AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0823300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823300 MtrunA17_Chr5g0443561 96.904 323 10 0 1 323 1 323 0.0 641
Msa0823300 MtrunA17_Chr7g0256571 69.231 364 65 3 7 323 6 369 6.26e-179 499
Msa0823300 MtrunA17_Chr7g0256581 68.681 364 67 3 7 323 6 369 4.78e-177 494
Msa0823300 MtrunA17_Chr7g0256561 73.926 326 81 2 1 323 11 335 1.02e-175 489
Msa0823300 MtrunA17_Chr2g0322241 48.295 352 128 7 23 323 47 395 9.17e-105 311
Msa0823300 MtrunA17_Chr4g0025341 46.439 351 135 7 23 323 44 391 8.02e-98 294
Msa0823300 MtrunA17_Chr2g0329531 46.203 316 119 5 48 313 82 396 1.41e-86 266
Msa0823300 MtrunA17_Chr7g0256601 42.771 332 136 6 45 322 85 416 1.15e-85 264
Msa0823300 MtrunA17_Chr7g0256591 40.922 347 151 6 30 322 39 385 1.80e-85 262
Msa0823300 MtrunA17_Chr4g0062001 39.650 343 175 4 1 321 2 334 6.62e-79 244
Msa0823300 MtrunA17_Chr8g0376581 41.216 296 154 3 47 322 36 331 2.69e-74 232
Msa0823300 MtrunA17_Chr4g0062031 41.869 289 155 5 47 322 37 325 1.47e-72 227
Msa0823300 MtrunA17_Chr4g0062021 41.156 294 149 5 47 317 50 342 6.54e-69 218
Msa0823300 MtrunA17_Chr2g0307721 44.295 298 145 4 38 314 37 334 2.10e-67 225
Msa0823300 MtrunA17_Chr2g0307721 40.176 341 176 8 5 320 455 792 5.40e-62 210
Msa0823300 MtrunA17_Chr2g0307721 44.304 79 44 0 100 178 343 421 1.43e-13 71.6
Msa0823300 MtrunA17_Chr4g0020271 38.251 183 92 3 153 315 2 183 1.49e-35 127
Msa0823300 MtrunA17_Chr8g0370791 35.371 229 127 5 48 276 78 285 3.05e-33 126
Msa0823300 MtrunA17_Chr8g0370761 34.783 230 127 6 48 276 78 285 2.50e-32 123
Msa0823300 MtrunA17_Chr4g0062051 45.185 135 71 1 47 178 41 175 1.25e-31 117
Msa0823300 MtrunA17_Chr4g0061871 44.762 105 58 0 178 282 18 122 5.31e-26 100
Msa0823300 MtrunA17_Chr2g0300841 31.048 248 129 6 116 323 112 357 3.56e-23 98.2
Msa0823300 MtrunA17_Chr2g0300851 30.242 248 130 6 116 323 105 349 4.29e-22 95.1
Msa0823300 MtrunA17_Chr2g0300861 31.557 244 124 7 116 319 124 364 2.11e-21 93.6
Msa0823300 MtrunA17_Chr8g0370771 33.333 135 89 1 142 276 17 150 1.01e-20 89.4
Msa0823300 MtrunA17_Chr4g0062061 38.462 117 61 2 217 322 4 120 1.39e-20 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823300 AT3G57030.1 56.522 345 107 2 22 323 30 374 1.73e-137 394
Msa0823300 AT5G22020.3 47.507 341 128 5 31 323 58 395 2.31e-99 298
Msa0823300 AT5G22020.1 47.507 341 128 5 31 323 58 395 2.31e-99 298
Msa0823300 AT5G22020.2 47.507 341 128 5 31 323 58 395 2.31e-99 298
Msa0823300 AT1G08470.1 46.000 350 135 7 24 323 44 389 8.55e-99 296
Msa0823300 AT3G57010.1 44.475 362 148 8 7 320 11 367 5.24e-89 271
Msa0823300 AT2G41290.1 44.444 369 149 9 10 323 9 376 2.41e-88 270
Msa0823300 AT2G41300.1 45.806 310 122 4 54 320 84 390 8.58e-87 266
Msa0823300 AT3G57020.1 43.503 354 150 7 13 320 17 366 1.33e-86 265
Msa0823300 AT3G57020.2 42.090 354 141 7 13 320 17 352 2.73e-80 248
Msa0823300 AT3G59530.3 50.206 243 112 2 39 273 75 316 7.12e-78 243
Msa0823300 AT3G59530.2 50.206 243 112 2 39 273 75 316 7.12e-78 243
Msa0823300 AT3G59530.1 50.206 243 112 2 39 273 75 316 7.12e-78 243
Msa0823300 AT1G74020.1 41.297 293 152 6 48 323 38 327 2.80e-65 209
Msa0823300 AT1G74010.1 39.932 293 155 7 48 323 37 325 3.89e-61 198
Msa0823300 AT1G74000.1 38.776 294 160 7 47 323 39 329 1.34e-59 194
Msa0823300 AT3G51430.1 32.171 258 155 6 24 280 45 283 1.16e-30 119
Msa0823300 AT3G51430.2 30.797 276 170 7 24 297 45 301 1.31e-30 119
Msa0823300 AT3G51440.1 32.422 256 150 7 49 300 70 306 2.30e-30 118
Msa0823300 AT3G51450.1 31.760 233 139 6 49 280 70 283 1.58e-28 113
Msa0823300 AT3G51420.1 31.416 226 135 6 49 273 70 276 6.67e-27 109

Find 92 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATACAATATACTCTTTC+TGG 0.161342 5_3:-61959285 Msa0823300:three_prime_UTR
ATTCTTCGACTTTGGCTTCA+TGG 0.205561 5_3:-61959554 Msa0823300:CDS
TAGGTGAAACTTCGACTTTC+CGG 0.217649 5_3:-61959577 Msa0823300:CDS
GAAATTCAGATGGGCAGTTT+TGG 0.258450 5_3:-61959469 Msa0823300:CDS
CTGTCCTTTGATCCAGAAAT+TGG 0.265268 5_3:+61962881 None:intergenic
TCAATGACAAAATATCTTAA+TGG 0.309301 5_3:-61958860 Msa0823300:three_prime_UTR
CTTTCCGGATTCTTCGACTT+TGG 0.322440 5_3:-61959562 Msa0823300:CDS
