AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0011490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011490 MtrunA17_Chr1g0159971 85.028 354 19 2 1 320 15 368 0.0 601
Msa0011490 MtrunA17_Chr1g0159971 61.032 349 83 2 596 892 43 390 1.73e-141 426
Msa0011490 MtrunA17_Chr1g0159971 70.260 269 78 1 328 594 24 292 5.63e-127 388
Msa0011490 MtrunA17_Chr1g0159991 80.000 350 17 2 595 892 31 379 0.0 548
Msa0011490 MtrunA17_Chr1g0159991 87.179 273 35 0 322 594 9 281 1.26e-162 479
Msa0011490 MtrunA17_Chr1g0159991 61.473 353 101 2 1 320 7 357 6.44e-144 431
Msa0011490 MtrunA17_Chr1g0159981 95.604 273 12 0 322 594 19 291 0.0 530
Msa0011490 MtrunA17_Chr1g0159981 72.701 348 42 2 597 892 43 389 2.73e-168 494
Msa0011490 MtrunA17_Chr1g0159981 63.610 349 91 3 6 320 21 367 3.38e-147 440
Msa0011490 MtrunA17_Chr1g0160011 71.714 350 44 3 595 892 35 381 6.30e-164 483
Msa0011490 MtrunA17_Chr1g0160011 82.847 274 46 1 322 594 12 285 1.26e-150 449
Msa0011490 MtrunA17_Chr1g0160011 61.932 352 96 4 3 320 12 359 2.38e-141 425
Msa0011490 MtrunA17_Chr1g0160031 70.286 350 49 3 595 892 34 380 5.62e-163 480
Msa0011490 MtrunA17_Chr1g0160031 78.545 275 59 0 320 594 10 284 3.37e-145 434
Msa0011490 MtrunA17_Chr1g0160031 58.120 351 110 3 3 320 12 358 2.12e-135 409
Msa0011490 MtrunA17_Chr1g0160101 63.842 354 92 3 2 321 14 365 1.24e-148 444
Msa0011490 MtrunA17_Chr1g0160101 55.271 351 103 3 595 892 37 386 6.62e-122 374
Msa0011490 MtrunA17_Chr1g0160101 67.871 249 77 2 348 594 41 288 2.93e-106 333
Msa0011490 MtrunA17_Chr7g0254461 51.966 356 133 4 4 321 14 369 1.58e-124 381
Msa0011490 MtrunA17_Chr7g0254461 50.425 353 120 4 595 892 38 390 3.56e-114 354
Msa0011490 MtrunA17_Chr7g0254461 54.513 277 123 2 321 594 15 291 3.08e-95 305
Msa0011490 MtrunA17_Chr8g0381581 50.992 353 135 3 7 323 17 367 4.51e-117 362
Msa0011490 MtrunA17_Chr8g0381581 50.000 352 120 4 593 889 33 383 1.44e-108 340
Msa0011490 MtrunA17_Chr8g0381581 44.350 354 186 5 325 672 16 364 2.24e-91 294
Msa0011490 MtrunA17_Chr7g0226941 46.398 347 142 6 14 322 16 356 2.98e-91 293
Msa0011490 MtrunA17_Chr7g0226941 42.416 356 141 7 595 892 28 377 5.80e-81 266
Msa0011490 MtrunA17_Chr7g0226941 51.587 252 116 3 348 594 32 282 4.62e-74 248
Msa0011490 MtrunA17_Chr6g0450701 42.222 360 149 9 7 320 9 355 1.54e-78 259
Msa0011490 MtrunA17_Chr6g0450701 37.179 390 161 10 567 892 8 377 4.73e-68 231
Msa0011490 MtrunA17_Chr6g0450701 44.314 255 126 5 348 594 38 284 1.28e-60 211
Msa0011490 MtrunA17_Chr7g0273101 42.643 333 147 7 30 323 27 354 4.91e-75 250
Msa0011490 MtrunA17_Chr7g0273101 41.899 358 143 9 587 886 17 367 2.27e-72 243
Msa0011490 MtrunA17_Chr7g0273101 43.726 263 136 8 338 594 18 274 1.75e-58 205
Msa0011490 MtrunA17_Chr7g0226911 40.000 340 156 6 24 320 27 361 1.01e-72 244
Msa0011490 MtrunA17_Chr7g0226911 36.188 362 159 8 595 892 30 383 1.13e-64 222
Msa0011490 MtrunA17_Chr7g0226911 40.794 277 151 6 349 615 35 308 2.06e-55 196
Msa0011490 MtrunA17_Chr7g0275291 40.841 333 158 5 24 321 25 353 3.67e-72 242
Msa0011490 MtrunA17_Chr7g0275291 38.136 354 154 7 595 891 28 373 2.09e-69 235
Msa0011490 MtrunA17_Chr7g0275291 42.688 253 134 4 346 594 30 275 1.37e-55 197
Msa0011490 MtrunA17_Chr7g0226931 39.674 368 159 8 11 320 13 375 4.62e-72 243
Msa0011490 MtrunA17_Chr7g0226931 36.585 369 151 8 596 889 34 394 3.81e-66 227
Msa0011490 MtrunA17_Chr7g0226931 39.744 312 159 7 329 614 13 321 7.90e-56 198
Msa0011490 MtrunA17_Chr1g0191461 39.773 352 164 9 11 323 13 355 3.51e-69 234
Msa0011490 MtrunA17_Chr1g0191461 39.255 349 145 12 598 887 29 369 9.14e-61 211
Msa0011490 MtrunA17_Chr1g0191461 42.642 265 140 7 325 584 7 264 1.08e-56 199
Msa0011490 MtrunA17_Chr8g0347751 36.508 378 180 5 14 339 18 387 4.77e-69 234
Msa0011490 MtrunA17_Chr8g0347751 37.047 359 155 7 595 891 31 380 3.51e-66 226
Msa0011490 MtrunA17_Chr8g0347751 39.535 258 147 3 346 594 33 290 3.51e-50 182
Msa0011490 MtrunA17_Chr6g0450711 41.298 339 145 6 23 320 113 438 3.16e-68 234
Msa0011490 MtrunA17_Chr6g0450711 37.533 381 164 8 572 892 94 460 1.17e-65 227
Msa0011490 MtrunA17_Chr6g0450711 41.877 277 144 6 348 616 121 388 6.20e-56 200
Msa0011490 MtrunA17_Chr8g0352901 38.147 367 165 9 4 323 1 352 7.77e-67 228
Msa0011490 MtrunA17_Chr8g0352901 41.259 286 146 6 321 594 2 277 5.77e-60 209
Msa0011490 MtrunA17_Chr8g0352901 36.927 371 157 9 586 892 14 371 2.39e-58 204
Msa0011490 MtrunA17_Chr6g0450731 39.942 343 147 8 16 320 17 338 1.00e-66 227
Msa0011490 MtrunA17_Chr6g0450731 35.393 356 153 8 593 892 26 360 2.72e-60 209
Msa0011490 MtrunA17_Chr6g0450731 38.562 306 166 9 321 616 2 295 6.64e-56 197
Msa0011490 MtrunA17_Chr6g0450721 38.920 352 149 7 11 320 9 336 2.52e-64 220
Msa0011490 MtrunA17_Chr6g0450721 35.598 368 168 9 572 892 13 358 4.88e-60 208
Msa0011490 MtrunA17_Chr6g0450721 43.083 253 130 4 348 594 32 276 1.63e-58 204
Msa0011490 MtrunA17_Chr7g0271551 39.329 328 144 8 32 323 36 344 2.00e-61 213
Msa0011490 MtrunA17_Chr7g0271551 35.174 344 148 9 600 888 36 359 1.11e-54 194
Msa0011490 MtrunA17_Chr7g0271551 40.856 257 138 6 349 603 36 280 7.21e-52 186
Msa0011490 MtrunA17_Chr8g0339251 38.841 345 149 11 4 308 1 323 7.27e-60 207
Msa0011490 MtrunA17_Chr8g0339251 40.714 280 142 7 321 594 2 263 4.65e-57 199
Msa0011490 MtrunA17_Chr8g0339251 44.131 213 102 5 586 797 14 210 1.33e-45 167
Msa0011490 MtrunA17_Chr2g0283531 35.191 341 157 12 30 323 29 352 1.21e-47 174
Msa0011490 MtrunA17_Chr2g0283531 33.333 270 156 7 349 604 31 290 2.49e-28 117
Msa0011490 MtrunA17_Chr2g0283531 30.769 351 169 13 598 887 29 366 3.04e-26 111
Msa0011490 MtrunA17_Chr2g0283501 32.615 371 164 12 9 323 13 353 9.99e-43 160
Msa0011490 MtrunA17_Chr2g0283501 30.769 286 175 6 349 620 31 307 2.27e-24 106
Msa0011490 MtrunA17_Chr2g0283501 33.898 236 136 6 587 811 17 243 4.03e-24 105
Msa0011490 MtrunA17_Chr2g0283481 33.699 365 171 12 5 319 21 364 1.50e-42 160
Msa0011490 MtrunA17_Chr2g0283481 31.560 282 168 8 329 594 27 299 2.05e-27 115
Msa0011490 MtrunA17_Chr2g0283481 29.014 355 166 11 598 885 45 380 2.78e-27 115
Msa0011490 MtrunA17_Chr2g0317261 32.102 352 162 12 14 319 13 333 3.90e-41 155
Msa0011490 MtrunA17_Chr2g0317261 31.250 256 156 7 349 594 30 275 4.04e-25 108
Msa0011490 MtrunA17_Chr2g0317261 31.222 221 134 7 598 811 28 237 3.72e-21 96.3
Msa0011490 MtrunA17_Chr2g0317271 32.102 352 162 12 14 319 13 333 1.25e-40 153
Msa0011490 MtrunA17_Chr2g0317271 28.739 341 175 12 598 887 28 351 8.49e-26 110
Msa0011490 MtrunA17_Chr2g0317271 31.250 256 156 7 349 594 30 275 4.60e-25 107
Msa0011490 MtrunA17_Chr3g0104821 33.041 342 156 11 30 319 42 362 1.74e-40 154
Msa0011490 MtrunA17_Chr3g0104821 32.567 261 148 9 349 594 44 291 1.44e-26 113
Msa0011490 MtrunA17_Chr3g0104821 29.494 356 168 15 598 887 42 380 1.86e-25 109
Msa0011490 MtrunA17_Chr0c01g0489581 31.319 364 173 12 2 319 1 333 3.47e-40 152
Msa0011490 MtrunA17_Chr0c01g0489581 28.152 341 177 12 598 887 28 351 3.96e-25 108
Msa0011490 MtrunA17_Chr0c01g0489581 30.859 256 157 7 349 594 30 275 1.99e-24 105
Msa0011490 MtrunA17_Chr0c01g0489571 31.319 364 173 12 2 319 1 333 3.75e-40 152
Msa0011490 MtrunA17_Chr0c01g0489571 30.859 256 157 7 349 594 30 275 2.00e-24 105
Msa0011490 MtrunA17_Chr0c01g0489571 31.222 221 134 7 598 811 28 237 5.14e-21 95.9
Msa0011490 MtrunA17_Chr2g0283511 32.432 333 157 8 37 319 36 350 5.27e-39 149
Msa0011490 MtrunA17_Chr2g0283511 26.496 351 172 9 605 887 36 368 1.70e-24 106
Msa0011490 MtrunA17_Chr2g0283511 29.457 258 156 7 354 594 36 284 1.27e-23 104
Msa0011490 MtrunA17_Chr3g0112821 32.544 338 163 12 30 323 28 344 1.89e-37 144
Msa0011490 MtrunA17_Chr3g0112821 31.801 261 148 10 349 594 30 275 6.69e-24 104
Msa0011490 MtrunA17_Chr3g0112821 28.779 344 178 10 598 887 28 358 1.14e-21 97.8
Msa0011490 MtrunA17_Chr2g0301581 31.765 340 146 11 30 319 32 335 1.05e-36 142
Msa0011490 MtrunA17_Chr2g0301581 32.171 258 152 9 349 594 34 280 6.62e-23 101
Msa0011490 MtrunA17_Chr2g0301581 29.619 341 170 14 598 887 32 353 6.24e-22 98.6
Msa0011490 MtrunA17_Chr3g0093031 32.164 342 164 12 30 323 28 349 2.29e-36 141
Msa0011490 MtrunA17_Chr3g0093031 31.418 261 149 10 349 594 30 275 1.81e-22 100
Msa0011490 MtrunA17_Chr3g0093031 32.735 223 128 7 598 811 28 237 2.85e-18 87.8
Msa0011490 MtrunA17_Chr2g0301541 31.105 344 151 11 30 323 32 339 3.41e-36 140
Msa0011490 MtrunA17_Chr2g0301541 31.783 258 153 9 349 594 34 280 1.30e-21 97.8
Msa0011490 MtrunA17_Chr2g0301541 29.326 341 171 14 598 887 32 353 5.74e-21 95.9
Msa0011490 MtrunA17_Chr3g0112691 32.059 340 165 11 30 323 28 347 1.80e-35 139
Msa0011490 MtrunA17_Chr3g0112691 31.373 255 155 6 349 594 30 273 1.01e-22 101
Msa0011490 MtrunA17_Chr3g0112691 33.636 220 128 6 598 811 28 235 4.11e-19 90.5
Msa0011490 MtrunA17_Chr3g0096551 31.073 354 164 11 30 323 27 360 1.28e-33 133
Msa0011490 MtrunA17_Chr3g0096551 31.395 258 154 8 349 594 29 275 7.96e-23 101
Msa0011490 MtrunA17_Chr3g0096551 33.482 224 126 7 598 811 27 237 2.59e-20 94.4
Msa0011490 MtrunA17_Chr2g0283541 34.437 302 138 11 30 323 29 278 4.56e-32 127
Msa0011490 MtrunA17_Chr4g0057991 28.732 355 185 13 9 318 19 350 5.23e-29 120
Msa0011490 MtrunA17_Chr4g0057991 27.451 357 166 13 598 886 37 368 6.69e-24 104
Msa0011490 MtrunA17_Chr4g0057991 29.655 290 168 9 325 594 10 283 1.30e-23 103
Msa0011490 MtrunA17_Chr2g0301591 34.241 257 139 9 30 261 32 283 5.45e-28 114
Msa0011490 MtrunA17_Chr2g0301591 31.907 257 140 8 349 594 34 266 7.68e-21 94.0
Msa0011490 MtrunA17_Chr2g0301591 34.247 219 95 9 598 801 32 216 2.68e-18 86.3
Msa0011490 MtrunA17_Chr8g0344941 29.363 361 190 11 6 323 13 351 1.03e-27 116
Msa0011490 MtrunA17_Chr8g0344941 28.529 340 156 11 600 877 41 355 2.42e-24 106
Msa0011490 MtrunA17_Chr8g0344941 30.169 295 168 9 326 603 18 291 2.94e-24 105
Msa0011490 MtrunA17_Chr8g0349341 28.308 325 175 9 32 320 37 339 1.07e-25 110
Msa0011490 MtrunA17_Chr8g0349341 28.329 353 175 9 583 880 20 349 1.41e-25 109
Msa0011490 MtrunA17_Chr8g0349341 29.137 278 171 7 349 617 37 297 2.36e-21 97.1
Msa0011490 MtrunA17_Chr2g0330781 27.299 348 191 10 23 330 22 347 5.16e-25 107
Msa0011490 MtrunA17_Chr2g0330781 30.189 265 156 12 348 599 30 278 4.18e-20 93.2
Msa0011490 MtrunA17_Chr2g0330781 26.807 332 174 15 599 877 30 345 2.18e-16 82.0
Msa0011490 MtrunA17_Chr8g0349321 29.464 336 159 11 600 880 37 349 1.07e-24 107
Msa0011490 MtrunA17_Chr8g0349321 30.738 244 147 5 349 587 37 263 6.24e-22 98.6
Msa0011490 MtrunA17_Chr8g0349321 28.000 325 176 8 32 320 37 339 1.63e-21 97.4
Msa0011490 MtrunA17_Chr8g0341001 27.027 370 208 12 1 330 1 348 1.50e-24 106
Msa0011490 MtrunA17_Chr8g0341001 30.292 274 165 11 325 588 10 267 1.56e-20 94.4
Msa0011490 MtrunA17_Chr8g0341001 26.741 359 196 14 572 877 2 346 2.93e-19 90.5
Msa0011490 MtrunA17_Chr8g0349331 29.630 297 177 10 32 320 35 307 3.06e-24 105
Msa0011490 MtrunA17_Chr8g0349331 25.294 340 146 9 589 873 24 310 1.54e-15 79.0
Msa0011490 MtrunA17_Chr5g0438621 30.175 285 161 12 325 595 13 273 6.01e-23 101
Msa0011490 MtrunA17_Chr5g0438621 25.893 336 161 13 599 872 29 338 4.25e-15 77.8
Msa0011490 MtrunA17_Chr8g0349301 28.146 302 164 10 32 298 37 320 1.93e-22 99.4
Msa0011490 MtrunA17_Chr8g0349301 32.599 227 131 7 589 810 26 235 2.99e-19 89.7
Msa0011490 MtrunA17_Chr8g0349301 30.328 244 147 8 349 587 37 262 9.29e-19 88.6
Msa0011490 MtrunA17_Chr2g0301641 27.660 329 172 12 32 317 43 348 6.95e-22 99.0
Msa0011490 MtrunA17_Chr2g0301641 25.824 364 190 12 579 883 22 364 3.10e-21 97.1
Msa0011490 MtrunA17_Chr5g0438631 25.779 353 195 12 11 320 7 335 7.59e-21 95.1
Msa0011490 MtrunA17_Chr5g0438631 29.897 291 161 14 326 595 4 272 7.05e-20 92.4
Msa0011490 MtrunA17_Chr5g0438631 27.405 343 150 16 599 873 27 338 3.62e-16 81.3
Msa0011490 MtrunA17_Chr3g0120861 25.915 328 179 11 31 317 37 341 8.70e-21 95.1
Msa0011490 MtrunA17_Chr3g0120861 24.855 346 172 13 599 882 37 356 7.37e-17 83.6
Msa0011490 MtrunA17_Chr3g0120861 28.346 254 152 11 348 588 37 273 1.30e-16 82.8
Msa0011490 MtrunA17_Chr2g0294301 30.189 265 158 9 342 594 28 277 9.60e-20 92.0
Msa0011490 MtrunA17_Chr2g0294301 24.566 346 176 12 600 884 35 356 1.78e-12 70.1
Msa0011490 MtrunA17_Chr5g0438641 26.488 336 175 11 31 321 31 339 9.62e-20 92.0
Msa0011490 MtrunA17_Chr5g0438641 28.720 289 166 13 317 588 2 267 1.16e-17 85.9
Msa0011490 MtrunA17_Chr5g0438641 27.515 338 155 13 599 873 31 341 2.41e-17 84.7
Msa0011490 MtrunA17_Chr8g0344931 27.100 369 187 11 4 322 1 337 1.09e-19 92.0
Msa0011490 MtrunA17_Chr8g0344931 28.710 310 138 9 624 880 66 345 9.09e-17 83.2
Msa0011490 MtrunA17_Chr8g0344931 29.181 281 162 8 325 587 8 269 2.03e-15 79.0
Msa0011490 MtrunA17_Chr5g0405821 27.083 336 179 12 31 323 42 354 2.65e-19 90.9
Msa0011490 MtrunA17_Chr4g0027521 28.235 340 171 16 599 882 26 348 2.85e-19 90.5
Msa0011490 MtrunA17_Chr4g0027521 29.688 256 157 9 348 593 26 268 1.14e-17 85.9
Msa0011490 MtrunA17_Chr2g0294311 26.667 360 193 14 10 320 10 347 6.09e-19 89.7
Msa0011490 MtrunA17_Chr2g0294311 28.522 291 167 13 325 594 12 282 3.95e-14 75.1
Msa0011490 MtrunA17_Chr2g0301571 26.441 295 132 10 78 323 37 295 6.13e-19 89.0
Msa0011490 MtrunA17_Chr2g0301571 28.436 211 129 8 395 594 37 236 5.63e-11 65.1
Msa0011490 MtrunA17_Chr2g0301551 26.804 291 128 10 78 319 37 291 6.18e-19 89.0
Msa0011490 MtrunA17_Chr2g0301551 28.436 211 129 8 395 594 37 236 9.70e-11 64.3
Msa0011490 MtrunA17_Chr3g0104801 42.857 119 60 3 30 140 42 160 7.38e-19 85.1
Msa0011490 MtrunA17_Chr3g0104801 38.095 126 68 5 598 713 42 167 3.87e-14 71.6
Msa0011490 MtrunA17_Chr3g0104801 43.023 86 42 3 349 428 44 128 7.91e-12 65.1
Msa0011490 MtrunA17_Chr5g0432101 27.465 284 173 11 328 594 8 275 3.26e-18 87.4
Msa0011490 MtrunA17_Chr5g0432101 25.294 340 164 14 598 873 31 344 8.56e-15 77.0
Msa0011490 MtrunA17_Chr7g0275011 29.132 357 156 14 600 890 34 359 5.45e-18 87.0
Msa0011490 MtrunA17_Chr7g0275011 30.935 278 151 12 328 587 15 269 6.63e-15 77.4
Msa0011490 MtrunA17_Chr4g0046151 25.798 376 194 16 1 323 9 352 1.31e-17 85.9
Msa0011490 MtrunA17_Chr4g0046151 26.074 349 172 16 600 880 36 366 1.14e-13 73.6
Msa0011490 MtrunA17_Chr4g0046151 27.240 279 157 15 322 580 14 266 7.43e-11 65.1
Msa0011490 MtrunA17_Chr3g0104831 27.509 269 127 9 98 319 34 281 1.56e-17 84.7
Msa0011490 MtrunA17_Chr3g0131321 26.554 354 165 12 598 886 32 355 1.67e-17 85.9
Msa0011490 MtrunA17_Chr3g0131321 25.498 251 161 7 349 586 34 271 7.67e-12 68.2
Msa0011490 MtrunA17_Chr7g0274991 28.571 350 150 14 600 881 33 350 1.86e-17 85.5
Msa0011490 MtrunA17_Chr7g0274991 28.481 316 177 14 320 607 3 297 7.69e-16 80.5
Msa0011490 MtrunA17_Chr8g0374101 24.384 365 202 11 1 320 15 350 2.07e-17 85.1
Msa0011490 MtrunA17_Chr8g0374101 24.590 305 151 10 634 880 77 360 2.31e-16 82.0
Msa0011490 MtrunA17_Chr8g0374101 26.460 291 178 10 349 620 37 310 3.99e-15 78.2
Msa0011490 MtrunA17_Chr5g0396511 27.660 329 172 14 34 320 48 352 2.30e-17 85.1
Msa0011490 MtrunA17_Chr5g0396511 26.409 337 188 13 602 890 48 372 2.82e-16 82.0
Msa0011490 MtrunA17_Chr5g0396511 29.457 258 156 11 351 597 48 290 6.30e-16 80.9
Msa0011490 MtrunA17_Chr3g0086641 25.549 364 200 11 3 320 5 343 3.73e-17 84.3
Msa0011490 MtrunA17_Chr3g0086641 30.516 213 126 7 599 801 37 237 9.00e-14 73.9
Msa0011490 MtrunA17_Chr3g0105401 24.478 335 184 11 31 321 27 336 5.50e-17 83.6
Msa0011490 MtrunA17_Chr3g0105401 32.243 214 116 10 599 798 27 225 7.11e-16 80.1
Msa0011490 MtrunA17_Chr3g0105401 29.482 251 152 10 348 587 27 263 8.93e-16 80.1
Msa0011490 MtrunA17_Chr3g0077571 24.859 354 203 11 2 320 6 331 9.11e-17 83.2
Msa0011490 MtrunA17_Chr3g0077571 29.245 212 132 7 597 801 27 227 1.30e-12 70.5
Msa0011490 MtrunA17_Chr8g0380041 25.444 338 195 10 599 890 30 356 9.36e-17 83.2
Msa0011490 MtrunA17_Chr8g0380041 25.000 320 204 10 325 623 9 313 3.12e-16 81.6
Msa0011490 MtrunA17_Chr8g0380041 25.826 333 178 10 31 320 30 336 2.78e-15 78.6
Msa0011490 MtrunA17_Chr4g0068441 29.134 254 153 9 346 587 32 270 1.66e-16 82.4
Msa0011490 MtrunA17_Chr4g0068441 25.141 354 180 11 592 884 27 356 3.59e-15 78.2
Msa0011490 MtrunA17_Chr1g0189891 27.714 350 165 13 600 890 29 349 2.39e-16 82.0
Msa0011490 MtrunA17_Chr7g0275021 26.801 347 160 12 600 881 34 351 2.78e-16 81.6
Msa0011490 MtrunA17_Chr7g0275021 25.882 255 154 10 349 587 34 269 5.98e-11 65.5
Msa0011490 MtrunA17_Chr3g0092131 25.341 367 200 15 7 329 1 337 4.17e-16 81.3
Msa0011490 MtrunA17_Chr3g0092131 27.444 266 151 11 346 591 19 262 3.59e-13 72.0
Msa0011490 MtrunA17_Chr3g0092131 25.758 330 186 15 596 877 18 336 3.69e-13 72.0
Msa0011490 MtrunA17_Chr6g0457921 27.485 342 167 14 604 885 33 353 5.15e-16 80.9
Msa0011490 MtrunA17_Chr5g0420811 28.044 271 163 8 328 588 12 260 9.43e-16 79.7
Msa0011490 MtrunA17_Chr5g0420811 25.743 303 172 10 7 271 6 293 1.88e-15 79.0
Msa0011490 MtrunA17_Chr5g0420811 30.631 222 126 8 587 797 17 221 1.04e-14 76.6
Msa0011490 MtrunA17_Chr2g0284951 29.289 239 147 8 348 577 32 257 1.09e-15 80.1
Msa0011490 MtrunA17_Chr2g0284951 26.923 208 133 6 599 797 32 229 9.20e-13 70.9
Msa0011490 MtrunA17_Chr1g0156911 27.660 329 173 12 595 873 32 345 1.54e-15 79.3
Msa0011490 MtrunA17_Chr1g0156911 27.444 266 151 13 348 594 36 278 8.57e-12 67.8
Msa0011490 MtrunA17_Chr2g0285061 27.305 282 180 9 323 594 8 274 2.20e-15 79.0
Msa0011490 MtrunA17_Chr2g0285061 25.513 341 196 11 599 891 31 361 1.77e-14 76.3
Msa0011490 MtrunA17_Chr2g0284921 28.241 216 137 6 344 549 29 236 3.22e-15 78.6
Msa0011490 MtrunA17_Chr2g0284921 26.291 213 138 6 599 801 33 236 1.26e-12 70.5
Msa0011490 MtrunA17_Chr7g0273111 47.561 82 42 1 5 85 8 89 3.79e-15 72.0
Msa0011490 MtrunA17_Chr7g0273111 36.782 87 52 2 318 402 4 89 1.83e-11 61.6
Msa0011490 MtrunA17_Chr2g0284991 27.197 239 152 7 348 577 32 257 4.76e-15 78.2
Msa0011490 MtrunA17_Chr3g0142921 27.273 264 155 11 348 594 35 278 5.54e-15 77.8
Msa0011490 MtrunA17_Chr3g0142921 29.289 239 144 8 571 797 7 232 2.00e-13 72.8
Msa0011490 MtrunA17_Chr5g0434621 26.882 279 166 11 381 640 62 321 6.00e-15 77.4
Msa0011490 MtrunA17_Chr5g0434621 26.769 325 174 13 36 320 29 329 5.91e-14 74.3
Msa0011490 MtrunA17_Chr3g0099151 27.500 280 162 9 329 584 59 321 6.08e-15 78.2
Msa0011490 MtrunA17_Chr3g0099151 26.667 345 166 12 599 880 86 406 7.73e-15 77.8
Msa0011490 MtrunA17_Chr3g0099151 25.797 345 165 17 31 319 86 395 2.90e-13 72.8
Msa0011490 MtrunA17_Chr4g0008851 26.050 357 169 13 600 890 32 359 6.70e-15 77.4
Msa0011490 MtrunA17_Chr4g0008851 26.667 285 171 12 320 587 4 267 2.61e-12 69.7
Msa0011490 MtrunA17_Chr1g0156921 25.767 326 180 13 595 871 37 349 6.77e-15 77.4
Msa0011490 MtrunA17_Chr1g0156921 24.662 296 172 12 323 594 16 284 3.76e-11 65.9
Msa0011490 MtrunA17_Chr8g0371481 25.714 280 175 11 348 612 40 301 7.97e-15 77.4
Msa0011490 MtrunA17_Chr8g0371481 24.348 345 174 13 595 877 36 355 4.64e-12 68.6
Msa0011490 MtrunA17_Chr2g0320671 25.076 327 185 10 599 877 29 343 8.10e-15 77.0
Msa0011490 MtrunA17_Chr2g0320671 27.600 250 157 7 348 587 29 264 1.04e-14 76.6
Msa0011490 MtrunA17_Chr2g0285001 27.572 243 147 9 348 577 32 258 1.75e-14 76.3
Msa0011490 MtrunA17_Chr2g0285001 28.230 209 130 7 599 797 32 230 5.14e-12 68.6
Msa0011490 MtrunA17_Chr2g0285001 24.862 362 178 15 10 318 11 331 8.10e-12 68.2
Msa0011490 MtrunA17_Chr1g0156931 28.897 263 150 11 348 594 40 281 2.04e-14 75.9
Msa0011490 MtrunA17_Chr5g0444401 26.724 348 167 16 599 883 27 349 2.34e-14 75.9
Msa0011490 MtrunA17_Chr5g0444401 26.336 262 146 10 348 586 27 264 6.95e-13 71.2
Msa0011490 MtrunA17_Chr1g0156891 27.301 326 175 13 595 871 38 350 3.32e-14 75.5
Msa0011490 MtrunA17_Chr1g0156891 28.125 288 163 14 328 594 21 285 4.22e-13 72.0
Msa0011490 MtrunA17_Chr3g0099161 26.946 334 176 14 31 320 91 400 8.71e-14 74.7
Msa0011490 MtrunA17_Chr3g0099161 27.273 286 155 10 329 584 64 326 4.28e-13 72.4
Msa0011490 MtrunA17_Chr3g0099161 26.136 352 170 16 599 885 91 417 4.25e-12 69.3
Msa0011490 MtrunA17_Chr3g0077581 27.126 247 157 7 348 583 35 269 9.16e-14 73.9
Msa0011490 MtrunA17_Chr3g0077581 28.230 209 138 6 599 801 35 237 2.43e-12 69.7
Msa0011490 MtrunA17_Chr1g0182811 28.291 357 161 15 600 890 33 360 3.75e-13 72.0
Msa0011490 MtrunA17_Chr1g0182811 29.373 303 169 13 323 603 11 290 1.36e-12 70.5
