AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0027120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027120 MtrunA17_Chr1g0183221 59.231 130 42 3 1 123 1 126 5.74e-41 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 28 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGTTGGTGAACAATTT+TGG 0.230502 1_1:-51393243 Msa0027120:CDS
AAATGCTTTGGTCACATCTT+TGG 0.268373 1_1:+51393816 None:intergenic
ACATATTGGATTCATGCATT+TGG 0.305986 1_1:-51393311 Msa0027120:CDS
CATATTGGATTCATGCATTT+GGG 0.312094 1_1:-51393310 Msa0027120:CDS
TAGTATTCAGCTAGACATAT+TGG 0.368898 1_1:-51393325 Msa0027120:CDS
AAGCATTTATCAAAATTTAG+AGG 0.378427 1_1:-51393801 Msa0027120:CDS
TTGCTCAGTTGTGTTGGTGC+TGG 0.395669 1_1:+51393208 None:intergenic
AACTTAAATTCCTCATTCAA+TGG 0.412356 1_1:-51397439 Msa0027120:CDS
GAGGAACTTCTTATACTAGC+TGG 0.418204 1_1:-51393782 Msa0027120:CDS
ATTTGCATGTGCCAAGTTTG+AGG 0.436765 1_1:-51397411 Msa0027120:CDS
ATCAGCATATCAACATTTGT+TGG 0.437511 1_1:-51393256 Msa0027120:CDS
GCCACTTCTTTAATTATCCA+TGG 0.476745 1_1:-51397469 Msa0027120:CDS
TGATTGGGATGAAGAGCAAT+GGG 0.484655 1_1:-51393381 Msa0027120:intron
AATTTAAGTTCAAACTTCCA+TGG 0.492114 1_1:+51397452 None:intergenic
CAGAAGCCACGCTCATACTC+AGG 0.512959 1_1:-51398157 Msa0027120:intron
TTCTTATACTAGCTGGAGAA+AGG 0.524955 1_1:-51393775 Msa0027120:intron
AATTTCTTGCTCAGTTGTGT+TGG 0.535225 1_1:+51393202 None:intergenic
ATCATCGGTAACCTCAAACT+TGG 0.546137 1_1:+51397400 None:intergenic
TTGATTGGGATGAAGAGCAA+TGG 0.550913 1_1:-51393382 Msa0027120:intron
AATTGAGTTGTAGAGTGGAG+AGG 0.552148 1_1:+51398180 None:intergenic
TCCATGGATAATTAAAGAAG+TGG 0.555425 1_1:+51397468 None:intergenic
GTGACACAATAGACATTCTG+TGG 0.563679 1_1:-51398317 None:intergenic
AAAAGATAGAAGTAAAATTG+TGG 0.605819 1_1:+51398293 None:intergenic
CAAATGTTGACCATTGAATG+AGG 0.613868 1_1:+51397429 None:intergenic
TTATGACAACTAGAGAAGCA+AGG 0.651832 1_1:-51398266 Msa0027120:five_prime_UTR
TTCTGAATTGAGTTGTAGAG+TGG 0.666148 1_1:+51398175 None:intergenic
TTTGTACCTGAGTATGAGCG+TGG 0.677678 1_1:+51398151 None:intergenic
ATTTGGGATTGTGATAGCAG+TGG 0.699973 1_1:-51393294 Msa0027120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATATTTTAAGAGTTTT+TGG + chr1_1:51394656-51394675 None:intergenic 10.0%
!! AAAAACTCTTAAAATATATT+AGG - chr1_1:51394655-51394674 Msa0027120:intron 10.0%
!! ATAATGTAAAGATATATAAA+TGG - chr1_1:51396063-51396082 Msa0027120:intron 10.0%
!! TAATGTAAAGATATATAAAT+GGG - chr1_1:51396064-51396083 Msa0027120:intron 10.0%
!!! AATAAATTTGTTCATTTTTT+AGG - chr1_1:51396182-51396201 Msa0027120:intron 10.0%
!!! TTTTTTAATATGTTTTTAAG+TGG - chr1_1:51396606-51396625 Msa0027120:intron 10.0%
!!! ATATTTTTTTAACTTTATAC+GGG + chr1_1:51396720-51396739 None:intergenic 10.0%
!!! TTTACAATTAATACTTTTTT+AGG + chr1_1:51396865-51396884 None:intergenic 10.0%
!! TAAATAAAAATTCAACTATA+AGG + chr1_1:51397125-51397144 None:intergenic 10.0%
!! TTAATACTCTTAAAAAAAAT+TGG - chr1_1:51397180-51397199 Msa0027120:intron 10.0%
!! AAATAAACAAAACAAAAGAT+GGG - chr1_1:51393571-51393590 Msa0027120:intron 15.0%
!! TTAAAAATAGGGATTATAAT+AGG + chr1_1:51394363-51394382 None:intergenic 15.0%
!!! TATTATAATCCCTATTTTTA+AGG - chr1_1:51394362-51394381 Msa0027120:intron 15.0%
!! GTTAACATTATAATATTTCA+AGG + chr1_1:51394390-51394409 None:intergenic 15.0%
!!! ATTTATTTTAAGGTATCTAA+GGG + chr1_1:51394421-51394440 None:intergenic 15.0%
!!! AATTTATTTTAAGGTATCTA+AGG + chr1_1:51394422-51394441 None:intergenic 15.0%
!! ATTTCTTAGAATATAAAGAT+GGG + chr1_1:51394446-51394465 None:intergenic 15.0%
!! AAATTGATTGAATAAATGAT+GGG + chr1_1:51394595-51394614 None:intergenic 15.0%
!! AAAATTGATTGAATAAATGA+TGG + chr1_1:51394596-51394615 None:intergenic 15.0%
!! TCGTATTTAAAAAAAATGTT+GGG + chr1_1:51394744-51394763 None:intergenic 15.0%
!! AGCAAAATTATAAATCTTAA+CGG + chr1_1:51395250-51395269 None:intergenic 15.0%
!!! AATGTATCTGTTTTATATAT+AGG + chr1_1:51395416-51395435 None:intergenic 15.0%
!! ATATATAAAACAGATACATT+AGG - chr1_1:51395416-51395435 Msa0027120:intron 15.0%
!! AAAGAAAAAGAAACAAATAA+TGG + chr1_1:51395795-51395814 None:intergenic 15.0%