ATATTGACTTGGCCAGCATT+AGG 0.334062 5_3:+61959530 None:intergenic
CTTCTTAGCGGAGACAAAAC+TGG 0.347076 5_3:-61959707 Msa0823300:CDS
TCCATTCGCACCAGAGTTAG+AGG 0.369138 5_3:-61960314 Msa0823300:CDS
CAGGTTATCCGGACAATATA+AGG 0.377879 5_3:-61959493 Msa0823300:CDS
TGCTGTTCTTCCAGGTTATC+CGG 0.385672 5_3:-61959504 Msa0823300:CDS
TATTGACTTGGCCAGCATTA+GGG 0.387491 5_3:+61959531 None:intergenic
CAAAATATCTTAATGGAGTT+CGG 0.415781 5_3:-61958853 Msa0823300:three_prime_UTR
CTCCATGTCACCGGAGCCGT+TGG 0.420609 5_3:-61962839 Msa0823300:CDS
TGGCTTCATGGCCCTAATGC+TGG 0.424712 5_3:-61959542 Msa0823300:CDS
GACGGTTTATTTCTTCTAGT+AGG 0.425500 5_3:-61959596 Msa0823300:CDS
CCATCCGCCACGCCCGTGTA+TGG 0.430401 5_3:+61962779 None:intergenic
GCTATAAAGTTGAGTGATGA+AGG 0.432202 5_3:-61959428 Msa0823300:CDS
TTGCTGTCACTAGTTCCAAT+AGG 0.439270 5_3:-61962712 Msa0823300:intron
CTTATATTGTCCGGATAACC+TGG 0.443834 5_3:+61959494 None:intergenic
CCAGAGTTAGAGGATATTTG+TGG 0.459327 5_3:-61960304 Msa0823300:CDS
GAATTTCTCCTTATATTGTC+CGG 0.460285 5_3:+61959485 None:intergenic
ACTCTCCGGCCCAACGGCTC+CGG 0.460954 5_3:+61962829 None:intergenic
TTGCTTAAACAAACACCGTT+GGG 0.463178 5_3:+61959620 None:intergenic
AGTATTATACTACCCATGTC+AGG 0.474480 5_3:-61959125 Msa0823300:three_prime_UTR
TATATTGTTGATGCCTACCT+TGG 0.481015 5_3:-61960238 Msa0823300:CDS
GAAGTGAATGTCTTATTAAG+TGG 0.483610 5_3:-61959653 Msa0823300:CDS
TCCTCTAACTCTGGTGCGAA+TGG 0.487071 5_3:+61960313 None:intergenic
GAAGCCAAAGTCGAAGAATC+CGG 0.487945 5_3:+61959558 None:intergenic
AAACTATAAATACCAACATA+AGG 0.492238 5_3:+61959311 None:intergenic
GCCCAACGGCTCCGGTGACA+TGG 0.497514 5_3:+61962837 None:intergenic
CATTTATATTTAAATAATTG+TGG 0.500843 5_3:-61959009 Msa0823300:three_prime_UTR
TGGATCAAAGGACAGTCTCC+AGG 0.505663 5_3:-61962873 Msa0823300:CDS
CCACAAATATCCTCTAACTC+TGG 0.512177 5_3:+61960304 None:intergenic
CTGCAGGTCCTACTACGTTA+AGG 0.516853 5_3:+61960215 None:intergenic
TTTGCTTAAACAAACACCGT+TGG 0.522071 5_3:+61959619 None:intergenic
TAATGGAGTTCGGAAAATGT+AGG 0.522107 5_3:-61958843 Msa0823300:three_prime_UTR
GATATTTGTGGGAGGCCACT+AGG 0.524182 5_3:-61960292 Msa0823300:CDS
TCCATGTCACCGGAGCCGTT+GGG 0.527613 5_3:-61962838 Msa0823300:CDS
TAATTACAATTGAGATCAGA+TGG 0.530538 5_3:-61959148 Msa0823300:three_prime_UTR
TGTCACCGGAGCCGTTGGGC+CGG 0.534102 5_3:-61962834 Msa0823300:CDS
CTTAACGTAGTAGGACCTGC+AGG 0.540126 5_3:-61960214 Msa0823300:CDS
CCATACACGGGCGTGGCGGA+TGG 0.540541 5_3:-61962779 Msa0823300:CDS
ACACGGGCGTGGCGGATGGA+CGG 0.542691 5_3:-61962775 Msa0823300:CDS
TTATCAAATCTTAGTCCTAG+TGG 0.547763 5_3:+61960277 None:intergenic
CGCTTCACTGACATATCTCA+TGG 0.548468 5_3:+61959376 None:intergenic
GGTTCCAATTTCTGGATCAA+AGG 0.550697 5_3:-61962885 Msa0823300:CDS
AATAAAAGAATCCCCTGACA+TGG 0.550973 5_3:+61959112 None:intergenic
TACCTTGGCCTTAACGTAGT+AGG 0.551747 5_3:-61960223 Msa0823300:CDS
ATGTCATTGTTGAAGCGAAA+GGG 0.551830 5_3:+61960151 None:intergenic
CAGAGTTAGAGGATATTTGT+GGG 0.555272 5_3:-61960303 Msa0823300:CDS
AGGGGAAATATTAGAAATCG+TGG 0.558229 5_3:-61959408 Msa0823300:CDS
CATGGAGTAACCGATCAGCC+TGG 0.564584 5_3:+61962855 None:intergenic
AAGTGAATGTCTTATTAAGT+GGG 0.566171 5_3:-61959652 Msa0823300:CDS
AGGACAGTCTCCAGGCTGAT+CGG 0.569322 5_3:-61962865 Msa0823300:CDS
CTTTCGCTTCAACAATGACA+TGG 0.569375 5_3:-61960149 Msa0823300:CDS
GTAATGGGGAGTAATTATGT+TGG 0.576359 5_3:-61959072 Msa0823300:three_prime_UTR
AAGTATGAAGGGGAGGAACG+TGG 0.583448 5_3:-61962746 Msa0823300:CDS
GGTGTTTGTTTAAGCAAAGA+CGG 0.590239 5_3:-61959614 Msa0823300:CDS
TATAAAGTTGAGTGATGAAG+GGG 0.593424 5_3:-61959426 Msa0823300:CDS
CAAGCACAGTCTATCAGAGA+AGG 0.594605 5_3:-61960087 Msa0823300:intron
CGAAGGACCATACACGGGCG+TGG 0.595027 5_3:-61962786 Msa0823300:CDS
GTCCTACTACGTTAAGGCCA+AGG 0.595729 5_3:+61960221 None:intergenic
GTATTATACTACCCATGTCA+GGG 0.600144 5_3:-61959124 Msa0823300:three_prime_UTR
AATATAAGGAGAAATTCAGA+TGG 0.600334 5_3:-61959479 Msa0823300:CDS
GAAATATTAGAAATCGTGGA+AGG 0.606501 5_3:-61959404 Msa0823300:CDS
AGTGGGCTTAATTATCCCAA+CGG 0.610826 5_3:-61959635 Msa0823300:CDS
ATGAAGGGGAGGAACGTGGT+TGG 0.613290 5_3:-61962742 Msa0823300:CDS
TCACGGCGAAGGACCATACA+CGG 0.616572 5_3:-61962792 Msa0823300:CDS