Msa0011490 MtrunA17_Chr1g0156901 25.460 326 180 12 595 871 45 356 3.75e-13 72.0
Msa0011490 MtrunA17_Chr1g0156901 24.675 308 192 13 323 612 24 309 5.72e-13 71.6
Msa0011490 MtrunA17_Chr3g0085231 28.063 253 152 9 348 587 30 265 4.65e-13 71.6
Msa0011490 MtrunA17_Chr3g0085231 28.959 221 135 6 599 809 30 238 7.71e-13 70.9
Msa0011490 MtrunA17_Chr8g0370951 25.926 297 168 11 319 588 2 273 2.22e-12 69.7
Msa0011490 MtrunA17_Chr7g0266061 23.653 334 166 12 601 877 43 344 2.43e-12 69.3
Msa0011490 MtrunA17_Chr8g0371471 24.823 282 174 12 348 612 40 300 2.77e-12 69.3
Msa0011490 MtrunA17_Chr1g0198351 24.896 241 149 7 350 587 44 255 4.35e-12 68.6
Msa0011490 MtrunA17_Chr1g0198351 28.293 205 125 6 595 799 38 220 8.92e-12 67.8
Msa0011490 MtrunA17_Chr3g0085881 24.675 308 187 9 599 872 32 328 6.67e-12 68.2
Msa0011490 MtrunA17_Chr7g0275001 26.667 300 180 12 325 603 1 281 1.01e-11 67.8
Msa0011490 MtrunA17_Chr3g0142941 28.682 258 158 12 348 594 46 288 1.41e-11 67.4
Msa0011490 MtrunA17_Chr8g0380031 27.488 211 127 7 599 797 83 279 2.57e-11 66.6
Msa0011490 MtrunA17_Chr1g0157001 25.168 298 166 11 624 877 63 347 3.01e-11 66.2
Msa0011490 MtrunA17_Chr1g0198381 29.469 207 115 7 601 802 3 183 3.36e-11 65.5
Msa0011490 MtrunA17_Chr2g0301561 28.436 211 129 8 395 594 37 236 8.76e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011490 AT1G67830.1 49.849 331 130 2 27 321 25 355 3.81e-110 343
Msa0011490 AT1G67830.1 47.230 343 125 4 593 880 23 364 2.44e-102 323
Msa0011490 AT1G67830.1 53.815 249 113 1 348 594 29 277 1.25e-88 286
Msa0011490 AT3G26430.1 47.059 357 150 3 6 323 2 358 2.93e-109 341
Msa0011490 AT3G26430.1 47.899 357 130 5 591 892 22 377 3.97e-105 330
Msa0011490 AT3G26430.1 50.182 275 135 1 322 594 4 278 7.83e-89 287
Msa0011490 AT5G14450.1 45.238 378 165 4 5 344 14 387 2.96e-103 326
Msa0011490 AT5G14450.1 41.551 361 135 7 596 892 37 385 2.59e-82 270
Msa0011490 AT5G14450.1 47.059 272 138 3 328 594 20 290 4.86e-73 245
Msa0011490 AT3G27950.1 41.573 356 158 7 4 320 3 347 1.41e-76 254
Msa0011490 AT3G27950.1 43.333 360 137 9 589 892 21 369 1.35e-75 252
Msa0011490 AT3G27950.1 46.207 290 133 8 326 604 8 285 1.35e-65 224
Msa0011490 AT1G54790.3 41.477 352 157 9 11 320 10 354 3.23e-73 246
Msa0011490 AT1G54790.3 40.634 347 142 10 598 886 30 370 2.67e-67 229
Msa0011490 AT1G54790.3 40.727 275 152 8 326 594 8 277 1.12e-56 200
Msa0011490 AT4G01130.1 36.134 357 191 3 8 328 10 365 5.06e-71 239
Msa0011490 AT4G01130.1 37.288 354 159 8 595 890 29 377 1.36e-62 216
Msa0011490 AT4G01130.1 40.370 270 158 2 327 594 12 280 3.87e-55 196
Msa0011490 AT3G05180.1 41.791 335 151 7 30 325 34 363 3.69e-67 229
Msa0011490 AT3G05180.1 38.068 352 154 8 597 890 33 378 3.62e-59 207
Msa0011490 AT3G05180.1 38.971 272 154 6 330 594 15 281 3.84e-51 184
Msa0011490 AT1G54790.1 37.500 360 177 8 2 320 1 353 1.56e-66 228
Msa0011490 AT1G54790.1 39.943 348 145 10 597 886 28 369 2.55e-65 224
Msa0011490 AT1G54790.1 40.959 271 150 7 329 594 11 276 1.39e-57 202
Msa0011490 AT1G09390.1 37.892 351 163 8 31 345 36 367 9.63e-62 214
Msa0011490 AT1G09390.1 36.243 378 165 11 569 890 8 365 5.93e-60 209
Msa0011490 AT1G09390.1 40.562 249 138 4 348 594 36 276 3.25e-51 184
Msa0011490 AT1G56670.1 36.508 378 181 10 8 345 12 370 2.38e-61 213
Msa0011490 AT1G56670.1 37.176 347 146 10 599 890 39 368 2.04e-58 205
Msa0011490 AT1G56670.1 39.228 311 175 7 323 631 16 314 9.19e-52 186
Msa0011490 AT1G54790.2 34.974 386 177 9 2 320 1 379 3.97e-61 213
Msa0011490 AT1G54790.2 40.959 271 150 7 329 594 11 276 2.69e-57 202
Msa0011490 AT1G54790.2 47.143 210 102 7 597 803 28 231 1.75e-47 175
Msa0011490 AT1G54790.2 48.148 81 41 1 807 886 315 395 1.11e-15 80.9
Msa0011490 AT4G01130.2 40.370 270 158 2 327 594 12 280 2.17e-55 195
Msa0011490 AT4G01130.2 44.298 228 117 6 595 817 29 251 2.30e-52 186
Msa0011490 AT4G01130.2 35.517 290 151 2 8 262 10 298 5.36e-52 185
Msa0011490 AT1G56670.2 40.511 274 151 5 323 594 16 279 2.97e-52 185
Msa0011490 AT1G56670.2 42.593 216 113 5 599 812 39 245 2.80e-45 165
Msa0011490 AT1G56670.2 35.714 294 142 6 8 262 12 297 9.79e-44 160
Msa0011490 AT3G62280.1 37.092 337 154 8 22 320 26 342 1.62e-51 185
Msa0011490 AT3G62280.1 35.311 354 143 12 599 891 35 363 3.39e-51 184
Msa0011490 AT3G62280.1 38.645 251 138 7 348 594 35 273 5.04e-41 155
Msa0011490 AT1G28650.1 33.604 369 172 10 7 323 12 359 3.80e-46 170
Msa0011490 AT1G28650.1 29.143 350 173 10 598 885 35 371 6.11e-28 117
Msa0011490 AT1G28650.1 31.034 290 175 6 323 594 5 287 7.09e-26 111
Msa0011490 AT1G28640.1 32.075 371 186 9 7 328 9 362 1.84e-45 169
Msa0011490 AT1G28640.1 28.612 353 171 11 598 885 33 369 6.58e-28 117
Msa0011490 AT1G28640.1 29.139 302 190 5 319 604 2 295 1.01e-26 114
Msa0011490 AT1G28600.1 33.609 363 179 11 4 319 1 348 3.33e-44 165
Msa0011490 AT1G28600.1 30.460 348 174 9 597 886 28 365 4.53e-32 129
Msa0011490 AT1G28600.1 32.069 290 164 7 325 594 4 280 3.61e-30 124
Msa0011490 AT5G45910.1 35.920 348 151 12 30 323 28 357 2.38e-43 162
Msa0011490 AT5G45910.1 31.447 318 189 8 321 620 4 310 1.54e-29 122
Msa0011490 AT5G45910.1 28.691 359 168 10 598 885 28 369 1.49e-28 119
Msa0011490 AT4G01130.3 31.429 280 155 3 85 328 1 279 6.22e-43 158
Msa0011490 AT4G01130.3 32.770 296 136 8 653 890 1 291 1.72e-38 145
Msa0011490 AT4G01130.3 36.923 195 120 2 402 594 1 194 1.40e-33 131
Msa0011490 AT1G31550.2 33.618 351 168 10 21 323 24 357 1.43e-42 160
Msa0011490 AT1G31550.2 29.630 351 173 10 597 886 33 370 4.24e-31 127
Msa0011490 AT1G31550.2 30.392 306 185 5 323 612 10 303 6.81e-27 114
Msa0011490 AT1G28670.1 31.694 366 185 11 7 323 9 358 2.12e-42 159
Msa0011490 AT1G28670.1 30.226 354 165 10 598 885 33 370 2.23e-29 121
Msa0011490 AT1G28670.1 31.507 292 177 6 319 594 2 286 7.04e-25 108
Msa0011490 AT1G28590.1 33.056 360 173 10 11 319 12 354 4.43e-42 159
Msa0011490 AT1G28590.1 31.095 283 178 5 323 594 10 286 1.04e-27 117
Msa0011490 AT1G28590.1 27.809 356 174 11 597 886 33 371 6.48e-24 105
Msa0011490 AT3G62280.2 38.645 251 138 7 348 594 35 273 9.79e-42 155
Msa0011490 AT3G62280.2 41.748 206 103 7 599 801 35 226 6.76e-39 147
Msa0011490 AT3G62280.2 35.816 282 132 5 22 266 26 295 8.34e-38 144
Msa0011490 AT1G28660.1 31.653 357 196 10 7 323 9 357 5.29e-40 152
Msa0011490 AT1G28660.1 29.730 296 176 9 319 594 2 285 3.61e-23 103
Msa0011490 AT1G28660.1 28.090 356 169 13 598 885 33 369 5.74e-22 99.8
Msa0011490 AT1G31550.1 32.571 350 170 10 21 323 24 354 1.85e-39 151
Msa0011490 AT1G31550.1 29.885 348 173 10 597 886 33 367 1.42e-31 128
Msa0011490 AT1G31550.1 30.903 288 171 5 323 594 10 285 1.73e-26 113
Msa0011490 AT2G27360.1 30.833 360 185 11 7 319 10 352 1.88e-39 151
Msa0011490 AT2G27360.1 28.612 353 176 10 597 886 30 369 3.49e-27 115
Msa0011490 AT2G27360.1 29.553 291 174 6 322 594 7 284 1.11e-23 104
Msa0011490 AT1G28660.2 31.742 356 196 11 7 323 9 356 3.71e-39 150
Msa0011490 AT1G28660.2 29.492 295 177 8 319 594 2 284 7.96e-24 105
Msa0011490 AT1G28660.2 27.606 355 171 12 598 885 33 368 2.13e-22 100
Msa0011490 AT1G28610.2 31.593 364 179 12 5 319 6 348 4.98e-39 150
Msa0011490 AT1G28610.2 30.915 317 184 7 325 624 7 305 2.10e-28 119
Msa0011490 AT1G28610.2 33.333 234 132 8 597 820 28 247 8.43e-25 108
Msa0011490 AT1G28580.1 30.110 362 188 8 10 323 15 359 5.88e-39 150
Msa0011490 AT1G28580.1 28.409 352 177 9 597 886 34 372 3.07e-31 127
Msa0011490 AT1G28580.1 28.188 298 187 6 325 604 9 297 1.49e-25 110
Msa0011490 AT1G28570.1 30.245 367 187 11 7 323 9 356 2.94e-38 147
Msa0011490 AT1G28570.1 27.557 352 180 10 597 886 31 369 1.42e-27 116
Msa0011490 AT1G28570.1 29.210 291 183 5 319 594 2 284 2.54e-26 112
Msa0011490 AT3G48460.1 28.493 365 196 11 5 323 11 356 2.71e-31 127
Msa0011490 AT3G48460.1 26.257 358 169 13 598 885 36 368 9.70e-23 102
Msa0011490 AT3G48460.1 27.157 313 193 8 326 620 15 310 1.83e-20 95.1
Msa0011490 AT1G28570.2 28.963 328 170 14 7 323 9 284 4.99e-23 101
Msa0011490 AT3G16370.1 28.779 344 173 14 31 329 29 345 8.90e-23 101
Msa0011490 AT3G16370.1 30.739 257 147 11 348 589 29 269 2.72e-20 94.0
Msa0011490 AT3G16370.1 27.301 326 172 15 599 873 29 340 2.95e-16 82.0
Msa0011490 AT1G28600.2 35.071 211 121 7 4 205 1 204 9.05e-23 98.2
Msa0011490 AT1G28600.2 35.829 187 101 6 597 774 28 204 1.35e-19 89.0
Msa0011490 AT1G28600.2 32.367 207 111 6 325 515 4 197 2.71e-18 85.1
Msa0011490 AT1G53920.1 25.620 363 205 12 4 322 15 356 1.51e-22 101
Msa0011490 AT1G53920.1 25.595 336 172 10 590 867 36 351 6.80e-18 87.4
Msa0011490 AT1G53920.1 27.737 274 170 8 325 587 22 278 6.89e-17 84.3
Msa0011490 AT1G28580.2 26.804 291 154 6 75 323 5 278 3.58e-22 98.6
Msa0011490 AT1G28580.2 24.916 297 154 7 646 886 8 291 1.20e-17 85.5
Msa0011490 AT1G28580.2 24.312 218 148 4 395 604 8 216 3.12e-12 68.9
Msa0011490 AT5G40990.1 28.235 340 166 11 600 880 37 357 1.28e-21 98.2
Msa0011490 AT5G40990.1 25.824 364 210 11 1 323 6 350 3.90e-20 94.0
Msa0011490 AT5G40990.1 30.522 249 148 8 349 587 37 270 1.02e-17 86.7
Msa0011490 AT5G03820.1 27.019 359 200 13 1 320 6 341 3.27e-21 97.1
Msa0011490 AT5G03820.1 27.843 255 154 10 348 588 32 270 1.17e-13 73.9
Msa0011490 AT5G03820.1 24.709 344 167 14 599 877 32 348 2.30e-13 73.2
Msa0011490 AT5G03820.2 27.019 359 200 13 1 320 34 369 8.70e-21 95.9
Msa0011490 AT5G03820.2 27.843 255 154 10 348 588 60 298 2.00e-13 73.6
Msa0011490 AT5G03820.2 24.709 344 167 14 599 877 60 376 2.33e-13 73.6
Msa0011490 AT2G04020.2 29.153 295 171 10 591 870 34 305 1.34e-20 94.4
Msa0011490 AT2G04020.2 29.524 210 130 7 348 550 42 240 1.22e-13 73.6
Msa0011490 AT1G71120.1 25.143 350 179 10 11 317 20 329 4.55e-20 93.6
Msa0011490 AT1G71120.1 24.518 363 165 10 588 880 19 342 1.54e-15 79.7
Msa0011490 AT1G71120.1 26.246 301 155 10 348 626 30 285 3.61e-15 78.6
Msa0011490 AT2G42990.1 26.149 348 189 12 12 317 10 331 5.62e-20 93.2
Msa0011490 AT2G42990.1 28.261 276 161 12 327 587 9 262 2.76e-17 85.1
Msa0011490 AT2G42990.1 25.882 340 164 15 599 876 27 340 3.12e-14 75.9
Msa0011490 AT1G53940.2 27.348 362 198 14 32 353 39 375 2.12e-19 91.7
Msa0011490 AT1G53940.2 28.235 340 166 12 600 880 39 359 8.45e-18 87.0
Msa0011490 AT1G53940.2 30.924 249 147 8 349 587 39 272 8.65e-15 77.8
Msa0011490 AT1G28610.1 33.019 212 118 8 5 205 6 204 3.45e-19 88.6
Msa0011490 AT1G28610.1 35.912 181 95 7 597 767 28 197 6.32e-19 87.8
Msa0011490 AT1G28610.1 32.558 215 115 6 325 522 7 208 1.13e-16 81.3
Msa0011490 AT4G10950.2 26.269 335 179 12 29 320 68 377 3.73e-19 91.3
Msa0011490 AT4G10950.2 29.008 262 158 11 348 597 70 315 7.50e-18 87.4
Msa0011490 AT4G10950.2 25.588 340 193 13 599 890 70 397 5.88e-17 84.7
Msa0011490 AT5G45670.1 24.719 356 208 7 4 320 1 335 3.96e-19 90.9
Msa0011490 AT5G45670.1 26.235 324 177 11 599 873 28 338 7.90e-14 74.7
Msa0011490 AT5G08460.1 25.770 357 191 13 9 318 28 357 4.46e-19 90.9
Msa0011490 AT5G08460.1 31.019 216 125 7 598 801 47 250 6.86e-18 87.4
Msa0011490 AT2G04020.1 30.568 229 139 8 591 811 34 250 8.03e-19 87.8
Msa0011490 AT2G04020.1 29.204 226 140 9 348 564 42 256 3.16e-14 74.3
Msa0011490 AT2G23540.1 27.635 351 157 15 600 880 48 371 9.19e-19 90.1
Msa0011490 AT2G23540.1 27.083 336 176 14 32 320 48 361 2.20e-16 82.8
Msa0011490 AT2G23540.1 27.458 295 170 13 349 620 48 321 3.67e-14 75.9
Msa0011490 AT3G14225.2 28.739 341 163 11 600 880 37 357 1.44e-18 89.4
Msa0011490 AT3G14225.2 26.923 338 187 10 32 329 37 354 1.33e-15 80.1
Msa0011490 AT3G14225.2 31.579 247 139 8 349 584 37 264 3.94e-14 75.5
Msa0011490 AT5G15720.2 27.239 268 162 8 347 598 28 278 4.17e-18 86.7
Msa0011490 AT5G15720.2 28.194 227 135 7 581 797 19 227 5.14e-14 74.3
Msa0011490 AT2G04570.1 26.761 284 178 11 325 595 4 270 5.54e-18 87.0
Msa0011490 AT2G04570.1 23.580 352 187 14 590 882 18 346 2.13e-12 70.1
Msa0011490 AT3G14225.1 28.655 342 166 12 600 880 37 361 6.99e-18 87.0
Msa0011490 AT3G14225.1 26.923 338 191 11 32 329 37 358 1.51e-15 80.1
Msa0011490 AT3G14225.1 30.800 250 141 8 349 584 37 268 5.33e-14 75.1
Msa0011490 AT5G15720.1 27.626 257 153 8 348 588 29 268 7.70e-18 86.7
Msa0011490 AT5G15720.1 24.929 353 175 11 581 873 19 341 6.85e-16 80.9
Msa0011490 AT4G26790.1 27.132 258 148 12 348 587 28 263 1.80e-17 85.5
Msa0011490 AT4G26790.1 25.439 342 167 15 598 877 27 342 1.70e-15 79.7
Msa0011490 AT4G26790.2 27.132 258 148 12 348 587 28 263 1.80e-17 85.5
Msa0011490 AT4G26790.2 25.439 342 167 15 598 877 27 342 1.70e-15 79.7
Msa0011490 AT4G10950.1 25.970 335 176 13 29 320 68 373 8.77e-17 84.0
Msa0011490 AT4G10950.1 28.626 262 155 12 348 597 70 311 1.54e-15 80.1
Msa0011490 AT4G10950.1 25.294 340 190 14 599 890 70 393 5.75e-15 78.6
Msa0011490 AT3G50400.1 25.070 355 166 14 598 880 32 358 1.14e-16 83.6
Msa0011490 AT3G50400.1 26.316 266 160 11 349 594 34 283 1.31e-11 67.8
Msa0011490 AT2G03980.2 26.347 334 180 12 587 870 30 347 3.23e-16 82.0
Msa0011490 AT2G03980.2 27.757 263 156 13 335 583 26 268 2.53e-15 79.3
Msa0011490 AT2G03980.3 26.347 334 180 12 587 870 30 347 3.23e-16 82.0
Msa0011490 AT2G03980.3 27.757 263 156 13 335 583 26 268 2.53e-15 79.3
Msa0011490 AT2G03980.1 26.347 334 180 12 587 870 30 347 3.23e-16 82.0
Msa0011490 AT2G03980.1 27.757 263 156 13 335 583 26 268 2.53e-15 79.3
Msa0011490 AT2G03980.4 26.347 334 180 12 587 870 30 347 3.23e-16 82.0
Msa0011490 AT2G03980.4 27.757 263 156 13 335 583 26 268 2.53e-15 79.3
Msa0011490 AT4G18970.2 24.316 329 189 7 31 320 27 334 3.57e-16 82.4
Msa0011490 AT4G18970.2 25.309 324 180 10 599 873 27 337 1.37e-14 77.4
Msa0011490 AT4G18970.1 24.316 329 189 7 31 320 27 334 5.15e-16 81.3
Msa0011490 AT4G18970.1 25.309 324 180 10 599 873 27 337 8.38e-15 77.4
Msa0011490 AT3G04290.1 27.841 352 150 14 600 881 29 346 6.79e-16 80.9
Msa0011490 AT3G43570.1 25.962 312 177 11 595 877 25 311 1.24e-15 79.3
Msa0011490 AT1G71691.3 28.077 260 156 9 347 594 53 293 1.37e-15 79.3
Msa0011490 AT1G71691.3 28.095 210 134 6 599 801 54 253 1.62e-12 70.1
Msa0011490 AT1G71691.3 24.910 277 166 7 20 262 43 311 3.31e-12 68.9
Msa0011490 AT1G71691.2 27.957 279 169 10 348 614 54 312 1.66e-15 80.1
Msa0011490 AT1G71691.2 24.478 335 199 9 20 320 43 357 7.36e-15 78.2
Msa0011490 AT1G71691.2 28.095 210 134 6 599 801 54 253 1.83e-12 70.5
Msa0011490 AT1G06990.1 27.018 285 179 11 348 619 36 304 2.15e-15 79.3
Msa0011490 AT1G06990.1 28.037 214 126 9 598 798 35 233 3.30e-11 66.6
Msa0011490 AT5G63170.1 28.723 282 159 12 325 588 4 261 2.53e-15 79.0
Msa0011490 AT5G63170.1 30.769 221 126 10 590 797 18 224 8.02e-15 77.4
Msa0011490 AT1G54020.2 24.691 324 174 9 33 320 34 323 3.12e-15 79.0
Msa0011490 AT1G54020.2 27.236 246 144 7 350 588 34 251 9.46e-14 74.3
Msa0011490 AT1G54020.2 24.786 351 171 13 597 890 28 342 3.98e-13 72.4
Msa0011490 AT1G53940.1 30.924 249 147 8 349 587 39 272 4.09e-15 77.8
Msa0011490 AT1G53940.1 33.649 211 117 7 600 800 39 236 6.68e-15 77.0
Msa0011490 AT1G53940.1 29.304 273 137 10 32 262 39 297 3.37e-12 68.9
Msa0011490 AT1G54030.1 27.208 283 145 10 624 870 80 337 7.12e-15 78.2
Msa0011490 AT1G54030.1 24.679 312 182 10 33 319 53 336 1.83e-13 73.9
Msa0011490 AT5G45950.1 26.441 295 181 12 324 603 17 290 8.30e-15 77.4
Msa0011490 AT5G45950.1 23.256 344 182 13 589 876 29 346 2.34e-13 73.2
Msa0011490 AT1G28570.3 27.225 191 93 5 171 323 11 193 9.85e-15 75.1
Msa0011490 AT5G22810.1 25.581 344 165 13 599 877 33 350 1.09e-14 77.0
Msa0011490 AT5G22810.1 28.458 253 154 10 348 587 33 271 5.22e-14 75.1
Msa0011490 AT1G75900.1 24.176 364 213 11 6 330 17 356 1.40e-14 77.0
Msa0011490 AT1G75900.1 26.482 253 157 10 348 588 42 277 7.96e-14 74.7
Msa0011490 AT5G18430.1 27.089 347 159 12 600 880 28 346 1.93e-14 76.6
Msa0011490 AT5G45960.1 28.112 249 158 10 349 587 47 284 2.00e-14 76.6
Msa0011490 AT5G45960.1 28.505 214 131 11 600 803 47 248 9.78e-11 65.1
Msa0011490 AT5G42170.1 26.347 334 177 16 595 877 45 360 2.78e-14 75.9
Msa0011490 AT5G33370.1 26.648 349 158 13 600 881 30 347 3.46e-14 75.9
Msa0011490 AT5G33370.1 27.969 261 141 12 349 587 30 265 1.75e-11 67.4
Msa0011490 AT1G53990.1 26.765 340 164 12 600 880 35 348 3.56e-14 75.9
Msa0011490 AT5G03980.1 26.570 207 102 6 171 337 127 323 4.45e-14 74.7
Msa0011490 AT5G03980.1 31.818 110 72 1 488 594 127 236 2.64e-11 66.2
Msa0011490 AT1G20130.1 28.137 263 160 12 348 594 203 452 6.24e-14 75.9
Msa0011490 AT1G20130.1 25.806 341 172 14 595 873 199 520 1.61e-12 71.6
Msa0011490 AT1G20130.2 28.137 263 160 12 348 594 183 432 6.78e-14 75.9
Msa0011490 AT1G20130.2 25.806 341 172 14 595 873 179 500 1.39e-12 71.6
Msa0011490 AT3G53100.1 28.958 259 153 10 348 591 28 270 6.87e-14 74.7
Msa0011490 AT3G53100.1 25.294 340 168 14 599 877 28 342 3.47e-13 72.4
Msa0011490 AT1G73610.1 29.767 215 126 8 595 797 30 231 8.84e-14 74.3
Msa0011490 AT1G73610.1 28.462 260 151 11 349 594 35 273 1.04e-12 70.9
Msa0011490 AT1G33811.1 24.924 329 180 12 599 873 33 348 1.78e-13 73.6
Msa0011490 AT1G20132.1 24.460 278 180 9 348 612 60 320 1.79e-13 73.6
Msa0011490 AT1G58430.1 27.068 266 157 10 348 595 34 280 3.60e-13 72.4
Msa0011490 AT1G58430.1 26.991 226 136 8 598 808 33 244 9.81e-11 65.1
Msa0011490 AT2G24560.2 27.881 269 151 13 348 595 33 279 4.18e-13 71.6
Msa0011490 AT2G24560.2 29.600 250 127 13 589 808 13 243 3.08e-11 66.2
Msa0011490 AT1G75890.3 26.537 309 195 13 302 594 26 318 4.21e-13 72.8
Msa0011490 AT4G16230.1 29.389 262 146 13 329 568 3 247 4.64e-13 70.5
Msa0011490 AT2G24560.1 27.985 268 152 12 348 595 33 279 5.79e-13 72.0
Msa0011490 AT2G24560.1 29.600 250 127 13 589 808 13 243 4.02e-11 66.2
Msa0011490 AT4G28780.1 26.513 347 161 12 600 881 31 348 6.76e-13 71.6
Msa0011490 AT4G28780.1 28.571 294 168 13 328 597 5 280 1.40e-11 67.8
Msa0011490 AT2G30220.1 26.894 264 158 11 348 594 32 277 8.81e-13 71.2
Msa0011490 AT2G30220.1 25.460 326 177 13 598 871 31 342 1.95e-11 67.0
Msa0011490 AT5G41890.1 27.928 222 125 10 381 587 69 270 9.71e-13 71.2
Msa0011490 AT1G75930.1 28.000 225 138 7 590 803 19 230 9.95e-13 70.9
Msa0011490 AT1G75890.2 26.846 298 186 13 313 594 8 289 1.89e-12 70.5
Msa0011490 AT5G03600.1 27.530 247 135 9 348 583 13 226 1.97e-12 69.7
Msa0011490 AT3G43550.1 26.119 268 174 8 329 587 10 262 1.98e-12 69.3
Msa0011490 AT3G43550.1 27.700 213 131 7 595 798 25 223 1.43e-11 66.6
Msa0011490 AT1G58520.3 28.516 256 159 10 339 587 24 262 2.33e-12 69.7
Msa0011490 AT1G58520.3 24.850 334 175 12 595 877 25 333 5.17e-11 65.9
Msa0011490 AT1G58525.1 28.516 256 159 10 339 587 24 262 2.33e-12 69.7
Msa0011490 AT1G58525.1 24.850 334 175 12 595 877 25 333 5.17e-11 65.9
Msa0011490 AT5G03610.1 26.860 242 147 8 350 586 44 260 2.43e-12 70.1
Msa0011490 AT5G03610.1 24.545 330 165 12 601 874 44 345 1.26e-11 67.8
Msa0011490 AT2G30310.1 27.046 281 163 12 325 588 17 272 2.96e-12 69.7
Msa0011490 AT2G30310.1 26.235 324 173 13 598 869 32 341 5.13e-12 68.9
Msa0011490 AT2G19010.1 24.436 266 170 8 340 594 19 264 2.98e-12 69.7
Msa0011490 AT2G19010.1 27.273 220 134 6 590 800 20 222 5.17e-12 68.9
Msa0011490 AT5G03600.2 27.530 247 135 9 348 583 48 261 3.00e-12 69.7
Msa0011490 AT5G33370.2 31.111 225 111 10 600 802 30 232 3.27e-12 69.3
Msa0011490 AT5G33370.2 27.969 261 141 12 349 587 30 265 1.97e-11 67.0
Msa0011490 AT2G19050.2 28.037 214 126 7 599 802 30 225 4.35e-12 68.2
Msa0011490 AT2G19050.2 25.292 257 163 6 347 594 29 265 8.22e-12 67.4
Msa0011490 AT2G19050.1 28.037 214 126 7 599 802 30 225 4.55e-12 68.9
Msa0011490 AT2G19050.1 25.391 256 162 6 348 594 30 265 1.17e-11 67.8
Msa0011490 AT5G37690.1 26.071 280 167 9 381 640 64 323 5.06e-12 68.9
Msa0011490 AT5G03810.1 22.327 318 153 12 624 877 57 344 5.27e-12 68.9
Msa0011490 AT5G03810.1 25.581 258 155 10 348 588 29 266 2.14e-11 67.0
Msa0011490 AT2G19010.2 24.436 266 170 8 340 594 49 294 7.46e-12 68.6
Msa0011490 AT2G19010.2 27.273 220 134 6 590 800 50 252 9.41e-12 68.2
Msa0011490 AT1G29670.1 24.458 323 182 12 599 873 31 339 8.03e-12 68.6
Msa0011490 AT2G19060.1 24.425 348 167 12 599 885 29 341 8.39e-12 68.2
Msa0011490 AT1G20135.1 25.625 320 176 13 598 874 27 327 9.99e-12 67.8
Msa0011490 AT1G23500.1 27.481 262 152 11 349 594 35 274 1.15e-11 67.8
Msa0011490 AT1G23500.1 31.401 207 120 11 600 797 35 228 1.16e-11 67.8
Msa0011490 AT1G75910.1 27.928 222 127 9 593 798 21 225 1.36e-11 67.4
Msa0011490 AT5G15720.3 25.110 227 135 7 375 588 33 237 1.42e-11 67.4
