740:five_prime_UTR 40.0%
GGATGAACATTCGCTCAATA+GGG + chr8_4:27891754-27891773 Msa1321740:five_prime_UTR 40.0%
CTCAGACGATGAAATATGGA+AGG + chr8_4:27891872-27891891 Msa1321740:exon 40.0%
AGCTTCAATGTGATAGAAGC+CGG - chr8_4:27892151-27892170 None:intergenic 40.0%
AGTTATGCAGTGAGTGATGA+AGG + chr8_4:27892245-27892264 Msa1321740:intron 40.0%
TGAGTGATGAAGGTGGAAAT+TGG + chr8_4:27892255-27892274 Msa1321740:CDS 40.0%
TCTTTGTAGAATGGCATCTG+TGG - chr8_4:27892378-27892397 None:intergenic 40.0%
AATAGACAGTGACATGGTCA+TGG + chr8_4:27892460-27892479 Msa1321740:CDS 40.0%
ATGGTCATGGTCCTATCTTA+TGG + chr8_4:27892473-27892492 Msa1321740:CDS 40.0%
! ATCCACTCCCTCGTAATTTT+TGG + chr8_4:27892550-27892569 Msa1321740:intron 40.0%
TGACGAACCTTCAAAGCTAA+TGG + chr8_4:27892602-27892621 Msa1321740:CDS 40.0%
CAGCTTAGAGAATGAAGAGT+CGG - chr8_4:27892631-27892650 None:intergenic 40.0%
CTAAGCTGGTAGCTGAATAT+TGG + chr8_4:27892643-27892662 Msa1321740:CDS 40.0%
TGATGCTTCCTGCTGATATT+TGG - chr8_4:27892693-27892712 None:intergenic 40.0%
GGAATGTCTTCAAGAGCTAG+TGG - chr8_4:27888009-27888028 None:intergenic 45.0%
TCATCTTCGGAAACAAGGGA+AGG - chr8_4:27888030-27888049 None:intergenic 45.0%
! GGGAATCACTTGTTAGAGAG+AGG + chr8_4:27888085-27888104 Msa1321740:five_prime_UTR 45.0%
! AATGAGATCAGCTCTGATGG+TGG + chr8_4:27888377-27888396 Msa1321740:five_prime_UTR 45.0%
!! GCAGCTAAAGCTTTCTAGCT+CGG + chr8_4:27888413-27888432 Msa1321740:five_prime_UTR 45.0%
!! TAAAGCTTTCTAGCTCGGCA+AGG + chr8_4:27888418-27888437 Msa1321740:five_prime_UTR 45.0%
GAATGGGAGAATTTCCATGG+TGG + chr8_4:27888493-27888512 Msa1321740:five_prime_UTR 45.0%
ACCTGTTAGAACTATCCCAG+AGG + chr8_4:27888974-27888993 Msa1321740:five_prime_UTR 45.0%
ATTGCAGTTTGTGGACCAGT+TGG + chr8_4:27889209-27889228 Msa1321740:five_prime_UTR 45.0%
GGAGAGATCCCTAAGATTTC+AGG + chr8_4:27889266-27889285 Msa1321740:five_prime_UTR 45.0%
CAGAGAGGGATTAACATGAG+TGG + chr8_4:27889574-27889593 Msa1321740:five_prime_UTR 45.0%
AGAGGGATTAACATGAGTGG+AGG + chr8_4:27889577-27889596 Msa1321740:five_prime_UTR 45.0%
TGAGTGGAGGACAAAAGCAA+AGG + chr8_4:27889590-27889609 Msa1321740:five_prime_UTR 45.0%
TGAGCATCAACTGCACTGAA+AGG - chr8_4:27889670-27889689 None:intergenic 45.0%
! CAAAGGCTGTTCCAGCTTTT+AGG - chr8_4:27889988-27890007 None:intergenic 45.0%
GAAATCTCTCCTTCACTCTG+AGG - chr8_4:27890103-27890122 None:intergenic 45.0%
TCTAGCATCAAGGGTCCAAT+TGG + chr8_4:27890121-27890140 Msa1321740:five_prime_UTR 45.0%
TGGTGCACAACTTACACAAG+AGG + chr8_4:27890141-27890160 Msa1321740:five_prime_UTR 45.0%
ATGTTGGATGGAAGCCACTT+TGG + chr8_4:27890182-27890201 Msa1321740:five_prime_UTR 45.0%
! TGTTGGATGGAAGCCACTTT+GGG + chr8_4:27890183-27890202 Msa1321740:five_prime_UTR 45.0%
GTAACTGATGCCACCTTGAT+TGG + chr8_4:27890328-27890347 Msa1321740:five_prime_UTR 45.0%