!!! TTCTTCATAATTTTAACAAA+CGG + chr1_1:51395898-51395917 None:intergenic 15.0%
!! TATTAGGAAAATTGTATTTA+AGG - chr1_1:51396005-51396024 Msa0027120:intron 15.0%
!! AATGTAAAGATATATAAATG+GGG - chr1_1:51396065-51396084 Msa0027120:intron 15.0%
!!! TTGGTTTTTAATTTTAAAAG+TGG + chr1_1:51396521-51396540 None:intergenic 15.0%
!!! AAAAAATTGGTCTATATTTA+TGG - chr1_1:51397193-51397212 Msa0027120:intron 15.0%
!! AAAAGATAGAAGTAAAATTG+TGG + chr1_1:51393235-51393254 None:intergenic 20.0%
!! GTAAATTCATAATATGAATC+AGG - chr1_1:51393470-51393489 Msa0027120:intron 20.0%
!! TTAATTTACAAGTCAACAAT+TGG + chr1_1:51393533-51393552 None:intergenic 20.0%
!!! CATCTTTTGTTTTGTTTATT+TGG + chr1_1:51393572-51393591 None:intergenic 20.0%
!! CAAATAAACAAAACAAAAGA+TGG - chr1_1:51393570-51393589 Msa0027120:intron 20.0%
!!! AAGATGGGAAATTTATTTTA+AGG + chr1_1:51394431-51394450 None:intergenic 20.0%
!! CATTTCTTAGAATATAAAGA+TGG + chr1_1:51394447-51394466 None:intergenic 20.0%
!!! TTCTAAGAAATGTTATTCTT+AGG - chr1_1:51394455-51394474 Msa0027120:intron 20.0%
!! GTTATTCTTAGGAATAAATT+TGG - chr1_1:51394466-51394485 Msa0027120:intron 20.0%
!! AACTCTTAAAATATATTAGG+TGG - chr1_1:51394658-51394677 Msa0027120:intron 20.0%
!! ACTCTTAAAATATATTAGGT+GGG - chr1_1:51394659-51394678 Msa0027120:intron 20.0%
!! CTCGTATTTAAAAAAAATGT+TGG + chr1_1:51394745-51394764 None:intergenic 20.0%
!!! CAACATTTTTTTTAAATACG+AGG - chr1_1:51394743-51394762 Msa0027120:intron 20.0%
!! AATAAACTCTACATGTTATT+AGG - chr1_1:51394886-51394905 Msa0027120:intron 20.0%
!! AAATGAAATAAAGAAGCTAA+AGG + chr1_1:51395353-51395372 None:intergenic 20.0%
!!! TTTTTACTTGTAAATGTGAT+TGG - chr1_1:51395460-51395479 Msa0027120:intron 20.0%
!!! TTTTACTCAAATTATTGAGT+TGG + chr1_1:51395700-51395719 None:intergenic 20.0%
!! AATAGGTTTCATACAAAAAA+CGG - chr1_1:51396234-51396253 Msa0027120:intron 20.0%
!!! ATTTTAAAAGTGGTGTATTT+TGG + chr1_1:51396511-51396530 None:intergenic 20.0%
!! AGCCAAAAAAAATAAATAGA+TGG - chr1_1:51396680-51396699 Msa0027120:intron 20.0%
!!! TGCCATCTATTTATTTTTTT+TGG + chr1_1:51396685-51396704 None:intergenic 20.0%
!! AAAAAAAATAAATAGATGGC+AGG - chr1_1:51396684-51396703 Msa0027120:intron 20.0%
!!! TTGGAAATTAACATTTTATG+AGG - chr1_1:51396788-51396807 Msa0027120:intron 20.0%
!!! TGGAAATTAACATTTTATGA+GGG - chr1_1:51396789-51396808 Msa0027120:intron 20.0%
!! GAAATTTAACTCTATTTAGT+TGG - chr1_1:51396896-51396915 Msa0027120:intron 20.0%
!! TTCAATTCCTTTCAATTAAA+TGG + chr1_1:51397060-51397079 None:intergenic 20.0%
!!! TTTTTAAGAGTATTAAGTGT+TGG + chr1_1:51397176-51397195 None:intergenic 20.0%
!!! CTAAATTTTGATAAATGCTT+TGG + chr1_1:51397724-51397743 None:intergenic 20.0%
!! AAGCATTTATCAAAATTTAG+AGG - chr1_1:51397724-51397743 Msa0027120:intron 20.0%
!! ATATATCTTTATTGAGCTAA+TGG - chr1_1:51397827-51397846 Msa0027120:intron 20.0%
! TCTTCAACATTACTTATGTT+TGG - chr1_1:51393402-51393421 Msa0027120:intron 25.0%
!! ATGAATCAGGTTAACATTTT+TGG - chr1_1:51393483-51393502 Msa0027120:intron 25.0%
!! TGAATCAGGTTAACATTTTT+GGG - chr1_1:51393484-51393503 Msa0027120:intron 25.0%
! TGTTGTCAAGAAAAAAATGT+TGG + chr1_1:51393627-51393646 None:intergenic 25.0%
! TTATACTTGTACTAGAATTG+TGG - chr1_1:51393766-51393785 Msa0027120:intron 25.0%
! AGAGAATACTTGAAACTAAT+GGG + chr1_1:51393873-51393892 None:intergenic 25.0%
! TAGAGAATACTTGAAACTAA+TGG + chr1_1:51393874-51393893 None:intergenic 25.0%
! ATCATATGTTCAAGATTTCA+AGG + chr1_1:51393945-51393964 None:intergenic 25.0%
!!! GCATCACTTTTTATTTTCTA+TGG + chr1_1:51393986-51394005 None:intergenic 25.0%
!! AATTTAAGTTCAAACTTCCA+TGG + chr1_1:51394076-51394095 None:intergenic 25.0%
! AACTTAAATTCCTCATTCAA+TGG - chr1_1:51394086-51394105 Msa0027120:intron 25.0%
!! AAAAGTTTTCCCAAAGAAAA+TGG - chr1_1:51394290-51394309 Msa0027120:intron 25.0%
! TTCAAGGAACCTTAAAAATA+GGG + chr1_1:51394374-51394393 None:intergenic 25.0%
! TTTCAAGGAACCTTAAAAAT+AGG + chr1_1:51394375-51394394 None:intergenic 25.0%
! CCTCAATCATAAATATCTAA+GGG + chr1_1:51394511-51394530 None:intergenic 25.0%