Msa0011490 AT1G59406.1 27.700 213 131 7 595 798 25 223 1.45e-11 67.4
Msa0011490 AT1G59406.1 26.104 249 160 8 348 587 29 262 2.98e-11 66.6
Msa0011490 AT1G59030.1 27.700 213 131 7 595 798 25 223 1.45e-11 67.4
Msa0011490 AT1G59030.1 26.104 249 160 8 348 587 29 262 2.98e-11 66.6
Msa0011490 AT1G58725.1 27.700 213 131 7 595 798 25 223 1.45e-11 67.4
Msa0011490 AT1G58725.1 26.104 249 160 8 348 587 29 262 2.98e-11 66.6
Msa0011490 AT1G20120.1 27.586 261 157 11 348 594 77 319 1.60e-11 67.8
Msa0011490 AT3G09930.2 25.620 242 151 8 350 586 40 257 2.12e-11 67.0
Msa0011490 AT3G09930.2 27.094 203 125 7 601 799 40 223 6.72e-11 65.5
Msa0011490 AT3G09930.1 25.620 242 151 8 350 586 40 257 2.12e-11 67.0
Msa0011490 AT3G09930.1 27.094 203 125 7 601 799 40 223 6.72e-11 65.5
Msa0011490 AT1G54030.2 29.213 178 99 5 624 799 80 232 2.14e-11 66.6
Msa0011490 AT1G54000.1 26.522 230 140 9 588 811 24 230 2.19e-11 67.4
Msa0011490 AT1G29670.2 24.458 323 182 12 599 873 99 407 2.40e-11 67.4
Msa0011490 AT1G75890.1 26.688 311 183 12 313 594 8 302 2.48e-11 67.0
Msa0011490 AT1G29660.1 27.830 212 133 7 599 801 31 231 2.93e-11 66.6
Msa0011490 AT1G54010.1 26.201 229 142 7 588 811 24 230 4.79e-11 66.2
Msa0011490 AT1G71250.1 23.782 349 176 13 599 886 40 359 5.71e-11 65.9

Find 185 sgRNAs with CRISPR-Local

Find 1373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTACCATTTATGTTTA+TGG 0.138517 1_1:-17355311 None:intergenic
TGGATGTGTACCTTTAATTT+TGG 0.167825 1_1:+17354843 Msa0011490:CDS
TATAAAATTCTTTACTATAT+CGG 0.215235 1_1:-17354585 None:intergenic
ACCAATATCAAATGTGTATA+AGG 0.220968 1_1:-17354498 None:intergenic
TGGTTGTCTTCCTTTAATTT+TGG 0.224979 1_1:+17344880 Msa0011490:CDS
CTTAGAGAAATACTCTTCTT+TGG 0.227215 1_1:-17334345 None:intergenic
AACCATCTACTAGAATAATA+TGG 0.227325 1_1:+17355356 Msa0011490:CDS
ATTTAGGGGCAAGGTCATTT+TGG 0.232450 1_1:+17354800 Msa0011490:CDS
AGCGCATATCTTGATTCTTT+GGG 0.238639 1_1:+17334032 Msa0011490:CDS
TGTCTAATGAATTGTGTTCT+AGG 0.252829 1_1:-17334188 None:intergenic
TACTGAATTCGAAGGTAAAA+TGG 0.253355 1_1:-17344337 None:intergenic
TTTGGAATAATAATCTTCTT+TGG 0.255011 1_1:-17354474 None:intergenic
GTTTAGGGGCAAGATCATTT+TGG 0.257323 1_1:+17344837 Msa0011490:CDS
AAGCGCATATCTTGATTCTT+TGG 0.258296 1_1:+17334031 Msa0011490:CDS
ATCTAGAACATATACAATTT+AGG 0.266079 1_1:+17354784 Msa0011490:intron
TACTGAACCTGAAGGGAAAA+TGG 0.271054 1_1:-17354254 None:intergenic
GTAATTTCAGCTCAAAGTTT+TGG 0.272793 1_1:+17333996 Msa0011490:intron
TATGAAATTGTTTACTATAT+CGG 0.277750 1_1:-17344665 None:intergenic
GGAAAATTGGCCAAAATTAA+AGG 0.278464 1_1:-17354853 None:intergenic
CTTTATAGCAGATGGAAAAT+TGG 0.280511 1_1:-17354866 None:intergenic
TTGGAATAATAATCTTCTTT+GGG 0.286703 1_1:-17354473 None:intergenic
TTCCCTGCAATCTTCAACTT+TGG 0.286725 1_1:+17332704 Msa0011490:CDS
CCATTAGGTATAATACTATT+AGG 0.288473 1_1:-17344304 None:intergenic
TCCCATATTATTCTAGTAGA+TGG 0.294746 1_1:-17355358 None:intergenic
CGAATCATTCTTGATTTCAT+AGG 0.296923 1_1:+17342030 Msa0011490:CDS
CGAATCATTCTTGATTTCAT+AGG 0.296923 1_1:+17350104 Msa0011490:CDS
TACCTAAAACAAGGTTCATT+AGG 0.300155 1_1:+17354297 Msa0011490:CDS
ATCCTCCCATTCCACTAAAT+AGG 0.303807 1_1:+17355449 Msa0011490:CDS
GCCTTATACACATTTGATAT+TGG 0.309552 1_1:+17354497 Msa0011490:CDS
TTGAGTACCATTGACCTCTA+TGG 0.311057 1_1:-17335605 None:intergenic
AGTCCATATCTTGATTCTCT+TGG 0.320911 1_1:+17354140 Msa0011490:CDS
ATCAAGATATGGACTTAGAT+AGG 0.323465 1_1:-17354132 None:intergenic
GCCTTGTACACATTTGATAT+TGG 0.328637 1_1:+17344577 Msa0011490:CDS
TCTAGAACATATACAATTTA+GGG 0.329938 1_1:+17354785 Msa0011490:intron
CTGTAACATGCCCTATTTAG+TGG 0.330204 1_1:-17355460 None:intergenic
TACCCAGAACAAAATTCATT+AGG 0.331629 1_1:+17344380 Msa0011490:CDS
CAAAGAAGAGTATTTCTCTA+AGG 0.333292 1_1:+17334346 Msa0011490:CDS
GGAGCAACCATAAACATAAA+TGG 0.333844 1_1:+17355304 Msa0011490:CDS
GGAAAATTAGCCAAAATTAA+AGG 0.342640 1_1:-17344890 None:intergenic
GCTTTGTACACATTTGATAT+TGG 0.345019 1_1:+17334368 Msa0011490:CDS
TTAGAGAAATACTCTTCTTT+GGG 0.346247 1_1:-17334344 None:intergenic
ACTTATTTCTACAGACCTAA+TGG 0.349302 1_1:+17332794 Msa0011490:CDS
GTCTTTGATCAAATCTCTAC+TGG 0.362400 1_1:+17355415 Msa0011490:CDS
GACCATCTGCAAGAGTGAAT+TGG 0.365145 1_1:+17335650 Msa0011490:CDS
TTAGCTGAAAAGGATGAAAA+TGG 0.366007 1_1:+17335219 Msa0011490:intron
ATCAAATGTGTACAAGGCTT+TGG 0.369552 1_1:-17344572 None:intergenic
ATCAAATGTGTATAAGGCTT+TGG 0.373582 1_1:-17354492 None:intergenic
CGTCTAATTGTCGATTTCAT+TGG 0.373711 1_1:+17332833 Msa0011490:CDS
CCTAATAGTATTATACCTAA+TGG 0.374083 1_1:+17344304 Msa0011490:CDS
ATAAAATTCTTTACTATATC+GGG 0.374442 1_1:-17354584 None:intergenic
ATGAAATTGTTTACTATATC+GGG 0.376114 1_1:-17344664 None:intergenic
GGTGCTTCCAACGCTGATAC+TGG 0.376187 1_1:+17341922 Msa0011490:CDS
TCTAGAACATACACAGTTTA+GGG 0.384734 1_1:+17344822 Msa0011490:intron
TCACCAAAGTTGAAGATTGC+AGG 0.385266 1_1:-17332707 None:intergenic
CTTATTTCTACAGACCTAAT+GGG 0.385727 1_1:+17332795 Msa0011490:CDS
CTAGTTGTTTGTTGTGGCTA+TGG 0.388133 1_1:+17335541 Msa0011490:CDS
ATCTAGAACATACACAGTTT+AGG 0.388751 1_1:+17344821 Msa0011490:intron
GGAAGCACCAAAGTTAAATA+TGG 0.391351 1_1:-17341908 None:intergenic
TCCTCCCATTCCACTAAATA+GGG 0.392622 1_1:+17355450 Msa0011490:CDS
AAACTCTGATACTGGTGGTT+TGG 0.401156 1_1:+17350004 Msa0011490:CDS
ACCTAAAACAAGGTTCATTA+GGG 0.406556 1_1:+17354298 Msa0011490:CDS
AGTTGGGTCCTAGAGAATTA+AGG 0.407484 1_1:-17344234 None:intergenic
GAGAAACTATTGATTATCTC+TGG 0.411103 1_1:-17334455 None:intergenic
GTAATTTCAGCACAGAGCTT+TGG 0.415339 1_1:+17344190 Msa0011490:intron
CGAGCACTGCCGTTACCATA+TGG 0.418623 1_1:+17350038 Msa0011490:CDS
ATTAAGGTATGGACTAAGAA+AGG 0.419317 1_1:-17344218 None:intergenic
ATACATAACACTGGACCAAT+TGG 0.419424 1_1:+17354823 Msa0011490:CDS
AATCTCTGAATTGAGTGTAT+TGG 0.422061 1_1:-17334160 None:intergenic
GTCCATATCTTGATTCTCTT+GGG 0.422681 1_1:+17354141 Msa0011490:CDS
CCATCAGAGTACCTCCCATT+AGG 0.423139 1_1:-17332809 None:intergenic
ACCCAGAACAAAATTCATTA+GGG 0.424084 1_1:+17344381 Msa0011490:CDS
CAACGCTGATACTGGTGGTT+TGG 0.424467 1_1:+17341930 Msa0011490:CDS
GATATTGGTCAAAATGATCT+TGG 0.426312 1_1:+17334383 Msa0011490:CDS
ACCATCTGCAAGAGTGAATT+GGG 0.426866 1_1:+17335651 Msa0011490:CDS
ACAAAATTCATTAGGGATCA+AGG 0.431338 1_1:+17344388 Msa0011490:CDS
ATTGGTCAAAATGATCTTAC+TGG 0.435537 1_1:+17344595 Msa0011490:CDS
ACCATCTACTAGAATAATAT+GGG 0.442115 1_1:+17355357 Msa0011490:CDS
CAATTTCATAGTGAATATAA+AGG 0.449137 1_1:+17344678 Msa0011490:CDS
AATGGACTGAACATTCCATT+AGG 0.460673 1_1:-17344319 None:intergenic
TCAAGATATGCGCTTAGATA+AGG 0.460946 1_1:-17334023 None:intergenic
CCACCCTGAGGTATAATACT+TGG 0.463941 1_1:-17334113 None:intergenic
GGTCAAAATGATCTTACTGC+TGG 0.466959 1_1:+17354518 Msa0011490:CDS
TAGAAATAAGTCTCTCCATA+TGG 0.467782 1_1:-17332782 None:intergenic
ACAAGGTTCATTAGGGATCA+AGG 0.468253 1_1:+17354305 Msa0011490:CDS
TAACTATCCTTTATTGCAGA+TGG 0.470249 1_1:-17344911 None:intergenic
CATGCCCTATTTAGTGGAAT+GGG 0.472312 1_1:-17355454 None:intergenic
TGTCCTGCCATATTTAACTT+TGG 0.472496 1_1:+17341901 Msa0011490:CDS
AAACTCAGACACTGGTGGCT+TGG 0.473491 1_1:+17332733 Msa0011490:CDS
CCCACCAAGTATTATACCTC+AGG 0.473762 1_1:+17334109 Msa0011490:CDS
CATAGCCACAACAAACAACT+AGG 0.473839 1_1:-17335540 None:intergenic
ATTAAAGGTACACATCCAAT+TGG 0.476146 1_1:-17354838 None:intergenic
CAAGATATGCGCTTAGATAA+GGG 0.482225 1_1:-17334022 None:intergenic
GTCTCTCCATATGGTGGCGT+TGG 0.483501 1_1:-17332773 None:intergenic
GGTGCTTCAAACTCTGATAC+TGG 0.485062 1_1:+17349996 Msa0011490:CDS
ACATGCCCTATTTAGTGGAA+TGG 0.489175 1_1:-17355455 None:intergenic
TTAAGGTATGGACTAAGAAA+GGG 0.492629 1_1:-17344217 None:intergenic
ACCAATATCAAATGTGTACA+AGG 0.494344 1_1:-17344578 None:intergenic
GATCACTACGAAGTTGAGCT+AGG 0.499736 1_1:-17344994 None:intergenic
AATGGTACAAACACTGTTGT+GGG 0.499739 1_1:+17355322 Msa0011490:CDS
CAAGCACTTCAGTTGCCAAA+CGG 0.500312 1_1:+17341964 Msa0011490:CDS
TACAACTATAACATTAGTGC+TGG 0.500660 1_1:+17355277 Msa0011490:CDS
CTAGGTATGATATTACTAGT+AGG 0.500699 1_1:-17354218 None:intergenic
CCCTGAGGTATAATACTTGG+TGG 0.502189 1_1:-17334110 None:intergenic
GTTTGCACCATGTGTGAAGT+TGG 0.502301 1_1:-17344251 None:intergenic
GGTGCAAACTTTGCAACAGC+AGG 0.502492 1_1:+17354179 Msa0011490:CDS
TAACTATCCTTTATAGCAGA+TGG 0.504462 1_1:-17354874 None:intergenic
ATTAAAGGAAGACAACCAAT+TGG 0.505303 1_1:-17344875 None:intergenic
ATACACAACACAGGGCCAAT+TGG 0.506817 1_1:+17344860 Msa0011490:CDS
CTAGTGGCTTGTTGTGGCAA+TGG 0.508528 1_1:+17355247 Msa0011490:CDS
ACATATGTGATTGCAGCTAA+AGG 0.510042 1_1:-17335324 None:intergenic
AGTCCATACCTTAATTCTCT+AGG 0.511863 1_1:+17344226 Msa0011490:CDS
GGTCAAAATGATCTTGGTGC+TGG 0.513823 1_1:+17334389 Msa0011490:CDS
CAAGCACCAACGCCACCATA+TGG 0.515260 1_1:+17332767 Msa0011490:CDS
GACCCAAGAGAATCAAGATA+TGG 0.518864 1_1:-17354143 None:intergenic
AAATGGTACAAACACTGTTG+TGG 0.519598 1_1:+17355321 Msa0011490:CDS
TGGCAACTGAAGTGCTTGAA+AGG 0.522850 1_1:-17341959 None:intergenic
TATAATTATAGCAATAGTGT+TGG 0.527004 1_1:+17335571 Msa0011490:CDS
CATCCCCTAGTTGTTTGTTG+TGG 0.531642 1_1:+17335535 Msa0011490:CDS
ATGGTGGCGTTGGTGCTTGA+AGG 0.535800 1_1:-17332763 None:intergenic
TCTGCTATAAAGGATAGTTA+TGG 0.535982 1_1:+17354877 Msa0011490:CDS
TCTGCAATAAAGGATAGTTA+TGG 0.538464 1_1:+17344914 Msa0011490:CDS
ATATTTCAATCATAAGTTGA+AGG 0.539994 1_1:+17335272 Msa0011490:CDS
TATAACATTAGTGCTGGCTG+TGG 0.541420 1_1:+17355283 Msa0011490:CDS
TGGTAACGGCAGTGCTCGAA+AGG 0.543397 1_1:-17350033 None:intergenic
TATTGGACATCAAGGTAGAA+AGG 0.543537 1_1:-17334143 None:intergenic
TCAAGATATGGACTTAGATA+GGG 0.548964 1_1:-17354131 None:intergenic
GCACCAAAGTTAAATATGGC+AGG 0.552362 1_1:-17341904 None:intergenic
TATAGCAATAGTGTTGGATG+TGG 0.553912 1_1:+17335577 Msa0011490:CDS
TGGAATAATAATCTTCTTTG+GGG 0.555591 1_1:-17354472 None:intergenic
AGCAATAGTGTTGGATGTGG+AGG 0.556583 1_1:+17335580 Msa0011490:CDS
CTTGGGTCAAACTTCACACA+TGG 0.560034 1_1:+17354158 Msa0011490:CDS
TCCCAATTCACTCTTGCAGA+TGG 0.561326 1_1:-17335652 None:intergenic
GGTGACTCAAACTCAGACAC+TGG 0.562687 1_1:+17332725 Msa0011490:CDS
GCGCATATCTTGATTCTTTG+GGG 0.564900 1_1:+17334033 Msa0011490:CDS
TTTGCACCATGTGTGAAGTT+GGG 0.570438 1_1:-17344250 None:intergenic
ATAGCCACAACAAACAACTA+GGG 0.571894 1_1:-17335539 None:intergenic
GGTCCTAGAGAATTAAGGTA+TGG 0.572360 1_1:-17344229 None:intergenic
GTTGTTTGTTGTGGCTATGG+AGG 0.573272 1_1:+17335544 Msa0011490:CDS
CCTGAGGTATAATACTTGGT+GGG 0.574366 1_1:-17334109 None:intergenic
CACCAAAGTTGAAGATTGCA+GGG 0.576163 1_1:-17332706 None:intergenic
ATTGAGTGTATTGGACATCA+AGG 0.579239 1_1:-17334151 None:intergenic
ACATATACAATTTAGGGGCA+AGG 0.581070 1_1:+17354791 Msa0011490:CDS
AGGGTTTGAACTTCCACTAG+TGG 0.582113 1_1:+17355231 Msa0011490:intron
CTTCCACTAGTGGCTTGTTG+TGG 0.588534 1_1:+17355241 Msa0011490:CDS
GGTCAAAATGATCTTACTGG+TGG 0.589104 1_1:+17344598 Msa0011490:CDS
ATCACTACGAAGTTGAGCTA+GGG 0.596819 1_1:-17344993 None:intergenic
ACATATGCGATTGCAGCAAG+AGG 0.597236 1_1:-17345019 None:intergenic
CTGAGGTATAATACTTGGTG+GGG 0.599428 1_1:-17334108 None:intergenic
AAAGTCTCACCATATGGTAA+CGG 0.600481 1_1:-17350047 None:intergenic
ATTGAATGTACTGAATTCGA+AGG 0.601719 1_1:-17344345 None:intergenic
TTGCCACAACAAGCCACTAG+TGG 0.603337 1_1:-17355244 None:intergenic
TCTGCAAGAGTGAATTGGGA+TGG 0.604576 1_1:+17335655 Msa0011490:CDS
CAATGAAATCGACAATTAGA+CGG 0.606252 1_1:-17332832 None:intergenic
GGAGGAACCATAGAGGTCAA+TGG 0.609556 1_1:+17335598 Msa0011490:CDS
CTAGGACCCAACTTCACACA+TGG 0.611994 1_1:+17344244 Msa0011490:CDS
AAGATTTCATACCTAAAACA+AGG 0.612054 1_1:+17354288 Msa0011490:CDS
TGGTGGCGTTGGTGCTTGAA+GGG 0.619536 1_1:-17332762 None:intergenic
GCCCTATTTAGTGGAATGGG+AGG 0.622277 1_1:-17355451 None:intergenic
AGCACAATCAAAGACACAAG+TGG 0.622514 1_1:-17341832 None:intergenic
GTGCAAACTTTGCAACAGCA+GGG 0.631688 1_1:+17354180 Msa0011490:CDS
TCTACTAGAATAATATGGGA+TGG 0.641361 1_1:+17355361 Msa0011490:CDS
TGAGGTATAATACTTGGTGG+GGG 0.644183 1_1:-17334107 None:intergenic
CCACCAAGTATTATACCTCA+GGG 0.644707 1_1:+17334110 Msa0011490:CDS
GCTTCAAACTCTGATACTGG+TGG 0.645496 1_1:+17349999 Msa0011490:CDS
GCTTCCAACGCTGATACTGG+TGG 0.647142 1_1:+17341925 Msa0011490:CDS
CCTAATGGGAGGTACTCTGA+TGG 0.649182 1_1:+17332809 Msa0011490:CDS
CAAACCACCAGTATCAGCGT+TGG 0.650028 1_1:-17341929 None:intergenic
ACTAGTAATATCATACCTAG+TGG 0.650422 1_1:+17354221 Msa0011490:CDS
AAATAAGTCTCTCCATATGG+TGG 0.654756 1_1:-17332779 None:intergenic
GACTCAAACTCAGACACTGG+TGG 0.655403 1_1:+17332728 Msa0011490:CDS
CAACTGAAGTGCTTGAAAGG+CGG 0.655867 1_1:-17341956 None:intergenic
AATGGACTAAACATTCCACT+AGG 0.660611 1_1:-17354236 None:intergenic
TTGAATGTACTGAACCTGAA+GGG 0.661770 1_1:-17354261 None:intergenic
GTGGCTTGTTGTGGCAATGG+AGG 0.663762 1_1:+17355250 Msa0011490:CDS
ATTGAATGTACTGAACCTGA+AGG 0.669376 1_1:-17354262 None:intergenic
ACACAATTCATTAGACAACA+AGG 0.676208 1_1:+17334194 Msa0011490:CDS
TAGCCACAACAAACAACTAG+GGG 0.679936 1_1:-17335538 None:intergenic
ATTTCTACAGACCTAATGGG+AGG 0.681218 1_1:+17332798 Msa0011490:CDS
CTAGAACATACACAGTTTAG+GGG 0.691483 1_1:+17344823 Msa0011490:intron
CTAGAACATATACAATTTAG+GGG 0.696032 1_1:+17354786 Msa0011490:intron
CCAAGTATTATACCTCAGGG+TGG 0.716473 1_1:+17334113 Msa0011490:CDS
TGGATGTGGAGGAACCATAG+AGG 0.718015 1_1:+17335591 Msa0011490:CDS
ATTGCTACTTTCAATCACTG+TGG 0.728286 1_1:-17332669 None:intergenic
AAAGGACTGAATCCACCCTG+AGG 0.781699 1_1:-17334125 None:intergenic
GGATGGTACTCATTACACAG+AGG 0.801423 1_1:+17355378 Msa0011490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAATTAAAAATAATA+AGG - chr1_1:17352092-17352111 None:intergenic 0.0%
!!! GTCTAATTTTTTTTTTTTTT+TGG + chr1_1:17332981-17333000 Msa0011490:intron 10.0%
!! AAAAAATTAATTATGCAAAA+TGG + chr1_1:17333315-17333334 Msa0011490:intron 10.0%
!! GTAAAAAAAAAAAAAATTGA+CGG + chr1_1:17333723-17333742 Msa0011490:intron 10.0%
!! TAAAAAAAAAAAAAATTGAC+GGG + chr1_1:17333724-17333743 Msa0011490:intron 10.0%
!! AAATAGTTAAATATTTAGAA+AGG - chr1_1:17334506-17334525 None:intergenic 10.0%
!! AGATTAATAAATTAAGAAAT+GGG - chr1_1:17335088-17335107 None:intergenic 10.0%
!!! AGAAAAAAAAATGTAATTTT+TGG + chr1_1:17336413-17336432 Msa0011490:intron 10.0%
!!! TGTTTTTGTATTTTTATTTT+GGG - chr1_1:17336538-17336557 None:intergenic 10.0%
!! AATATTGAACAATTTAATAT+TGG + chr1_1:17337391-17337410 Msa0011490:intron 10.0%
!!! TTTCATAATTTTTTTTAGTA+TGG + chr1_1:17337984-17338003 Msa0011490:intron 10.0%
!!! TTAAACTTTTTTTTAGTTTT+AGG - chr1_1:17338383-17338402 None:intergenic 10.0%
!! AATAATATATTAAATGACTA+AGG + chr1_1:17339726-17339745 Msa0011490:intron 10.0%
!!! AAATATAATTAATTTTGTGT+GGG - chr1_1:17341344-17341363 None:intergenic 10.0%
!!! AATCTTTTTTACTTATAATT+TGG + chr1_1:17341436-17341455 Msa0011490:intron 10.0%
!!! ATCTTTTTTACTTATAATTT+GGG + chr1_1:17341437-17341456 Msa0011490:intron 10.0%
!!! AGTTTTTTTTACTTATAATT+TGG + chr1_1:17341472-17341491 Msa0011490:intron 10.0%
!! TAAAAATATTAATTATGTCT+TGG - chr1_1:17341545-17341564 None:intergenic 10.0%
!!! GTTTAATTATTATTTTTTGT+TGG - chr1_1:17341603-17341622 None:intergenic 10.0%
!! ATAACAAAATATATTGAATT+TGG - chr1_1:17342494-17342513 None:intergenic 10.0%
!!! CTTGATTTTTTTAATTAAAT+TGG + chr1_1:17343572-17343591 Msa0011490:intron 10.0%
!! AATTTCATTTCTAATTAAAT+TGG + chr1_1:17343642-17343661 Msa0011490:intron 10.0%
!! ATTTCATTTCTAATTAAATT+GGG + chr1_1:17343643-17343662 Msa0011490:intron 10.0%
!! AAAAATTAAGAAGAAAAAAA+AGG - chr1_1:17344495-17344514 None:intergenic 10.0%
!!! TTCTTAATTTTTCAAATATA+TGG + chr1_1:17344503-17344522 Msa0011490:intron 10.0%
!!! ATATTTTAATTTAAAGTTGA+AGG + chr1_1:17344967-17344986 Msa0011490:CDS 10.0%
!!! AGTTTTCTATATTAATAATA+AGG + chr1_1:17345584-17345603 Msa0011490:intron 10.0%
!!! TTATTTTATAATTGATGATA+GGG - chr1_1:17345614-17345633 None:intergenic 10.0%
!!! TTTATTTTATAATTGATGAT+AGG - chr1_1:17345615-17345634 None:intergenic 10.0%
!!! AAATTTTTAAAATGAAAGAA+TGG - chr1_1:17346533-17346552 None:intergenic 10.0%
!!! ATTCTTTCATTTTAAAAATT+TGG + chr1_1:17346532-17346551 Msa0011490:intron 10.0%
!!! TAATATTTATATTTTTCACA+AGG + chr1_1:17346639-17346658 Msa0011490:intron 10.0%
!!! TCATATTTTTTTATCTATTT+AGG + chr1_1:17348240-17348259 Msa0011490:intron 10.0%
!! TAAATTAAAATTAAAGTTGA+TGG + chr1_1:17348857-17348876 Msa0011490:intron 10.0%
!!! GTATTTTCTATTTTTTATAA+AGG + chr1_1:17348991-17349010 Msa0011490:intron 10.0%
!!! ATTATTATTTTTGTATAGTT+TGG - chr1_1:17349418-17349437 None:intergenic 10.0%
!!! ATTATTATTTTTGTATAGTT+TGG - chr1_1:17349418-17349437 None:intergenic 10.0%
!! TAAATAAGATTAAAATCTAA+GGG - chr1_1:17349586-17349605 None:intergenic 10.0%
!! ATAAATAAGATTAAAATCTA+AGG - chr1_1:17349587-17349606 None:intergenic 10.0%
!!! GTTATTTGTATTTAAAATTA+AGG - chr1_1:17351401-17351420 None:intergenic 10.0%
!!! TTACACTTTTTAAATAATAA+AGG - chr1_1:17351510-17351529 None:intergenic 10.0%
!!! GTATTTTTTTTATGAAATTT+TGG - chr1_1:17351670-17351689 None:intergenic 10.0%
!!! TATAAGAGTATTAATTAATT+CGG + chr1_1:17352024-17352043 Msa0011490:intron 10.0%
!! TTTAATAAATGGTTTAAAAA+TGG + chr1_1:17352064-17352083 Msa0011490:intron 10.0%
!! ATTAATAAATAAGGATAATA+TGG - chr1_1:17352435-17352454 None:intergenic 10.0%
!! CCTAATAAAATTAATAAATA+AGG - chr1_1:17353363-17353382 None:intergenic 10.0%
!!! CCTTATTTATTAATTTTATT+AGG + chr1_1:17352441-17352460 Msa0011490:intron 10.0%
!! TAATTTAAAGGAAAATTATT+AGG + chr1_1:17353307-17353326 Msa0011490:intron 10.0%
!!! TTAGGTTTATTAATTTTATT+AGG - chr1_1:17353348-17353367 None:intergenic 10.0%
!!! CCTTATTTATTAATTTTATT+AGG - chr1_1:17352441-17352460 None:intergenic 10.0%
!! CCTAATAAAATTAATAAATA+AGG + chr1_1:17353363-17353382 Msa0011490:intron 10.0%
!! TTAAAATGAATTTAAATATG+AGG - chr1_1:17353850-17353869 None:intergenic 10.0%
!!! AATTATTTCTATATTTATGA+AGG + chr1_1:17354060-17354079 Msa0011490:intron 10.0%
!!! ATTATTTCTATATTTATGAA+GGG + chr1_1:17354061-17354080 Msa0011490:intron 10.0%
!! TATAAAATTCTTTACTATAT+CGG - chr1_1:17354588-17354607 None:intergenic 10.0%
!! TAGTAATATATATATAACAA+GGG - chr1_1:17354746-17354765 None:intergenic 10.0%
!! TTAGTAATATATATATAACA+AGG - chr1_1:17354747-17354766 None:intergenic 10.0%
!! ATATAAAACCTTACTATTTA+AGG - chr1_1:17333115-17333134 None:intergenic 15.0%
!!! ATAGTAAGGTTTTATATAAA+TGG + chr1_1:17333118-17333137 Msa0011490:intron 15.0%
!! TGTTTAAAAAATTGAACTAA+TGG + chr1_1:17333596-17333615 Msa0011490:intron 15.0%
!! TGAAATTACAAATCATAAAT+TGG - chr1_1:17333985-17334004 None:intergenic 15.0%
!!! TAATATTCACACATTTTTTT+AGG + chr1_1:17334240-17334259 Msa0011490:intron 15.0%
!!! TTATTCTTATTTTTCTTTGT+AGG + chr1_1:17334299-17334318 Msa0011490:intron 15.0%
!! GAGATTAATAAATTAAGAAA+TGG - chr1_1:17335089-17335108 None:intergenic 15.0%
!! GAAAATTCACAAAAATATAA+GGG - chr1_1:17335197-17335216 None:intergenic 15.0%
!!! TGAAAAAAATTAACGTTTTT+AGG + chr1_1:17335443-17335462 Msa0011490:intron 15.0%
!!! AAGTGTATATTTTAATAAGA+GGG + chr1_1:17335958-17335977 Msa0011490:intron 15.0%
!! AAAATTAACAGAAAAAAGTT+TGG + chr1_1:17336151-17336170 Msa0011490:intron 15.0%
!!! TCCTTTTAAAAAGAATTAAA+AGG - chr1_1:17336448-17336467 None:intergenic 15.0%
!!! GTGTTTTTGTATTTTTATTT+TGG - chr1_1:17336539-17336558 None:intergenic 15.0%
!!! TATTTTTTAAATTTGATCGT+TGG + chr1_1:17337088-17337107 Msa0011490:intron 15.0%
!!! TTTTATTATCTTGTATCATA+TGG + chr1_1:17337781-17337800 Msa0011490:intron 15.0%
!! TTTATTATCTTGTATCATAT+GGG + chr1_1:17337782-17337801 Msa0011490:intron 15.0%
!! AAGAAAAAAATAAGAAAAGA+TGG + chr1_1:17338401-17338420 Msa0011490:intron 15.0%
!! AGAAAAAAATAAGAAAAGAT+GGG + chr1_1:17338402-17338421 Msa0011490:intron 15.0%
!! TTTAATTCCAACAAATAAAT+AGG + chr1_1:17338668-17338687 Msa0011490:intron 15.0%
!! TTAATTCCAACAAATAAATA+GGG + chr1_1:17338669-17338688 Msa0011490:intron 15.0%
!! AAATACAAATAAAGATTTGA+GGG - chr1_1:17338788-17338807 None:intergenic 15.0%
!! AAAATACAAATAAAGATTTG+AGG - chr1_1:17338789-17338808 None:intergenic 15.0%
!! AATATAATCATATGTATCTT+TGG - chr1_1:17339083-17339102 None:intergenic 15.0%
!!! AATCTAAAGAAGTATTTTAA+AGG + chr1_1:17339458-17339477 Msa0011490:intron 15.0%
!!! AATAAAATGAATGACATTTT+GGG - chr1_1:17340428-17340447 None:intergenic 15.0%
!!! GATGTAAAAACAATTTTTAT+TGG + chr1_1:17341016-17341035 Msa0011490:intron 15.0%