TACAATTGCCACACAGGTGA+GGG - chr8_4:27890667-27890686 None:intergenic 45.0%
! CATTGTTGCTGTTCCTGCAA+TGG + chr8_4:27890743-27890762 Msa1321740:five_prime_UTR 45.0%
CCACTGCAAGGGAACTAATA+CGG + chr8_4:27890885-27890904 Msa1321740:five_prime_UTR 45.0%
! ATTCATGACTGGAGCTTTGG+TGG - chr8_4:27890921-27890940 None:intergenic 45.0%
TCGGCTGCAAAATTCATGAC+TGG - chr8_4:27890932-27890951 None:intergenic 45.0%
CCTGGGGATAGATATCTTTG+AGG - chr8_4:27891148-27891167 None:intergenic 45.0%
CCTCAAAGATATCTATCCCC+AGG + chr8_4:27891145-27891164 Msa1321740:five_prime_UTR 45.0%
AGGTCGGTTATGATCCACAA+CGG - chr8_4:27891399-27891418 None:intergenic 45.0%
ATAACCGACCTCCATCTTCA+TGG + chr8_4:27891408-27891427 Msa1321740:five_prime_UTR 45.0%
AGATCAATGTTGCCCTTGGA+AGG - chr8_4:27891434-27891453 None:intergenic 45.0%
CGTTTAGTTGAGCCTTCAAG+AGG + chr8_4:27891714-27891733 Msa1321740:five_prime_UTR 45.0%
GGGATGAACATTCGCTCAAT+AGG + chr8_4:27891753-27891772 Msa1321740:five_prime_UTR 45.0%
CATTCGCTCAATAGGGTTGA+AGG + chr8_4:27891761-27891780 Msa1321740:five_prime_UTR 45.0%
ATGCTGCCCTTGAAAAGAGT+TGG - chr8_4:27891822-27891841 None:intergenic 45.0%
TATGCAGTGAGTGATGAAGG+TGG + chr8_4:27892248-27892267 Msa1321740:intron 45.0%
TGAAGGTGGAAATTGGAGCT+TGG + chr8_4:27892262-27892281 Msa1321740:CDS 45.0%
GAAGGTGGAAATTGGAGCTT+GGG + chr8_4:27892263-27892282 Msa1321740:CDS 45.0%
AGCCAAAAATTACGAGGGAG+TGG - chr8_4:27892555-27892574 None:intergenic 45.0%
!!! ACTCCCTCGTAATTTTTGGC+TGG + chr8_4:27892554-27892573 Msa1321740:intron 45.0%
CGACTCTTCATTCTCTAAGC+TGG + chr8_4:27892629-27892648 Msa1321740:CDS 45.0%
AAGGTAATTCTTCCTGCAGC+TGG - chr8_4:27892670-27892689 None:intergenic 45.0%
GCTTCCTGCTGATATTTGGA+AGG - chr8_4:27892689-27892708 None:intergenic 45.0%
!! GTTGGTATTGGTGCTCTTCC+TGG + chr8_4:27888579-27888598 Msa1321740:five_prime_UTR 50.0%
GCACAGATCCTGAAAGCTTC+TGG + chr8_4:27888819-27888838 Msa1321740:five_prime_UTR 50.0%
!! GCCTCTGGGATAGTTCTAAC+AGG - chr8_4:27888978-27888997 None:intergenic 50.0%
GTTTGTGGACCAGTTGGATC+TGG + chr8_4:27889215-27889234 Msa1321740:five_prime_UTR 50.0%
CTGCACTGAAAGGATCATCG+AGG - chr8_4:27889660-27889679 None:intergenic 50.0%
ACCTTATTCCCTCACCTGTG+TGG + chr8_4:27890656-27890675 Msa1321740:five_prime_UTR 50.0%
CTACAATTGCCACACAGGTG+AGG - chr8_4:27890668-27890687 None:intergenic 50.0%
CCGTATTAGTTCCCTTGCAG+TGG - chr8_4:27890888-27890907 None:intergenic 50.0%
AACCACTCCAAGCGATGTCT+CGG - chr8_4:27890951-27890970 None:intergenic 50.0%
GAAATTCTCCTGTTCTGCGC+AGG + chr8_4:27891230-27891249 Msa1321740:intron 50.0%
TTATGATCCACAACGGCAGG+AGG - chr8_4:27891392-27891411 None:intergenic 50.0%
AAGGCCATGAAGATGGAGGT+CGG - chr8_4:27891415-27891434 None:intergenic 50.0%
TTGGAAGGCCATGAAGATGG+AGG - chr8_4:27891419-27891438 None:intergenic 50.0%