! TCCTCAATCATAAATATCTA+AGG + chr1_1:51394512-51394531 None:intergenic 25.0%
! GAAACAAATGAATGCTTATT+AGG + chr1_1:51394630-51394649 None:intergenic 25.0%
! TTATCTCTCTTGCATTATTA+TGG + chr1_1:51394804-51394823 None:intergenic 25.0%
!!! AAGTAGTGCTATTTAGAATA+AGG + chr1_1:51394839-51394858 None:intergenic 25.0%
! AGTTTATTAACTACTTTCGT+TGG + chr1_1:51394874-51394893 None:intergenic 25.0%
!!! ATATTTTAGTCCCAATATGA+AGG + chr1_1:51394957-51394976 None:intergenic 25.0%
!!! ATTTTTTTGACTCTCTCTTT+AGG - chr1_1:51395274-51395293 Msa0027120:intron 25.0%
! ACAGTTTAAAAAGAAAATGC+TGG + chr1_1:51395581-51395600 None:intergenic 25.0%
!! AGCATTTTCTTTTTAAACTG+TGG - chr1_1:51395580-51395599 Msa0027120:intron 25.0%
!! GCATTTTCTTTTTAAACTGT+GGG - chr1_1:51395581-51395600 Msa0027120:intron 25.0%
!! CATTTTCTTTTTAAACTGTG+GGG - chr1_1:51395582-51395601 Msa0027120:intron 25.0%
!! ATTTTCTTTTTAAACTGTGG+GGG - chr1_1:51395583-51395602 Msa0027120:intron 25.0%
!!! TTTTTAGTTTGATTTTGCAC+TGG - chr1_1:51395621-51395640 Msa0027120:intron 25.0%
! GGTGTACAGTTTAATATTTA+AGG - chr1_1:51395752-51395771 Msa0027120:intron 25.0%
! AAGTAAAGTTATCCAACAAT+AGG + chr1_1:51396038-51396057 None:intergenic 25.0%
!! ATTGGGCATTCATTATATTT+TGG - chr1_1:51396387-51396406 Msa0027120:intron 25.0%
! GAAAAACGATGTATTATTTC+AGG - chr1_1:51396409-51396428 Msa0027120:intron 25.0%
!! AGGGTGAAAAAACAATATTT+TGG + chr1_1:51396540-51396559 None:intergenic 25.0%
!!! TTTTTTAACTTTATACGGGA+AGG + chr1_1:51396716-51396735 None:intergenic 25.0%
!! GGAAATTAACATTTTATGAG+GGG - chr1_1:51396790-51396809 Msa0027120:intron 25.0%
!! GAAATTAACATTTTATGAGG+GGG - chr1_1:51396791-51396810 Msa0027120:intron 25.0%
!! AAATTAACATTTTATGAGGG+GGG - chr1_1:51396792-51396811 Msa0027120:intron 25.0%
! TTAAATGGTTAACACTTAAG+AGG + chr1_1:51397045-51397064 None:intergenic 25.0%
! GTGTTAACCATTTAATTGAA+AGG - chr1_1:51397050-51397069 Msa0027120:intron 25.0%
!! TCTAGCTTAACTAAAAATCA+TGG + chr1_1:51397346-51397365 None:intergenic 25.0%
! TAATTTCATCTAAACACTCT+TGG - chr1_1:51397377-51397396 Msa0027120:CDS 25.0%
! TACATGACAAGATAAAAAGA+TGG + chr1_1:51397489-51397508 None:intergenic 25.0%
! GAATCAGGTTAACATTTTTG+GGG - chr1_1:51393485-51393504 Msa0027120:intron 30.0%
CAATTGGAGCAAACTATATA+AGG + chr1_1:51393517-51393536 None:intergenic 30.0%
!!! GTTTTGTTTATTTGGCATTC+TGG + chr1_1:51393564-51393583 None:intergenic 30.0%
TTCTTGCATTGTTCAGTATT+TGG - chr1_1:51393651-51393670 Msa0027120:intron 30.0%
TCCATGGATAATTAAAGAAG+TGG + chr1_1:51394060-51394079 None:intergenic 30.0%
!!! GGAGTTTTTTGAGTAATCAT+CGG + chr1_1:51394143-51394162 None:intergenic 30.0%
! TTATTCCCACCATTTTCTTT+GGG + chr1_1:51394302-51394321 None:intergenic 30.0%
! TTTATTCCCACCATTTTCTT+TGG + chr1_1:51394303-51394322 None:intergenic 30.0%
CCCTTAGATATTTATGATTG+AGG - chr1_1:51394508-51394527 Msa0027120:intron 30.0%
ACTGATGTAAAGTTATTAGC+AGG + chr1_1:51394686-51394705 None:intergenic 30.0%
ACTAAAGTCTTCCTTCATAT+TGG - chr1_1:51394943-51394962 Msa0027120:intron 30.0%
CTAAAGTCTTCCTTCATATT+GGG - chr1_1:51394944-51394963 Msa0027120:intron 30.0%
!! ATCTATCTTGGTGTCATTAA+TGG - chr1_1:51395096-51395115 Msa0027120:intron 30.0%
TTACTTGTAAATGTGATTGG+AGG - chr1_1:51395463-51395482 Msa0027120:intron 30.0%
TACTTGTAAATGTGATTGGA+GGG - chr1_1:51395464-51395483 Msa0027120:intron 30.0%
TCCATGCGTGTATATTAAAA+TGG - chr1_1:51395551-51395570 Msa0027120:intron 30.0%
!! ACCATTTTAATATACACGCA+TGG + chr1_1:51395555-51395574 None:intergenic 30.0%
! GTTGCAATTTCCTTTTCATT+TGG - chr1_1:51395643-51395662 Msa0027120:intron 30.0%
! TCCAATTGTTTGGTTTAACT+TGG - chr1_1:51395964-51395983 Msa0027120:intron 30.0%
! CCAATTGTTTGGTTTAACTT+GGG - chr1_1:51395965-51395984 Msa0027120:intron 30.0%
GTGATTAATGCTACACTATT+AGG - chr1_1:51395989-51396008 Msa0027120:intron 30.0%
TAAGGTTGAAAACCTATTGT+TGG - chr1_1:51396023-51396042 Msa0027120:intron 30.0%
AATATGCTTGCAATGAATTG+TGG - chr1_1:51396114-51396133 Msa0027120:intron 30.0%
GTTCATACACGTCAAAAAAA+TGG + chr1_1:51396352-51396371 None:intergenic 30.0%
!!! TTTTCTAGTTTGAACTTGAG+AGG - chr1_1:51396440-51396459 Msa0027120:intron 30.0%