!! TAAATAGTTAATGATACAAT+AGG - chr1_1:17341232-17341251 None:intergenic 15.0%
!!! GAAATATAATTAATTTTGTG+TGG - chr1_1:17341345-17341364 None:intergenic 15.0%
!!! TTTTAATTACTTTTGAAAAG+TGG + chr1_1:17342111-17342130 Msa0011490:intron 15.0%
!!! AACAATTAATTTGAAATAGA+CGG + chr1_1:17342239-17342258 Msa0011490:intron 15.0%
!!! TTCACTTTTTTTTTTTTTGA+AGG - chr1_1:17342919-17342938 None:intergenic 15.0%
!!! CATTATTACTAAGTTTTTTT+GGG - chr1_1:17342979-17342998 None:intergenic 15.0%
!!! ACATTATTACTAAGTTTTTT+TGG - chr1_1:17342980-17342999 None:intergenic 15.0%
!!! GTCAATTTTATCTATATTTA+AGG - chr1_1:17343103-17343122 None:intergenic 15.0%
!!! TTTTTAATTAAATTGGGTTA+AGG + chr1_1:17343579-17343598 Msa0011490:intron 15.0%
!! TATACATCACAATAATATAT+AGG + chr1_1:17344087-17344106 Msa0011490:intron 15.0%
!!! AATAATTGCTATATTTCTAA+AGG + chr1_1:17344137-17344156 Msa0011490:intron 15.0%
!! TGAAATTACAAAATTATACA+TGG - chr1_1:17344179-17344198 None:intergenic 15.0%
!! TATGAAATTGTTTACTATAT+CGG - chr1_1:17344668-17344687 None:intergenic 15.0%
!! TTATAATGTTTATTGAAGAT+GGG - chr1_1:17344752-17344771 None:intergenic 15.0%
!! ATTATAATGTTTATTGAAGA+TGG - chr1_1:17344753-17344772 None:intergenic 15.0%
!! TTTCAAAATCCAAAAAAATA+CGG + chr1_1:17345070-17345089 Msa0011490:intron 15.0%
!! TTATATTGTAAATTTGTAGA+TGG + chr1_1:17345950-17345969 Msa0011490:intron 15.0%
!!! TCATTTTTATCTGATTATTT+TGG - chr1_1:17345999-17346018 None:intergenic 15.0%
!!! AATATGATCTTTTTATTTGT+TGG - chr1_1:17347037-17347056 None:intergenic 15.0%
!!! ATTTAATTTCAAATTCATCA+AGG + chr1_1:17347076-17347095 Msa0011490:intron 15.0%
!!! AATTATATATTTTTGTCCAA+TGG + chr1_1:17347583-17347602 Msa0011490:intron 15.0%
!!! ACTTTTAATAGCATTTTTAA+AGG - chr1_1:17347951-17347970 None:intergenic 15.0%
!! AGATAAAAAAATATGAGTAT+TGG - chr1_1:17348236-17348255 None:intergenic 15.0%
!! ATTTCTTATATACTATACTA+AGG - chr1_1:17348828-17348847 None:intergenic 15.0%
!! AGTATAGTATATAAGAAATT+TGG + chr1_1:17348829-17348848 Msa0011490:intron 15.0%
!!! TTTTTTATCTAATTTTGAAG+TGG + chr1_1:17348911-17348930 Msa0011490:intron 15.0%
!!! TTTTTATCTAATTTTGAAGT+GGG + chr1_1:17348912-17348931 Msa0011490:intron 15.0%
!!! TGTCTATTTATACTTTTTAT+AGG - chr1_1:17348939-17348958 None:intergenic 15.0%
!! CATATAATATCATATGTATT+AGG - chr1_1:17351246-17351265 None:intergenic 15.0%
!! TATATCTATACTATATACAA+AGG + chr1_1:17351323-17351342 Msa0011490:intron 15.0%
!!! TTTAAAATTAAGGGTATTTT+TGG - chr1_1:17351391-17351410 None:intergenic 15.0%
!!! AAATTGTTTAAGAGTATAAT+TGG - chr1_1:17351573-17351592 None:intergenic 15.0%
!! TAATATGGATCTTTAATAAA+TGG + chr1_1:17352053-17352072 Msa0011490:intron 15.0%
!!! TATATTTTTGTTGAGATTTA+AGG - chr1_1:17352278-17352297 None:intergenic 15.0%
!! GATTTCAAACAATAATAATA+TGG + chr1_1:17352857-17352876 Msa0011490:intron 15.0%
!! AAATAAGGATAACAAATAAT+AGG + chr1_1:17353378-17353397 Msa0011490:intron 15.0%
!! AATAAGGATAACAAATAATA+GGG + chr1_1:17353379-17353398 Msa0011490:intron 15.0%
!!! TCAATTGATTTTATCTTTAT+TGG - chr1_1:17353639-17353658 None:intergenic 15.0%
!! AATATTTCATATGAATTTCA+GGG - chr1_1:17353950-17353969 None:intergenic 15.0%
!! TGAAATTAAGAAAGAAAAAA+AGG - chr1_1:17354415-17354434 None:intergenic 15.0%
!! ATAAAATTCTTTACTATATC+GGG - chr1_1:17354587-17354606 None:intergenic 15.0%
!!! ATATTTCAATTTAAAGTTGA+AGG + chr1_1:17354930-17354949 Msa0011490:intron 15.0%
!!! GAAATTTTCATGAGTTTAAT+TGG + chr1_1:17332948-17332967 Msa0011490:intron 20.0%
!!! ATTAATTTTGAAGTTGCATT+CGG + chr1_1:17333016-17333035 Msa0011490:intron 20.0%
!! ATCTCGTTACATAAAAATTA+AGG + chr1_1:17333051-17333070 Msa0011490:intron 20.0%
!! TCTCGTTACATAAAAATTAA+GGG + chr1_1:17333052-17333071 Msa0011490:intron 20.0%
!! TTTAACAACCTTAAATAGTA+AGG + chr1_1:17333104-17333123 Msa0011490:intron 20.0%
!! TTAAAAAATTGAACTAATGG+AGG + chr1_1:17333599-17333618 Msa0011490:intron 20.0%
!! AGTTAGAAAAATATACCATA+AGG - chr1_1:17334620-17334639 None:intergenic 20.0%
!! TATTTCCATACAAAATAAGT+GGG - chr1_1:17334709-17334728 None:intergenic 20.0%
!! TTATTTCCATACAAAATAAG+TGG - chr1_1:17334710-17334729 None:intergenic 20.0%
!! GGAAAATTCACAAAAATATA+AGG - chr1_1:17335198-17335217 None:intergenic 20.0%
!!! ATATTTCAATCATAAGTTGA+AGG + chr1_1:17335272-17335291 Msa0011490:CDS 20.0%
!!! TTTTTTTGGGTTGTTAAAAA+GGG - chr1_1:17335373-17335392 None:intergenic 20.0%
!!! ATTTTTTTGGGTTGTTAAAA+AGG - chr1_1:17335374-17335393 None:intergenic 20.0%
!! TTTAACAACCCAAAAAAATA+TGG + chr1_1:17335375-17335394 Msa0011490:CDS 20.0%
!!! TTGACTTACCATATTTTTTT+GGG - chr1_1:17335386-17335405 None:intergenic 20.0%
!!! TTTGACTTACCATATTTTTT+TGG - chr1_1:17335387-17335406 None:intergenic 20.0%
!! TATAATTATAGCAATAGTGT+TGG + chr1_1:17335571-17335590 Msa0011490:CDS 20.0%
!!! TAAAGCTCAATATATTTTGA+TGG - chr1_1:17335785-17335804 None:intergenic 20.0%
!! CTTATGCAAAAAATATTGTT+GGG - chr1_1:17335929-17335948 None:intergenic 20.0%
!! TCTTATGCAAAAAATATTGT+TGG - chr1_1:17335930-17335949 None:intergenic 20.0%
!!! GAAGTGTATATTTTAATAAG+AGG + chr1_1:17335957-17335976 Msa0011490:intron 20.0%
!!! AGTGTATATTTTAATAAGAG+GGG + chr1_1:17335959-17335978 Msa0011490:intron 20.0%
!!! CTTAACTTATTTTAAGACTT+GGG - chr1_1:17336198-17336217 None:intergenic 20.0%
!!! ACTTAACTTATTTTAAGACT+TGG - chr1_1:17336199-17336218 None:intergenic 20.0%
!!! AATGTAATTTTTGGATCTTT+TGG + chr1_1:17336422-17336441 Msa0011490:intron 20.0%
!!! GCCTTTTAATTCTTTTTAAA+AGG + chr1_1:17336444-17336463 Msa0011490:intron 20.0%
!! AATAAGCTAACAAACTAAAA+TGG - chr1_1:17336706-17336725 None:intergenic 20.0%
!! ATCCAATTCAAAGAAAAATA+TGG + chr1_1:17336766-17336785 Msa0011490:intron 20.0%
!! TCCAATTCAAAGAAAAATAT+GGG + chr1_1:17336767-17336786 Msa0011490:intron 20.0%
!! TCGAGTAAAATGATATTTAT+TGG - chr1_1:17337064-17337083 None:intergenic 20.0%
!!! GATTTGTGTAAACTTTAAAA+TGG + chr1_1:17337267-17337286 Msa0011490:intron 20.0%
!!! CCGTTCAATATTATTTTATT+CGG - chr1_1:17337347-17337366 None:intergenic 20.0%
!! CCGAATAAAATAATATTGAA+CGG + chr1_1:17337344-17337363 Msa0011490:intron 20.0%
!! ATTAATTCCCTATACTAAAT+TGG - chr1_1:17337757-17337776 None:intergenic 20.0%
!! AATATCATGTAAGATGTTAT+TGG + chr1_1:17337927-17337946 Msa0011490:intron 20.0%
!!! TTTATTCTTCCTTCTTTTAA+TGG + chr1_1:17338097-17338116 Msa0011490:intron 20.0%
!! AAGTAAAAACCATTAAAAGA+AGG - chr1_1:17338109-17338128 None:intergenic 20.0%
!!! TTTTCGAGGAAAAAAAAAAT+AGG - chr1_1:17338156-17338175 None:intergenic 20.0%
!!! AAATACCTAACAATCTTTTT+TGG - chr1_1:17338203-17338222 None:intergenic 20.0%
!!! AAAAGATTGTTAGGTATTTT+CGG + chr1_1:17338204-17338223 Msa0011490:intron 20.0%
!! TGTGTTGTATTTGATATAAA+AGG + chr1_1:17338263-17338282 Msa0011490:intron 20.0%
!! TAATTCCAACAAATAAATAG+GGG + chr1_1:17338670-17338689 Msa0011490:intron 20.0%
!! ATCTTATCACAAATATTTGT+AGG - chr1_1:17339177-17339196 None:intergenic 20.0%
!! TTAAAAAGTGACACTTAAAA+AGG + chr1_1:17339823-17339842 Msa0011490:intron 20.0%
!!! CAATAAAATGAATGACATTT+TGG - chr1_1:17340429-17340448 None:intergenic 20.0%
!! AGTTAATATTAACACAAGTT+AGG - chr1_1:17340468-17340487 None:intergenic 20.0%
!! AGTTCATTAAATAATCGTAA+TGG + chr1_1:17341694-17341713 Msa0011490:intron 20.0%
!! AAAATGAAATTGAGAAAGAA+AGG - chr1_1:17342060-17342079 None:intergenic 20.0%
!!! TAAAATGTGTGCTATTTTTA+GGG - chr1_1:17342179-17342198 None:intergenic 20.0%
!!! ATTTTTTAGTTCTTCTAACT+TGG - chr1_1:17342431-17342450 None:intergenic 20.0%
!! GAAGAACTAAAAAATTGTAT+TGG + chr1_1:17342436-17342455 Msa0011490:intron 20.0%
!!! TAGTTGGTATGTTTTTTTTT+TGG - chr1_1:17342649-17342668 None:intergenic 20.0%
!! AATCTACATCAACAATAATT+TGG - chr1_1:17342849-17342868 None:intergenic 20.0%
!! ATGTAGATTACTAAAAAGAA+TGG + chr1_1:17342860-17342879 Msa0011490:intron 20.0%
!! TGTAGATTACTAAAAAGAAT+GGG + chr1_1:17342861-17342880 Msa0011490:intron 20.0%
!!! TTTTTTTTTTTTGAAGGAAG+TGG - chr1_1:17342913-17342932 None:intergenic 20.0%
!! ATAGAATATATAGAGGTAAT+GGG + chr1_1:17343173-17343192 Msa0011490:intron 20.0%
!!! TTTTTCTTTTTTACCAAAGT+GGG + chr1_1:17343225-17343244 Msa0011490:intron 20.0%
!! TCAAAAGTTTAACATATCAT+CGG - chr1_1:17343550-17343569 None:intergenic 20.0%
!! TAATTAAATTGGGTTAATGT+GGG + chr1_1:17343653-17343672 Msa0011490:intron 20.0%
!!! TTGATTCGTTAAAATTTACA+TGG + chr1_1:17343773-17343792 Msa0011490:intron 20.0%
!!! TTCTTTTTTAAAAGGAAAGT+GGG + chr1_1:17343890-17343909 Msa0011490:intron 20.0%
!! ATTAATAGAAAGAGATTAGT+TGG + chr1_1:17343981-17344000 Msa0011490:intron 20.0%
!! TGGAAAAATATTCTTCTTTA+GGG - chr1_1:17344555-17344574 None:intergenic 20.0%
!! TTGGAAAAATATTCTTCTTT+AGG - chr1_1:17344556-17344575 None:intergenic 20.0%
!! ATGAAATTGTTTACTATATC+GGG - chr1_1:17344667-17344686 None:intergenic 20.0%
!! CAATTTCATAGTGAATATAA+AGG + chr1_1:17344678-17344697 Msa0011490:CDS 20.0%
!!! TTTTTTGACTAGAAATATCA+AGG + chr1_1:17344712-17344731 Msa0011490:intron 20.0%
!! TTCAAATATAGCTTGAAAAT+GGG - chr1_1:17345115-17345134 None:intergenic 20.0%
!! ATTCAAATATAGCTTGAAAA+TGG - chr1_1:17345116-17345135 None:intergenic 20.0%
!!! TTTTAGTAAAAGTTACACTT+TGG - chr1_1:17345189-17345208 None:intergenic 20.0%
!!! TGCATTATAGTACATATTTT+TGG - chr1_1:17345253-17345272 None:intergenic 20.0%
!! TCTTGTACCATTTAAATTTA+TGG - chr1_1:17345394-17345413 None:intergenic 20.0%
!!! CTGCAAAAACATTATTTTTT+TGG - chr1_1:17345721-17345740 None:intergenic 20.0%
!!! ATATTTTAGCTATCTATCTT+GGG - chr1_1:17346364-17346383 None:intergenic 20.0%
!! TCTTGAAAATTAACTTAGAA+TGG + chr1_1:17346607-17346626 Msa0011490:intron 20.0%
!!! TATTTATATTTTTCACAAGG+AGG + chr1_1:17346642-17346661 Msa0011490:intron 20.0%
!! AAATATGAACAATAGAAGTT+TGG + chr1_1:17347241-17347260 Msa0011490:intron 20.0%
!! GAAAAATTGAGTAGAAAATA+TGG - chr1_1:17347549-17347568 None:intergenic 20.0%
!! AAGATAGTTGAAAGTTATAT+TGG - chr1_1:17347616-17347635 None:intergenic 20.0%
!!! ACATTATCTTTCTATTGTTT+TGG + chr1_1:17348202-17348221 Msa0011490:intron 20.0%
!!! AGATACAAACAATTTGAAAT+TGG - chr1_1:17348313-17348332 None:intergenic 20.0%
!!! AGATACAAACAATTTGAAAT+TGG - chr1_1:17348313-17348332 None:intergenic 20.0%
!! TGCTTATTAAATAAAATTGC+AGG + chr1_1:17348469-17348488 Msa0011490:intron 20.0%
!! AGGATTATACTAATATGATT+AGG - chr1_1:17348666-17348685 None:intergenic 20.0%
!!! ATTTTTTGTTTGATTTGAAG+AGG - chr1_1:17349065-17349084 None:intergenic 20.0%
!!! TTATTGGCTAACATTAATTT+CGG + chr1_1:17349675-17349694 Msa0011490:intron 20.0%
!! AATTCTTTGTAGCAAATATT+GGG - chr1_1:17349950-17349969 None:intergenic 20.0%
!! TCATAGAAAATGAAATAGAA+AGG - chr1_1:17350149-17350168 None:intergenic 20.0%
!! TTGGACAATAAATAAAAGTT+TGG + chr1_1:17351106-17351125 Msa0011490:intron 20.0%
!! TAACGTTTGAAAATTATGAA+CGG - chr1_1:17351692-17351711 None:intergenic 20.0%
!! TTAATTCGGTTAATCTAATA+TGG + chr1_1:17352038-17352057 Msa0011490:intron 20.0%
!! CTATTATGATTATTATTAGG+CGG - chr1_1:17352208-17352227 None:intergenic 20.0%
!! CACCTATTATGATTATTATT+AGG - chr1_1:17352211-17352230 None:intergenic 20.0%
!! TAATAATTAGGTTAGAGATT+CGG + chr1_1:17352300-17352319 Msa0011490:intron 20.0%
!! TTATTTAATATGTCTAATCC+GGG - chr1_1:17352961-17352980 None:intergenic 20.0%
!! CTTATTTAATATGTCTAATC+CGG - chr1_1:17352960-17352979 None:intergenic 20.0%
!!! CATTTTAGAGGAAAATTATT+AGG - chr1_1:17352482-17352501 None:intergenic 20.0%
!!! TGTAAACGTATTTTTTTTTG+TGG - chr1_1:17352738-17352757 None:intergenic 20.0%
!! CTTATTTAATATGTCTAATC+CGG + chr1_1:17352960-17352979 Msa0011490:intron 20.0%
!! TTATTTAATATGTCTAATCC+GGG + chr1_1:17352961-17352980 Msa0011490:intron 20.0%
!! CTATTATGATTATTATTAGG+CGG - chr1_1:17352208-17352227 None:intergenic 20.0%
!! CACCTATTATGATTATTATT+AGG - chr1_1:17352211-17352230 None:intergenic 20.0%
!!! TATATTTTTGTTGAGATCTA+AGG - chr1_1:17353542-17353561 None:intergenic 20.0%
!! GAATATTTCATATGAATTTC+AGG - chr1_1:17353951-17353970 None:intergenic 20.0%
!! TTGGAATAATAATCTTCTTT+GGG - chr1_1:17354476-17354495 None:intergenic 20.0%
!!! TTTGGAATAATAATCTTCTT+TGG - chr1_1:17354477-17354496 None:intergenic 20.0%
!!! GAATTTTATAGAGAATATCA+AGG + chr1_1:17354598-17354617 Msa0011490:CDS 20.0%
!!! ATCTAGAACATATACAATTT+AGG + chr1_1:17354784-17354803 Msa0011490:intron 20.0%
!!! TCTAGAACATATACAATTTA+GGG + chr1_1:17354785-17354804 Msa0011490:intron 20.0%
!! TTCCAAAATCCAAAAAAATA+CGG + chr1_1:17355033-17355052 Msa0011490:intron 20.0%
!! AAAATAGGATCAATTTGATT+TGG - chr1_1:17355063-17355082 None:intergenic 20.0%
!! TTAAATCTTCATTAACATGT+AGG + chr1_1:17355211-17355230 Msa0011490:intron 20.0%
!! TAAATCTTCATTAACATGTA+GGG + chr1_1:17355212-17355231 Msa0011490:intron 20.0%
!!! ATCAAGTGTATCATTTTTTG+TGG + chr1_1:17332628-17332647 Msa0011490:CDS 25.0%
! TGTAATATGTAGAACTTCTA+CGG - chr1_1:17332920-17332939 None:intergenic 25.0%
! AGAAGTTCTACATATTACAA+AGG + chr1_1:17332921-17332940 Msa0011490:intron 25.0%
! TTCTACATATTACAAAGGTT+GGG + chr1_1:17332926-17332945 Msa0011490:intron 25.0%
! AAATACTAACGAATGTTCTA+AGG + chr1_1:17333075-17333094 Msa0011490:intron 25.0%
! AATACTAACGAATGTTCTAA+GGG + chr1_1:17333076-17333095 Msa0011490:intron 25.0%
!!! AAATGTAAAGTTGTTTTGAG+TGG - chr1_1:17333354-17333373 None:intergenic 25.0%
! GTTGAATTTAAATCTTTACG+AGG - chr1_1:17333656-17333675 None:intergenic 25.0%
! TTGTGAATAATTGAAGACTT+AGG - chr1_1:17333777-17333796 None:intergenic 25.0%
!!! TATTCACACATTTTTTTAGG+TGG + chr1_1:17334243-17334262 Msa0011490:intron 25.0%
! AAACCATGTCTTCATTATTA+AGG - chr1_1:17334270-17334289 None:intergenic 25.0%
!!! TTCTTATTTTTCTTTGTAGG+AGG + chr1_1:17334302-17334321 Msa0011490:intron 25.0%
! TTAGAGAAATACTCTTCTTT+GGG - chr1_1:17334347-17334366 None:intergenic 25.0%
! TAGTTTCTCCAAAAATGTTA+AGG + chr1_1:17334469-17334488 Msa0011490:CDS 25.0%
! CGAATTTATTATATGCCTTA+TGG + chr1_1:17334602-17334621 Msa0011490:intron 25.0%
!!! CTTGCAATCACTAAATTTTT+TGG - chr1_1:17334651-17334670 None:intergenic 25.0%
! ATTTCCATACAAAATAAGTG+GGG - chr1_1:17334708-17334727 None:intergenic 25.0%
!!! TACGATAACACTTTTAAGAT+CGG + chr1_1:17334810-17334829 Msa0011490:intron 25.0%
! AGTTAATTCATGCTGAATTA+GGG + chr1_1:17334913-17334932 Msa0011490:intron 25.0%
! AGATTGTATAATATACCACA+TGG + chr1_1:17335010-17335029 Msa0011490:intron 25.0%
! TTAATCTCATTTGATGAACT+TGG + chr1_1:17335101-17335120 Msa0011490:intron 25.0%
! ATTCAGGACATATACAATTT+GGG + chr1_1:17335126-17335145 Msa0011490:intron 25.0%
! AATTCACAAAAATATAAGGG+AGG - chr1_1:17335194-17335213 None:intergenic 25.0%
! TGAATTATTCATTGATATGC+AGG + chr1_1:17335505-17335524 Msa0011490:intron 25.0%
!! AATGGTACTCAAATTTTTGT+AGG + chr1_1:17335616-17335635 Msa0011490:CDS 25.0%
!! ATTTTCCATGAAATTTCTAC+TGG + chr1_1:17335709-17335728 Msa0011490:intron 25.0%
!!! ATATTTTGATGGAATTTCTG+TGG - chr1_1:17335774-17335793 None:intergenic 25.0%
! AATATTGTTGGGTATGAAAT+TGG - chr1_1:17335918-17335937 None:intergenic 25.0%
!!! GTGTATATTTTAATAAGAGG+GGG + chr1_1:17335960-17335979 Msa0011490:intron 25.0%
!!! GCATAATTCAAGTTTCTTTT+AGG + chr1_1:17335989-17336008 Msa0011490:intron 25.0%
!!! TATGGAGAGTGTATATTTTA+GGG - chr1_1:17336031-17336050 None:intergenic 25.0%
! ACATACCCATTTATTTATGT+AGG + chr1_1:17336090-17336109 Msa0011490:intron 25.0%
! AGTGACCTACATAAATAAAT+GGG - chr1_1:17336098-17336117 None:intergenic 25.0%
! AAGTGACCTACATAAATAAA+TGG - chr1_1:17336099-17336118 None:intergenic 25.0%
!! TCCCATATTTTTCTTTGAAT+TGG - chr1_1:17336771-17336790 None:intergenic 25.0%
! AATATTGAACGGTGTAATAT+TGG + chr1_1:17337355-17337374 Msa0011490:intron 25.0%
! AGTCGAATTTCAAACTTTAA+TGG + chr1_1:17337589-17337608 Msa0011490:intron 25.0%
! TCAAATATGTCATCTATTGA+AGG - chr1_1:17337844-17337863 None:intergenic 25.0%
! TGTGAATTAGTAGACAAATA+TGG - chr1_1:17337898-17337917 None:intergenic 25.0%
! AAATACAACACAAATTCCAT+TGG - chr1_1:17338255-17338274 None:intergenic 25.0%
! ATTGTTTAAGCATATATGCA+AGG + chr1_1:17338443-17338462 Msa0011490:intron 25.0%
! TGTTAAACCAAATAAGTAAC+AGG + chr1_1:17338808-17338827 Msa0011490:intron 25.0%
! TCTACTTACACTTTATTACT+TGG + chr1_1:17338871-17338890 Msa0011490:intron 25.0%
! ATTGTCTTAGTAACCAATTT+GGG - chr1_1:17339123-17339142 None:intergenic 25.0%
! AGTCATCAAGAGATTTATTT+GGG + chr1_1:17339203-17339222 Msa0011490:intron 25.0%
! AAAAGTGGAATATAGTTAAG+TGG + chr1_1:17339244-17339263 Msa0011490:intron 25.0%
! TTTATGATCCTCATAAACTT+TGG + chr1_1:17339364-17339383 Msa0011490:intron 25.0%
! TTATGATCCTCATAAACTTT+GGG + chr1_1:17339365-17339384 Msa0011490:intron 25.0%
! TTATCTCACAAGTACATAAA+AGG + chr1_1:17339396-17339415 Msa0011490:intron 25.0%
!!! AAGAAGTATTTTAAAGGCAT+TGG + chr1_1:17339464-17339483 Msa0011490:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG - chr1_1:17339633-17339652 None:intergenic 25.0%
! TAAATAACTAAGGGTAATGT+TGG - chr1_1:17339684-17339703 None:intergenic 25.0%
! TTACCCTTAGTTATTTATTG+TGG + chr1_1:17339687-17339706 Msa0011490:intron 25.0%
! TCTCCACAATAAATAACTAA+GGG - chr1_1:17339693-17339712 None:intergenic 25.0%
! GTAACATTTATTAAGTGTCT+TGG + chr1_1:17339787-17339806 Msa0011490:intron 25.0%
!!! CTTAAGGATGTTATTTTCAT+TGG + chr1_1:17339862-17339881 Msa0011490:intron 25.0%
!!! ATGTTATTTTCATTGGATCA+TGG + chr1_1:17339869-17339888 Msa0011490:intron 25.0%
!!! TGTTATTTTCATTGGATCAT+GGG + chr1_1:17339870-17339889 Msa0011490:intron 25.0%
! ATGTTAATATTCAGGATAGA+TGG + chr1_1:17339970-17339989 Msa0011490:intron 25.0%
! TGTTAATATTCAGGATAGAT+GGG + chr1_1:17339971-17339990 Msa0011490:intron 25.0%
! AATTTGGAAATTGTCAGTTT+CGG + chr1_1:17340071-17340090 Msa0011490:intron 25.0%
! ACATGTTTGCAATAACTATT+TGG + chr1_1:17340350-17340369 Msa0011490:intron 25.0%
!!! TTCTGAAATAATCATACTCT+TGG + chr1_1:17340385-17340404 Msa0011490:intron 25.0%
! AATATTAACACAAGTTAGGT+CGG - chr1_1:17340464-17340483 None:intergenic 25.0%
! TTAATCGTCACATTGTTAAA+TGG + chr1_1:17340503-17340522 Msa0011490:intron 25.0%
!! TGCATTAACTTGAATATTGA+TGG + chr1_1:17340544-17340563 Msa0011490:intron 25.0%
!!! CCTTTTTTGTTTAGTTAAGT+CGG - chr1_1:17340809-17340828 None:intergenic 25.0%
! TTTCTATGAAACTTATTCCA+AGG - chr1_1:17340996-17341015 None:intergenic 25.0%
!!! TCTAAAACTCATTTTTTCCA+AGG - chr1_1:17341103-17341122 None:intergenic 25.0%
! TGTAAAGCGACATATAATTT+GGG - chr1_1:17341181-17341200 None:intergenic 25.0%
! TTGTAAAGCGACATATAATT+TGG - chr1_1:17341182-17341201 None:intergenic 25.0%
! TAAAGAATTGAAAGAAGAGA+GGG - chr1_1:17341258-17341277 None:intergenic 25.0%
! TTAAAGAATTGAAAGAAGAG+AGG - chr1_1:17341259-17341278 None:intergenic 25.0%
! TTGTCCTTAATAAATGGTTT+GGG - chr1_1:17341291-17341310 None:intergenic 25.0%
! TATGAGTTGTCCTTAATAAA+TGG - chr1_1:17341297-17341316 None:intergenic 25.0%
! CCTAAAACATCATACAATTT+GGG + chr1_1:17341382-17341401 Msa0011490:intron 25.0%
!! TTACTTATAATTTGGAACGA+AGG + chr1_1:17341480-17341499 Msa0011490:intron 25.0%
!! TACTTATAATTTGGAACGAA+GGG + chr1_1:17341481-17341500 Msa0011490:intron 25.0%
!!! TTTTGTTTGACTTGATATCA+TGG - chr1_1:17341625-17341644 None:intergenic 25.0%
! GATATCAAGTCAAACAAAAA+AGG + chr1_1:17341626-17341645 Msa0011490:intron 25.0%
! ATTAAATAATCGTAATGGCA+CGG + chr1_1:17341699-17341718 Msa0011490:intron 25.0%
! TGATCATATGATAATTCCAT+TGG + chr1_1:17341753-17341772 Msa0011490:intron 25.0%
! AAAAAAATTGTGGCAGATAT+TGG - chr1_1:17341877-17341896 None:intergenic 25.0%
!!! ACTTTTTTCAATAGATCAAC+TGG + chr1_1:17341991-17342010 Msa0011490:CDS 25.0%
!!! AAAATGTGTGCTATTTTTAG+GGG - chr1_1:17342178-17342197 None:intergenic 25.0%
!!! CTAAAATGTGTGCTATTTTT+AGG - chr1_1:17342180-17342199 None:intergenic 25.0%
! ATAGACGGATAAAAATAATG+AGG + chr1_1:17342254-17342273 Msa0011490:intron 25.0%
! AAAATAAAGGAAGAAATGAG+TGG + chr1_1:17342336-17342355 Msa0011490:intron 25.0%
!! TGGAAAAAAATGAAGAGTTT+TGG + chr1_1:17342356-17342375 Msa0011490:intron 25.0%
!! GGAAAAAAATGAAGAGTTTT+GGG + chr1_1:17342357-17342376 Msa0011490:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + chr1_1:17342439-17342458 Msa0011490:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG + chr1_1:17342443-17342462 Msa0011490:intron 25.0%
!!! TTTTTTGGTTACAATCTAGT+TGG - chr1_1:17342634-17342653 None:intergenic 25.0%
!!! AATTAGAACTAAGTTCTAAG+TGG - chr1_1:17342947-17342966 None:intergenic 25.0%
! CTATATATTCTATGCATTTG+CGG - chr1_1:17343166-17343185 None:intergenic 25.0%
! CAAATGCATAGAATATATAG+AGG + chr1_1:17343166-17343185 Msa0011490:intron 25.0%