GATCGGTTACTCCATGTCAC+CGG 0.620224 5_3:-61962848 Msa0823300:CDS
AGCTTCTGTTGCTAACTGTG+TGG 0.621050 5_3:+61960183 None:intergenic
TCGGTGTTAATGCCTTATGT+TGG 0.621568 5_3:-61959323 Msa0823300:CDS
GTGCAAGAAAAGTTGCAGCA+TGG 0.622116 5_3:+61962939 None:intergenic
CTATAAAGTTGAGTGATGAA+GGG 0.622219 5_3:-61959427 Msa0823300:CDS
AACAAGACTCTCCGGCCCAA+CGG 0.631984 5_3:+61962823 None:intergenic
CATGTCATTGTTGAAGCGAA+AGG 0.635612 5_3:+61960150 None:intergenic
TTAACGTAGTAGGACCTGCA+GGG 0.641562 5_3:-61960213 Msa0823300:CDS
CATGAGATATGTCAGTGAAG+CGG 0.643807 5_3:-61959375 Msa0823300:CDS
ATAAAAGAATCCCCTGACAT+GGG 0.644321 5_3:+61959113 None:intergenic
ATGAGTTCAAACACGAACGA+AGG 0.656155 5_3:-61958952 Msa0823300:three_prime_UTR
TTAGCGGAGACAAAACTGGA+AGG 0.657390 5_3:-61959703 Msa0823300:CDS
CAGTTAGCAACAGAAGCTGA+AGG 0.659999 5_3:-61960178 Msa0823300:CDS
ATATAAGGAGAAATTCAGAT+GGG 0.667598 5_3:-61959478 Msa0823300:CDS
TCTCCGCTAAGAAGTAAAAG+CGG 0.672637 5_3:+61959716 None:intergenic
CACGGCGAAGGACCATACAC+GGG 0.675439 5_3:-61962791 Msa0823300:CDS
TACTACGTTAAGGCCAAGGT+AGG 0.676893 5_3:+61960225 None:intergenic
TATTATACTACCCATGTCAG+GGG 0.679685 5_3:-61959123 Msa0823300:three_prime_UTR
TAACGTAGTAGGACCTGCAG+GGG 0.691917 5_3:-61960212 Msa0823300:CDS
AGTTAGAGGATATTTGTGGG+AGG 0.696868 5_3:-61960300 Msa0823300:CDS
AGGACCATACACGGGCGTGG+CGG 0.702487 5_3:-61962783 Msa0823300:CDS
AACGTAGTAGGACCTGCAGG+GGG 0.714485 5_3:-61960211 Msa0823300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTATTAAAAAAAAAAT+TGG - chr5_3:61960147-61960166 Msa0823300:CDS 0.0%
!! AGGTAAAAATAAAATAAAAA+TGG - chr5_3:61959384-61959403 Msa0823300:CDS 10.0%
!! TTTGAAAAAAATATATAAGA+AGG + chr5_3:61959819-61959838 None:intergenic 10.0%
!!! TTTGAAAATTTTGAAAAATA+TGG + chr5_3:61959858-61959877 None:intergenic 10.0%
!!! AATTTTATGAAAATTTATAG+GGG + chr5_3:61959885-61959904 None:intergenic 10.0%
!!! CAATTTTATGAAAATTTATA+GGG + chr5_3:61959886-61959905 None:intergenic 10.0%
!!! ACAATTTTATGAAAATTTAT+AGG + chr5_3:61959887-61959906 None:intergenic 10.0%
!!! ATTTTCATAAAATTGTAAAT+TGG - chr5_3:61959891-61959910 Msa0823300:intron 10.0%
!!! TTTTCATAAAATTGTAAATT+GGG - chr5_3:61959892-61959911 Msa0823300:intron 10.0%
!!! TTTATAAATTCAAGATTTTT+GGG + chr5_3:61960023-61960042 None:intergenic 10.0%
!!! TTTTATAAATTCAAGATTTT+TGG + chr5_3:61960024-61960043 None:intergenic 10.0%
!!! TTTTAATAATTTAAAGTTCT+AGG + chr5_3:61960140-61960159 None:intergenic 10.0%
!!! TTTGGAATTTTAAAAATTTT+AGG + chr5_3:61960389-61960408 None:intergenic 10.0%
!!! ACTTTTGTAAAAAAAAAAAA+AGG + chr5_3:61960473-61960492 None:intergenic 10.0%
!!! TTCTTTATAAATAATTTGTT+TGG + chr5_3:61960536-61960555 None:intergenic 10.0%
!! CATTTATATTTAAATAATTG+TGG - chr5_3:61962822-61962841 Msa0823300:CDS 10.0%
!!! TTTTTGGTACAATTTAATTT+TGG - chr5_3:61959204-61959223 Msa0823300:intron 15.0%
!!! TTGTTATTTTTTAAAACTGA+GGG + chr5_3:61959918-61959937 None:intergenic 15.0%
!!! TTTGTTATTTTTTAAAACTG+AGG + chr5_3:61959919-61959938 None:intergenic 15.0%
!!! TTATAAATTCAAGATTTTTG+GGG + chr5_3:61960022-61960041 None:intergenic 15.0%
!!! AATTTCATTGTAATCATTTT+TGG + chr5_3:61960051-61960070 None:intergenic 15.0%
!! CAGTTATAAAAAAAATTGTT+TGG + chr5_3:61960088-61960107 None:intergenic 15.0%
!! AATTTGAAAATTGAAAAGTA+AGG + chr5_3:61960447-61960466 None:intergenic 15.0%
!!! AATGATTAATACTTTGTTTT+TGG - chr5_3:61961876-61961895 Msa0823300:intron 15.0%
!!! ATGATTAATACTTTGTTTTT+GGG - chr5_3:61961877-61961896 Msa0823300:intron 15.0%
!! ATTAAATTTGATCTATATGT+TGG - chr5_3:61962069-61962088 Msa0823300:intron 15.0%
!! TATTGAATAACTAATGTATT+TGG - chr5_3:61962603-61962622 Msa0823300:intron 15.0%
!!! TCTTAACTTTTTTAATGTAA+TGG - chr5_3:61962743-61962762 Msa0823300:CDS 15.0%
!!! CTTAACTTTTTTAATGTAAT+GGG - chr5_3:61962744-61962763 Msa0823300:CDS 15.0%
!!! TTAACTTTTTTAATGTAATG+GGG - chr5_3:61962745-61962764 Msa0823300:CDS 15.0%
!! ATTGATCATTCAAAAAAAAT+AGG - chr5_3:61962937-61962956 Msa0823300:CDS 15.0%
!! TTGATCATTCAAAAAAAATA+GGG - chr5_3:61962938-61962957 Msa0823300:CDS 15.0%
!! TTTCCAAATTCTTTCTTTAT+TGG - chr5_3:61959174-61959193 Msa0823300:three_prime_UTR 20.0%