TCCATCTTCATGGCCTTCCA+AGG + chr8_4:27891418-27891437 Msa1321740:five_prime_UTR 50.0%
CCATCTTCATGGCCTTCCAA+GGG + chr8_4:27891419-27891438 Msa1321740:five_prime_UTR 50.0%
GTTGTTGGAAGGACTGGAAG+TGG + chr8_4:27891663-27891682 Msa1321740:five_prime_UTR 50.0%
GGGCAGCATTAGAACAAACC+TGG + chr8_4:27891833-27891852 Msa1321740:five_prime_UTR 50.0%
AGAACAAACCTGGACCCACT+AGG + chr8_4:27891843-27891862 Msa1321740:five_prime_UTR 50.0%
CGTCTGAGTACAGACCTAGT+GGG - chr8_4:27891860-27891879 None:intergenic 50.0%
TCGTCTGAGTACAGACCTAG+TGG - chr8_4:27891861-27891880 None:intergenic 50.0%
CAGCAAGCTACCAAGTCTCT+TGG + chr8_4:27892041-27892060 Msa1321740:intron 50.0%
CCAGAAGAGTCCAAGAGACT+TGG - chr8_4:27892054-27892073 None:intergenic 50.0%
CCAAGTCTCTTGGACTCTTC+TGG + chr8_4:27892051-27892070 Msa1321740:intron 50.0%
GGACTCTTCTGGTCAGTCTT+TGG + chr8_4:27892062-27892081 Msa1321740:intron 50.0%
GGCATCTGTGGCTGAATCAA+TGG - chr8_4:27892366-27892385 None:intergenic 50.0%
!! TCGGCGTCCATTAGCTTTGA+AGG - chr8_4:27892612-27892631 None:intergenic 50.0%
CTGAATATTGGTCCAGCTGC+AGG + chr8_4:27892655-27892674 Msa1321740:CDS 50.0%
CTCGGCAAGGACAAGACACT+CGG + chr8_4:27888431-27888450 Msa1321740:five_prime_UTR 55.0%
GCCACACAGGTGAGGGAATA+AGG - chr8_4:27890660-27890679 None:intergenic 55.0%
TTTGCAGCCGAGACATCGCT+TGG + chr8_4:27890941-27890960 Msa1321740:five_prime_UTR 55.0%
CGGTTATGATCCACAACGGC+AGG - chr8_4:27891395-27891414 None:intergenic 55.0%
CCCTTGGAAGGCCATGAAGA+TGG - chr8_4:27891422-27891441 None:intergenic 55.0%
GGAAGTAGGGTCGGAGTTGT+TGG + chr8_4:27891648-27891667 Msa1321740:five_prime_UTR 55.0%
GTAGGGTCGGAGTTGTTGGA+AGG + chr8_4:27891652-27891671 Msa1321740:five_prime_UTR 55.0%
GTCGGAGTTGTTGGAAGGAC+TGG + chr8_4:27891657-27891676 Msa1321740:five_prime_UTR 55.0%
! AGTACAGACCTAGTGGGTCC+AGG - chr8_4:27891854-27891873 None:intergenic 55.0%
ACGAGGGAGTGGATAGTGCT+AGG - chr8_4:27892544-27892563 None:intergenic 55.0%
GCAAGGACAAGACACTCGGC+CGG + chr8_4:27888435-27888454 Msa1321740:five_prime_UTR 60.0%
AGCCGAGACATCGCTTGGAG+TGG + chr8_4:27890946-27890965 Msa1321740:five_prime_UTR 60.0%
CTGTTCTGCGCAGGCCGTGT+GGG + chr8_4:27891239-27891258 Msa1321740:intron 65.0%
ACAACGGCAGGAGGCTCAGC+TGG - chr8_4:27891383-27891402 None:intergenic 65.0%
AGCTGAGCCTCCTGCCGTTG+TGG + chr8_4:27891382-27891401 Msa1321740:five_prime_UTR 65.0%
CCACACGGCCTGCGCAGAAC+AGG - chr8_4:27891241-27891260 None:intergenic 70.0%
CCTGTTCTGCGCAGGCCGTG+TGG + chr8_4:27891238-27891257 Msa1321740:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 27887309 27892916 27887309 ID=Msa1321740;Name=Msa1321740
chr8_4 mRNA 27887309 27892916 27887309 ID=Msa1321740-mRNA-1;Parent=Msa1321740;Name=Msa1321740-mRNA-1;_AED=0.09;_eAED=0.09;_QI=3989|0.9|1|1|0.8|0.63|11|127|125
chr8_4 exon 27887309 27889292 27887309 ID=Msa1321740-mRNA-1:exon:9388;Parent=Msa1321740-mRNA-1