! CATAGAATATATAGAGGTAA+TGG + chr1_1:17343172-17343191 Msa0011490:intron 25.0%
!!! GTTTTTCTTTTTTACCAAAG+TGG + chr1_1:17343224-17343243 Msa0011490:intron 25.0%
! TTAATTAAATTGGGTTAAGG+TGG + chr1_1:17343582-17343601 Msa0011490:intron 25.0%
! TAATTAAATTGGGTTAAGGT+GGG + chr1_1:17343583-17343602 Msa0011490:intron 25.0%
! CTAATTAAATTGGGTTAATG+TGG + chr1_1:17343652-17343671 Msa0011490:intron 25.0%
! AATTAAATTGGGTTAATGTG+GGG + chr1_1:17343654-17343673 Msa0011490:intron 25.0%
!!! GTCACTACTTCTTTTTTAAA+AGG + chr1_1:17343882-17343901 Msa0011490:intron 25.0%
!!! CTTCTTTTTTAAAAGGAAAG+TGG + chr1_1:17343889-17343908 Msa0011490:intron 25.0%
! CCATTAGGTATAATACTATT+AGG - chr1_1:17344307-17344326 None:intergenic 25.0%
! CCTAATAGTATTATACCTAA+TGG + chr1_1:17344304-17344323 Msa0011490:CDS 25.0%
!!! AATTTTTCAAATATATGGCC+AGG + chr1_1:17344508-17344527 Msa0011490:intron 25.0%
! GGAAAATTAGCCAAAATTAA+AGG - chr1_1:17344893-17344912 None:intergenic 25.0%
!! TAATTTTCCATCTGCAATAA+AGG + chr1_1:17344904-17344923 Msa0011490:CDS 25.0%
!!! TTTTGAAAAAGAGAGTACTT+AGG - chr1_1:17345058-17345077 None:intergenic 25.0%
! TCAAATATAGCTTGAAAATG+GGG - chr1_1:17345114-17345133 None:intergenic 25.0%
! ATTTGAATTGACAATGAGTT+CGG + chr1_1:17345128-17345147 Msa0011490:intron 25.0%
! TTAAAGCTTCATTACAATCT+AGG + chr1_1:17345291-17345310 Msa0011490:intron 25.0%
! TAAAGCTTCATTACAATCTA+GGG + chr1_1:17345292-17345311 Msa0011490:intron 25.0%
! GGAGAAACCATAAATTTAAA+TGG + chr1_1:17345384-17345403 Msa0011490:intron 25.0%
!! AAATGGTACAAGAATTTTTG+TGG + chr1_1:17345401-17345420 Msa0011490:intron 25.0%
!! AATGGTACAAGAATTTTTGT+GGG + chr1_1:17345402-17345421 Msa0011490:intron 25.0%
! TCCATCTACTAGAATAATAT+GGG + chr1_1:17345437-17345456 Msa0011490:intron 25.0%
!! GAATGTTTGAAGTTAAAATG+AGG - chr1_1:17345764-17345783 None:intergenic 25.0%
! GAACTTTATGAAAGAAAAAG+AGG - chr1_1:17345801-17345820 None:intergenic 25.0%
! CATAAAGTTCACCTATATAT+TGG + chr1_1:17345811-17345830 Msa0011490:intron 25.0%
!! TTAATAGGTATCGTTATTAG+AGG - chr1_1:17345918-17345937 None:intergenic 25.0%
! ACGATACCTATTAAGATTTA+AGG + chr1_1:17345924-17345943 Msa0011490:intron 25.0%
! CGATACCTATTAAGATTTAA+GGG + chr1_1:17345925-17345944 Msa0011490:intron 25.0%
! TAACACCCTTAAATCTTAAT+AGG - chr1_1:17345933-17345952 None:intergenic 25.0%
!!! GTTTCGTTTCCATTATTTTT+TGG - chr1_1:17345977-17345996 None:intergenic 25.0%
! CTTACATTATAGGTATACAT+AGG - chr1_1:17346112-17346131 None:intergenic 25.0%
! ATACCTATAATGTAAGCTTA+TGG + chr1_1:17346116-17346135 Msa0011490:intron 25.0%
! TAAAATTTGTGTCTGCAATT+AGG - chr1_1:17346227-17346246 None:intergenic 25.0%
!!! GATATTTTAGCTATCTATCT+TGG - chr1_1:17346365-17346384 None:intergenic 25.0%
! AGTGATATAAAACAAGAACA+TGG - chr1_1:17346981-17347000 None:intergenic 25.0%
! AGTAGAAAATATGGTCAAAT+AGG - chr1_1:17347540-17347559 None:intergenic 25.0%
! CTAATATGTGCTCTTTATAA+TGG + chr1_1:17347852-17347871 Msa0011490:intron 25.0%
!!! CCATTTATTTTTTCCTCTAA+TGG - chr1_1:17347880-17347899 None:intergenic 25.0%
! CCATTAGAGGAAAAAATAAA+TGG + chr1_1:17347877-17347896 Msa0011490:intron 25.0%
! AAAAACCAACAAAATACCTT+TGG + chr1_1:17347915-17347934 Msa0011490:intron 25.0%
! AAAACCAACAAAATACCTTT+GGG + chr1_1:17347916-17347935 Msa0011490:intron 25.0%
! AAGAACAAGAAATACTTTGA+GGG - chr1_1:17348419-17348438 None:intergenic 25.0%
! AAAGAACAAGAAATACTTTG+AGG - chr1_1:17348420-17348439 None:intergenic 25.0%
!! ATTTCTTGTTCTTTTTGATG+TGG + chr1_1:17348426-17348445 Msa0011490:intron 25.0%
! CTACTAAGATTATAAAAGGA+TGG - chr1_1:17348578-17348597 None:intergenic 25.0%
!! CATCCTTTTATAATCTTAGT+AGG + chr1_1:17348576-17348595 Msa0011490:intron 25.0%
! ACACCTACTAAGATTATAAA+AGG - chr1_1:17348582-17348601 None:intergenic 25.0%
!!! TTAGGAGTAAACTTTTTCAT+TGG + chr1_1:17348611-17348630 Msa0011490:intron 25.0%
!! TATGTTTAGAATAAGCAGAA+AGG - chr1_1:17348686-17348705 None:intergenic 25.0%
!! TTTTTGTTAAAATGACTGTG+AGG - chr1_1:17348749-17348768 None:intergenic 25.0%
! TCTTATATACTATACTAAGG+AGG - chr1_1:17348825-17348844 None:intergenic 25.0%
!!! AGAAATTAGAGTCTTGTTAA+TGG + chr1_1:17349173-17349192 Msa0011490:intron 25.0%
! TTTAAAGAAGAAACATTTGC+AGG + chr1_1:17349260-17349279 Msa0011490:intron 25.0%
! AAAATGCTAGATATCAAGAA+TGG + chr1_1:17349519-17349538 Msa0011490:intron 25.0%
!! TATTGGCTAACATTAATTTC+GGG + chr1_1:17349676-17349695 Msa0011490:intron 25.0%
! CGATCATATCATAATTTCAT+AGG + chr1_1:17349827-17349846 Msa0011490:intron 25.0%
! ATTCTTTGTAGCAAATATTG+GGG - chr1_1:17349949-17349968 None:intergenic 25.0%
! CAATTCTTTGTAGCAAATAT+TGG - chr1_1:17349951-17349970 None:intergenic 25.0%
!!! ACTTTTTTCAATAGATCATC+TGG + chr1_1:17350065-17350084 Msa0011490:CDS 25.0%
!! ACACAATAAAGCATTAGATA+TGG - chr1_1:17350367-17350386 None:intergenic 25.0%
!! TTTATTGTGTTGAACACTTT+TGG + chr1_1:17350377-17350396 Msa0011490:intron 25.0%
! AGTTATAAGTTAACTCATGT+AGG + chr1_1:17350725-17350744 Msa0011490:intron 25.0%
!!! GTATTTTGATCAGTTTGTAT+AGG + chr1_1:17350821-17350840 Msa0011490:intron 25.0%
!!! GTGCGATTTTTAAGAAAATA+GGG - chr1_1:17351028-17351047 None:intergenic 25.0%
! TCGTGTATTGAATATTGATA+AGG - chr1_1:17351203-17351222 None:intergenic 25.0%
! GTGGTTTAACTCAAAAATAA+TGG - chr1_1:17351271-17351290 None:intergenic 25.0%
!! AGTCTAACAATTCTTTTCAA+AGG + chr1_1:17351295-17351314 Msa0011490:intron 25.0%
! ATAATGAATCTCATACAACT+TGG + chr1_1:17351864-17351883 Msa0011490:intron 25.0%
! ATGTTTCTCTCTAAATCTAA+TGG + chr1_1:17351906-17351925 Msa0011490:intron 25.0%
! ATGTTTCTCTCTAAATCTAA+TGG + chr1_1:17351906-17351925 Msa0011490:intron 25.0%
! AATACTCTTATAGTAGTGTA+TGG - chr1_1:17352016-17352035 None:intergenic 25.0%
! CGCCTAATAATAATCATAAT+AGG + chr1_1:17352206-17352225 Msa0011490:intron 25.0%
!! CGGATTAGACATATTAAATA+AGG + chr1_1:17352330-17352349 Msa0011490:intron 25.0%
!!! AAACGTATTTTTTTTTGTGG+TGG - chr1_1:17352735-17352754 None:intergenic 25.0%
!! ATCTTTTAACCAAGAAAACA+CGG - chr1_1:17353021-17353040 None:intergenic 25.0%
!! CGGATTAGACATATTAAATA+AGG - chr1_1:17352330-17352349 None:intergenic 25.0%
!! ATCTTTTAACCAAGAAAACA+CGG + chr1_1:17353021-17353040 Msa0011490:intron 25.0%
!!! TATTTTAGAGGGAATTTGTT+AGG + chr1_1:17353259-17353278 Msa0011490:intron 25.0%
! AACCTAATGCAGTAATTTAA+AGG + chr1_1:17353295-17353314 Msa0011490:intron 25.0%
! TTCCTTTAAATTACTGCATT+AGG - chr1_1:17353300-17353319 None:intergenic 25.0%
! CGCCTAATAATAATCATAAT+AGG + chr1_1:17352206-17352225 Msa0011490:intron 25.0%
! AAGATTTCATACCTAAAACA+AGG + chr1_1:17354288-17354307 Msa0011490:CDS 25.0%
! AATTTCAAAATTTACTTGCC+AGG + chr1_1:17354428-17354447 Msa0011490:intron 25.0%
! TGGAATAATAATCTTCTTTG+GGG - chr1_1:17354475-17354494 None:intergenic 25.0%
! ACCAATATCAAATGTGTATA+AGG - chr1_1:17354501-17354520 None:intergenic 25.0%
! TAGATAAAGTTAGCAGAAAA+GGG - chr1_1:17354634-17354653 None:intergenic 25.0%
! ATTACTAAAATGCAACTTAC+TGG + chr1_1:17354759-17354778 Msa0011490:intron 25.0%
! CTAGAACATATACAATTTAG+GGG + chr1_1:17354786-17354805 Msa0011490:intron 25.0%
!!! ATTGATCCTATTTTCAAGTT+AGG + chr1_1:17355069-17355088 Msa0011490:intron 25.0%
!!! TTGATCCTATTTTCAAGTTA+GGG + chr1_1:17355070-17355089 Msa0011490:intron 25.0%
! ATATACCCTAACTTGAAAAT+AGG - chr1_1:17355078-17355097 None:intergenic 25.0%
! CAAGTTAGGGTATATATATT+TGG + chr1_1:17355083-17355102 Msa0011490:intron 25.0%
! GTTTGTACCATTTATGTTTA+TGG - chr1_1:17355314-17355333 None:intergenic 25.0%
! AACCATCTACTAGAATAATA+TGG + chr1_1:17355356-17355375 Msa0011490:CDS 25.0%
! ACCATCTACTAGAATAATAT+GGG + chr1_1:17355357-17355376 Msa0011490:CDS 25.0%
TAGAAATAAGTCTCTCCATA+TGG - chr1_1:17332785-17332804 None:intergenic 30.0%
!! ACTTATTTCTACAGACCTAA+TGG + chr1_1:17332794-17332813 Msa0011490:CDS 30.0%
!! CTTATTTCTACAGACCTAAT+GGG + chr1_1:17332795-17332814 Msa0011490:CDS 30.0%
CAATGAAATCGACAATTAGA+CGG - chr1_1:17332835-17332854 None:intergenic 30.0%
GTTCTACATATTACAAAGGT+TGG + chr1_1:17332925-17332944 Msa0011490:intron 30.0%
! TCATGAGTTTAATTGGTTCA+TGG + chr1_1:17332955-17332974 Msa0011490:intron 30.0%
AAAAAAACCAGACATCAAAC+CGG + chr1_1:17333795-17333814 Msa0011490:intron 30.0%
ATTTGGCTATAGTTTCATCT+CGG - chr1_1:17333856-17333875 None:intergenic 30.0%
GTTCAGTTATTTGAGCAATT+TGG - chr1_1:17333873-17333892 None:intergenic 30.0%
AACTGAACCAAATTAACTCT+TGG + chr1_1:17333885-17333904 Msa0011490:intron 30.0%
GTTGCAAGAGACATATAATT+CGG - chr1_1:17333912-17333931 None:intergenic 30.0%
! GTAATTTCAGCTCAAAGTTT+TGG + chr1_1:17333996-17334015 Msa0011490:intron 30.0%
AATCTCTGAATTGAGTGTAT+TGG - chr1_1:17334163-17334182 None:intergenic 30.0%
TGTCTAATGAATTGTGTTCT+AGG - chr1_1:17334191-17334210 None:intergenic 30.0%
ACACAATTCATTAGACAACA+AGG + chr1_1:17334194-17334213 Msa0011490:CDS 30.0%
AATGAAGACATGGTTTACTT+TGG + chr1_1:17334274-17334293 Msa0011490:intron 30.0%
CTTAGAGAAATACTCTTCTT+TGG - chr1_1:17334348-17334367 None:intergenic 30.0%
!! CAAAGAAGAGTATTTCTCTA+AGG + chr1_1:17334346-17334365 Msa0011490:CDS 30.0%
GCTTTGTACACATTTGATAT+TGG + chr1_1:17334368-17334387 Msa0011490:CDS 30.0%
GATATTGGTCAAAATGATCT+TGG + chr1_1:17334383-17334402 Msa0011490:CDS 30.0%
! GAGAAACTATTGATTATCTC+TGG - chr1_1:17334458-17334477 None:intergenic 30.0%
! CTGAACTACCTTAACATTTT+TGG - chr1_1:17334480-17334499 None:intergenic 30.0%
!! GGTTCAATAACTTTTTAAGC+CGG + chr1_1:17334831-17334850 Msa0011490:intron 30.0%
!!! ACTTTTAAGATCGATTGAAC+CGG - chr1_1:17334853-17334872 None:intergenic 30.0%
GAGTTAATTCATGCTGAATT+AGG + chr1_1:17334912-17334931 Msa0011490:intron 30.0%
GTTAATTCATGCTGAATTAG+GGG + chr1_1:17334914-17334933 Msa0011490:intron 30.0%
AGCAAAATCAAAAGTGAGAT+GGG + chr1_1:17334941-17334960 Msa0011490:intron 30.0%
! GGCAATTTTCGTTTTGTATT+GGG + chr1_1:17334962-17334981 Msa0011490:intron 30.0%
GTATTGGGTGTAATTTAACA+AGG + chr1_1:17334977-17334996 Msa0011490:intron 30.0%
GATTCAGGACATATACAATT+TGG + chr1_1:17335125-17335144 Msa0011490:intron 30.0%
! GAATTTTCCATTAGCTGAAA+AGG + chr1_1:17335209-17335228 Msa0011490:intron 30.0%
! TTTTCATCCTTTTCAGCTAA+TGG - chr1_1:17335219-17335238 None:intergenic 30.0%
TTAGCTGAAAAGGATGAAAA+TGG + chr1_1:17335219-17335238 Msa0011490:intron 30.0%
TCTTGTGAGATGGAATATTA+AGG - chr1_1:17335865-17335884 None:intergenic 30.0%
CATCTCACAAGAAATACATT+GGG + chr1_1:17335873-17335892 Msa0011490:intron 30.0%
!! TTCAAGTTTCTTTTAGGTAG+AGG + chr1_1:17335995-17336014 Msa0011490:intron 30.0%
!! TCAAGTTTCTTTTAGGTAGA+GGG + chr1_1:17335996-17336015 Msa0011490:intron 30.0%
!! GTATGGAGAGTGTATATTTT+AGG - chr1_1:17336032-17336051 None:intergenic 30.0%
CTTTATAATCTTCTCGAGTA+TGG - chr1_1:17336049-17336068 None:intergenic 30.0%
CTCGAGAAGATTATAAAGAT+AGG + chr1_1:17336051-17336070 Msa0011490:intron 30.0%
TTTGTTTATGTTATCTGCAG+TGG - chr1_1:17336567-17336586 None:intergenic 30.0%
AGAAATCGGTACTTAAAGAA+CGG + chr1_1:17336855-17336874 Msa0011490:intron 30.0%
!! AGTTTTTGCTATGAAGAGTT+TGG - chr1_1:17337808-17337827 None:intergenic 30.0%
ATATGTCATCTATTGAAGGA+CGG - chr1_1:17337840-17337859 None:intergenic 30.0%
AGAGTCCAAAAAAGATTGTT+AGG + chr1_1:17338195-17338214 Msa0011490:intron 30.0%
!! CAATTGTTTTGCAGTTTATG+TGG - chr1_1:17338313-17338332 None:intergenic 30.0%
ATAAACTGCAAAACAATTGC+AGG + chr1_1:17338314-17338333 Msa0011490:intron 30.0%
TAAACTGCAAAACAATTGCA+GGG + chr1_1:17338315-17338334 Msa0011490:intron 30.0%
TAGACTATAACTACAGTCAA+AGG + chr1_1:17338490-17338509 Msa0011490:intron 30.0%
AGTTGTACCTTATGATTGTA+CGG - chr1_1:17338564-17338583 None:intergenic 30.0%
AATCTCCCCTATTTATTTGT+TGG - chr1_1:17338678-17338697 None:intergenic 30.0%
! AACAACTCCTGTTACTTATT+TGG - chr1_1:17338818-17338837 None:intergenic 30.0%
AATAAGTAACAGGAGTTGTT+TGG + chr1_1:17338818-17338837 Msa0011490:intron 30.0%
ACATTTACTTTCATACCTGA+TGG - chr1_1:17338927-17338946 None:intergenic 30.0%
AGTAAATGTCCAAAAGTCTA+AGG + chr1_1:17338938-17338957 Msa0011490:intron 30.0%
! AACACATATCCTTAGACTTT+TGG - chr1_1:17338950-17338969 None:intergenic 30.0%
TCTAAGGATATGTGTTCTAA+TGG + chr1_1:17338954-17338973 Msa0011490:intron 30.0%
CATTGTCTTAGTAACCAATT+TGG - chr1_1:17339124-17339143 None:intergenic 30.0%
TGCATCTGCATAGTATAAAT+AGG - chr1_1:17339147-17339166 None:intergenic 30.0%
GAGTCATCAAGAGATTTATT+TGG + chr1_1:17339202-17339221 Msa0011490:intron 30.0%
GTCATCAAGAGATTTATTTG+GGG + chr1_1:17339204-17339223 Msa0011490:intron 30.0%
! TTTCTGATTTTGCTCTTCTT+AGG + chr1_1:17339322-17339341 Msa0011490:intron 30.0%
!! GGTTGATTTTGTCAACATTT+TGG + chr1_1:17339549-17339568 Msa0011490:intron 30.0%
AAGTGACACTTAAAAAGGAA+CGG - chr1_1:17339828-17339847 None:intergenic 30.0%
!!! TCCTTTTTAAGTGTCACTTT+TGG + chr1_1:17339593-17339612 Msa0011490:intron 30.0%
TCCAAAAGTGACACTTAAAA+AGG - chr1_1:17339597-17339616 None:intergenic 30.0%
CTCTCCACAATAAATAACTA+AGG - chr1_1:17339694-17339713 None:intergenic 30.0%
AAGTGACACTTAAAAAGGAA+CGG + chr1_1:17339828-17339847 Msa0011490:intron 30.0%
TTGGAATAAACTGATGACAA+TGG + chr1_1:17339894-17339913 Msa0011490:intron 30.0%
ATCCTGAATATTAACATCAG+AGG - chr1_1:17339967-17339986 None:intergenic 30.0%
! AGCTGAATGATAATGAAAGT+TGG + chr1_1:17340043-17340062 Msa0011490:intron 30.0%
! GCTGAATGATAATGAAAGTT+GGG + chr1_1:17340044-17340063 Msa0011490:intron 30.0%
ATGAAAGTTGGGATTGAATT+TGG + chr1_1:17340055-17340074 Msa0011490:intron 30.0%
! AGTTTGTAACCATGTTTTCA+AGG - chr1_1:17340308-17340327 None:intergenic 30.0%
GGTTACAAACTATGTTTACA+TGG + chr1_1:17340317-17340336 Msa0011490:intron 30.0%
ATTGCAAACATGTTTCCAAA+AGG - chr1_1:17340343-17340362 None:intergenic 30.0%
TGTTTGCAATAACTATTTGG+TGG + chr1_1:17340353-17340372 Msa0011490:intron 30.0%
TAACAATGTGACGATTAATG+TGG - chr1_1:17340501-17340520 None:intergenic 30.0%
AAGTTAATGCATCATTCTTG+AGG - chr1_1:17340535-17340554 None:intergenic 30.0%
TTGAATATTGATGGAAGTTG+TGG + chr1_1:17340553-17340572 Msa0011490:intron 30.0%
! TGTTGGATTTTCTTCTAATG+AGG + chr1_1:17340631-17340650 Msa0011490:intron 30.0%
! GTTGGATTTTCTTCTAATGA+GGG + chr1_1:17340632-17340651 Msa0011490:intron 30.0%
! TTGGATTTTCTTCTAATGAG+GGG + chr1_1:17340633-17340652 Msa0011490:intron 30.0%
GATTTAGATGTTGAAGAAGA+TGG - chr1_1:17340769-17340788 None:intergenic 30.0%
CCGACTTAACTAAACAAAAA+AGG + chr1_1:17340806-17340825 Msa0011490:intron 30.0%
ATTGGTTAAACAACCAGAAT+AGG + chr1_1:17340855-17340874 Msa0011490:intron 30.0%
TTAAACAACCAGAATAGGTA+AGG + chr1_1:17340860-17340879 Msa0011490:intron 30.0%
TAATAGAACCTTACCTATTC+TGG - chr1_1:17340871-17340890 None:intergenic 30.0%
ATTAAATAGTGATACTCCCT+CGG + chr1_1:17340887-17340906 Msa0011490:intron 30.0%
ATAGTTTCTTGTGTTATCCT+TGG + chr1_1:17340976-17340995 Msa0011490:intron 30.0%
AATTGCATTTAATCTCTCCT+TGG + chr1_1:17341083-17341102 Msa0011490:intron 30.0%
CTTTCCCAAACCATTTATTA+AGG + chr1_1:17341284-17341303 Msa0011490:intron 30.0%
GTTGTCCTTAATAAATGGTT+TGG - chr1_1:17341292-17341311 None:intergenic 30.0%
GCCTAAAACATCATACAATT+TGG + chr1_1:17341381-17341400 Msa0011490:intron 30.0%
! CCCAAATTGTATGATGTTTT+AGG - chr1_1:17341385-17341404 None:intergenic 30.0%
ATGTGACTTAGAAACTCAAT+TGG - chr1_1:17341811-17341830 None:intergenic 30.0%
AGGACAATCGAAAAAAATTG+TGG - chr1_1:17341887-17341906 None:intergenic 30.0%
CGAATCATTCTTGATTTCAT+AGG + chr1_1:17342030-17342049 Msa0011490:CDS 30.0%
! ATTTTCTTTCAGCGTATGTA+AGG + chr1_1:17342075-17342094 Msa0011490:intron 30.0%
! TATCATAACAGCTTTGTCTT+TGG - chr1_1:17342137-17342156 None:intergenic 30.0%
AATGGAGGACTTGAAAATAA+AGG + chr1_1:17342323-17342342 Msa0011490:intron 30.0%
!!! AAAATGAAGAGTTTTGGGAA+AGG + chr1_1:17342362-17342381 Msa0011490:intron 30.0%
!! TTTAGTTCTTCTAACTTGGA+AGG - chr1_1:17342427-17342446 None:intergenic 30.0%
CTAAAAAATTGTATTGGAGG+AGG + chr1_1:17342442-17342461 Msa0011490:intron 30.0%
!! AATTGACTCCATTTTATGAG+TGG + chr1_1:17343116-17343135 Msa0011490:intron 30.0%
CTCAATTACCACTCATAAAA+TGG - chr1_1:17343127-17343146 None:intergenic 30.0%
! CATTTTATGAGTGGTAATTG+AGG + chr1_1:17343125-17343144 Msa0011490:intron 30.0%
!! AATATATAGAGGTAATGGGA+GGG + chr1_1:17343177-17343196 Msa0011490:intron 30.0%
AAAGCTCAAAGTTGTAGTAA+TGG - chr1_1:17343363-17343382 None:intergenic 30.0%
AATTAAATTGGGTTAAGGTG+GGG + chr1_1:17343584-17343603 Msa0011490:intron 30.0%
ATGTGGGTCACATATAAATT+TGG - chr1_1:17343805-17343824 None:intergenic 30.0%
! AATAGAAAGAGATTAGTTGG+AGG + chr1_1:17343984-17344003 Msa0011490:intron 30.0%
! ATAGAAAGAGATTAGTTGGA+GGG + chr1_1:17343985-17344004 Msa0011490:intron 30.0%
TGTGATGTATATGCATGTAT+TGG - chr1_1:17344078-17344097 None:intergenic 30.0%
! TTAAGGTATGGACTAAGAAA+GGG - chr1_1:17344220-17344239 None:intergenic 30.0%
! ATTAAGGTATGGACTAAGAA+AGG - chr1_1:17344221-17344240 None:intergenic 30.0%
TACTGAATTCGAAGGTAAAA+TGG - chr1_1:17344340-17344359 None:intergenic 30.0%
ATTGAATGTACTGAATTCGA+AGG - chr1_1:17344348-17344367 None:intergenic 30.0%
TACCCAGAACAAAATTCATT+AGG + chr1_1:17344380-17344399 Msa0011490:CDS 30.0%
ACCCAGAACAAAATTCATTA+GGG + chr1_1:17344381-17344400 Msa0011490:CDS 30.0%
! TCCCTAATGAATTTTGTTCT+GGG - chr1_1:17344385-17344404 None:intergenic 30.0%
! ATCCCTAATGAATTTTGTTC+TGG - chr1_1:17344386-17344405 None:intergenic 30.0%
ACAAAATTCATTAGGGATCA+AGG + chr1_1:17344388-17344407 Msa0011490:CDS 30.0%
TCTCTCTCATTGATATCATT+CGG + chr1_1:17344438-17344457 Msa0011490:intron 30.0%
!!! CGGTGATTTTGAGTTTTATT+AGG + chr1_1:17344458-17344477 Msa0011490:intron 30.0%
ACCAATATCAAATGTGTACA+AGG - chr1_1:17334372-17334391 None:intergenic 30.0%
ATTGGTCAAAATGATCTTAC+TGG + chr1_1:17344595-17344614 Msa0011490:CDS 30.0%
! TCTCAATTGATGACACTTAT+TGG + chr1_1:17344796-17344815 Msa0011490:intron 30.0%
! ATCTAGAACATACACAGTTT+AGG + chr1_1:17344821-17344840 Msa0011490:intron 30.0%
! TCTAGAACATACACAGTTTA+GGG + chr1_1:17344822-17344841 Msa0011490:intron 30.0%
ATTAAAGGAAGACAACCAAT+TGG - chr1_1:17344878-17344897 None:intergenic 30.0%
!! TGGTTGTCTTCCTTTAATTT+TGG + chr1_1:17344880-17344899 Msa0011490:CDS 30.0%
TAACTATCCTTTATTGCAGA+TGG - chr1_1:17344914-17344933 None:intergenic 30.0%
TCTGCAATAAAGGATAGTTA+TGG + chr1_1:17344914-17344933 Msa0011490:CDS 30.0%
GTGCAAAATTACTAGAATCA+TGG - chr1_1:17345225-17345244 None:intergenic 30.0%
GTCCATCTACTAGAATAATA+TGG + chr1_1:17345436-17345455 Msa0011490:intron 30.0%
TCCCATATTATTCTAGTAGA+TGG - chr1_1:17345441-17345460 None:intergenic 30.0%
TCTACTAGAATAATATGGGA+TGG + chr1_1:17345441-17345460 Msa0011490:intron 30.0%
!! AAATATGTTTTTGCGCTTAG+TGG + chr1_1:17345683-17345702 Msa0011490:intron 30.0%
AAAGTTCACCTATATATTGG+TGG + chr1_1:17345814-17345833 Msa0011490:intron 30.0%
GTAGATGGTCCAAAAAATAA+TGG + chr1_1:17345965-17345984 Msa0011490:intron 30.0%
TTTGCAGATTTCACTTGATT+CGG + chr1_1:17346048-17346067 Msa0011490:intron 30.0%
TCTCCATAAGCTTACATTAT+AGG - chr1_1:17346122-17346141 None:intergenic 30.0%
!! AAACTTTGTTGGTGTTGTAA+CGG - chr1_1:17346332-17346351 None:intergenic 30.0%
CTAGATTGAAAGATGATTGA+TGG + chr1_1:17346475-17346494 Msa0011490:intron 30.0%
GTAAGAATCTGATCATTTAG+TGG - chr1_1:17346559-17346578 None:intergenic 30.0%
GACATTATAAAACTTCAGCA+TGG - chr1_1:17346680-17346699 None:intergenic 30.0%
ATAATGTCATATTTACGACG+AGG + chr1_1:17346692-17346711 Msa0011490:intron 30.0%
TAATGTCATATTTACGACGA+GGG + chr1_1:17346693-17346712 Msa0011490:intron 30.0%
ATAGAAACGTACATAACATG+TGG + chr1_1:17346817-17346836 Msa0011490:intron 30.0%
ACCATACAATGCTCAATTAT+CGG - chr1_1:17347131-17347150 None:intergenic 30.0%
CTTTGATTAAAGTGTGAAGA+TGG - chr1_1:17347176-17347195 None:intergenic 30.0%
CATCTTCACACTTTAATCAA+AGG + chr1_1:17347174-17347193 Msa0011490:intron 30.0%
! ATGACATGTCATGTTTTCAT+TGG + chr1_1:17347364-17347383 Msa0011490:intron 30.0%
ATAGAAACGTACATAACATG+TGG - chr1_1:17346817-17346836 None:intergenic 30.0%
GTTTCTATGCAAGTATTTCT+CGG + chr1_1:17347415-17347434 Msa0011490:intron 30.0%
!! TGTCTGAAATTTTGACAACA+AGG + chr1_1:17347483-17347502 Msa0011490:intron 30.0%
! TTATATTGGTTGAGATCCAT+TGG - chr1_1:17347602-17347621 None:intergenic 30.0%
!!! AAAGAACTCGTTTTTTACGA+TGG - chr1_1:17347695-17347714 None:intergenic 30.0%
! ACAATTTCAAGTAGATTCAG+TGG + chr1_1:17347716-17347735 Msa0011490:intron 30.0%
AGTTTAATGACAACCCTTAA+CGG + chr1_1:17347968-17347987 Msa0011490:intron 30.0%
! TGTTTGTATCTTTTATCACC+CGG + chr1_1:17348322-17348341 Msa0011490:intron 30.0%