TTAAAAGACATAGCCATGTT+GGG + chr1_1:51396579-51396598 None:intergenic 30.0%
TTTAAAAGACATAGCCATGT+TGG + chr1_1:51396580-51396599 None:intergenic 30.0%
!!! AATATGTTTTTAAGTGGTGC+AGG - chr1_1:51396612-51396631 Msa0027120:intron 30.0%
CAACAAAACATAAACCATGT+TGG - chr1_1:51396754-51396773 Msa0027120:intron 30.0%
AAAACATAAACCATGTTGGA+AGG - chr1_1:51396758-51396777 Msa0027120:intron 30.0%
! AATTAACATTTTATGAGGGG+GGG - chr1_1:51396793-51396812 Msa0027120:intron 30.0%
ATGGGGTTAAATTTCAAAAG+TGG - chr1_1:51396828-51396847 Msa0027120:intron 30.0%
TGGGGTTAAATTTCAAAAGT+GGG - chr1_1:51396829-51396848 Msa0027120:intron 30.0%
GAGTTAAATTTCTTACGCAA+CGG + chr1_1:51396888-51396907 None:intergenic 30.0%
TAATGCTATATTCCTTCATC+AGG - chr1_1:51396981-51397000 Msa0027120:intron 30.0%
!! TTTAACGATGCTTTATTTCC+AGG - chr1_1:51397306-51397325 Msa0027120:intron 30.0%
!! TTAACGATGCTTTATTTCCA+GGG - chr1_1:51397307-51397326 Msa0027120:intron 30.0%
AAATTTCGCTAAGAACAACT+TGG - chr1_1:51397428-51397447 Msa0027120:CDS 30.0%
ATGACAAGATAAAAAGATGG+AGG + chr1_1:51397486-51397505 None:intergenic 30.0%
GGCATACTTAAAAACTTGAA+AGG + chr1_1:51397521-51397540 None:intergenic 30.0%
!!! AAGTTTTTAAGTATGCCTGT+TGG - chr1_1:51397524-51397543 Msa0027120:intron 30.0%
!!! CAACTAGCCAATTGTTTTTT+CGG + chr1_1:51397597-51397616 None:intergenic 30.0%
! GTGTGTTTTCCTAAAGATAA+GGG - chr1_1:51397772-51397791 Msa0027120:intron 30.0%
AATGAAGACTGACAACATAT+TGG - chr1_1:51397851-51397870 Msa0027120:intron 30.0%
ACAACAACATATACTCAAGT+TGG - chr1_1:51397925-51397944 Msa0027120:intron 30.0%
! TGTGGTCATATTGATGATAT+GGG - chr1_1:51398074-51398093 Msa0027120:intron 30.0%
TAGTATTCAGCTAGACATAT+TGG - chr1_1:51398200-51398219 Msa0027120:CDS 30.0%
ACATATTGGATTCATGCATT+TGG - chr1_1:51398214-51398233 Msa0027120:exon 30.0%
CATATTGGATTCATGCATTT+GGG - chr1_1:51398215-51398234 Msa0027120:exon 30.0%
ATCAGCATATCAACATTTGT+TGG - chr1_1:51398269-51398288 Msa0027120:five_prime_UTR 30.0%
!! CATTTGTTGGTGAACAATTT+TGG - chr1_1:51398282-51398301 Msa0027120:five_prime_UTR 30.0%
TTATGACAACTAGAGAAGCA+AGG - chr1_1:51393259-51393278 Msa0027120:CDS 35.0%
! AACTGCTTCTCTCTTTTTCT+TGG - chr1_1:51393292-51393311 Msa0027120:CDS 35.0%
! TTCTCTCTTTTTCTTGGCAA+TGG - chr1_1:51393298-51393317 Msa0027120:CDS 35.0%
! TTCTGAATTGAGTTGTAGAG+TGG + chr1_1:51393353-51393372 None:intergenic 35.0%
!!! GGTTAACATTTTTGGGGTTA+AGG - chr1_1:51393491-51393510 Msa0027120:intron 35.0%
GAACATCATACATACCATCA+GGG + chr1_1:51393702-51393721 None:intergenic 35.0%
AGAACATCATACATACCATC+AGG + chr1_1:51393703-51393722 None:intergenic 35.0%
GATGGTATGTATGATGTTCT+TGG - chr1_1:51393703-51393722 Msa0027120:intron 35.0%
TACTAGAATTGTGGAGTAAC+AGG - chr1_1:51393775-51393794 Msa0027120:intron 35.0%
TGTTCAAGATTTCAAGGTCA+GGG + chr1_1:51393939-51393958 None:intergenic 35.0%
ATGTTCAAGATTTCAAGGTC+AGG + chr1_1:51393940-51393959 None:intergenic 35.0%
GCCACTTCTTTAATTATCCA+TGG - chr1_1:51394056-51394075 Msa0027120:intron 35.0%
CAAATGTTGACCATTGAATG+AGG + chr1_1:51394099-51394118 None:intergenic 35.0%
! AGTTTTCCCAAAGAAAATGG+TGG - chr1_1:51394293-51394312 Msa0027120:intron 35.0%
! GTTTTCCCAAAGAAAATGGT+GGG - chr1_1:51394294-51394313 Msa0027120:intron 35.0%
!! TGATTGAATAAATGATGGGC+AGG + chr1_1:51394591-51394610 None:intergenic 35.0%
! ATTTTCCTTAGTTCCCCTAA+TGG - chr1_1:51394975-51394994 Msa0027120:intron 35.0%
ATTGTGTGACCCAGATTTAA+TGG + chr1_1:51395044-51395063 None:intergenic 35.0%
CATTAATGGCCCAGATTTAA+TGG - chr1_1:51395110-51395129 Msa0027120:intron 35.0%
AATACGTTACCACCTAACAA+CGG + chr1_1:51395167-51395186 None:intergenic 35.0%
AGACGATCTAGAAACTTCTA+GGG + chr1_1:51395319-51395338 None:intergenic 35.0%
AAGACGATCTAGAAACTTCT+AGG + chr1_1:51395320-51395339 None:intergenic 35.0%
AGGAGGTTAATAGGGTTAAT+AGG - chr1_1:51395487-51395506 Msa0027120:intron 35.0%
TAGGGTTAATAGGTCATTGA+TGG - chr1_1:51395497-51395516 Msa0027120:intron 35.0%
TTGAATTGAGCCTAAAAGAG+AGG + chr1_1:51395731-51395750 None:intergenic 35.0%
! CTCTTTTAGGCTCAATTCAA+AGG - chr1_1:51395731-51395750 Msa0027120:intron 35.0%