chr8_4 exon 27889391 27889711 27889391 ID=Msa1321740-mRNA-1:exon:9389;Parent=Msa1321740-mRNA-1
chr8_4 exon 27889780 27890069 27889780 ID=Msa1321740-mRNA-1:exon:9390;Parent=Msa1321740-mRNA-1
chr8_4 exon 27890106 27890525 27890106 ID=Msa1321740-mRNA-1:exon:9391;Parent=Msa1321740-mRNA-1
chr8_4 exon 27890621 27890785 27890621 ID=Msa1321740-mRNA-1:exon:9392;Parent=Msa1321740-mRNA-1
chr8_4 exon 27890872 27891166 27890872 ID=Msa1321740-mRNA-1:exon:9393;Parent=Msa1321740-mRNA-1
chr8_4 exon 27891252 27891466 27891252 ID=Msa1321740-mRNA-1:exon:9394;Parent=Msa1321740-mRNA-1
chr8_4 exon 27891588 27891893 27891588 ID=Msa1321740-mRNA-1:exon:9395;Parent=Msa1321740-mRNA-1
chr8_4 exon 27892255 27892494 27892255 ID=Msa1321740-mRNA-1:exon:9396;Parent=Msa1321740-mRNA-1
chr8_4 exon 27892586 27892743 27892586 ID=Msa1321740-mRNA-1:exon:9397;Parent=Msa1321740-mRNA-1
chr8_4 exon 27892817 27892916 27892817 ID=Msa1321740-mRNA-1:exon:9398;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27887309 27889292 27887309 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27889391 27889711 27889391 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27889780 27890069 27889780 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27890106 27890525 27890106 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27890621 27890785 27890621 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27890872 27891166 27890872 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27891252 27891466 27891252 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 five_prime_UTR 27891588 27891886 27891588 ID=Msa1321740-mRNA-1:five_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 CDS 27891887 27891893 27891887 ID=Msa1321740-mRNA-1:cds;Parent=Msa1321740-mRNA-1
chr8_4 CDS 27892255 27892494 27892255 ID=Msa1321740-mRNA-1:cds;Parent=Msa1321740-mRNA-1
chr8_4 CDS 27892586 27892716 27892586 ID=Msa1321740-mRNA-1:cds;Parent=Msa1321740-mRNA-1
chr8_4 three_prime_UTR 27892717 27892743 27892717 ID=Msa1321740-mRNA-1:three_prime_utr;Parent=Msa1321740-mRNA-1
chr8_4 three_prime_UTR 27892817 27892916 27892817 ID=Msa1321740-mRNA-1:three_prime_utr;Parent=Msa1321740-mRNA-1
Gene Sequence

>Msa1321740

ATGGAAGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGCCAATTGTTTTGCCTCGGAAGAGTTCTACTTAAGAGGAACAGAATTCTTGTTTTGGATGAAGCTACTGCATCCATTGATTCAGCCACAGATGCCATTCTACAAAGAATAATTAGACAAGAATTTGAAGAATGCACAGTTATAACTGTGGCTCATAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTATCTTATGGGAAAATGGTGGAATATGACGAACCTTCAAAGCTAATGGACGCCGACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCCAGCTGCAGGAAGAATTACCTTCCAAATATCAGCAGGAAGCATCAATGA
Protein sequence

>Msa1321740

MEVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKMVEYDEPSKLMDADSSFSKLVAEYWSSCRKNYLPNISRKHQ*