GAGAACAAGAAATACTTTGA+GGG - chr1_1:17348348-17348367 None:intergenic 30.0%
TGAGAACAAGAAATACTTTG+AGG - chr1_1:17348349-17348368 None:intergenic 30.0%
! TGTTTGTATCTTTTATCACC+CGG + chr1_1:17348322-17348341 Msa0011490:intron 30.0%
! TTGATTCTTTTTACCTGTCT+CGG + chr1_1:17348499-17348518 Msa0011490:intron 30.0%
TATATACTATACTAAGGAGG+TGG - chr1_1:17348822-17348841 None:intergenic 30.0%
AATACAATCCTCAGAAAGAA+AGG + chr1_1:17349303-17349322 Msa0011490:intron 30.0%
!!! ATAGCTTTTCTGGTTTGAAT+GGG - chr1_1:17349490-17349509 None:intergenic 30.0%
!!! AATAGCTTTTCTGGTTTGAA+TGG - chr1_1:17349491-17349510 None:intergenic 30.0%
ACCAGAAAAGCTATTCTTTA+AGG + chr1_1:17349496-17349515 Msa0011490:intron 30.0%
! TCCTTAAAGAATAGCTTTTC+TGG - chr1_1:17349500-17349519 None:intergenic 30.0%
TGATGAATTCAAGAATGACA+TGG + chr1_1:17349549-17349568 Msa0011490:intron 30.0%
AATTTCATATATCTGCTGTG+AGG + chr1_1:17349748-17349767 Msa0011490:intron 30.0%
GTGCTTCATCATAAAATTCA+TGG + chr1_1:17349857-17349876 Msa0011490:intron 30.0%
TTCTTTGTAGCAAATATTGG+GGG - chr1_1:17349948-17349967 None:intergenic 30.0%
!!! TTTCCTGCCATTTTTAACTT+CGG + chr1_1:17349975-17349994 Msa0011490:CDS 30.0%
TTGAAAAAAGTCTCACCATA+TGG - chr1_1:17350056-17350075 None:intergenic 30.0%
CGAATCATTCTTGATTTCAT+AGG + chr1_1:17342030-17342049 Msa0011490:CDS 30.0%
!!! TATGACCAAGAATTTTGGTT+TGG + chr1_1:17350198-17350217 Msa0011490:intron 30.0%
GGATTCTCAAACAAAAGAAA+TGG - chr1_1:17350881-17350900 None:intergenic 30.0%
TTTAAGAAAATAGGGAGTGA+AGG - chr1_1:17351020-17351039 None:intergenic 30.0%
!! CGTGCGATTTTTAAGAAAAT+AGG - chr1_1:17351029-17351048 None:intergenic 30.0%
TTTCTTAAAAATCGCACGTT+CGG + chr1_1:17351031-17351050 Msa0011490:intron 30.0%
AAGAATTGTTAGACTTAACG+TGG - chr1_1:17351290-17351309 None:intergenic 30.0%
CAATAAAAAGAGCAGAAAGA+CGG + chr1_1:17351715-17351734 Msa0011490:intron 30.0%
AATAAAAAGAGCAGAAAGAC+GGG + chr1_1:17351716-17351735 Msa0011490:intron 30.0%
! GTTTTGTCGTATGAATATGA+AGG - chr1_1:17351783-17351802 None:intergenic 30.0%
TCCACAATTGTTATACAACT+TGG + chr1_1:17351931-17351950 Msa0011490:intron 30.0%
TCCAAGTTGTATAACAATTG+TGG - chr1_1:17351935-17351954 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG + chr1_1:17352690-17352709 Msa0011490:intron 30.0%
TAATATTTCTCCTCACTGAT+GGG - chr1_1:17353229-17353248 None:intergenic 30.0%
ATCAGTGAGGAGAAATATTA+GGG + chr1_1:17353229-17353248 Msa0011490:intron 30.0%
!!! GAGATGTGTTTTGATATTCA+GGG - chr1_1:17353894-17353913 None:intergenic 30.0%
!!! AGAGATGTGTTTTGATATTC+AGG - chr1_1:17353895-17353914 None:intergenic 30.0%
ATTTCATATGAATTTCAGGG+TGG - chr1_1:17353947-17353966 None:intergenic 30.0%
!! TGTTATTGGTTTGCATTCTT+TGG - chr1_1:17353988-17354007 None:intergenic 30.0%
CTATATAGTGTGATGTAGAT+GGG - chr1_1:17354013-17354032 None:intergenic 30.0%
TCAAGATATGGACTTAGATA+GGG - chr1_1:17354134-17354153 None:intergenic 30.0%
ATCAAGATATGGACTTAGAT+AGG - chr1_1:17354135-17354154 None:intergenic 30.0%
CTAGGTATGATATTACTAGT+AGG - chr1_1:17354221-17354240 None:intergenic 30.0%
ACTAGTAATATCATACCTAG+TGG + chr1_1:17354221-17354240 Msa0011490:CDS 30.0%
TACCTAAAACAAGGTTCATT+AGG + chr1_1:17354297-17354316 Msa0011490:CDS 30.0%
ACCTAAAACAAGGTTCATTA+GGG + chr1_1:17354298-17354317 Msa0011490:CDS 30.0%
TTTGTGTCCTTAATTAAGCT+CGG - chr1_1:17354388-17354407 None:intergenic 30.0%
ATCAAATGTGTATAAGGCTT+TGG - chr1_1:17354495-17354514 None:intergenic 30.0%
GCCTTATACACATTTGATAT+TGG + chr1_1:17354497-17354516 Msa0011490:CDS 30.0%
GTAGATAAAGTTAGCAGAAA+AGG - chr1_1:17354635-17354654 None:intergenic 30.0%
! TCATTTTGGATACATAACAC+TGG + chr1_1:17354814-17354833 Msa0011490:CDS 30.0%
! ATTAAAGGTACACATCCAAT+TGG - chr1_1:17354841-17354860 None:intergenic 30.0%
!! TGGATGTGTACCTTTAATTT+TGG + chr1_1:17354843-17354862 Msa0011490:CDS 30.0%
GGAAAATTGGCCAAAATTAA+AGG - chr1_1:17354856-17354875 None:intergenic 30.0%
CTTTATAGCAGATGGAAAAT+TGG - chr1_1:17354869-17354888 None:intergenic 30.0%
! CAATTTTCCATCTGCTATAA+AGG + chr1_1:17354867-17354886 Msa0011490:CDS 30.0%
TAACTATCCTTTATAGCAGA+TGG - chr1_1:17354877-17354896 None:intergenic 30.0%
TCTGCTATAAAGGATAGTTA+TGG + chr1_1:17354877-17354896 Msa0011490:CDS 30.0%
!!! CACCGTATTTTTTTGGATTT+TGG - chr1_1:17345075-17345094 None:intergenic 30.0%
GGGTATATATATTTGGATTG+CGG + chr1_1:17355090-17355109 Msa0011490:intron 30.0%
!! ATGTTGACTCGCTATAATTA+TGG + chr1_1:17355156-17355175 Msa0011490:intron 30.0%
TACAACTATAACATTAGTGC+TGG + chr1_1:17355277-17355296 Msa0011490:CDS 30.0%
TCCCATATTATTCTAGTAGA+TGG - chr1_1:17345441-17345460 None:intergenic 30.0%
TCTACTAGAATAATATGGGA+TGG + chr1_1:17345441-17345460 Msa0011490:intron 30.0%
!! ATTGCTACTTTCAATCACTG+TGG - chr1_1:17332672-17332691 None:intergenic 35.0%
AAATAAGTCTCTCCATATGG+TGG - chr1_1:17332782-17332801 None:intergenic 35.0%
!! CGTCTAATTGTCGATTTCAT+TGG + chr1_1:17332833-17332852 Msa0011490:CDS 35.0%
!! CTTTAAAGAGTGTCTTTAGC+AGG + chr1_1:17333207-17333226 Msa0011490:intron 35.0%
CTTTAGCAGGACATAATAGT+AGG + chr1_1:17333220-17333239 Msa0011490:intron 35.0%
TGAGCTAACTTCTTACTAAC+TGG - chr1_1:17333630-17333649 None:intergenic 35.0%
TACTCGTCAATGAAATTCAC+AGG - chr1_1:17333694-17333713 None:intergenic 35.0%
ATTCGGACCAAGAGTTAATT+TGG - chr1_1:17333895-17333914 None:intergenic 35.0%
CAAGATATGCGCTTAGATAA+GGG - chr1_1:17334025-17334044 None:intergenic 35.0%
TCAAGATATGCGCTTAGATA+AGG - chr1_1:17334026-17334045 None:intergenic 35.0%
AAGCGCATATCTTGATTCTT+TGG + chr1_1:17334031-17334050 Msa0011490:CDS 35.0%
AGCGCATATCTTGATTCTTT+GGG + chr1_1:17334032-17334051 Msa0011490:CDS 35.0%
GTTTGCACCATGTGAAAAAT+TGG - chr1_1:17334060-17334079 None:intergenic 35.0%
TATTGGACATCAAGGTAGAA+AGG - chr1_1:17334146-17334165 None:intergenic 35.0%
ATTGAGTGTATTGGACATCA+AGG - chr1_1:17334154-17334173 None:intergenic 35.0%
GGTCCTTAATAATGAAGACA+TGG + chr1_1:17334264-17334283 Msa0011490:intron 35.0%
!!! TACACCCCACTTATTTTGTA+TGG + chr1_1:17334701-17334720 Msa0011490:intron 35.0%
GAGCAAAATCAAAAGTGAGA+TGG + chr1_1:17334940-17334959 Msa0011490:intron 35.0%
! GGGCAATTTTCGTTTTGTAT+TGG + chr1_1:17334961-17334980 Msa0011490:intron 35.0%
ATATAGCAAGTTACACCATG+TGG - chr1_1:17335028-17335047 None:intergenic 35.0%
ATACACCCCTAAAAAACAAG+TGG + chr1_1:17335046-17335065 Msa0011490:intron 35.0%
TACACCCCTAAAAAACAAGT+GGG + chr1_1:17335047-17335066 Msa0011490:intron 35.0%
! TTTGATGAACTTGGTGATTC+AGG + chr1_1:17335110-17335129 Msa0011490:intron 35.0%
! ATTTGGGTGCTAGATCATTT+TGG + chr1_1:17335142-17335161 Msa0011490:intron 35.0%
! TCATTTTGGATACACAACAC+AGG + chr1_1:17335156-17335175 Msa0011490:intron 35.0%
ACATATGTGATTGCAGCTAA+AGG - chr1_1:17335327-17335346 None:intergenic 35.0%
ATAGCCACAACAAACAACTA+GGG - chr1_1:17335542-17335561 None:intergenic 35.0%
! TATAGCAATAGTGTTGGATG+TGG + chr1_1:17335577-17335596 Msa0011490:CDS 35.0%
AAGCTCCAGTAGAAATTTCA+TGG - chr1_1:17335717-17335736 None:intergenic 35.0%
CCAATGTATTTCTTGTGAGA+TGG - chr1_1:17335875-17335894 None:intergenic 35.0%
CCATCTCACAAGAAATACAT+TGG + chr1_1:17335872-17335891 Msa0011490:intron 35.0%
! GAAATTGGCATCGAAATCAT+AGG - chr1_1:17335903-17335922 None:intergenic 35.0%
! TTGGATTTTGTATACTTCCC+TGG - chr1_1:17336752-17336771 None:intergenic 35.0%
!! CTTGATGATGTTAGGTCTAA+TGG + chr1_1:17336794-17336813 Msa0011490:intron 35.0%
ATGATGTTAGGTCTAATGGT+TGG + chr1_1:17336798-17336817 Msa0011490:intron 35.0%
!! TTAAGTACCGATTTCTTCCT+TGG - chr1_1:17336851-17336870 None:intergenic 35.0%
TCCCTATACTAAATTGGCAA+GGG - chr1_1:17337751-17337770 None:intergenic 35.0%
TTCCCTATACTAAATTGGCA+AGG - chr1_1:17337752-17337771 None:intergenic 35.0%
! ATATGCATTGATACGTGTGT+CGG + chr1_1:17338031-17338050 Msa0011490:intron 35.0%
TCAACTAGGTCATCTATTGA+GGG + chr1_1:17338056-17338075 Msa0011490:intron 35.0%
TAGGACACGAGTAAATGATA+GGG - chr1_1:17338137-17338156 None:intergenic 35.0%
ATAGGACACGAGTAAATGAT+AGG - chr1_1:17338138-17338157 None:intergenic 35.0%
AATTGCAGGGATACTATGAA+CGG + chr1_1:17338328-17338347 Msa0011490:intron 35.0%
!! TAGGAGTGTTTATGATGTCA+TGG - chr1_1:17338364-17338383 None:intergenic 35.0%
CTGTAGTTATAGTCTATGAC+AGG - chr1_1:17338486-17338505 None:intergenic 35.0%
TATCTAAGTGATGAGTCTGT+GGG - chr1_1:17338613-17338632 None:intergenic 35.0%
! TACTTTTCTGCAACCAAAAC+AGG + chr1_1:17338719-17338738 Msa0011490:intron 35.0%
! ACAGAACAAGTTACCTGTTT+TGG - chr1_1:17338735-17338754 None:intergenic 35.0%
TTACTTTCATACCTGATGGT+CGG - chr1_1:17338923-17338942 None:intergenic 35.0%
! TTGGGTTTTCCTTTGATACA+TGG + chr1_1:17339049-17339068 Msa0011490:intron 35.0%
TCTTAGTAACCAATTTGGGT+AGG - chr1_1:17339119-17339138 None:intergenic 35.0%
ACACATGTTGTAGTCAAAAG+TGG + chr1_1:17339229-17339248 Msa0011490:intron 35.0%
GTTACTTCCCCTAAGAAATT+TGG + chr1_1:17339273-17339292 Msa0011490:intron 35.0%
CTCTTCTTAGGAAGTTAGTT+TGG + chr1_1:17339334-17339353 Msa0011490:intron 35.0%
TCTCACAAGTACATAAAAGG+TGG + chr1_1:17339399-17339418 Msa0011490:intron 35.0%
ACATAAAAGGTGGCGAAATT+TGG + chr1_1:17339409-17339428 Msa0011490:intron 35.0%
! AAATTGAAAGCCTTGTCTCA+AGG - chr1_1:17339493-17339512 None:intergenic 35.0%
! TTTTCATTGGATCATGGGAT+TGG + chr1_1:17339875-17339894 Msa0011490:intron 35.0%
! ATATTCAGGATAGATGGGTT+TGG + chr1_1:17339976-17339995 Msa0011490:intron 35.0%
! TATTCAGGATAGATGGGTTT+GGG + chr1_1:17339977-17339996 Msa0011490:intron 35.0%
CCAAAGAAAATGTTGCACAT+TGG - chr1_1:17340097-17340116 None:intergenic 35.0%
! CCAATGTGCAACATTTTCTT+TGG + chr1_1:17340094-17340113 Msa0011490:intron 35.0%
TCTCATATCTGACAACGATA+TGG + chr1_1:17340175-17340194 Msa0011490:intron 35.0%
AAGATGAGCTTTACTGTCTT+AGG + chr1_1:17340209-17340228 Msa0011490:intron 35.0%
AGATGAGCTTTACTGTCTTA+GGG + chr1_1:17340210-17340229 Msa0011490:intron 35.0%
GTTGTGAAGCTGAAGAAATA+TGG - chr1_1:17340286-17340305 None:intergenic 35.0%
! ACTATGTTTACATGGCCTTT+TGG + chr1_1:17340325-17340344 Msa0011490:intron 35.0%
! CAATAACTATTTGGTGGATC+TGG + chr1_1:17340359-17340378 Msa0011490:intron 35.0%
TAATGCATCATTCTTGAGGT+GGG - chr1_1:17340531-17340550 None:intergenic 35.0%
TTAATGCATCATTCTTGAGG+TGG - chr1_1:17340532-17340551 None:intergenic 35.0%
AACAAGGGAGATTGAATTGT+TGG + chr1_1:17340614-17340633 Msa0011490:intron 35.0%
GTTTATTGCTGAGCTATTTG+AGG + chr1_1:17340667-17340686 Msa0011490:intron 35.0%
TGATTACCAACATCAAACCA+TGG - chr1_1:17340697-17340716 None:intergenic 35.0%
TTGTTTAACCAATGCTCATG+GGG - chr1_1:17340848-17340867 None:intergenic 35.0%
GTTGTTTAACCAATGCTCAT+GGG - chr1_1:17340849-17340868 None:intergenic 35.0%
! TACTTATAATTTGGGACCGA+GGG - chr1_1:17340906-17340925 None:intergenic 35.0%
! TTACTTATAATTTGGGACCG+AGG - chr1_1:17340907-17340926 None:intergenic 35.0%
TCCAAAGCGACATACAATTT+GGG - chr1_1:17341145-17341164 None:intergenic 35.0%
TTCCAAAGCGACATACAATT+TGG - chr1_1:17341146-17341165 None:intergenic 35.0%
! ATCATACAATTTGGGACAGA+GGG + chr1_1:17341390-17341409 Msa0011490:intron 35.0%
ATGATGCACAAATGAACCAA+TGG - chr1_1:17341772-17341791 None:intergenic 35.0%
GTGCATCATCATGAAATTCA+TGG + chr1_1:17341783-17341802 Msa0011490:intron 35.0%
! TGTCCTGCCATATTTAACTT+TGG + chr1_1:17341901-17341920 Msa0011490:CDS 35.0%
!! GGAAGCACCAAAGTTAAATA+TGG - chr1_1:17341911-17341930 None:intergenic 35.0%
TTGAAAAAAGTCTCTCCGTT+TGG - chr1_1:17341982-17342001 None:intergenic 35.0%
! TCAACTGGAAGATTTTGTGA+TGG + chr1_1:17342006-17342025 Msa0011490:CDS 35.0%
TAATTGCCTAATGCTCTGTT+TGG + chr1_1:17342277-17342296 Msa0011490:intron 35.0%
! AAACTTCCAAACAGAGCATT+AGG - chr1_1:17342286-17342305 None:intergenic 35.0%
TAATGCTCTGTTTGGAAGTT+TGG + chr1_1:17342285-17342304 Msa0011490:intron 35.0%
TTTGGGAAAGGAAGACTTTA+AGG + chr1_1:17342374-17342393 Msa0011490:intron 35.0%
TTGGGAAAGGAAGACTTTAA+GGG + chr1_1:17342375-17342394 Msa0011490:intron 35.0%
!! GAATATATAGAGGTAATGGG+AGG + chr1_1:17343176-17343195 Msa0011490:intron 35.0%
AAAGTGGTGTTTATATGCCT+TGG + chr1_1:17343253-17343272 Msa0011490:intron 35.0%
TGTTTATATGCCTTGGAAGT+GGG + chr1_1:17343260-17343279 Msa0011490:intron 35.0%
TCAAAGTTGTAGTAATGGCT+GGG - chr1_1:17343358-17343377 None:intergenic 35.0%
AAAAGCTCACGAAAATCTAC+AGG - chr1_1:17343409-17343428 None:intergenic 35.0%
! ATTTTCGTGAGCTTTTCCTA+TGG + chr1_1:17343413-17343432 Msa0011490:intron 35.0%
TATATGTGACCCACATAGTT+TGG + chr1_1:17343809-17343828 Msa0011490:intron 35.0%
TCAAGTGAACCAAACTATGT+GGG - chr1_1:17343821-17343840 None:intergenic 35.0%
TTCAAGTGAACCAAACTATG+TGG - chr1_1:17343822-17343841 None:intergenic 35.0%
! ACATAGTTTGGTTCACTTGA+AGG + chr1_1:17343821-17343840 Msa0011490:intron 35.0%
!!! GTTTTGGAGGGAAAATTTGT+AGG + chr1_1:17344017-17344036 Msa0011490:intron 35.0%
AGTCCATACCTTAATTCTCT+AGG + chr1_1:17344226-17344245 Msa0011490:CDS 35.0%
!! AATGGACTGAACATTCCATT+AGG - chr1_1:17344322-17344341 None:intergenic 35.0%
! TTTTCAAATATATGGCCAGG+AGG + chr1_1:17344511-17344530 Msa0011490:intron 35.0%
TTTCAAATATATGGCCAGGA+GGG + chr1_1:17344512-17344531 Msa0011490:intron 35.0%
ATCAAATGTGTACAAGGCTT+TGG - chr1_1:17344575-17344594 None:intergenic 35.0%
GCCTTGTACACATTTGATAT+TGG + chr1_1:17344577-17344596 Msa0011490:CDS 35.0%
!!! GATCTTACTGGTGGTTTTTT+TGG + chr1_1:17344607-17344626 Msa0011490:CDS 35.0%
TATTGAAGATGGGTGTTCAA+TGG - chr1_1:17344742-17344761 None:intergenic 35.0%
CTAGAACATACACAGTTTAG+GGG + chr1_1:17344823-17344842 Msa0011490:intron 35.0%
! TCATTTTGGATACACAACAC+AGG + chr1_1:17335156-17335175 Msa0011490:intron 35.0%
! CATTTTGGATACACAACACA+GGG + chr1_1:17335157-17335176 Msa0011490:intron 35.0%
!!! TTTGGCTCACCGTATTTTTT+TGG - chr1_1:17345082-17345101 None:intergenic 35.0%
GTCTTTGATCAAATCTCTAC+TGG + chr1_1:17345495-17345514 Msa0011490:intron 35.0%
! AGGTGTTTGAAGCAAAAATG+TGG - chr1_1:17345744-17345763 None:intergenic 35.0%
ATCTTAGAATAGCAGCTGAA+AGG + chr1_1:17345876-17345895 Msa0011490:intron 35.0%
! ATAGGTATCGTTATTAGAGG+AGG - chr1_1:17345915-17345934 None:intergenic 35.0%
TACCAGTAGCATTTGAACTT+TGG + chr1_1:17346085-17346104 Msa0011490:intron 35.0%
AAATGTTTGCGAAACACACA+CGG + chr1_1:17346268-17346287 Msa0011490:intron 35.0%
!! CACGACTTCTTTAAAGTCAT+TGG + chr1_1:17346300-17346319 Msa0011490:intron 35.0%
!! AACTTTGTTGGTGTTGTAAC+GGG - chr1_1:17346331-17346350 None:intergenic 35.0%
AGACAATAATAGAGCCCATT+GGG - chr1_1:17346423-17346442 None:intergenic 35.0%
AAGACAATAATAGAGCCCAT+TGG - chr1_1:17346424-17346443 None:intergenic 35.0%
TGAAAAAGGAAATTGACGAG+AGG + chr1_1:17346752-17346771 Msa0011490:intron 35.0%
TGGCATTTACAAACATCCAA+TGG + chr1_1:17346837-17346856 Msa0011490:intron 35.0%
ATGACATGTCATGTTTCCAT+TGG - chr1_1:17346856-17346875 None:intergenic 35.0%
! TCCGATAATTGAGCATTGTA+TGG + chr1_1:17347127-17347146 Msa0011490:intron 35.0%
TCTCTTCTCTTTCCTTAAAC+CGG - chr1_1:17347286-17347305 None:intergenic 35.0%
CTTTATAATGGCACCATTAG+AGG + chr1_1:17347864-17347883 Msa0011490:intron 35.0%
!!! TTCACCCAAAGGTATTTTGT+TGG - chr1_1:17347923-17347942 None:intergenic 35.0%
ATACATGGTTTGACCGTTAA+GGG - chr1_1:17347984-17348003 None:intergenic 35.0%
! GTTAGAAGTACATCCATACA+TGG - chr1_1:17347999-17348018 None:intergenic 35.0%
AGAGTCACACTCAATATTAG+AGG - chr1_1:17348047-17348066 None:intergenic 35.0%
CTTATTGTGTTCATGTAGCT+TGG + chr1_1:17348125-17348144 Msa0011490:intron 35.0%
!! AGTAGGTGTGTTTGTTGTTT+AGG + chr1_1:17348593-17348612 Msa0011490:intron 35.0%
! ACATCTTTTGTAAGTACCAC+TGG + chr1_1:17348638-17348657 Msa0011490:intron 35.0%
CTAATATGATTAGGTACCAG+TGG - chr1_1:17348657-17348676 None:intergenic 35.0%
!! TGAAGCACCGAAGTTAAAAA+TGG - chr1_1:17349985-17350004 None:intergenic 35.0%
AAAGTCTCACCATATGGTAA+CGG - chr1_1:17350050-17350069 None:intergenic 35.0%
! TCATCTGGAAGATTTTCTGA+TGG + chr1_1:17350080-17350099 Msa0011490:CDS 35.0%
ATCTAAGAGAAACACTTGTG+TGG + chr1_1:17350173-17350192 Msa0011490:intron 35.0%
! TGGACTATGACCAAGAATTT+TGG + chr1_1:17350193-17350212 Msa0011490:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr1_1:17350318-17350337 None:intergenic 35.0%
TGTGACCAAACCAAAATTCT+TGG + chr1_1:17350318-17350337 Msa0011490:intron 35.0%
!!! CAAGACCAAGAATTTTGGTT+TGG - chr1_1:17350326-17350345 None:intergenic 35.0%
CAAACCAAAATTCTTGGTCT+TGG + chr1_1:17350324-17350343 Msa0011490:intron 35.0%
GATATGGAGAAAATCTTGTG+CGG - chr1_1:17350351-17350370 None:intergenic 35.0%
!! TGTTGAACACTTTTGGAAAG+TGG + chr1_1:17350384-17350403 Msa0011490:intron 35.0%
TCTAAATCTGATCATCTCCA+CGG - chr1_1:17350503-17350522 None:intergenic 35.0%
TACATGAGTTAACTCACACT+GGG - chr1_1:17350705-17350724 None:intergenic 35.0%
TTACATGAGTTAACTCACAC+TGG - chr1_1:17350706-17350725 None:intergenic 35.0%
! TAGGAGCGAACAATTTTTGT+TGG + chr1_1:17350840-17350859 Msa0011490:intron 35.0%
! AGGAGCGAACAATTTTTGTT+GGG + chr1_1:17350841-17350860 Msa0011490:intron 35.0%
GACTTGAATCTCATACAACT+TGG - chr1_1:17351832-17351851 None:intergenic 35.0%
!!! GTGTCATCATTTTTTCACGT+TGG + chr1_1:17351087-17351106 Msa0011490:intron 35.0%
AACCCAAAAATGTGCTGAAA+GGG - chr1_1:17351356-17351375 None:intergenic 35.0%
TGTACTACTAGCGAAAAGAT+GGG - chr1_1:17351751-17351770 None:intergenic 35.0%
ATGTACTACTAGCGAAAAGA+TGG - chr1_1:17351752-17351771 None:intergenic 35.0%
ACCAGTGAGGAGAAATATTA+GGG - chr1_1:17352512-17352531 None:intergenic 35.0%
TATACAAACGATGACACAAC+AGG - chr1_1:17353189-17353208 None:intergenic 35.0%
!!! TATTTTTTTTTGTGGTGGCC+GGG - chr1_1:17352730-17352749 None:intergenic 35.0%
!!! GTATTTTTTTTTGTGGTGGC+CGG - chr1_1:17352731-17352750 None:intergenic 35.0%
TATATATAGCCGAGTTTGCA+TGG - chr1_1:17353056-17353075 None:intergenic 35.0%
AACCAAGAAAACACGGTTTA+GGG - chr1_1:17353028-17353047 None:intergenic 35.0%
TAACCAAGAAAACACGGTTT+AGG - chr1_1:17353027-17353046 None:intergenic 35.0%
AAACAACTAGATTAGAGACC+CGG - chr1_1:17352998-17353017 None:intergenic 35.0%
TAACCAAGAAAACACGGTTT+AGG + chr1_1:17353027-17353046 Msa0011490:intron 35.0%
AACCAAGAAAACACGGTTTA+GGG + chr1_1:17353028-17353047 Msa0011490:intron 35.0%
TATATATAGCCGAGTTTGCA+TGG + chr1_1:17353056-17353075 Msa0011490:intron 35.0%
AAACGATGACACAACATGAT+AGG + chr1_1:17353194-17353213 Msa0011490:intron 35.0%
CTAATATTTCTCCTCACTGA+TGG - chr1_1:17353230-17353249 None:intergenic 35.0%
CATCAGTGAGGAGAAATATT+AGG + chr1_1:17353228-17353247 Msa0011490:intron 35.0%
!! TAGGGATTGCTGTATTTTAG+AGG + chr1_1:17353247-17353266 Msa0011490:intron 35.0%
!! AGGGATTGCTGTATTTTAGA+GGG + chr1_1:17353248-17353267 Msa0011490:intron 35.0%
!!! ATGTGTTTTGATATTCAGGG+TGG - chr1_1:17353891-17353910 None:intergenic 35.0%
CAAAACACATCTCTCTATGT+CGG + chr1_1:17353901-17353920 Msa0011490:intron 35.0%
!! GATGTAGATGGGTTTGTTAT+TGG - chr1_1:17354002-17354021 None:intergenic 35.0%
CCTATATAGTGTGATGTAGA+TGG - chr1_1:17354014-17354033 None:intergenic 35.0%
CCATCTACATCACACTATAT+AGG + chr1_1:17354011-17354030 Msa0011490:intron 35.0%
AGTCCATATCTTGATTCTCT+TGG + chr1_1:17354140-17354159 Msa0011490:CDS 35.0%
GTCCATATCTTGATTCTCTT+GGG + chr1_1:17354141-17354160 Msa0011490:CDS 35.0%
!! AATGGACTAAACATTCCACT+AGG - chr1_1:17354239-17354258 None:intergenic 35.0%
TTGAATGTACTGAACCTGAA+GGG - chr1_1:17354264-17354283 None:intergenic 35.0%
ATTGAATGTACTGAACCTGA+AGG - chr1_1:17354265-17354284 None:intergenic 35.0%
!!! TCCCTAATGAACCTTGTTTT+AGG - chr1_1:17354302-17354321 None:intergenic 35.0%
TGTGATTCCGAGCTTAATTA+AGG + chr1_1:17354378-17354397 Msa0011490:intron 35.0%
TTCAAAATTTACTTGCCAGG+AGG + chr1_1:17354431-17354450 Msa0011490:intron 35.0%
!!! GATCTTACTGCTGGATTTTT+TGG + chr1_1:17354527-17354546 Msa0011490:CDS 35.0%
ACATATACAATTTAGGGGCA+AGG + chr1_1:17354791-17354810 Msa0011490:CDS 35.0%
ATACATAACACTGGACCAAT+TGG + chr1_1:17354823-17354842 Msa0011490:CDS 35.0%
!!! TTTTGGAAAAGAGAGTGCTT+TGG - chr1_1:17355021-17355040 None:intergenic 35.0%
!!! TTTGGCTCACCGTATTTTTT+TGG - chr1_1:17345082-17345101 None:intergenic 35.0%
GGAGCAACCATAAACATAAA+TGG + chr1_1:17355304-17355323 Msa0011490:CDS 35.0%
AAATGGTACAAACACTGTTG+TGG + chr1_1:17355321-17355340 Msa0011490:CDS 35.0%
AATGGTACAAACACTGTTGT+GGG + chr1_1:17355322-17355341 Msa0011490:CDS 35.0%
GTCTTTGATCAAATCTCTAC+TGG + chr1_1:17345495-17345514 Msa0011490:intron 35.0%
TTCCCTGCAATCTTCAACTT+TGG + chr1_1:17332704-17332723 Msa0011490:CDS 40.0%
CACCAAAGTTGAAGATTGCA+GGG - chr1_1:17332709-17332728 None:intergenic 40.0%
TCACCAAAGTTGAAGATTGC+AGG - chr1_1:17332710-17332729 None:intergenic 40.0%