CCCAAGTTAAACCAAACAAT+TGG + chr1_1:51395968-51395987 None:intergenic 35.0%
ATGGGGATAATGTTCAAAAC+TGG - chr1_1:51396082-51396101 Msa0027120:intron 35.0%
TTCCAAATGAATACACCGAA+AGG + chr1_1:51396164-51396183 None:intergenic 35.0%
CACGTCAAAAAAATGGACAT+TGG + chr1_1:51396345-51396364 None:intergenic 35.0%
! ATTAACATTTTATGAGGGGG+GGG - chr1_1:51396794-51396813 Msa0027120:intron 35.0%
GGGGTTAAATTTCAAAAGTG+GGG - chr1_1:51396830-51396849 Msa0027120:intron 35.0%
!! CTATTTAGTTGGCTTGTACA+TGG - chr1_1:51396907-51396926 Msa0027120:intron 35.0%
AATGGTTAACACTTAAGAGG+AGG + chr1_1:51397042-51397061 None:intergenic 35.0%
! TTCATTGATCCGATTTGAGT+AGG - chr1_1:51397252-51397271 Msa0027120:intron 35.0%
TTCATCTAAACACTCTTGGA+TGG - chr1_1:51397381-51397400 Msa0027120:CDS 35.0%
GAAGAGTCCGAAAAAACAAT+TGG - chr1_1:51397587-51397606 Msa0027120:intron 35.0%
CGAAAAAACAATTGGCTAGT+TGG - chr1_1:51397595-51397614 Msa0027120:intron 35.0%
TACATTGGTAAAGTCGATCT+TGG - chr1_1:51397650-51397669 Msa0027120:intron 35.0%
TTCTTATACTAGCTGGAGAA+AGG - chr1_1:51397750-51397769 Msa0027120:intron 35.0%
! GGTGTGTTTTCCTAAAGATA+AGG - chr1_1:51397771-51397790 Msa0027120:intron 35.0%
! TGTTTTCCTAAAGATAAGGG+AGG - chr1_1:51397775-51397794 Msa0027120:intron 35.0%
! GTTTTCCTAAAGATAAGGGA+GGG - chr1_1:51397776-51397795 Msa0027120:intron 35.0%
CTGTAATGTGACATTGTACT+TGG + chr1_1:51397893-51397912 None:intergenic 35.0%
!! ACAACATATACTCAAGTTGG+TGG - chr1_1:51397928-51397947 Msa0027120:intron 35.0%
CACAACTTATCATAGTTCTC+TGG - chr1_1:51397993-51398012 Msa0027120:intron 35.0%
TCTCACAAGTTAGGTAACAA+TGG - chr1_1:51398023-51398042 Msa0027120:intron 35.0%
! GTGTGGTCATATTGATGATA+TGG - chr1_1:51398073-51398092 Msa0027120:intron 35.0%
! ATATTGATGATATGGGTTGC+CGG - chr1_1:51398081-51398100 Msa0027120:intron 35.0%
! TGAGACACACTCTTTTTGAT+TGG - chr1_1:51398128-51398147 Msa0027120:intron 35.0%
!! GAGACACACTCTTTTTGATT+GGG - chr1_1:51398129-51398148 Msa0027120:intron 35.0%
!! TTGTTGGTGAACAATTTTGG+TGG - chr1_1:51398285-51398304 Msa0027120:five_prime_UTR 35.0%
!! TGTTGGTGAACAATTTTGGT+GGG - chr1_1:51398286-51398305 Msa0027120:five_prime_UTR 35.0%
! AATTGAGTTGTAGAGTGGAG+AGG + chr1_1:51393348-51393367 None:intergenic 40.0%
TAATATAGCTTCCACCCTGA+TGG - chr1_1:51393685-51393704 Msa0027120:intron 40.0%
ATGTTCTTGGCAACACTCTA+TGG - chr1_1:51393716-51393735 Msa0027120:intron 40.0%
CAACACTCTATGGAACAGAA+TGG - chr1_1:51393726-51393745 Msa0027120:intron 40.0%
TCTATGGAACAGAATGGCAT+TGG - chr1_1:51393732-51393751 Msa0027120:intron 40.0%
CTATGGAACAGAATGGCATT+GGG - chr1_1:51393733-51393752 Msa0027120:intron 40.0%
GTTCAAGATTTCAAGGTCAG+GGG + chr1_1:51393938-51393957 None:intergenic 40.0%
ATTTGCATGTGCCAAGTTTG+AGG - chr1_1:51394114-51394133 Msa0027120:intron 40.0%
ATCATCGGTAACCTCAAACT+TGG + chr1_1:51394128-51394147 None:intergenic 40.0%
! AAGGTATCTAAGGGTGTGTT+TGG + chr1_1:51394412-51394431 None:intergenic 40.0%
!! TTCCCCTAATGGTGTTGTTA+GGG - chr1_1:51394986-51395005 Msa0027120:intron 40.0%
!! TAGCACTTTGGTGCCAATAA+TGG - chr1_1:51395011-51395030 Msa0027120:intron 40.0%
!! TAATGGTACGGTGCCATTAT+TGG + chr1_1:51395027-51395046 None:intergenic 40.0%
GTGACCCAGATTTAATGGTA+CGG + chr1_1:51395039-51395058 None:intergenic 40.0%
AATCACATTGCCATTGCATC+TGG - chr1_1:51395061-51395080 Msa0027120:intron 40.0%
ATCACATTGCCATTGCATCT+GGG - chr1_1:51395062-51395081 Msa0027120:intron 40.0%
ACCAAGATAGATGTGTTGTG+TGG + chr1_1:51395088-51395107 None:intergenic 40.0%
!! TAGCACTTTGGTGCCATTAA+TGG + chr1_1:51395143-51395162 None:intergenic 40.0%
ATACGTTACCACCTAACAAC+GGG + chr1_1:51395166-51395185 None:intergenic 40.0%
! TAGGTGGTAACGTATTTCCA+CGG - chr1_1:51395171-51395190 Msa0027120:intron 40.0%
TTCCACGGAAGCAAATTAGA+TGG - chr1_1:51395186-51395205 Msa0027120:intron 40.0%
!! TACCATCTAATTTGCTTCCG+TGG + chr1_1:51395191-51395210 None:intergenic 40.0%
ACGGAAGCAAATTAGATGGT+AGG - chr1_1:51395190-51395209 Msa0027120:intron 40.0%
TCTCTCTTTAGGTGTTTAGC+CGG - chr1_1:51395285-51395304 Msa0027120:intron 40.0%
! AACTTCTAGGGGAAAAACAC+CGG + chr1_1:51395307-51395326 None:intergenic 40.0%