!! ATACCAATAAAGAAAGAATT+TGG + chr5_3:61959180-61959199 None:intergenic 20.0%
!!! CTTTATTGGTATTCTTTTTT+TGG - chr5_3:61959188-61959207 Msa0823300:three_prime_UTR 20.0%
!! AATTTAGATTATTAGTGACT+AGG - chr5_3:61959300-61959319 Msa0823300:exon 20.0%
!! ATTTAGATTATTAGTGACTA+GGG - chr5_3:61959301-61959320 Msa0823300:exon 20.0%
!!! ATTTTTACCTAATAATCTAG+TGG + chr5_3:61959374-61959393 None:intergenic 20.0%
!!! ATATCGAGAAGTATATTTAA+GGG + chr5_3:61959499-61959518 None:intergenic 20.0%
!! TCGAGAATAGTTTATAATTA+TGG - chr5_3:61959520-61959539 Msa0823300:CDS 20.0%
!! CGAGAATAGTTTATAATTAT+GGG - chr5_3:61959521-61959540 Msa0823300:CDS 20.0%
!!! GAAATTTTGAAATTTGATAG+GGG + chr5_3:61959999-61960018 None:intergenic 20.0%
!!! GGAAATTTTGAAATTTGATA+GGG + chr5_3:61960000-61960019 None:intergenic 20.0%
!!! TATAAATTCAAGATTTTTGG+GGG + chr5_3:61960021-61960040 None:intergenic 20.0%
!!! ATTTTTCAAATTTTGCAAGT+TGG - chr5_3:61960292-61960311 Msa0823300:CDS 20.0%
!!! TTTTTCAAATTTTGCAAGTT+GGG - chr5_3:61960293-61960312 Msa0823300:CDS 20.0%
!! ACATCTTGAATAATTTATAG+GGG + chr5_3:61960355-61960374 None:intergenic 20.0%
!! CACATCTTGAATAATTTATA+GGG + chr5_3:61960356-61960375 None:intergenic 20.0%
!!! GCAAATTTTGAAAAAATTGA+GGG + chr5_3:61960416-61960435 None:intergenic 20.0%
!!! TGCAAATTTTGAAAAAATTG+AGG + chr5_3:61960417-61960436 None:intergenic 20.0%
!!! TTTTTTCAAAATTTGCAGTT+TGG - chr5_3:61960420-61960439 Msa0823300:intron 20.0%
!!! TAAATAATTTGTTTGGATAG+AGG + chr5_3:61960529-61960548 None:intergenic 20.0%
!! TGTAATTGAATCATTTGAAT+TGG - chr5_3:61960566-61960585 Msa0823300:intron 20.0%
!!! TAAACATACTCTAAAAAGTT+AGG - chr5_3:61960628-61960647 Msa0823300:intron 20.0%
!!! AAACATACTCTAAAAAGTTA+GGG - chr5_3:61960629-61960648 Msa0823300:intron 20.0%
!!! ACTTAACTCAATTTTTTTTG+AGG + chr5_3:61960802-61960821 None:intergenic 20.0%
!! TCAAAAAAAATTGAGTTAAG+TGG - chr5_3:61960801-61960820 Msa0823300:intron 20.0%
!!! TTTCATTTAATCTTTTGTTG+TGG + chr5_3:61960939-61960958 None:intergenic 20.0%
!! AAAATAAGCTAAAAATAGCT+TGG - chr5_3:61961018-61961037 Msa0823300:intron 20.0%
!! AAATAAGCTAAAAATAGCTT+GGG - chr5_3:61961019-61961038 Msa0823300:intron 20.0%
!!! TCTCAGTTTAATTTTTTTCA+TGG - chr5_3:61961334-61961353 Msa0823300:intron 20.0%
!! CTAAGATTTGATAAGAAAAA+TGG - chr5_3:61961563-61961582 Msa0823300:intron 20.0%
!! TACACAATCACTATAAAAAA+TGG + chr5_3:61961981-61962000 None:intergenic 20.0%
!! AAACTATAAATACCAACATA+AGG + chr5_3:61962523-61962542 None:intergenic 20.0%
!! TGATCATTCAAAAAAAATAG+GGG - chr5_3:61962939-61962958 Msa0823300:CDS 20.0%
!! TCAATGACAAAATATCTTAA+TGG - chr5_3:61962971-61962990 Msa0823300:exon 20.0%
!! TGCATATTTCTATTACCTAT+TGG + chr5_3:61959137-61959156 None:intergenic 25.0%
! GTAATAGAAATATGCACATT+TGG - chr5_3:61959141-61959160 Msa0823300:three_prime_UTR 25.0%
! TTTCCAAATTCTTCCTTTAT+TGG - chr5_3:61959239-61959258 Msa0823300:intron 25.0%
! ATACCAATAAAGGAAGAATT+TGG + chr5_3:61959245-61959264 None:intergenic 25.0%
! CAAAAGAAGAATACCAATAA+AGG + chr5_3:61959255-61959274 None:intergenic 25.0%
!! CTTTATTGGTATTCTTCTTT+TGG - chr5_3:61959253-61959272 Msa0823300:intron 25.0%
! AAAATAAAAATGGTGTGACA+TGG - chr5_3:61959394-61959413 Msa0823300:CDS 25.0%
!! TATCGAGAAGTATATTTAAG+GGG + chr5_3:61959498-61959517 None:intergenic 25.0%
!! GATATCGAGAAGTATATTTA+AGG + chr5_3:61959500-61959519 None:intergenic 25.0%
!!! TTTTTTCAAATCTTGCAAGT+TGG - chr5_3:61959829-61959848 Msa0823300:intron 25.0%
!!! GGGAAATTTTGAAATTTGAT+AGG + chr5_3:61960001-61960020 None:intergenic 25.0%
!!! AAAGTTCTAGGAAATTCAAA+TGG + chr5_3:61960128-61960147 None:intergenic 25.0%
! AACAATGAAATTTAGCTAGA+AGG + chr5_3:61960225-61960244 None:intergenic 25.0%
! TCTAGCTAAATTTCATTGTT+TGG - chr5_3:61960225-61960244 Msa0823300:CDS 25.0%
! GCACATCTTGAATAATTTAT+AGG + chr5_3:61960357-61960376 None:intergenic 25.0%
! GAAAAAATTGAGGGTTAATT+TGG + chr5_3:61960407-61960426 None:intergenic 25.0%
! AGAGATTTGAAAAACAACTT+AGG + chr5_3:61961053-61961072 None:intergenic 25.0%
!!! GATTAGTTGTATGATTTTCA+AGG - chr5_3:61961480-61961499 Msa0823300:intron 25.0%
!!! AAAGTTGATGGTAGAAAATA+AGG + chr5_3:61961791-61961810 None:intergenic 25.0%