ATTTCTACAGACCTAATGGG+AGG + chr1_1:17332798-17332817 Msa0011490:CDS 40.0%
AGACTTAGGAGAGTTGTTAG+AGG - chr1_1:17333763-17333782 None:intergenic 40.0%
GCGCATATCTTGATTCTTTG+GGG + chr1_1:17334033-17334052 Msa0011490:CDS 40.0%
! TTGGGGACCAATTTTTCACA+TGG + chr1_1:17334050-17334069 Msa0011490:CDS 40.0%
! TGAGGTATAATACTTGGTGG+GGG - chr1_1:17334110-17334129 None:intergenic 40.0%
! CTGAGGTATAATACTTGGTG+GGG - chr1_1:17334111-17334130 None:intergenic 40.0%
CCTGAGGTATAATACTTGGT+GGG - chr1_1:17334112-17334131 None:intergenic 40.0%
CCACCAAGTATTATACCTCA+GGG + chr1_1:17334110-17334129 Msa0011490:CDS 40.0%
ACACCCCTAAAAAACAAGTG+GGG + chr1_1:17335048-17335067 Msa0011490:intron 40.0%
!!! TACGCCCCACTTGTTTTTTA+GGG - chr1_1:17335055-17335074 None:intergenic 40.0%
!!! TTACGCCCCACTTGTTTTTT+AGG - chr1_1:17335056-17335075 None:intergenic 40.0%
TAGCCACAACAAACAACTAG+GGG - chr1_1:17335541-17335560 None:intergenic 40.0%
CATAGCCACAACAAACAACT+AGG - chr1_1:17335543-17335562 None:intergenic 40.0%
!! CTAGTTGTTTGTTGTGGCTA+TGG + chr1_1:17335541-17335560 Msa0011490:CDS 40.0%
TTGAGTACCATTGACCTCTA+TGG - chr1_1:17335608-17335627 None:intergenic 40.0%
ACCATCTGCAAGAGTGAATT+GGG + chr1_1:17335651-17335670 Msa0011490:CDS 40.0%
TCCATCCATTCCCTTGAATA+TGG + chr1_1:17335744-17335763 Msa0011490:intron 40.0%
CGACTCAACTCGATAAGAAT+TGG + chr1_1:17336235-17336254 Msa0011490:intron 40.0%
TTGGACATCGTTCTGCTAAT+TGG - chr1_1:17336644-17336663 None:intergenic 40.0%
! AGATAGCGGTGAATCTTGTT+GGG - chr1_1:17336729-17336748 None:intergenic 40.0%
!! TGGGAAGTCTTGATGATGTT+AGG + chr1_1:17336786-17336805 Msa0011490:intron 40.0%
TGTTAGGTCTAATGGTTGGT+TGG + chr1_1:17336802-17336821 Msa0011490:intron 40.0%
! GTTAGGTCTAATGGTTGGTT+GGG + chr1_1:17336803-17336822 Msa0011490:intron 40.0%
AATCGGTACTTAAAGAACGG+TGG + chr1_1:17336858-17336877 Msa0011490:intron 40.0%
TACGTGACTTAAGTCACGTT+CGG - chr1_1:17336906-17336925 None:intergenic 40.0%
!! AGCATTTTGGGAAGTTAAGG+TGG + chr1_1:17336991-17337010 Msa0011490:intron 40.0%
!! GCATTTTGGGAAGTTAAGGT+GGG + chr1_1:17336992-17337011 Msa0011490:intron 40.0%
! TATGTAGGGTTGGCAATGAT+CGG - chr1_1:17337622-17337641 None:intergenic 40.0%
ATCATTGCCAACCCTACATA+TGG + chr1_1:17337622-17337641 Msa0011490:intron 40.0%
TCATTGCCAACCCTACATAT+GGG + chr1_1:17337623-17337642 Msa0011490:intron 40.0%
AAAAGTGGTGCCCATATGTA+GGG - chr1_1:17337636-17337655 None:intergenic 40.0%
CACGACAGAAAGAAGAAAAG+TGG - chr1_1:17337651-17337670 None:intergenic 40.0%
CCCTATACTAAATTGGCAAG+GGG - chr1_1:17337750-17337769 None:intergenic 40.0%
CCCCTTGCCAATTTAGTATA+GGG + chr1_1:17337747-17337766 Msa0011490:intron 40.0%
GTCAACTAGGTCATCTATTG+AGG + chr1_1:17338055-17338074 Msa0011490:intron 40.0%
ACACGAGTAAATGATAGGGT+GGG - chr1_1:17338133-17338152 None:intergenic 40.0%
CCTCGAAAATACCCTATGTT+CGG + chr1_1:17338167-17338186 Msa0011490:intron 40.0%
!! GACTCTGAAATCCGAACATA+GGG - chr1_1:17338181-17338200 None:intergenic 40.0%
TTCGAAAGAAAGCGAACCAA+TGG + chr1_1:17338236-17338255 Msa0011490:intron 40.0%
TTTATGTGGCGATTCTATGG+CGG - chr1_1:17338299-17338318 None:intergenic 40.0%
CAGTTTATGTGGCGATTCTA+TGG - chr1_1:17338302-17338321 None:intergenic 40.0%
TTCCATGCATTGAGAGAGTA+AGG + chr1_1:17338520-17338539 Msa0011490:intron 40.0%
AGGATCACCGTACAATCATA+AGG + chr1_1:17338554-17338573 Msa0011490:intron 40.0%
TACAACTTGACGAACCGATT+AGG + chr1_1:17338577-17338596 Msa0011490:intron 40.0%
ATCTAAGTGATGAGTCTGTG+GGG - chr1_1:17338612-17338631 None:intergenic 40.0%
CTATCTAAGTGATGAGTCTG+TGG - chr1_1:17338614-17338633 None:intergenic 40.0%
GGTTGCAGAAAAGTAAGTAG+CGG - chr1_1:17338714-17338733 None:intergenic 40.0%
!! AGTAGAGTATCGTATCCAGA+GGG - chr1_1:17338857-17338876 None:intergenic 40.0%
!! AAGTAGAGTATCGTATCCAG+AGG - chr1_1:17338858-17338877 None:intergenic 40.0%
AATCTCCTCTATCATCTTCG+TGG + chr1_1:17339010-17339029 Msa0011490:intron 40.0%
TATCATCTTCGTGGCCAATT+TGG + chr1_1:17339019-17339038 Msa0011490:intron 40.0%
ATCATCTTCGTGGCCAATTT+GGG + chr1_1:17339020-17339039 Msa0011490:intron 40.0%
GTAGTTCGACCATGTATCAA+AGG - chr1_1:17339061-17339080 None:intergenic 40.0%
ACTTCCCCTAAGAAATTTGG+AGG + chr1_1:17339276-17339295 Msa0011490:intron 40.0%
AGAGGCCTCCAAATTTCTTA+GGG - chr1_1:17339284-17339303 None:intergenic 40.0%
ATTTGGAGGCCTCTCTATTA+AGG + chr1_1:17339290-17339309 Msa0011490:intron 40.0%
! GTCTAGCTTCCTTAATAGAG+AGG - chr1_1:17339302-17339321 None:intergenic 40.0%
ATCCTCATAAACTTTGGGTG+AGG + chr1_1:17339370-17339389 Msa0011490:intron 40.0%
TCCTCATAAACTTTGGGTGA+GGG + chr1_1:17339371-17339390 Msa0011490:intron 40.0%
CAAGGCTTTCAATTTCGCAT+CGG + chr1_1:17339498-17339517 Msa0011490:intron 40.0%
! TTTCAATTTCGCATCGGTGA+TGG + chr1_1:17339504-17339523 Msa0011490:intron 40.0%
! TTCAATTTCGCATCGGTGAT+GGG + chr1_1:17339505-17339524 Msa0011490:intron 40.0%
GACACTTAAAAAGGAACGGA+GGG - chr1_1:17339832-17339851 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG - chr1_1:17339831-17339850 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG + chr1_1:17339831-17339850 Msa0011490:intron 40.0%
AACGGAGGTAGTACAACTTA+AGG + chr1_1:17339846-17339865 Msa0011490:intron 40.0%
GCAATCATGCTAAGCTCATT+TGG - chr1_1:17339922-17339941 None:intergenic 40.0%
CTTATCAGTTCCCCTTACTT+TGG + chr1_1:17339941-17339960 Msa0011490:intron 40.0%
AACATCAGAGGCCAAAGTAA+GGG - chr1_1:17339955-17339974 None:intergenic 40.0%
TAACATCAGAGGCCAAAGTA+AGG - chr1_1:17339956-17339975 None:intergenic 40.0%
GGCCTCTGATGTTAATATTC+AGG + chr1_1:17339962-17339981 Msa0011490:intron 40.0%
! ATTCAGGATAGATGGGTTTG+GGG + chr1_1:17339978-17339997 Msa0011490:intron 40.0%
ATGCTCCATCGAAGAAAGTT+TGG + chr1_1:17340236-17340255 Msa0011490:intron 40.0%
TGTTGCCAAACTTTCTTCGA+TGG - chr1_1:17340244-17340263 None:intergenic 40.0%
GCTTCACAACCTTGAAAACA+TGG + chr1_1:17340296-17340315 Msa0011490:intron 40.0%
AATGCATCATTCTTGAGGTG+GGG - chr1_1:17340530-17340549 None:intergenic 40.0%
GGTATACTTCGTGACAACAA+GGG + chr1_1:17340599-17340618 Msa0011490:intron 40.0%
! ATTTTCTTCTAATGAGGGGC+AGG + chr1_1:17340637-17340656 Msa0011490:intron 40.0%
! TTTTCTTCTAATGAGGGGCA+GGG + chr1_1:17340638-17340657 Msa0011490:intron 40.0%
! GAGCTATTTGAGGTTTACCA+TGG + chr1_1:17340677-17340696 Msa0011490:intron 40.0%
GGTTTACCATGGTTTGATGT+TGG + chr1_1:17340688-17340707 Msa0011490:intron 40.0%
GGTTGTTTAACCAATGCTCA+TGG - chr1_1:17340850-17340869 None:intergenic 40.0%
AAGCGACATACAATTTGGGA+CGG - chr1_1:17341141-17341160 None:intergenic 40.0%
! TCCCAAATTGTATGTCGCTT+TGG + chr1_1:17341141-17341160 Msa0011490:intron 40.0%
TTGTGTGGGAAACTTTGTGT+GGG - chr1_1:17341330-17341349 None:intergenic 40.0%
TTTGTGTGGGAAACTTTGTG+TGG - chr1_1:17341331-17341350 None:intergenic 40.0%
! CATCATACAATTTGGGACAG+AGG + chr1_1:17341389-17341408 Msa0011490:intron 40.0%
ATGGCACGGCTATAAAATCA+AGG + chr1_1:17341713-17341732 Msa0011490:intron 40.0%
AGCACAATCAAAGACACAAG+TGG - chr1_1:17341835-17341854 None:intergenic 40.0%
GCACCAAAGTTAAATATGGC+AGG - chr1_1:17341907-17341926 None:intergenic 40.0%
TGGGAAAGGAAGACTTTAAG+GGG + chr1_1:17342376-17342395 Msa0011490:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG + chr1_1:17342449-17342468 Msa0011490:intron 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG + chr1_1:17342450-17342469 Msa0011490:intron 40.0%
AACGCATATGATTGAGTGTG+AGG + chr1_1:17343026-17343045 Msa0011490:intron 40.0%
GTAAGTGGATGGAGTTTAGA+GGG + chr1_1:17343199-17343218 Msa0011490:intron 40.0%
ACCAAAGTGGGAAGTTAAAG+TGG + chr1_1:17343237-17343256 Msa0011490:intron 40.0%
! ACCACTTTAACTTCCCACTT+TGG - chr1_1:17343241-17343260 None:intergenic 40.0%
GTGTTTATATGCCTTGGAAG+TGG + chr1_1:17343259-17343278 Msa0011490:intron 40.0%
CTCAAAGTTGTAGTAATGGC+TGG - chr1_1:17343359-17343378 None:intergenic 40.0%
! ACAACTTTGAGCTTTTCCTG+CGG + chr1_1:17343368-17343387 Msa0011490:intron 40.0%
! AGCTTTTCCTGCGGATTTTT+GGG + chr1_1:17343377-17343396 Msa0011490:intron 40.0%
TGCAGGAAATGTGTTTCCAT+AGG - chr1_1:17343432-17343451 None:intergenic 40.0%
! ATTTCCTGCAGATTTTGCCA+AGG + chr1_1:17343442-17343461 Msa0011490:intron 40.0%
AAATCCTTGGCAAAATCTGC+AGG - chr1_1:17343449-17343468 None:intergenic 40.0%
! GCAGATTTTGCCAAGGATTT+AGG + chr1_1:17343449-17343468 Msa0011490:intron 40.0%
ATCCTAGTATTACCTCACCT+GGG - chr1_1:17343477-17343496 None:intergenic 40.0%
AATCCTAGTATTACCTCACC+TGG - chr1_1:17343478-17343497 None:intergenic 40.0%
! GTAATACTAGGATTTTGCCC+AGG + chr1_1:17343484-17343503 Msa0011490:intron 40.0%
TAAATTGGGTTAATGTGGGG+TGG + chr1_1:17343657-17343676 Msa0011490:intron 40.0%
AAATTGGGTTAATGTGGGGT+GGG + chr1_1:17343658-17343677 Msa0011490:intron 40.0%
! GTTTGGTTCACTTGAAGGAA+TGG + chr1_1:17343826-17343845 Msa0011490:intron 40.0%
! TGGAGGGAAAAGAGAAGTTT+TGG + chr1_1:17344001-17344020 Msa0011490:intron 40.0%
!! AGGGAAAAGAGAAGTTTTGG+AGG + chr1_1:17344004-17344023 Msa0011490:intron 40.0%
!!! GGGAAAAGAGAAGTTTTGGA+GGG + chr1_1:17344005-17344024 Msa0011490:intron 40.0%
GTAATTTCAGCACAGAGCTT+TGG + chr1_1:17344190-17344209 Msa0011490:intron 40.0%
GGTCCTAGAGAATTAAGGTA+TGG - chr1_1:17344232-17344251 None:intergenic 40.0%
AGTTGGGTCCTAGAGAATTA+AGG - chr1_1:17344237-17344256 None:intergenic 40.0%
TTTGCACCATGTGTGAAGTT+GGG - chr1_1:17344253-17344272 None:intergenic 40.0%
TTCAAATATATGGCCAGGAG+GGG + chr1_1:17344513-17344532 Msa0011490:intron 40.0%
GGTCAAAATGATCTTACTGG+TGG + chr1_1:17344598-17344617 Msa0011490:CDS 40.0%
! GTTTAGGGGCAAGATCATTT+TGG + chr1_1:17344837-17344856 Msa0011490:CDS 40.0%
ATCACTACGAAGTTGAGCTA+GGG - chr1_1:17344996-17345015 None:intergenic 40.0%
AAAATGGGGTCATCTTGGTT+TGG - chr1_1:17345100-17345119 None:intergenic 40.0%
TATGACATTCGTGCTAGATG+TGG + chr1_1:17345363-17345382 Msa0011490:intron 40.0%
ATCCTCCCATTCCTCTAAAT+AGG + chr1_1:17345529-17345548 Msa0011490:intron 40.0%
TCCTCCCATTCCTCTAAATA+GGG + chr1_1:17345530-17345549 Msa0011490:intron 40.0%
CATGCCCTATTTAGAGGAAT+GGG - chr1_1:17345537-17345556 None:intergenic 40.0%
ACATGCCCTATTTAGAGGAA+TGG - chr1_1:17345538-17345557 None:intergenic 40.0%
CTGTAACATGCCCTATTTAG+AGG - chr1_1:17345543-17345562 None:intergenic 40.0%
CTACAGCTCCACCAATATAT+AGG - chr1_1:17345825-17345844 None:intergenic 40.0%
CTATATATTGGTGGAGCTGT+AGG + chr1_1:17345823-17345842 Msa0011490:intron 40.0%
GACCAAAGTTCAAATGCTAC+TGG - chr1_1:17346090-17346109 None:intergenic 40.0%
AATGTTTGCGAAACACACAC+GGG + chr1_1:17346269-17346288 Msa0011490:intron 40.0%
ACAATAATAGAGCCCATTGG+GGG - chr1_1:17346421-17346440 None:intergenic 40.0%
GACAATAATAGAGCCCATTG+GGG - chr1_1:17346422-17346441 None:intergenic 40.0%
! TACCAAAGTGATGATGAGAG+AGG + chr1_1:17346716-17346735 Msa0011490:intron 40.0%
GCACTTAGAGAGAGTGAAAA+AGG + chr1_1:17346738-17346757 Msa0011490:intron 40.0%
AAAAGGAAATTGACGAGAGG+TGG + chr1_1:17346755-17346774 Msa0011490:intron 40.0%
GTGGTATGAAGTTAAGAGAC+AGG + chr1_1:17346774-17346793 Msa0011490:intron 40.0%
GATCTATACCACGATGCAAA+AGG - chr1_1:17346927-17346946 None:intergenic 40.0%
CAATAGAAGTTTGGCGTTTC+TGG + chr1_1:17347250-17347269 Msa0011490:intron 40.0%
CATACATGGTTTGACCGTTA+AGG - chr1_1:17347985-17348004 None:intergenic 40.0%
CTTAACGGTCAAACCATGTA+TGG + chr1_1:17347983-17348002 Msa0011490:intron 40.0%
! GATCATACTGGTGGTGTATT+TGG + chr1_1:17348099-17348118 Msa0011490:intron 40.0%
ATTGTGTTCATGTAGCTTGG+TGG + chr1_1:17348128-17348147 Msa0011490:intron 40.0%
! ACAAGAAATACTTTGAGGGC+CGG - chr1_1:17348344-17348363 None:intergenic 40.0%
! ACAAGAAATACTTTGAGGGC+CGG - chr1_1:17348344-17348363 None:intergenic 40.0%
! TTTTTACCTGTCTCGGTAAC+AGG + chr1_1:17348506-17348525 Msa0011490:intron 40.0%
!!! AGTTGCTTTTGGTGTGTTGA+TGG + chr1_1:17348532-17348551 Msa0011490:intron 40.0%
AGGATGTCTTCTGCTTCAAA+AGG + chr1_1:17349011-17349030 Msa0011490:intron 40.0%
TGTGTTGTCCTTTCTTTCTG+AGG - chr1_1:17349314-17349333 None:intergenic 40.0%
TCAGAAAGAAAGGACAACAC+AGG + chr1_1:17349313-17349332 Msa0011490:intron 40.0%
AAACTCTGATACTGGTGGTT+TGG + chr1_1:17350004-17350023 Msa0011490:CDS 40.0%
GAGAAAAGAGAAGAGAGAGA+AGG - chr1_1:17350244-17350263 None:intergenic 40.0%
CAGCATGCATCTACTATAAG+AGG - chr1_1:17350474-17350493 None:intergenic 40.0%
AGAAAATAGGGAGTGAAGGT+GGG - chr1_1:17351016-17351035 None:intergenic 40.0%
AAGAAAATAGGGAGTGAAGG+TGG - chr1_1:17351017-17351036 None:intergenic 40.0%
! TACCCCTTTCAGCACATTTT+TGG + chr1_1:17351350-17351369 Msa0011490:intron 40.0%
! ACCCCTTTCAGCACATTTTT+GGG + chr1_1:17351351-17351370 Msa0011490:intron 40.0%
ACCCAAAAATGTGCTGAAAG+GGG - chr1_1:17351355-17351374 None:intergenic 40.0%
CAACCCAAAAATGTGCTGAA+AGG - chr1_1:17351357-17351376 None:intergenic 40.0%
!!! CTTTCAGCACATTTTTGGGT+TGG + chr1_1:17351355-17351374 Msa0011490:intron 40.0%
AGTGTATGGTGCAACAATTG+TGG - chr1_1:17352002-17352021 None:intergenic 40.0%
CTGCTGATATCTTTGTGTCT+TGG - chr1_1:17352234-17352253 None:intergenic 40.0%
CAAGACACAAAGATATCAGC+AGG + chr1_1:17352232-17352251 Msa0011490:intron 40.0%
! TAGGGATTGCAGCATTTTAG+AGG - chr1_1:17352494-17352513 None:intergenic 40.0%
TCCCTAATATTTCTCCTCAC+TGG + chr1_1:17352508-17352527 Msa0011490:intron 40.0%
CACCAGTGAGGAGAAATATT+AGG - chr1_1:17352513-17352532 None:intergenic 40.0%
AAACGATGACACAACAGGAT+AGG - chr1_1:17352547-17352566 None:intergenic 40.0%
CATAAAATATGCAAGGTCCG+CGG + chr1_1:17352697-17352716 Msa0011490:intron 40.0%
!!! ATTTTTTTTTGTGGTGGCCG+GGG - chr1_1:17352729-17352748 None:intergenic 40.0%
CCGAGTTTGCATAGAAATTG+GGG - chr1_1:17352770-17352789 None:intergenic 40.0%
CCCCAATTTCTATGCAAACT+CGG + chr1_1:17352767-17352786 Msa0011490:intron 40.0%
GCCGAGTTTGCATAGAAATT+GGG - chr1_1:17352771-17352790 None:intergenic 40.0%
AGCCGAGTTTGCATAGAAAT+TGG - chr1_1:17352772-17352791 None:intergenic 40.0%
CCGAGTTTGCATGGAAATTA+GGG - chr1_1:17353065-17353084 None:intergenic 40.0%
CCCTAATTTCCATGCAAACT+CGG + chr1_1:17352793-17352812 Msa0011490:intron 40.0%
! AACCCTAAACCGTGTTTTCT+TGG + chr1_1:17352828-17352847 Msa0011490:intron 40.0%
! AACCCTAAACCGTGTTTTCT+TGG - chr1_1:17352828-17352847 None:intergenic 40.0%
CCCTAATTTCCATGCAAACT+CGG - chr1_1:17352793-17352812 None:intergenic 40.0%
CCGAGTTTGCATGGAAATTA+GGG + chr1_1:17353065-17353084 Msa0011490:intron 40.0%
CCCTAATTTCCATGCAAACT+CGG - chr1_1:17352793-17352812 None:intergenic 40.0%
CCGAGTTTGCATGGAAATTA+GGG + chr1_1:17353065-17353084 Msa0011490:intron 40.0%
CTGCTGATATCTTTGTGTCT+TGG - chr1_1:17352234-17352253 None:intergenic 40.0%
CAAGACACAAAGATATCAGC+AGG + chr1_1:17352232-17352251 Msa0011490:intron 40.0%
ACACTATATAGGAGCTCACA+TGG + chr1_1:17354022-17354041 Msa0011490:intron 40.0%
GACCCAAGAGAATCAAGATA+TGG - chr1_1:17354146-17354165 None:intergenic 40.0%
! GTTTAGTCCATTTTCCCTTC+AGG + chr1_1:17354247-17354266 Msa0011490:CDS 40.0%
TACTGAACCTGAAGGGAAAA+TGG - chr1_1:17354257-17354276 None:intergenic 40.0%
ACAAGGTTCATTAGGGATCA+AGG + chr1_1:17354305-17354324 Msa0011490:CDS 40.0%
AATGTTGCAAATACACCTCC+TGG - chr1_1:17354449-17354468 None:intergenic 40.0%
GGTCAAAATGATCTTACTGC+TGG + chr1_1:17354518-17354537 Msa0011490:CDS 40.0%
! ATTTAGGGGCAAGGTCATTT+TGG + chr1_1:17354800-17354819 Msa0011490:CDS 40.0%
ACATATGTGATTGCTGCTAG+TGG - chr1_1:17354985-17355004 None:intergenic 40.0%
!! TATAACATTAGTGCTGGCTG+TGG + chr1_1:17355283-17355302 Msa0011490:CDS 40.0%
ATCCTCCCATTCCACTAAAT+AGG + chr1_1:17355449-17355468 Msa0011490:CDS 40.0%
TCCTCCCATTCCACTAAATA+GGG + chr1_1:17355450-17355469 Msa0011490:CDS 40.0%
! TAGTTTCATCTCGGTTCGAG+TGG - chr1_1:17333847-17333866 None:intergenic 45.0%
CCCACCAAGTATTATACCTC+AGG + chr1_1:17334109-17334128 Msa0011490:CDS 45.0%
CCCTGAGGTATAATACTTGG+TGG - chr1_1:17334113-17334132 None:intergenic 45.0%
CCACCCTGAGGTATAATACT+TGG - chr1_1:17334116-17334135 None:intergenic 45.0%
CCAAGTATTATACCTCAGGG+TGG + chr1_1:17334113-17334132 Msa0011490:CDS 45.0%
! GGTCAAAATGATCTTGGTGC+TGG + chr1_1:17334389-17334408 Msa0011490:CDS 45.0%
!!! GATCTTGGTGCTGGCTTTTT+TGG + chr1_1:17334398-17334417 Msa0011490:CDS 45.0%
!!! ACGCCCCACTTGTTTTTTAG+GGG - chr1_1:17335054-17335073 None:intergenic 45.0%
ATACACAACACAGGACCCAT+TGG + chr1_1:17335165-17335184 Msa0011490:intron 45.0%
ATATAAGGGAGGCAGCCAAT+GGG - chr1_1:17335183-17335202 None:intergenic 45.0%
AATATAAGGGAGGCAGCCAA+TGG - chr1_1:17335184-17335203 None:intergenic 45.0%
! CATCCCCTAGTTGTTTGTTG+TGG + chr1_1:17335535-17335554 Msa0011490:CDS 45.0%
!! GTTGTTTGTTGTGGCTATGG+AGG + chr1_1:17335544-17335563 Msa0011490:CDS 45.0%
! AGCAATAGTGTTGGATGTGG+AGG + chr1_1:17335580-17335599 Msa0011490:CDS 45.0%
GACCATCTGCAAGAGTGAAT+TGG + chr1_1:17335650-17335669 Msa0011490:CDS 45.0%
TCCCAATTCACTCTTGCAGA+TGG - chr1_1:17335655-17335674 None:intergenic 45.0%
TCTGCAAGAGTGAATTGGGA+TGG + chr1_1:17335655-17335674 Msa0011490:CDS 45.0%
GCCATATTCAAGGGAATGGA+TGG - chr1_1:17335748-17335767 None:intergenic 45.0%
GCATGCCATATTCAAGGGAA+TGG - chr1_1:17335752-17335771 None:intergenic 45.0%
CTGTGGCATGCCATATTCAA+GGG - chr1_1:17335757-17335776 None:intergenic 45.0%
TCTGTGGCATGCCATATTCA+AGG - chr1_1:17335758-17335777 None:intergenic 45.0%
TAGCAGAACGATGTCCAATG+CGG + chr1_1:17336646-17336665 Msa0011490:intron 45.0%
TGAGTTGTTCTCCTCGTAAG+TGG + chr1_1:17336669-17336688 Msa0011490:intron 45.0%
! GAGATAGCGGTGAATCTTGT+TGG - chr1_1:17336730-17336749 None:intergenic 45.0%
AAGATTCACCGCTATCTCCA+GGG + chr1_1:17336732-17336751 Msa0011490:intron 45.0%
GTATACTTCCCTGGAGATAG+CGG - chr1_1:17336743-17336762 None:intergenic 45.0%
TTCGCCTCCAAGGAAGAAAT+CGG + chr1_1:17336841-17336860 Msa0011490:intron 45.0%
!! AGTACCGATTTCTTCCTTGG+AGG - chr1_1:17336848-17336867 None:intergenic 45.0%
GAACGTGACTTAAGTCACGT+AGG + chr1_1:17336905-17336924 Msa0011490:intron 45.0%
CGACATGACTTATGTCACGT+TGG - chr1_1:17336938-17336957 None:intergenic 45.0%
TATGCGTGACTTAAGTCACG+TGG + chr1_1:17336967-17336986 Msa0011490:intron 45.0%
ATGCGTGACTTAAGTCACGT+GGG + chr1_1:17336968-17336987 Msa0011490:intron 45.0%
!!! TAAGTCACGTGGGAGCATTT+TGG + chr1_1:17336978-17336997 Msa0011490:intron 45.0%
!!! AAGTCACGTGGGAGCATTTT+GGG + chr1_1:17336979-17336998 Msa0011490:intron 45.0%
!!! GGGAGCATTTTGGGAAGTTA+AGG + chr1_1:17336988-17337007 Msa0011490:intron 45.0%
! ATGTAGGGTTGGCAATGATC+GGG - chr1_1:17337621-17337640 None:intergenic 45.0%
GAAAAGTGGTGCCCATATGT+AGG - chr1_1:17337637-17337656 None:intergenic 45.0%
TACAGTAGCGTTCCGAAACA+CGG - chr1_1:17337685-17337704 None:intergenic 45.0%
GCTACTGTACTCAACGGAAT+TGG + chr1_1:17337696-17337715 Msa0011490:intron 45.0%
GCCCCTTGCCAATTTAGTAT+AGG + chr1_1:17337746-17337765 Msa0011490:intron 45.0%
GACACGAGTAAATGATAGGG+TGG - chr1_1:17338134-17338153 None:intergenic 45.0%
!! CCGAACATAGGGTATTTTCG+AGG - chr1_1:17338170-17338189 None:intergenic 45.0%
!! GGACTCTGAAATCCGAACAT+AGG - chr1_1:17338182-17338201 None:intergenic 45.0%
GGGATACTATGAACGGTCAA+CGG + chr1_1:17338335-17338354 Msa0011490:intron 45.0%
AGCCTTACTCTCTCAATGCA+TGG - chr1_1:17338525-17338544 None:intergenic 45.0%
TGGGGACGTTCTAACCTAAT+CGG - chr1_1:17338594-17338613 None:intergenic 45.0%
GGACAAAACGATAATCCCTC+TGG + chr1_1:17338839-17338858 Msa0011490:intron 45.0%
TCATACCTGATGGTCGGATT+AGG - chr1_1:17338917-17338936 None:intergenic 45.0%
ATTGGCCACGAAGATGATAG+AGG - chr1_1:17339018-17339037 None:intergenic 45.0%
AACCCAAGTAGTGCCCAAAT+TGG - chr1_1:17339036-17339055 None:intergenic 45.0%
AGCAGATTGCCTACCCAAAT+TGG + chr1_1:17339107-17339126 Msa0011490:intron 45.0%
GAGGCCTCCAAATTTCTTAG+GGG - chr1_1:17339283-17339302 None:intergenic 45.0%
GAGAGGCCTCCAAATTTCTT+AGG - chr1_1:17339285-17339304 None:intergenic 45.0%
ACCCTCACCCAAAGTTTATG+AGG - chr1_1:17339375-17339394 None:intergenic 45.0%
! TCAATTTCGCATCGGTGATG+GGG + chr1_1:17339506-17339525 Msa0011490:intron 45.0%
ACATCAGAGGCCAAAGTAAG+GGG - chr1_1:17339954-17339973 None:intergenic 45.0%
GTTTGGGGAGCTTCTCTAAA+AGG + chr1_1:17339993-17340012 Msa0011490:intron 45.0%
GTTTCGACATCACTGCAACT+TGG + chr1_1:17340147-17340166 Msa0011490:intron 45.0%
TGATGGAAGTTGTGGTGCTT+CGG + chr1_1:17340561-17340580 Msa0011490:intron 45.0%
TGTCACGAAGTATACCGCAA+AGG - chr1_1:17340595-17340614 None:intergenic 45.0%
CGGTATACTTCGTGACAACA+AGG + chr1_1:17340598-17340617 Msa0011490:intron 45.0%
TTTCTTCTAATGAGGGGCAG+GGG + chr1_1:17340639-17340658 Msa0011490:intron 45.0%
! GACATACAATTTGGGACGGA+GGG - chr1_1:17341137-17341156 None:intergenic 45.0%