GACGATCTAGAAACTTCTAG+GGG + chr1_1:51395318-51395337 None:intergenic 40.0%
TTGTAAATGTGATTGGAGGG+AGG - chr1_1:51395467-51395486 Msa0027120:intron 40.0%
TGATGGAATTAGAGAATCGC+TGG - chr1_1:51395514-51395533 Msa0027120:intron 40.0%
!! TCCTTTTCATTTGGAACGAG+AGG - chr1_1:51395652-51395671 Msa0027120:intron 40.0%
!! CCTTTTCATTTGGAACGAGA+GGG - chr1_1:51395653-51395672 Msa0027120:intron 40.0%
!! CTTTTCATTTGGAACGAGAG+GGG - chr1_1:51395654-51395673 Msa0027120:intron 40.0%
!! TTTTCATTTGGAACGAGAGG+GGG - chr1_1:51395655-51395674 Msa0027120:intron 40.0%
! AAGACCATGACCTCTCTTTT+AGG - chr1_1:51395718-51395737 Msa0027120:intron 40.0%
! ACGAGTTGAGTCCAATTGTT+TGG - chr1_1:51395954-51395973 Msa0027120:intron 40.0%
ATGCTTGCAATGAATTGTGG+AGG - chr1_1:51396117-51396136 Msa0027120:intron 40.0%
TGAAGTGACGTTTCTCCTTT+CGG - chr1_1:51396146-51396165 Msa0027120:intron 40.0%
! CTCCTTTCGGTGTATTCATT+TGG - chr1_1:51396159-51396178 Msa0027120:intron 40.0%
! TTTAGGTATCGTTGTTTGCC+TGG - chr1_1:51396199-51396218 Msa0027120:intron 40.0%
! GATTTAAGATCGTGCATGAG+AGG - chr1_1:51396285-51396304 Msa0027120:intron 40.0%
! AACCACGACTTTGTGTTGAT+TGG - chr1_1:51396369-51396388 Msa0027120:intron 40.0%
!! ACCACGACTTTGTGTTGATT+GGG - chr1_1:51396370-51396389 Msa0027120:intron 40.0%
!!! TGTTTTTAAGTGGTGCAGGT+TGG - chr1_1:51396616-51396635 Msa0027120:intron 40.0%
!! GGCTTTAAACTTGTGAAGCA+GGG + chr1_1:51396664-51396683 None:intergenic 40.0%
!! TGGCTTTAAACTTGTGAAGC+AGG + chr1_1:51396665-51396684 None:intergenic 40.0%
! TTAACATTTTATGAGGGGGG+GGG - chr1_1:51396795-51396814 Msa0027120:intron 40.0%
GAACACTCAATTCCTGATGA+AGG + chr1_1:51396996-51397015 None:intergenic 40.0%
GTGTTCTGTTAGTAAGAACG+TGG - chr1_1:51397010-51397029 Msa0027120:intron 40.0%
TATTGCGGTCCTACTCAAAT+CGG + chr1_1:51397264-51397283 None:intergenic 40.0%
TGCAAGAGCTTCTCTTATTG+CGG + chr1_1:51397279-51397298 None:intergenic 40.0%
!! GATGCTTTATTTCCAGGGAT+TGG - chr1_1:51397312-51397331 Msa0027120:intron 40.0%
TGTGAATGACGAATTCTTGC+AGG - chr1_1:51397457-51397476 Msa0027120:CDS 40.0%
GAGGAACTTCTTATACTAGC+TGG - chr1_1:51397743-51397762 Msa0027120:intron 40.0%
AAGTTGTGTTGTGTAGTAGC+AGG + chr1_1:51397981-51398000 None:intergenic 40.0%
GGCTATGTATCTCACAAGTT+AGG - chr1_1:51398014-51398033 Msa0027120:intron 40.0%
ACAATGGTGACATGTTTGTC+TGG - chr1_1:51398039-51398058 Msa0027120:intron 40.0%
! TATTGATGATATGGGTTGCC+GGG - chr1_1:51398082-51398101 Msa0027120:intron 40.0%
TTGATTGGGATGAAGAGCAA+TGG - chr1_1:51398143-51398162 Msa0027120:intron 40.0%
TGATTGGGATGAAGAGCAAT+GGG - chr1_1:51398144-51398163 Msa0027120:intron 40.0%
!!! TGCAGACTTTTTTTCGTTGC+AGG - chr1_1:51398173-51398192 Msa0027120:CDS 40.0%
! ATTTGGGATTGTGATAGCAG+TGG - chr1_1:51398231-51398250 Msa0027120:five_prime_UTR 40.0%
TTTGTACCTGAGTATGAGCG+TGG + chr1_1:51393377-51393396 None:intergenic 45.0%
CATCATACATACCATCAGGG+TGG + chr1_1:51393699-51393718 None:intergenic 45.0%
ATTTCAAGGTCAGGGGTCAA+GGG + chr1_1:51393931-51393950 None:intergenic 45.0%
AAAAACTCCCATGCACATGC+CGG - chr1_1:51394154-51394173 Msa0027120:intron 45.0%
CAACACCATTAGGGGAACTA+AGG + chr1_1:51394983-51395002 None:intergenic 45.0%
!! GTTCCCCTAATGGTGTTGTT+AGG - chr1_1:51394985-51395004 Msa0027120:intron 45.0%
!! TCCCCTAATGGTGTTGTTAG+GGG - chr1_1:51394987-51395006 Msa0027120:intron 45.0%
ACCCCCTAACAACACCATTA+GGG + chr1_1:51394992-51395011 None:intergenic 45.0%
TACCCCCTAACAACACCATT+AGG + chr1_1:51394993-51395012 None:intergenic 45.0%
TGGCACCGTACCATTAAATC+TGG - chr1_1:51395031-51395050 Msa0027120:intron 45.0%
GGCACCGTACCATTAAATCT+GGG - chr1_1:51395032-51395051 Msa0027120:intron 45.0%
GCCACACAACACATCTATCT+TGG - chr1_1:51395084-51395103 Msa0027120:intron 45.0%
ATGGCCCAGATTTAATGGCA+CGG - chr1_1:51395115-51395134 Msa0027120:intron 45.0%
!! TAATGGCACGGTGCCATTAA+TGG - chr1_1:51395127-51395146 Msa0027120:intron 45.0%
TAAATGTGATTGGAGGGAGG+AGG - chr1_1:51395470-51395489 Msa0027120:intron 45.0%
ATTGGAGGGAGGAGGTTAAT+AGG - chr1_1:51395478-51395497 Msa0027120:intron 45.0%
TTGGAGGGAGGAGGTTAATA+GGG - chr1_1:51395479-51395498 Msa0027120:intron 45.0%