!! AAGTGAATGTCTTATTAAGT+GGG - chr5_3:61962179-61962198 Msa0823300:intron 25.0%
! AATATAAGGAGAAATTCAGA+TGG - chr5_3:61962352-61962371 Msa0823300:intron 25.0%
! ATATAAGGAGAAATTCAGAT+GGG - chr5_3:61962353-61962372 Msa0823300:intron 25.0%
!! AAAGATGGAAAACTTTTGAT+TGG - chr5_3:61962484-61962503 Msa0823300:intron 25.0%
! AGAATACAATATACTCTTTC+TGG - chr5_3:61962546-61962565 Msa0823300:intron 25.0%
! TAATTACAATTGAGATCAGA+TGG - chr5_3:61962683-61962702 Msa0823300:intron 25.0%
! CAAAATATCTTAATGGAGTT+CGG - chr5_3:61962978-61962997 Msa0823300:exon 25.0%
!!! AGTCTTGTTTTTGATAGTCA+CGG - chr5_3:61959022-61959041 Msa0823300:three_prime_UTR 30.0%
AAAGAAAGAATTTGGAAACG+TGG + chr5_3:61959172-61959191 None:intergenic 30.0%
GAAGTAAAGAGTAAAGTCAA+GGG + chr5_3:61959570-61959589 None:intergenic 30.0%
TGAAGTAAAGAGTAAAGTCA+AGG + chr5_3:61959571-61959590 None:intergenic 30.0%
! TAAGACACTAAAAGTGTGTT+TGG - chr5_3:61959610-61959629 Msa0823300:CDS 30.0%
TTTGGATGATTGAATGTACT+GGG - chr5_3:61959628-61959647 Msa0823300:CDS 30.0%
CTCAATGAAATTTACCTAGA+AGG + chr5_3:61959682-61959701 None:intergenic 30.0%
!! TCTAAGATTGGATGTTTTGA+GGG - chr5_3:61960190-61960209 Msa0823300:CDS 30.0%
ATTATTCAAGATGTGCTAGT+TGG - chr5_3:61960361-61960380 Msa0823300:intron 30.0%
TGAAAAATCACACGCTTAAA+TGG + chr5_3:61960746-61960765 None:intergenic 30.0%
AAAAATTGAGTTAAGTGGCA+TGG - chr5_3:61960806-61960825 Msa0823300:intron 30.0%
TAAAAGACTTAGACGTTGTT+TGG - chr5_3:61960847-61960866 Msa0823300:intron 30.0%
AAACATACCCTTATTCTACA+AGG - chr5_3:61961128-61961147 Msa0823300:intron 30.0%
!! TCTCTACCTTTTGTTTCAAA+CGG - chr5_3:61961171-61961190 Msa0823300:intron 30.0%
! ATGAAACCGTTTGAAACAAA+AGG + chr5_3:61961180-61961199 None:intergenic 30.0%
CTGAAAACAGATAGAAGATT+AGG + chr5_3:61961230-61961249 None:intergenic 30.0%
!! AGTTGTATGATTTTCAAGGT+CGG - chr5_3:61961484-61961503 Msa0823300:intron 30.0%
TTATCAAATCTTAGTCCTAG+TGG + chr5_3:61961557-61961576 None:intergenic 30.0%
CAAAATGCAGATAAAGTTGA+TGG + chr5_3:61961803-61961822 None:intergenic 30.0%
! GAAGTGAATGTCTTATTAAG+TGG - chr5_3:61962178-61962197 Msa0823300:intron 30.0%
! GAACAGCAAAAATATTGACT+TGG + chr5_3:61962315-61962334 None:intergenic 30.0%
!!! AATATTTTTGCTGTTCTTCC+AGG - chr5_3:61962319-61962338 Msa0823300:intron 30.0%
GAATTTCTCCTTATATTGTC+CGG + chr5_3:61962349-61962368 None:intergenic 30.0%
CTATAAAGTTGAGTGATGAA+GGG - chr5_3:61962404-61962423 Msa0823300:intron 30.0%
TATAAAGTTGAGTGATGAAG+GGG - chr5_3:61962405-61962424 Msa0823300:intron 30.0%
GAAATATTAGAAATCGTGGA+AGG - chr5_3:61962427-61962446 Msa0823300:intron 30.0%
!! TGGAAAACTTTTGATTGGAT+CGG - chr5_3:61962489-61962508 Msa0823300:intron 30.0%
! CATCTTTGCACTCTTTTCAT+CGG - chr5_3:61958925-61958944 Msa0823300:three_prime_UTR 35.0%
!!! TTTTCATCGGTTCCAATTTC+TGG - chr5_3:61958938-61958957 Msa0823300:three_prime_UTR 35.0%
CTATCAAAAACAAGACTCTC+CGG + chr5_3:61959019-61959038 None:intergenic 35.0%
!!! GACGGATTTTGAAGTATGAA+GGG - chr5_3:61959074-61959093 Msa0823300:three_prime_UTR 35.0%
!!! ACGGATTTTGAAGTATGAAG+GGG - chr5_3:61959075-61959094 Msa0823300:three_prime_UTR 35.0%
AAAGGAAGAATTTGGAAACG+TGG + chr5_3:61959237-61959256 None:intergenic 35.0%
ATTATTAGTGACTAGGGAGT+AGG - chr5_3:61959307-61959326 Msa0823300:CDS 35.0%
TTATTAGTGACTAGGGAGTA+GGG - chr5_3:61959308-61959327 Msa0823300:CDS 35.0%
AGCTTCACCACTAGATTATT+AGG - chr5_3:61959364-61959383 Msa0823300:CDS 35.0%
TAAAAATGGTGTGACATGGT+TGG - chr5_3:61959398-61959417 Msa0823300:CDS 35.0%
!! ACATGGTTGGTAGATGTTAA+GGG - chr5_3:61959411-61959430 Msa0823300:CDS 35.0%
GTTTGGATGATTGAATGTAC+TGG - chr5_3:61959627-61959646 Msa0823300:CDS 35.0%
GAGAGAATTCAAATCCTTCT+AGG - chr5_3:61959665-61959684 Msa0823300:CDS 35.0%
GAATTTCGCTATGTTTAGCT+TGG + chr5_3:61959760-61959779 None:intergenic 35.0%
!! GCAAATTTTGAGGGGTTAAA+TGG + chr5_3:61959969-61959988 None:intergenic 35.0%
ACCCCTCAAAATTTGCAAAT+TGG - chr5_3:61959973-61959992 Msa0823300:intron 35.0%
! GCCAATTTGCAAATTTTGAG+GGG + chr5_3:61959977-61959996 None:intergenic 35.0%
! GGCCAATTTGCAAATTTTGA+GGG + chr5_3:61959978-61959997 None:intergenic 35.0%
!! CATTCAAACACCTCTAAGAT+TGG - chr5_3:61960178-61960197 Msa0823300:CDS 35.0%