CCCTCTCGTTCCAAATGAAA+AGG + chr1_1:51395656-51395675 None:intergenic 45.0%
TGAGCCTAAAAGAGAGGTCA+TGG + chr1_1:51395725-51395744 None:intergenic 45.0%
CCTATTATTCACCAACCTCC+AGG + chr1_1:51396220-51396239 None:intergenic 45.0%
!! CCTGGAGGTTGGTGAATAAT+AGG - chr1_1:51396217-51396236 Msa0027120:intron 45.0%
AAAATCGCATCCTCCCAACA+TGG - chr1_1:51396563-51396582 Msa0027120:intron 45.0%
AAAGACATAGCCATGTTGGG+AGG + chr1_1:51396576-51396595 None:intergenic 45.0%
! TAACATTTTATGAGGGGGGG+GGG - chr1_1:51396796-51396815 Msa0027120:intron 45.0%
ATGGATTCGAATCCAATCCC+TGG + chr1_1:51397327-51397346 None:intergenic 45.0%
!! TTTTTCGGACTCTTCACCAG+TGG + chr1_1:51397582-51397601 None:intergenic 45.0%
AGTCACCAACTATCCATCGA+AGG - chr1_1:51397621-51397640 Msa0027120:intron 45.0%
GTCACCAACTATCCATCGAA+GGG - chr1_1:51397622-51397641 Msa0027120:intron 45.0%
CAATGTAACTCTCCCTTCGA+TGG + chr1_1:51397637-51397656 None:intergenic 45.0%
CATCGAAGGGAGAGTTACAT+TGG - chr1_1:51397635-51397654 Msa0027120:intron 45.0%
CTAAAGATAAGGGAGGGCTA+GGG - chr1_1:51397782-51397801 Msa0027120:intron 45.0%
TAAAGATAAGGGAGGGCTAG+GGG - chr1_1:51397783-51397802 Msa0027120:intron 45.0%
TTGTACTTGGCATGCATGAC+AGG + chr1_1:51397880-51397899 None:intergenic 45.0%
TGTTTGTCTGGTCTGAACTG+TGG - chr1_1:51398051-51398070 Msa0027120:intron 45.0%
CAGTTCCAATTCCGTTATCC+CGG + chr1_1:51398103-51398122 None:intergenic 45.0%
!!! TATATTTTTTTAACTTTATA+CGG + chr1_1:51396721-51396740 None:intergenic 5.0%
GATTTCAAGGTCAGGGGTCA+AGG + chr1_1:51393932-51393951 None:intergenic 50.0%
!! GAATAAATGATGGGCAGGCG+TGG + chr1_1:51394586-51394605 None:intergenic 50.0%
CCCCCTAACAACACCATTAG+GGG + chr1_1:51394991-51395010 None:intergenic 50.0%
!! CCCCTAATGGTGTTGTTAGG+GGG - chr1_1:51394988-51395007 Msa0027120:intron 50.0%
GTTGTTAGGGGGTAGCACTT+TGG - chr1_1:51394999-51395018 Msa0027120:intron 50.0%
! GGCACCGTGCCATTAAATCT+GGG + chr1_1:51395122-51395141 None:intergenic 50.0%
! TGGCACCGTGCCATTAAATC+TGG + chr1_1:51395123-51395142 None:intergenic 50.0%
CCTAACAACGGGTAGCACTT+TGG + chr1_1:51395155-51395174 None:intergenic 50.0%
! CCAAAGTGCTACCCGTTGTT+AGG - chr1_1:51395152-51395171 Msa0027120:intron 50.0%
AAGTGCTACCCGTTGTTAGG+TGG - chr1_1:51395155-51395174 Msa0027120:intron 50.0%
AAACTGTGGGGGCAAGAAGA+AGG - chr1_1:51395594-51395613 Msa0027120:intron 50.0%
! ATTTGGAACGAGAGGGGGTA+GGG - chr1_1:51395660-51395679 Msa0027120:intron 50.0%
! AGGTATCGTTGTTTGCCTGG+AGG - chr1_1:51396202-51396221 Msa0027120:intron 50.0%
ATCGTTGTTTGCCTGGAGGT+TGG - chr1_1:51396206-51396225 Msa0027120:intron 50.0%
AAGATCGTGCATGAGAGGTG+TGG - chr1_1:51396290-51396309 Msa0027120:intron 50.0%
! GCATGAGAGGTGTGGTATAG+AGG - chr1_1:51396298-51396317 Msa0027120:intron 50.0%
GCCCAATCAACACAAAGTCG+TGG + chr1_1:51396374-51396393 None:intergenic 50.0%
! GGGAGGATGCGATTTTGTGA+GGG + chr1_1:51396559-51396578 None:intergenic 50.0%
! TGGGAGGATGCGATTTTGTG+AGG + chr1_1:51396560-51396579 None:intergenic 50.0%
CAAGATGCGACCTTCCAACA+TGG + chr1_1:51396771-51396790 None:intergenic 50.0%
CATGTTGGAAGGTCGCATCT+TGG - chr1_1:51396769-51396788 Msa0027120:intron 50.0%
! AACATTTTATGAGGGGGGGG+GGG - chr1_1:51396797-51396816 Msa0027120:intron 50.0%
CTCTCCCTTCGATGGATAGT+TGG + chr1_1:51397629-51397648 None:intergenic 50.0%
CCTAGCCCTCCCTTATCTTT+AGG + chr1_1:51397784-51397803 None:intergenic 50.0%
CCTAAAGATAAGGGAGGGCT+AGG - chr1_1:51397781-51397800 Msa0027120:intron 50.0%
AGTAGCAGGAAAGTCCTCGA+TGG + chr1_1:51397967-51397986 None:intergenic 50.0%
! GATATGGGTTGCCGGGATAA+CGG - chr1_1:51398089-51398108 Msa0027120:intron 50.0%
!! CGGGATAACGGAATTGGAAC+TGG - chr1_1:51398101-51398120 Msa0027120:intron 50.0%
CAGAAGCCACGCTCATACTC+AGG - chr1_1:51393368-51393387 Msa0027120:CDS 55.0%
!! TAAATGATGGGCAGGCGTGG+AGG + chr1_1:51394583-51394602 None:intergenic 55.0%
GTTGTGTGGCCCAGATGCAA+TGG + chr1_1:51395074-51395093 None:intergenic 55.0%
! CATTTGGAACGAGAGGGGGT+AGG - chr1_1:51395659-51395678 Msa0027120:intron 55.0%
GAGACCGCATCCCCATAATG+CGG - chr1_1:51396638-51396657 Msa0027120:intron 55.0%
TGAAGCAGGGCCGCATTATG+GGG + chr1_1:51396651-51396670 None:intergenic 55.0%
GTGAAGCAGGGCCGCATTAT+GGG + chr1_1:51396652-51396671 None:intergenic 55.0%
TGTGAAGCAGGGCCGCATTA+TGG + chr1_1:51396653-51396672 None:intergenic 55.0%
! ACATTTTATGAGGGGGGGGG+GGG - chr1_1:51396798-51396817 Msa0027120:intron 55.0%
! CCAAGTAGCCTTAAGCCGGA+GGG + chr1_1:51397556-51397575 None:intergenic 55.0%
! GCAGCCAAGTAGCCTTAAGC+CGG + chr1_1:51397560-51397579 None:intergenic 55.0%
TAAGGCTACTTGGCTGCCAC+TGG - chr1_1:51397563-51397582 Msa0027120:intron 55.0%
!! CTCAAGTTGGTGGCGCAATC+TGG - chr1_1:51397938-51397957 Msa0027120:intron 55.0%
AGCAGGAAAGTCCTCGATGG+AGG + chr1_1:51397964-51397983 None:intergenic 55.0%
GTCTGGTCTGAACTGTGGTG+TGG - chr1_1:51398056-51398075 Msa0027120:intron 55.0%
!! GGTTGCCGGGATAACGGAAT+TGG - chr1_1:51398095-51398114 Msa0027120:intron 55.0%
GAACGAGAGGGGGTAGGGTT+TGG - chr1_1:51395665-51395684 Msa0027120:intron 60.0%
AGGGCCGCATTATGGGGATG+CGG + chr1_1:51396645-51396664 None:intergenic 60.0%
! CATTTTATGAGGGGGGGGGG+GGG - chr1_1:51396799-51396818 Msa0027120:intron 60.0%
! ATTTTATGAGGGGGGGGGGG+GGG - chr1_1:51396800-51396819 Msa0027120:intron 60.0%
! GTAGCCTTAAGCCGGAGGGT+TGG + chr1_1:51397552-51397571 None:intergenic 60.0%
CCCTCCGGCTTAAGGCTACT+TGG - chr1_1:51397553-51397572 Msa0027120:intron 60.0%
! GCCAAGTAGCCTTAAGCCGG+AGG + chr1_1:51397557-51397576 None:intergenic 60.0%
TAAGGGAGGGCTAGGGGAGA+TGG - chr1_1:51397789-51397808 Msa0027120:intron 60.0%
! TTTTATGAGGGGGGGGGGGG+GGG - chr1_1:51396801-51396820 Msa0027120:intron 65.0%
GCCTGTTGGAGCCAACCCTC+CGG - chr1_1:51397538-51397557 Msa0027120:intron 65.0%
GGAGCCAACCCTCCGGCTTA+AGG - chr1_1:51397545-51397564 Msa0027120:intron 65.0%
GCGCAATCTGGCCTCCATCG+AGG - chr1_1:51397950-51397969 Msa0027120:intron 65.0%
TTTATGAGGGGGGGGGGGGG+GGG - chr1_1:51396802-51396821 Msa0027120:intron 70.0%
!! GCCGGAGGGTTGGCTCCAAC+AGG + chr1_1:51397542-51397561 None:intergenic 70.0%
TTATGAGGGGGGGGGGGGGG+GGG - chr1_1:51396803-51396822 Msa0027120:intron 75.0%
! GGGGGGGGGGGGGGGGATAT+GGG - chr1_1:51396810-51396829 Msa0027120:intron 80.0%
! GGGGGGGGGGGGGGGATATG+GGG - chr1_1:51396811-51396830 Msa0027120:intron 80.0%
! GGGGGGGGGGGGGGGGGATA+TGG - chr1_1:51396809-51396828 Msa0027120:intron 85.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51393212 51398335 51393212 ID=Msa0027120;Name=Msa0027120
chr1_1 mRNA 51393212 51398335 51393212 ID=Msa0027120-mRNA-1;Parent=Msa0027120;Name=Msa0027120-mRNA-1;_AED=0.55;_eAED=0.73;_QI=105|0|0.25|0.5|1|1|4|0|145
chr1_1 exon 51393212 51393389 51393212 ID=Msa0027120-mRNA-1:exon:15083;Parent=Msa0027120-mRNA-1
chr1_1 exon 51393776 51393843 51393776 ID=Msa0027120-mRNA-1:exon:15082;Parent=Msa0027120-mRNA-1
chr1_1 exon 51397372 51397490 51397372 ID=Msa0027120-mRNA-1:exon:15081;Parent=Msa0027120-mRNA-1
chr1_1 exon 51398158 51398335 51398158 ID=Msa0027120-mRNA-1:exon:15080;Parent=Msa0027120-mRNA-1
chr1_1 five_prime_UTR 51398231 51398335 51398231 ID=Msa0027120-mRNA-1:five_prime_utr;Parent=Msa0027120-mRNA-1
chr1_1 CDS 51398158 51398230 51398158 ID=Msa0027120-mRNA-1:cds;Parent=Msa0027120-mRNA-1
chr1_1 CDS 51397372 51397490 51397372 ID=Msa0027120-mRNA-1:cds;Parent=Msa0027120-mRNA-1
chr1_1 CDS 51393776 51393843 51393776 ID=Msa0027120-mRNA-1:cds;Parent=Msa0027120-mRNA-1
chr1_1 CDS 51393212 51393389 51393212 ID=Msa0027120-mRNA-1:cds;Parent=Msa0027120-mRNA-1
Gene Sequence

>Msa0027120

ATGGCAACTATGCACTCTCTTGCATTCTCCTCTCCACTCTACAACTCAATTCAGAAGCCACGCTCATACTCAGCCACTTCTTTAATTATCCATGGAAGTTTGAACTTAAATTCCTCATTCAATGGTCAACATTTGCATGTGCCAAGTTTGAGGTTACCGATGATTACTCAAAAAACTCCCATGCACATGCCGAGCTTCCAAAGATGTGACCAAAGCATTTATCAAAATTTAGAGGAACTTCTTATACTAGCTGGAGAAAGAGCAATGGGTCAAGCTGCAGACTTTTTTTCGTTGCAGGAACTTAGTATTCAGCTAGACATATTGGATTCATGCATTTGGGATTGTGATAGCAGTGGCTGCTACACAATAAAATCAGCATATCAACATTTGTTGGTGAACAATTTTGGTGGGAGTGTAAACCAGCACCAACACAACTGA

Protein sequence

>Msa0027120

MATMHSLAFSSPLYNSIQKPRSYSATSLIIHGSLNLNSSFNGQHLHVPSLRLPMITQKTPMHMPSFQRCDQSIYQNLEELLILAGERAMGQAADFFSLQELSIQLDILDSCIWDCDSSGCYTIKSAYQHLLVNNFGGSVNQHQHN*