CTCAAAACATCCAATCTTAG+AGG + chr5_3:61960191-61960210 None:intergenic 35.0%
!!! CTCTAAGATTGGATGTTTTG+AGG - chr5_3:61960189-61960208 Msa0823300:CDS 35.0%
! CTCTAAAAAGTTAGGGTCAA+TGG - chr5_3:61960636-61960655 Msa0823300:intron 35.0%
GTCACTTGATCTATAACTTG+TGG + chr5_3:61960663-61960682 None:intergenic 35.0%
TCATGCCAAAATTGCTAGAT+CGG - chr5_3:61960685-61960704 Msa0823300:intron 35.0%
! AATGTCCGATCTAGCAATTT+TGG + chr5_3:61960693-61960712 None:intergenic 35.0%
AAAATCACACGCTTAAATGG+AGG + chr5_3:61960743-61960762 None:intergenic 35.0%
TTGCTTGCCTTGTAGAATAA+GGG + chr5_3:61961138-61961157 None:intergenic 35.0%
TTTGCTTGCCTTGTAGAATA+AGG + chr5_3:61961139-61961158 None:intergenic 35.0%
ATTGTTTGAGAATGCAAGCA+AGG - chr5_3:61961201-61961220 Msa0823300:intron 35.0%
!!! AATAGCTACTTTTTTGTCCG+AGG - chr5_3:61961369-61961388 Msa0823300:intron 35.0%
! AACCTTGTTGTACATATCCT+CGG + chr5_3:61961389-61961408 None:intergenic 35.0%
CAGAGTTAGAGGATATTTGT+GGG - chr5_3:61961528-61961547 Msa0823300:intron 35.0%
TATATTGTTGATGCCTACCT+TGG - chr5_3:61961593-61961612 Msa0823300:intron 35.0%
ATGTCATTGTTGAAGCGAAA+GGG + chr5_3:61961683-61961702 None:intergenic 35.0%
TTGTTCACTTGAGTTCAGAT+AGG - chr5_3:61961911-61961930 Msa0823300:intron 35.0%
TGTTCACTTGAGTTCAGATA+GGG - chr5_3:61961912-61961931 Msa0823300:intron 35.0%
!!! TGTTGGTCACTTTTGTTTGT+AGG - chr5_3:61962086-61962105 Msa0823300:intron 35.0%
!! ATTCCGCTTTTACTTCTTAG+CGG - chr5_3:61962112-61962131 Msa0823300:intron 35.0%
TTGCTTAAACAAACACCGTT+GGG + chr5_3:61962214-61962233 None:intergenic 35.0%
TTTGCTTAAACAAACACCGT+TGG + chr5_3:61962215-61962234 None:intergenic 35.0%
GGTGTTTGTTTAAGCAAAGA+CGG - chr5_3:61962217-61962236 Msa0823300:intron 35.0%
! GACGGTTTATTTCTTCTAGT+AGG - chr5_3:61962235-61962254 Msa0823300:intron 35.0%
! AAATTCAGATGGGCAGTTTT+GGG - chr5_3:61962363-61962382 Msa0823300:intron 35.0%
GCTATAAAGTTGAGTGATGA+AGG - chr5_3:61962403-61962422 Msa0823300:intron 35.0%
AGGGGAAATATTAGAAATCG+TGG - chr5_3:61962423-61962442 Msa0823300:intron 35.0%
AGTATTATACTACCCATGTC+AGG - chr5_3:61962706-61962725 Msa0823300:intron 35.0%
GTATTATACTACCCATGTCA+GGG - chr5_3:61962707-61962726 Msa0823300:intron 35.0%
TATTATACTACCCATGTCAG+GGG - chr5_3:61962708-61962727 Msa0823300:intron 35.0%
ATAAAAGAATCCCCTGACAT+GGG + chr5_3:61962721-61962740 None:intergenic 35.0%
AATAAAAGAATCCCCTGACA+TGG + chr5_3:61962722-61962741 None:intergenic 35.0%
! GTAATGGGGAGTAATTATGT+TGG - chr5_3:61962759-61962778 Msa0823300:CDS 35.0%
TAATGGAGTTCGGAAAATGT+AGG - chr5_3:61962988-61963007 Msa0823300:five_prime_UTR 35.0%
! GGTTCCAATTTCTGGATCAA+AGG - chr5_3:61958946-61958965 Msa0823300:three_prime_UTR 40.0%
CTGTCCTTTGATCCAGAAAT+TGG + chr5_3:61958953-61958972 None:intergenic 40.0%
!!! GGACGGATTTTGAAGTATGA+AGG - chr5_3:61959073-61959092 Msa0823300:three_prime_UTR 40.0%
!!! GATTTTGAAGTATGAAGGGG+AGG - chr5_3:61959078-61959097 Msa0823300:three_prime_UTR 40.0%
TTGCTGTCACTAGTTCCAAT+AGG - chr5_3:61959119-61959138 Msa0823300:three_prime_UTR 40.0%
GGAGTAGGGAGACTTAAATT+GGG - chr5_3:61959322-61959341 Msa0823300:CDS 40.0%
!! GACATGGTTGGTAGATGTTA+AGG - chr5_3:61959410-61959429 Msa0823300:CDS 40.0%
GGAGTCTCTTAAGCATATGT+GGG - chr5_3:61959432-61959451 Msa0823300:CDS 40.0%
! GGGCCAATTTGCAAATTTTG+AGG + chr5_3:61959979-61959998 None:intergenic 40.0%
AAACCCTAGCGATACTGTTT+GGG + chr5_3:61961076-61961095 None:intergenic 40.0%
TAAACCCTAGCGATACTGTT+TGG + chr5_3:61961077-61961096 None:intergenic 40.0%
ATCGCTAGGGTTTATGTAAG+TGG - chr5_3:61961083-61961102 Msa0823300:intron 40.0%
CCACAAATATCCTCTAACTC+TGG + chr5_3:61961530-61961549 None:intergenic 40.0%
CCAGAGTTAGAGGATATTTG+TGG - chr5_3:61961527-61961546 Msa0823300:intron 40.0%
AGTTAGAGGATATTTGTGGG+AGG - chr5_3:61961531-61961550 Msa0823300:intron 40.0%
CATGTCATTGTTGAAGCGAA+AGG + chr5_3:61961684-61961703 None:intergenic 40.0%
CTTTCGCTTCAACAATGACA+TGG - chr5_3:61961682-61961701 Msa0823300:intron 40.0%
TCTCCGCTAAGAAGTAAAAG+CGG + chr5_3:61962118-61962137 None:intergenic 40.0%
! AGTGGGCTTAATTATCCCAA+CGG - chr5_3:61962196-61962215 Msa0823300:intron 40.0%
TAGGTGAAACTTCGACTTTC+CGG - chr5_3:61962254-61962273 Msa0823300:intron 40.0%
! ATTCTTCGACTTTGGCTTCA+TGG - chr5_3:61962277-61962296 Msa0823300:intron 40.0%
!! TATTGACTTGGCCAGCATTA+GGG + chr5_3:61962303-61962322 None:intergenic 40.0%
!! ATATTGACTTGGCCAGCATT+AGG + chr5_3:61962304-61962323 None:intergenic 40.0%
CTTATATTGTCCGGATAACC+TGG + chr5_3:61962340-61962359 None:intergenic 40.0%
CAGGTTATCCGGACAATATA+AGG - chr5_3:61962338-61962357 Msa0823300:intron 40.0%
! GAAATTCAGATGGGCAGTTT+TGG - chr5_3:61962362-61962381 Msa0823300:intron 40.0%
CATGAGATATGTCAGTGAAG+CGG - chr5_3:61962456-61962475 Msa0823300:intron 40.0%
AGTGAAGCGGATGAAAAAGA+TGG - chr5_3:61962469-61962488 Msa0823300:intron 40.0%
!! TCGGTGTTAATGCCTTATGT+TGG - chr5_3:61962508-61962527 Msa0823300:intron 40.0%
ATGAGTTCAAACACGAACGA+AGG - chr5_3:61962879-61962898 Msa0823300:CDS 40.0%
GTGCAAGAAAAGTTGCAGCA+TGG + chr5_3:61958895-61958914 None:intergenic 45.0%
!! GTTTTTGATAGTCACGGCGA+AGG - chr5_3:61959028-61959047 Msa0823300:three_prime_UTR 45.0%
GGGAGTAGGGAGACTTAAAT+TGG - chr5_3:61959321-61959340 Msa0823300:CDS 45.0%
GGGAGTCTCTTAAGCATATG+TGG - chr5_3:61959431-61959450 Msa0823300:CDS 45.0%
GCTAGATCGGACATTGTAAC+CGG - chr5_3:61960698-61960717 Msa0823300:intron 45.0%
TCTCCCAAACAGTATCGCTA+GGG - chr5_3:61961070-61961089 Msa0823300:intron 45.0%
GTCCGAGGATATGTACAACA+AGG - chr5_3:61961384-61961403 Msa0823300:intron 45.0%
!! ATTTTCAAGGTCGGACTGTG+TGG - chr5_3:61961493-61961512 Msa0823300:intron 45.0%
TACTACGTTAAGGCCAAGGT+AGG + chr5_3:61961609-61961628 None:intergenic 45.0%
!! TACCTTGGCCTTAACGTAGT+AGG - chr5_3:61961608-61961627 Msa0823300:intron 45.0%
TTAACGTAGTAGGACCTGCA+GGG - chr5_3:61961618-61961637 Msa0823300:intron 45.0%
AGCTTCTGTTGCTAACTGTG+TGG + chr5_3:61961651-61961670 None:intergenic 45.0%
CAGTTAGCAACAGAAGCTGA+AGG - chr5_3:61961653-61961672 Msa0823300:intron 45.0%
CAAGCACAGTCTATCAGAGA+AGG - chr5_3:61961744-61961763 Msa0823300:intron 45.0%
CTTGAGTTCAGATAGGGAGA+TGG - chr5_3:61961918-61961937 Msa0823300:intron 45.0%
CTTCTTAGCGGAGACAAAAC+TGG - chr5_3:61962124-61962143 Msa0823300:intron 45.0%
TTAGCGGAGACAAAACTGGA+AGG - chr5_3:61962128-61962147 Msa0823300:intron 45.0%
CTTTCCGGATTCTTCGACTT+TGG - chr5_3:61962269-61962288 Msa0823300:intron 45.0%
GAAGCCAAAGTCGAAGAATC+CGG + chr5_3:61962276-61962295 None:intergenic 45.0%
TGCTGTTCTTCCAGGTTATC+CGG - chr5_3:61962327-61962346 Msa0823300:intron 45.0%
CGCTTCACTGACATATCTCA+TGG + chr5_3:61962458-61962477 None:intergenic 45.0%
!!! CATTTTAATATTTATAAATA+TGG + chr5_3:61960322-61960341 None:intergenic 5.0%
!! AAAATGATTTATAATTTATA+TGG + chr5_3:61960973-61960992 None:intergenic 5.0%
!! AAAAAAAAATATTAATTGTA+AGG + chr5_3:61962021-61962040 None:intergenic 5.0%
TGGATCAAAGGACAGTCTCC+AGG - chr5_3:61958958-61958977 Msa0823300:three_prime_UTR 50.0%
GATCGGTTACTCCATGTCAC+CGG - chr5_3:61958983-61959002 Msa0823300:three_prime_UTR 50.0%
AAGTATGAAGGGGAGGAACG+TGG - chr5_3:61959085-61959104 Msa0823300:three_prime_UTR 50.0%
AACCGGAGTTTCAACCCCAA+CGG - chr5_3:61960715-61960734 Msa0823300:intron 50.0%
CTTAAATGGAGGAGCCGTTG+GGG + chr5_3:61960732-61960751 None:intergenic 50.0%
GCTTAAATGGAGGAGCCGTT+GGG + chr5_3:61960733-61960752 None:intergenic 50.0%
CTCTCCCAAACAGTATCGCT+AGG - chr5_3:61961069-61961088 Msa0823300:intron 50.0%
TCCATTCGCACCAGAGTTAG+AGG - chr5_3:61961517-61961536 Msa0823300:intron 50.0%
TCCTCTAACTCTGGTGCGAA+TGG + chr5_3:61961521-61961540 None:intergenic 50.0%
GATATTTGTGGGAGGCCACT+AGG - chr5_3:61961539-61961558 Msa0823300:intron 50.0%
GTCCTACTACGTTAAGGCCA+AGG + chr5_3:61961613-61961632 None:intergenic 50.0%
CTGCAGGTCCTACTACGTTA+AGG + chr5_3:61961619-61961638 None:intergenic 50.0%
CTTAACGTAGTAGGACCTGC+AGG - chr5_3:61961617-61961636 Msa0823300:intron 50.0%
TAACGTAGTAGGACCTGCAG+GGG - chr5_3:61961619-61961638 Msa0823300:intron 50.0%
GAGTTCAGATAGGGAGATGG+TGG - chr5_3:61961921-61961940 Msa0823300:intron 50.0%
! ATAGGGAGATGGTGGCTTTG+AGG - chr5_3:61961929-61961948 Msa0823300:intron 50.0%
AGGACAGTCTCCAGGCTGAT+CGG - chr5_3:61958966-61958985 Msa0823300:three_prime_UTR 55.0%
CATGGAGTAACCGATCAGCC+TGG + chr5_3:61958979-61958998 None:intergenic 55.0%
AACAAGACTCTCCGGCCCAA+CGG + chr5_3:61959011-61959030 None:intergenic 55.0%
TCACGGCGAAGGACCATACA+CGG - chr5_3:61959039-61959058 Msa0823300:three_prime_UTR 55.0%
ATGAAGGGGAGGAACGTGGT+TGG - chr5_3:61959089-61959108 Msa0823300:three_prime_UTR 55.0%
AGCCGTTGGGGTTGAAACTC+CGG + chr5_3:61960720-61960739 None:intergenic 55.0%
CGCTTAAATGGAGGAGCCGT+TGG + chr5_3:61960734-61960753 None:intergenic 55.0%
AACGTAGTAGGACCTGCAGG+GGG - chr5_3:61961620-61961639 Msa0823300:intron 55.0%
TGGCTTCATGGCCCTAATGC+TGG - chr5_3:61962289-61962308 Msa0823300:intron 55.0%
TCCATGTCACCGGAGCCGTT+GGG - chr5_3:61958993-61959012 Msa0823300:three_prime_UTR 60.0%
CACGGCGAAGGACCATACAC+GGG - chr5_3:61959040-61959059 Msa0823300:three_prime_UTR 60.0%
AGTAGGACCTGCAGGGGGTT+TGG - chr5_3:61961625-61961644 Msa0823300:intron 60.0%
CTCCATGTCACCGGAGCCGT+TGG - chr5_3:61958992-61959011 Msa0823300:three_prime_UTR 65.0%
CGAAGGACCATACACGGGCG+TGG - chr5_3:61959045-61959064 Msa0823300:three_prime_UTR 65.0%
AGGACCATACACGGGCGTGG+CGG - chr5_3:61959048-61959067 Msa0823300:three_prime_UTR 65.0%
TGTGTGGCCAAACCCCCTGC+AGG + chr5_3:61961635-61961654 None:intergenic 65.0%
GCCCAACGGCTCCGGTGACA+TGG + chr5_3:61958997-61959016 None:intergenic 70.0%
TGTCACCGGAGCCGTTGGGC+CGG - chr5_3:61958997-61959016 Msa0823300:three_prime_UTR 70.0%
ACTCTCCGGCCCAACGGCTC+CGG + chr5_3:61959005-61959024 None:intergenic 70.0%
CCATCCGCCACGCCCGTGTA+TGG + chr5_3:61959055-61959074 None:intergenic 70.0%
! CCATACACGGGCGTGGCGGA+TGG - chr5_3:61959052-61959071 Msa0823300:three_prime_UTR 70.0%
!! ACACGGGCGTGGCGGATGGA+CGG - chr5_3:61959056-61959075 Msa0823300:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 61958836 61963017 61958836 ID=Msa0823300;Name=Msa0823300
chr5_3 mRNA 61958836 61963017 61958836 ID=Msa0823300-mRNA-1;Parent=Msa0823300;Name=Msa0823300-mRNA-1;_AED=0.15;_eAED=0.15;_QI=36|1|1|1|0.66|0.5|4|414|323
chr5_3 exon 61958836 61959215 61958836 ID=Msa0823300-mRNA-1:exon:19229;Parent=Msa0823300-mRNA-1
chr5_3 exon 61959273 61959745 61959273 ID=Msa0823300-mRNA-1:exon:19228;Parent=Msa0823300-mRNA-1
chr5_3 exon 61960088 61960351 61960088 ID=Msa0823300-mRNA-1:exon:19227;Parent=Msa0823300-mRNA-1
chr5_3 exon 61962713 61963017 61962713 ID=Msa0823300-mRNA-1:exon:19226;Parent=Msa0823300-mRNA-1
chr5_3 five_prime_UTR 61962982 61963017 61962982 ID=Msa0823300-mRNA-1:five_prime_utr;Parent=Msa0823300-mRNA-1
chr5_3 CDS 61962713 61962981 61962713 ID=Msa0823300-mRNA-1:cds;Parent=Msa0823300-mRNA-1
chr5_3 CDS 61960088 61960351 61960088 ID=Msa0823300-mRNA-1:cds;Parent=Msa0823300-mRNA-1
chr5_3 CDS 61959307 61959745 61959307 ID=Msa0823300-mRNA-1:cds;Parent=Msa0823300-mRNA-1
chr5_3 three_prime_UTR 61959273 61959306 61959273 ID=Msa0823300-mRNA-1:three_prime_utr;Parent=Msa0823300-mRNA-1
chr5_3 three_prime_UTR 61958836 61959215 61958836 ID=Msa0823300-mRNA-1:three_prime_utr;Parent=Msa0823300-mRNA-1
Gene Sequence

>Msa0823300

ATGAACTTCAAAGACAGCATCCATGCTGCAACTTTTCTTGCACTCTTCTCTTGCATCTTTGCACTCTTTTCATCGGTTCCAATTTCTGGATCAAAGGACAGTCTCCAGGCTGATCGGTTACTCCATGTCACCGGAGCCGTTGGGCCGGAGAGTCTTGTTTTTGATAGTCACGGCGAAGGACCATACACGGGCGTGGCGGATGGACGGATTTTGAAGTATGAAGGGGAGGAACGTGGTTGGACTGAATTTGCTGTCACTAGTTCCAATAGGTCGGACTGTGTGGTTCCATTCGCACCAGAGTTAGAGGATATTTGTGGGAGGCCACTAGGACTAAGATTTGATAAGAAAAATGGAGATTTGTATATTGTTGATGCCTACCTTGGCCTTAACGTAGTAGGACCTGCAGGGGGTTTGGCCACACAGTTAGCAACAGAAGCTGAAGGCACACCCTTTCGCTTCAACAATGACATGGACATTAGTGAAGATGAAGATGTGATTTACTTCACTGATTCAAGCACAGTCTATCAGAGAAGGCAAATTCCGCTTTTACTTCTTAGCGGAGACAAAACTGGAAGGTTAATGAAATATGACAAGTCAACGAGAGAAGTGAATGTCTTATTAAGTGGGCTTAATTATCCCAACGGTGTTTGTTTAAGCAAAGACGGTTTATTTCTTCTAGTAGGTGAAACTTCGACTTTCCGGATTCTTCGACTTTGGCTTCATGGCCCTAATGCTGGCCAAGTCAATATTTTTGCTGTTCTTCCAGGTTATCCGGACAATATAAGGAGAAATTCAGATGGGCAGTTTTGGGTTGCTTTGCATAATGCAGCTATAAAGTTGAGTGATGAAGGGGAAATATTAGAAATCGTGGAAGGAAAGACCATGAGATATGTCAGTGAAGCGGATGAAAAAGATGGAAAACTTTTGATTGGATCGGTGTTAATGCCTTATGTTGGTATTTATAGTTTATGA

Protein sequence

>Msa0823300

MNFKDSIHAATFLALFSCIFALFSSVPISGSKDSLQADRLLHVTGAVGPESLVFDSHGEGPYTGVADGRILKYEGEERGWTEFAVTSSNRSDCVVPFAPELEDICGRPLGLRFDKKNGDLYIVDAYLGLNVVGPAGGLATQLATEAEGTPFRFNNDMDISEDEDVIYFTDSSTVYQRRQIPLLLLSGDKTGRLMKYDKSTREVNVLLSGLNYPNGVCLSKDGLFLLVGETSTFRILRLWLHGPNAGQVNIFAVLPGYPDNIRRNSDGQFWVALHNAAIKLSDEGEILEIVEGKTMRYVSEADEKDGKLLIGSVLMPYVGIYSL*