TTTCTTAACCAGTGCTCCAG+AGG + chr1_1:17341567-17341586 Msa0011490:intron 45.0%
!! TGTTGGGTCTTGTTAACCTC+TGG - chr1_1:17341586-17341605 None:intergenic 45.0%
! CAACTGAAGTGCTTGAAAGG+CGG - chr1_1:17341959-17341978 None:intergenic 45.0%
! TGGCAACTGAAGTGCTTGAA+AGG - chr1_1:17341962-17341981 None:intergenic 45.0%
CAAGCACTTCAGTTGCCAAA+CGG + chr1_1:17341964-17341983 Msa0011490:CDS 45.0%
TGCTCTGTTTGGAAGTTTGG+AGG + chr1_1:17342288-17342307 Msa0011490:intron 45.0%
GCTCTGTTTGGAAGTTTGGA+GGG + chr1_1:17342289-17342308 Msa0011490:intron 45.0%
CTCTGTTTGGAAGTTTGGAG+GGG + chr1_1:17342290-17342309 Msa0011490:intron 45.0%
GGTAAGTGGATGGAGTTTAG+AGG + chr1_1:17343198-17343217 Msa0011490:intron 45.0%
! GAGCTTTTCCTGCGGATTTT+TGG + chr1_1:17343376-17343395 Msa0011490:intron 45.0%
GAATTAGCCCAAAAATCCGC+AGG - chr1_1:17343387-17343406 None:intergenic 45.0%
TTCCCAGGTGAGGTAATACT+AGG + chr1_1:17343472-17343491 Msa0011490:intron 45.0%
!!! CCAGGATTTTTCTAGAGCCT+GGG - chr1_1:17343504-17343523 None:intergenic 45.0%
AAATTGGGTTAAGGTGGGGT+TGG + chr1_1:17343588-17343607 Msa0011490:intron 45.0%
AATTGGGTTAAGGTGGGGTT+GGG + chr1_1:17343589-17343608 Msa0011490:intron 45.0%
TGGTTCACTTGAAGGAATGG+AGG + chr1_1:17343829-17343848 Msa0011490:intron 45.0%
! ACTTGAAGGAATGGAGGTGT+GGG + chr1_1:17343835-17343854 Msa0011490:intron 45.0%
! AATGGAGGTGTGGGAAAGTT+TGG + chr1_1:17343844-17343863 Msa0011490:intron 45.0%
GTTTGCACCATGTGTGAAGT+TGG - chr1_1:17344254-17344273 None:intergenic 45.0%
ATACACAACACAGGGCCAAT+TGG + chr1_1:17344860-17344879 Msa0011490:CDS 45.0%
GATCACTACGAAGTTGAGCT+AGG - chr1_1:17344997-17345016 None:intergenic 45.0%
ACATATGCGATTGCAGCAAG+AGG - chr1_1:17345022-17345041 None:intergenic 45.0%
GCTTGAAAATGGGGTCATCT+TGG - chr1_1:17345105-17345124 None:intergenic 45.0%
GTTAGCTGCCTCTGTGTAAT+GGG - chr1_1:17345469-17345488 None:intergenic 45.0%
TGTTAGCTGCCTCTGTGTAA+TGG - chr1_1:17345470-17345489 None:intergenic 45.0%
TATATTGGTGGAGCTGTAGG+TGG + chr1_1:17345826-17345845 Msa0011490:intron 45.0%
TGGAGCTGTAGGTGGATAAA+TGG + chr1_1:17345834-17345853 Msa0011490:intron 45.0%
GTATCGTTATTAGAGGAGGC+TGG - chr1_1:17345911-17345930 None:intergenic 45.0%
GGCAGTAAGCGAAACTTTGT+TGG - chr1_1:17346343-17346362 None:intergenic 45.0%
AGAAAAGTAGTTGCCCCCAA+TGG + chr1_1:17346405-17346424 Msa0011490:intron 45.0%
GAAAAGTAGTTGCCCCCAAT+GGG + chr1_1:17346406-17346425 Msa0011490:intron 45.0%
TGCCTCTCTCATCATCACTT+TGG - chr1_1:17346721-17346740 None:intergenic 45.0%
AAGTTAAGAGACAGGTCGTG+TGG + chr1_1:17346782-17346801 Msa0011490:intron 45.0%
! GTTGTCATCCTTTTGCATCG+TGG + chr1_1:17346916-17346935 Msa0011490:intron 45.0%
GATGGTTATGTCTCATCCAC+TGG - chr1_1:17347158-17347177 None:intergenic 45.0%
CTTCTCTTTCCTTAAACCGG+TGG - chr1_1:17347283-17347302 None:intergenic 45.0%
TCGGTCGTGTGAACAAATGA+GGG + chr1_1:17347434-17347453 Msa0011490:intron 45.0%
TGTGAACAAATGAGGGAGAG+TGG + chr1_1:17347441-17347460 Msa0011490:intron 45.0%
GTGAACAAATGAGGGAGAGT+GGG + chr1_1:17347442-17347461 Msa0011490:intron 45.0%
! ACAAGGTATCCATGTCCCTT+TGG + chr1_1:17347500-17347519 Msa0011490:intron 45.0%
! TCCATGTCCCTTTGGAAGAT+CGG + chr1_1:17347508-17347527 Msa0011490:intron 45.0%
GTAACCACCGATCTTCCAAA+GGG - chr1_1:17347518-17347537 None:intergenic 45.0%
CTGATGCCAATCTTTGAGCA+TGG + chr1_1:17348065-17348084 Msa0011490:intron 45.0%
! CAAGAAATACTTTGAGGGCC+GGG - chr1_1:17348343-17348362 None:intergenic 45.0%
! CAAGAAATACTTTGAGGGCC+GGG - chr1_1:17348343-17348362 None:intergenic 45.0%
!! GTAACAGGCGTAGTTGCTTT+TGG + chr1_1:17348521-17348540 Msa0011490:intron 45.0%
TAGCCAATAAAATCCCAGCC+TGG - chr1_1:17349665-17349684 None:intergenic 45.0%
GCACCGAAGTTAAAAATGGC+AGG - chr1_1:17349981-17350000 None:intergenic 45.0%
GGTGCTTCAAACTCTGATAC+TGG + chr1_1:17349996-17350015 Msa0011490:CDS 45.0%
GCTTCAAACTCTGATACTGG+TGG + chr1_1:17349999-17350018 Msa0011490:CDS 45.0%
CACACACAAAGAGAGAAGAG+AGG - chr1_1:17350302-17350321 None:intergenic 45.0%
! CGGACCAAGACCAAGAATTT+TGG - chr1_1:17350331-17350350 None:intergenic 45.0%
ACATGAGTTAACTCACGCTG+AGG - chr1_1:17350757-17350776 None:intergenic 45.0%
CAGCGTGAGTTAACTCATGT+AGG + chr1_1:17350757-17350776 Msa0011490:intron 45.0%
TGCGTAAGTTAACTCGCGTT+TGG - chr1_1:17350798-17350817 None:intergenic 45.0%
GAAAATAGGGAGTGAAGGTG+GGG - chr1_1:17351015-17351034 None:intergenic 45.0%
GAATGAAAAGCTCACCAGTG+AGG - chr1_1:17352525-17352544 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + chr1_1:17352668-17352687 Msa0011490:intron 45.0%
GCCGAGTTTGCATGGAAATT+AGG - chr1_1:17353064-17353083 None:intergenic 45.0%
GCCGAGTTTGCATGGAAATT+AGG + chr1_1:17353064-17353083 Msa0011490:intron 45.0%
GCCGAGTTTGCATGGAAATT+AGG + chr1_1:17353064-17353083 Msa0011490:intron 45.0%
GAATGAAAAGCCCATCAGTG+AGG + chr1_1:17353216-17353235 Msa0011490:intron 45.0%
CTTGGGTCAAACTTCACACA+TGG + chr1_1:17354158-17354177 Msa0011490:CDS 45.0%
GTGCAAACTTTGCAACAGCA+GGG + chr1_1:17354180-17354199 Msa0011490:CDS 45.0%
AGGGTTTGAACTTCCACTAG+TGG + chr1_1:17355231-17355250 Msa0011490:intron 45.0%
GGATGGTACTCATTACACAG+AGG + chr1_1:17355378-17355397 Msa0011490:CDS 45.0%
!!! AGTTATAATTTTTTTATTTT+TGG + chr1_1:17333430-17333449 Msa0011490:intron 5.0%
!! TAATTATAATTCTAAATAAA+AGG + chr1_1:17333950-17333969 Msa0011490:intron 5.0%
!!! ATTTTACTAATTTTTTTAAA+TGG + chr1_1:17334522-17334541 Msa0011490:intron 5.0%
!! AAAAAATTTACTTATAATTT+GGG - chr1_1:17340914-17340933 None:intergenic 5.0%
!! AAAAAAATTTACTTATAATT+TGG - chr1_1:17340915-17340934 None:intergenic 5.0%
!!! TTTAATTATTATTTTTTGTT+GGG - chr1_1:17341602-17341621 None:intergenic 5.0%
!!! TTGATTTTTTTAATTAAATT+GGG + chr1_1:17343573-17343592 Msa0011490:intron 5.0%
!!! ATTTTACTTAATATTTTTTT+TGG + chr1_1:17346018-17346037 Msa0011490:intron 5.0%
!! AAATTAAATAAATAAAAACA+CGG - chr1_1:17347316-17347335 None:intergenic 5.0%
!! TATTATTAAATAATCATATT+TGG + chr1_1:17349773-17349792 Msa0011490:intron 5.0%
!!! TTATTTGTATTTAAAATTAA+GGG - chr1_1:17351400-17351419 None:intergenic 5.0%
!!! ATTTTATAATAACAAATAAT+AGG + chr1_1:17352114-17352133 Msa0011490:intron 5.0%
!!! TTTTATAATAACAAATAATA+GGG + chr1_1:17352115-17352134 Msa0011490:intron 5.0%
!! CAAAAATATAATTAATAATT+AGG + chr1_1:17352288-17352307 Msa0011490:intron 5.0%
!!! AATCATAATTTTATTTTTTT+AGG + chr1_1:17353722-17353741 Msa0011490:intron 5.0%
GGTGACTCAAACTCAGACAC+TGG + chr1_1:17332725-17332744 Msa0011490:CDS 50.0%
GACTCAAACTCAGACACTGG+TGG + chr1_1:17332728-17332747 Msa0011490:CDS 50.0%
AAACTCAGACACTGGTGGCT+TGG + chr1_1:17332733-17332752 Msa0011490:CDS 50.0%
! CCATCAGAGTACCTCCCATT+AGG - chr1_1:17332812-17332831 None:intergenic 50.0%
!! CCTAATGGGAGGTACTCTGA+TGG + chr1_1:17332809-17332828 Msa0011490:CDS 50.0%
AAAGGACTGAATCCACCCTG+AGG - chr1_1:17334128-17334147 None:intergenic 50.0%
!! GCTCGACATTTTTCAGCGTG+AGG + chr1_1:17334782-17334801 Msa0011490:intron 50.0%
TGGATGTGGAGGAACCATAG+AGG + chr1_1:17335591-17335610 Msa0011490:CDS 50.0%
GGAGGAACCATAGAGGTCAA+TGG + chr1_1:17335598-17335617 Msa0011490:CDS 50.0%
AGGAGAACAACTCACCGCAT+TGG - chr1_1:17336663-17336682 None:intergenic 50.0%
GTTGTTCTCCTCGTAAGTGG+AGG + chr1_1:17336672-17336691 Msa0011490:intron 50.0%
ATTCCAAGCCTCCACTTACG+AGG - chr1_1:17336683-17336702 None:intergenic 50.0%
CAAGATTCACCGCTATCTCC+AGG + chr1_1:17336731-17336750 Msa0011490:intron 50.0%
! TGGTTGGTTGGGTGCTATGA+AGG + chr1_1:17336814-17336833 Msa0011490:intron 50.0%
CGGTACTTAAAGAACGGTGG+AGG + chr1_1:17336861-17336880 Msa0011490:intron 50.0%
GCTATGCATGCTCCGTGTTT+CGG + chr1_1:17337670-17337689 Msa0011490:intron 50.0%
CGGAACGCTACTGTACTCAA+CGG + chr1_1:17337690-17337709 Msa0011490:intron 50.0%
TACGTGTGTCGGAGTCAACT+AGG + chr1_1:17338042-17338061 Msa0011490:intron 50.0%
TGTACGGTGATCCTTACGTG+CGG - chr1_1:17338548-17338567 None:intergenic 50.0%
ACTTGCCTAATCCGACCATC+AGG + chr1_1:17338909-17338928 Msa0011490:intron 50.0%
TGGCCAATTTGGGCACTACT+TGG + chr1_1:17339030-17339049 Msa0011490:intron 50.0%
GGCCAATTTGGGCACTACTT+GGG + chr1_1:17339031-17339050 Msa0011490:intron 50.0%
GCATTGGAAGCCTTGAGACA+AGG + chr1_1:17339480-17339499 Msa0011490:intron 50.0%
!! GCTAGGAGCACTTTGTCACT+TGG + chr1_1:17339528-17339547 Msa0011490:intron 50.0%
! GGGGAGCTTCTCTAAAAGGA+AGG + chr1_1:17339997-17340016 Msa0011490:intron 50.0%
CTTCGGTGACATTGCCTTTG+CGG + chr1_1:17340578-17340597 Msa0011490:intron 50.0%
TTCTTCTAATGAGGGGCAGG+GGG + chr1_1:17340640-17340659 Msa0011490:intron 50.0%
AAACAGTGCCCCATGAGCAT+TGG + chr1_1:17340837-17340856 Msa0011490:intron 50.0%
! CGACATACAATTTGGGACGG+AGG - chr1_1:17341138-17341157 None:intergenic 50.0%
!! CTTGTTAACCTCTGGAGCAC+TGG - chr1_1:17341578-17341597 None:intergenic 50.0%
CAAACCACCAGTATCAGCGT+TGG - chr1_1:17341932-17341951 None:intergenic 50.0%
CAACGCTGATACTGGTGGTT+TGG + chr1_1:17341930-17341949 Msa0011490:CDS 50.0%
TGTTTGGAAGTTTGGAGGGG+AGG + chr1_1:17342293-17342312 Msa0011490:intron 50.0%
GTTTGGAAGTTTGGAGGGGA+GGG + chr1_1:17342294-17342313 Msa0011490:intron 50.0%
TTTGGAAGTTTGGAGGGGAG+GGG + chr1_1:17342295-17342314 Msa0011490:intron 50.0%
!!! TATTGGAGGAGGGTTTTGGG+AGG + chr1_1:17342453-17342472 Msa0011490:intron 50.0%
!!! ATTGGAGGAGGGTTTTGGGA+GGG + chr1_1:17342454-17342473 Msa0011490:intron 50.0%
TGCACGGGTAGATGTCTAGT+TGG - chr1_1:17342665-17342684 None:intergenic 50.0%
CATCTACCCGTGCATATGCA+CGG + chr1_1:17342671-17342690 Msa0011490:intron 50.0%
ATCTACCCGTGCATATGCAC+GGG + chr1_1:17342672-17342691 Msa0011490:intron 50.0%
AACTTGCCCGTGCATATGCA+CGG - chr1_1:17342681-17342700 None:intergenic 50.0%
!! AGAGGTAATGGGAGGGTAAG+TGG + chr1_1:17343184-17343203 Msa0011490:intron 50.0%
! GTAATGGGAGGGTAAGTGGA+TGG + chr1_1:17343188-17343207 Msa0011490:intron 50.0%
TATATGCCTTGGAAGTGGGC+AGG + chr1_1:17343264-17343283 Msa0011490:intron 50.0%
ATATGCCTTGGAAGTGGGCA+GGG + chr1_1:17343265-17343284 Msa0011490:intron 50.0%
! GGCTGGCTACAAAGGAAAGT+TGG - chr1_1:17343337-17343356 None:intergenic 50.0%
AGTTGTAGTAATGGCTGGGC+TGG - chr1_1:17343354-17343373 None:intergenic 50.0%
! TGCCAAGGATTTAGGTTCCC+AGG + chr1_1:17343457-17343476 Msa0011490:intron 50.0%
CACCTGGGAACCTAAATCCT+TGG - chr1_1:17343462-17343481 None:intergenic 50.0%
! AGGATTTAGGTTCCCAGGTG+AGG + chr1_1:17343462-17343481 Msa0011490:intron 50.0%
!! CCCAGGCTCTAGAAAAATCC+TGG + chr1_1:17343501-17343520 Msa0011490:intron 50.0%
!!! GCCAGGATTTTTCTAGAGCC+TGG - chr1_1:17343505-17343524 None:intergenic 50.0%
AAAAATCCTGGCTCCTCCAC+TGG + chr1_1:17343513-17343532 Msa0011490:intron 50.0%
ATTGGGTTAAGGTGGGGTTG+GGG + chr1_1:17343590-17343609 Msa0011490:intron 50.0%
GGTTAATGTGGGGTGGGAAA+TGG + chr1_1:17343664-17343683 Msa0011490:intron 50.0%
GGGTGGGAAATGGTTAACGT+GGG + chr1_1:17343674-17343693 Msa0011490:intron 50.0%
TGGGAAATGGTTAACGTGGG+TGG + chr1_1:17343677-17343696 Msa0011490:intron 50.0%
GGGAAATGGTTAACGTGGGT+GGG + chr1_1:17343678-17343697 Msa0011490:intron 50.0%
GGAAATGGTTAACGTGGGTG+GGG + chr1_1:17343679-17343698 Msa0011490:intron 50.0%
GAAATGGTTAACGTGGGTGG+GGG + chr1_1:17343680-17343699 Msa0011490:intron 50.0%
CACTTGAAGGAATGGAGGTG+TGG + chr1_1:17343834-17343853 Msa0011490:intron 50.0%
GAGGTGTGGGAAAGTTTGGA+GGG + chr1_1:17343848-17343867 Msa0011490:intron 50.0%
CTAGGACCCAACTTCACACA+TGG + chr1_1:17344244-17344263 Msa0011490:CDS 50.0%
AACGTTGCAAATACCCCTCC+TGG - chr1_1:17344529-17344548 None:intergenic 50.0%
AGGGTTTGAGCTTCCACTAG+TGG + chr1_1:17345311-17345330 Msa0011490:intron 50.0%
CTTCCACTAGTGGCATGTTG+TGG + chr1_1:17345321-17345340 Msa0011490:intron 50.0%
TAGCCACAACATGCCACTAG+TGG - chr1_1:17345327-17345346 None:intergenic 50.0%
CTAGTGGCATGTTGTGGCTA+TGG + chr1_1:17345327-17345346 Msa0011490:intron 50.0%
GGATGGAACCCATTACACAG+AGG + chr1_1:17345458-17345477 Msa0011490:intron 50.0%
GCCCTATTTAGAGGAATGGG+AGG - chr1_1:17345534-17345553 None:intergenic 50.0%
!! CGTTTCTGGAAGTGTTCCAC+CGG + chr1_1:17347264-17347283 Msa0011490:intron 50.0%
!! GGAAGTGTTCCACCGGTTTA+AGG + chr1_1:17347271-17347290 Msa0011490:intron 50.0%
CTCGGTCGTGTGAACAAATG+AGG + chr1_1:17347433-17347452 Msa0011490:intron 50.0%
ACCGATCTTCCAAAGGGACA+TGG - chr1_1:17347512-17347531 None:intergenic 50.0%
! ATGTCCCTTTGGAAGATCGG+TGG + chr1_1:17347511-17347530 Msa0011490:intron 50.0%
GGTAACCACCGATCTTCCAA+AGG - chr1_1:17347519-17347538 None:intergenic 50.0%
TAAAGGCGAGCTTCACCCAA+AGG - chr1_1:17347934-17347953 None:intergenic 50.0%
GCAGCTCCATGCTCAAAGAT+TGG - chr1_1:17348074-17348093 None:intergenic 50.0%
TCTTTGAGCATGGAGCTGCA+TGG + chr1_1:17348075-17348094 Msa0011490:intron 50.0%
GAGCTGCATGGTGATCATAC+TGG + chr1_1:17348087-17348106 Msa0011490:intron 50.0%
CTGCATGGTGATCATACTGG+TGG + chr1_1:17348090-17348109 Msa0011490:intron 50.0%
CAATAAAATCCCAGCCTGGC+CGG - chr1_1:17349661-17349680 None:intergenic 50.0%
AAAGAGCAGAAAGACGGGCA+CGG + chr1_1:17351721-17351740 Msa0011490:intron 50.0%
TTAGGGTAGCCGAGTTTGCA+TGG + chr1_1:17353082-17353101 Msa0011490:intron 50.0%
GGTGCAAACTTTGCAACAGC+AGG + chr1_1:17354179-17354198 Msa0011490:CDS 50.0%
ATCCCTGCGAAGATGAGCTA+GGG - chr1_1:17354959-17354978 None:intergenic 50.0%
!! CTTCCACTAGTGGCTTGTTG+TGG + chr1_1:17355241-17355260 Msa0011490:CDS 50.0%
TTGCCACAACAAGCCACTAG+TGG - chr1_1:17355247-17355266 None:intergenic 50.0%
!! CTAGTGGCTTGTTGTGGCAA+TGG + chr1_1:17355247-17355266 Msa0011490:CDS 50.0%
GCCCTATTTAGTGGAATGGG+AGG - chr1_1:17355454-17355473 None:intergenic 50.0%
!! TGGTGGCGTTGGTGCTTGAA+GGG - chr1_1:17332765-17332784 None:intergenic 55.0%
!! ATGGTGGCGTTGGTGCTTGA+AGG - chr1_1:17332766-17332785 None:intergenic 55.0%
CAAGCACCAACGCCACCATA+TGG + chr1_1:17332767-17332786 Msa0011490:CDS 55.0%
! GTCTCTCCATATGGTGGCGT+TGG - chr1_1:17332776-17332795 None:intergenic 55.0%
AACCAGACATCAAACCGGCG+AGG + chr1_1:17333800-17333819 Msa0011490:intron 55.0%
ACATCAAACCGGCGAGGTCA+TGG + chr1_1:17333806-17333825 Msa0011490:intron 55.0%
TCTCCTCGTAAGTGGAGGCT+TGG + chr1_1:17336677-17336696 Msa0011490:intron 55.0%
!! TGAAGGCATCTTCGCCTCCA+AGG + chr1_1:17336831-17336850 Msa0011490:intron 55.0%
GTGGTGCCCATATGTAGGGT+TGG - chr1_1:17337632-17337651 None:intergenic 55.0%
AGAGTAAGGCTCCGCACGTA+AGG + chr1_1:17338534-17338553 Msa0011490:intron 55.0%
GGTGCTTCCAACGCTGATAC+TGG + chr1_1:17341922-17341941 Msa0011490:CDS 55.0%
GCTTCCAACGCTGATACTGG+TGG + chr1_1:17341925-17341944 Msa0011490:CDS 55.0%
!!! TTGGAGGAGGGTTTTGGGAG+GGG + chr1_1:17342455-17342474 Msa0011490:intron 55.0%
ACTTGCCCGTGCATATGCAC+GGG - chr1_1:17342680-17342699 None:intergenic 55.0%
TATGCCTTGGAAGTGGGCAG+GGG + chr1_1:17343266-17343285 Msa0011490:intron 55.0%
AGGAAAGTTGGAGCTGAGCC+TGG - chr1_1:17343325-17343344 None:intergenic 55.0%
!! AATGGCTGGGCTGGCTACAA+AGG - chr1_1:17343345-17343364 None:intergenic 55.0%
ATCGGTGAACCCACTTCCAG+TGG - chr1_1:17343532-17343551 None:intergenic 55.0%
GGGGTGGGAAATGGTTAACG+TGG + chr1_1:17343673-17343692 Msa0011490:intron 55.0%
! GGAGGTGTGGGAAAGTTTGG+AGG + chr1_1:17343847-17343866 Msa0011490:intron 55.0%
GTGGCATGTTGTGGCTATGG+CGG + chr1_1:17345330-17345349 Msa0011490:intron 55.0%
TGGCATGTTGTGGCTATGGC+GGG + chr1_1:17345331-17345350 Msa0011490:intron 55.0%
!! GCATTGTATGGTGCTGCCAG+TGG + chr1_1:17347139-17347158 Msa0011490:intron 55.0%
ACTACGCCTGTTACCGAGAC+AGG - chr1_1:17348515-17348534 None:intergenic 55.0%
ACCCACCACCCCATGATTTC+CGG + chr1_1:17349639-17349658 Msa0011490:intron 55.0%
! CGGCCAGGCTGGGATTTTAT+TGG + chr1_1:17349659-17349678 Msa0011490:intron 55.0%
!! TGGTAACGGCAGTGCTCGAA+AGG - chr1_1:17350036-17350055 None:intergenic 55.0%
! CGAGCACTGCCGTTACCATA+TGG + chr1_1:17350038-17350057 Msa0011490:CDS 55.0%
GATGCATGCTGCAACAACCG+TGG + chr1_1:17350483-17350502 Msa0011490:intron 55.0%
TGCGCGAGTTAACTCATGCG+AGG - chr1_1:17350604-17350623 None:intergenic 55.0%
TCGCATGAGTTAACTCGCGC+AGG + chr1_1:17350603-17350622 Msa0011490:intron 55.0%
GAGCGTGACTTAAGTCACGC+TGG - chr1_1:17350637-17350656 None:intergenic 55.0%
CAGCGTGAGTTAACACACGC+AGG + chr1_1:17350673-17350692 Msa0011490:intron 55.0%
GTTAGAGATTCGGCGTTGCC+CGG + chr1_1:17352310-17352329 Msa0011490:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr1_1:17352666-17352685 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr1_1:17352663-17352682 Msa0011490:intron 55.0%
AATCCGGGCAACGTTAACGC+CGG + chr1_1:17352976-17352995 Msa0011490:intron 55.0%
AAGCCCTAGCTCATCTTCGC+AGG + chr1_1:17354953-17354972 Msa0011490:intron 55.0%
AGCCCTAGCTCATCTTCGCA+GGG + chr1_1:17354954-17354973 Msa0011490:intron 55.0%
GATCCCTGCGAAGATGAGCT+AGG - chr1_1:17354960-17354979 None:intergenic 55.0%
!! GTGGCTTGTTGTGGCAATGG+AGG + chr1_1:17355250-17355269 Msa0011490:CDS 55.0%
!! GACCTCGCCGGTTTGATGTC+TGG - chr1_1:17333805-17333824 None:intergenic 60.0%
CAACTGAGCCATGACCTCGC+CGG - chr1_1:17333817-17333836 None:intergenic 60.0%
GGTGGAGGAAGCTGCGTTGA+AGG + chr1_1:17336876-17336895 Msa0011490:intron 60.0%
!! TTCGCATCGGTGATGGGGCT+AGG + chr1_1:17339511-17339530 Msa0011490:intron 60.0%
GAAGTTTGGAGGGGAGGGGA+GGG + chr1_1:17342299-17342318 Msa0011490:intron 60.0%
AAGTTTGGAGGGGAGGGGAG+GGG + chr1_1:17342300-17342319 Msa0011490:intron 60.0%
!!! TGGAGGAGGGTTTTGGGAGG+GGG + chr1_1:17342456-17342475 Msa0011490:intron 60.0%
ACACTAGCCCAGCCTAGCTG+GGG - chr1_1:17343302-17343321 None:intergenic 60.0%
GACACTAGCCCAGCCTAGCT+GGG - chr1_1:17343303-17343322 None:intergenic 60.0%
CTGGCTCCTCCACTGGAAGT+GGG + chr1_1:17343520-17343539 Msa0011490:intron 60.0%
GGTGAACCCACTTCCAGTGG+AGG - chr1_1:17343529-17343548 None:intergenic 60.0%
TTAAGGTGGGGTTGGGGCCT+GGG + chr1_1:17343596-17343615 Msa0011490:intron 60.0%
GGCATGTTGTGGCTATGGCG+GGG + chr1_1:17345332-17345351 Msa0011490:intron 60.0%
GCCGGAAATCATGGGGTGGT+GGG - chr1_1:17349643-17349662 None:intergenic 60.0%
CAGCCTGGCCGGAAATCATG+GGG - chr1_1:17349650-17349669 None:intergenic 60.0%
CCAGCCTGGCCGGAAATCAT+GGG - chr1_1:17349651-17349670 None:intergenic 60.0%
CCATGATTTCCGGCCAGGCT+GGG + chr1_1:17349649-17349668 Msa0011490:intron 60.0%
AAGGTCCGCGGTTCAAACCC+CGG + chr1_1:17352709-17352728 Msa0011490:intron 60.0%
ATCCGGGCAACGTTAACGCC+GGG + chr1_1:17352977-17352996 Msa0011490:intron 60.0%
GGAAGTTTGGAGGGGAGGGG+AGG + chr1_1:17342298-17342317 Msa0011490:intron 65.0%
ACTAGCCCAGCCTAGCTGGG+GGG - chr1_1:17343300-17343319 None:intergenic 65.0%
CACTAGCCCAGCCTAGCTGG+GGG - chr1_1:17343301-17343320 None:intergenic 65.0%
GGACACTAGCCCAGCCTAGC+TGG - chr1_1:17343304-17343323 None:intergenic 65.0%
!! GCTAGGCTGGGCTAGTGTCC+AGG + chr1_1:17343304-17343323 Msa0011490:intron 65.0%
CCACTTCCAGTGGAGGAGCC+AGG - chr1_1:17343522-17343541 None:intergenic 65.0%
CCTGGCTCCTCCACTGGAAG+TGG + chr1_1:17343519-17343538 Msa0011490:intron 65.0%
GTTAAGGTGGGGTTGGGGCC+TGG + chr1_1:17343595-17343614 Msa0011490:intron 65.0%
TAAGGTGGGGTTGGGGCCTG+GGG + chr1_1:17343597-17343616 Msa0011490:intron 65.0%
AACCGCCACGTTAACCCCCC+AGG - chr1_1:17343616-17343635 None:intergenic 65.0%
GGGGGTTAACGTGGCGGTTG+AGG + chr1_1:17343617-17343636 Msa0011490:intron 65.0%
GGCCGGAAATCATGGGGTGG+TGG - chr1_1:17349644-17349663 None:intergenic 65.0%
CCTGGCCGGAAATCATGGGG+TGG - chr1_1:17349647-17349666 None:intergenic 65.0%
CCACCCCATGATTTCCGGCC+AGG + chr1_1:17349644-17349663 Msa0011490:intron 65.0%
CCCATGATTTCCGGCCAGGC+TGG + chr1_1:17349648-17349667 Msa0011490:intron 65.0%
CCCAGCCTGGCCGGAAATCA+TGG - chr1_1:17349652-17349671 None:intergenic 65.0%
GACCCGGCGTTAACGTTGCC+CGG - chr1_1:17352982-17353001 None:intergenic 65.0%
TGGAGGGGAGGGGAGGGGAA+TGG + chr1_1:17342305-17342324 Msa0011490:intron 70.0%
AGGGGAGGGGAGGGGAATGG+AGG + chr1_1:17342308-17342327 Msa0011490:intron 70.0%
GCCTTGGAAGTGGGCAGGGG+CGG + chr1_1:17343269-17343288 Msa0011490:intron 70.0%
TCCGCCCCTGCCCACTTCCA+AGG - chr1_1:17343273-17343292 None:intergenic 70.0%
AGCCACCCCCCAGCTAGGCT+GGG + chr1_1:17343292-17343311 Msa0011490:intron 70.0%
AAGGTGGGGTTGGGGCCTGG+GGG + chr1_1:17343598-17343617 Msa0011490:intron 70.0%
TGGGGCCTGGGGGGTTAACG+TGG + chr1_1:17343608-17343627 Msa0011490:intron 70.0%
GGCCTGGGGGGTTAACGTGG+CGG + chr1_1:17343611-17343630 Msa0011490:intron 70.0%
GGTGGCCGGGGTTTGAACCG+CGG - chr1_1:17352717-17352736 None:intergenic 70.0%
GAGCCACCCCCCAGCTAGGC+TGG + chr1_1:17343291-17343310 Msa0011490:intron 75.0%
AGCCCAGCCTAGCTGGGGGG+TGG - chr1_1:17343297-17343316 None:intergenic 75.0%
AGGTGGGGTTGGGGCCTGGG+GGG + chr1_1:17343599-17343618 Msa0011490:intron 75.0%
! GGCGGAGCCACCCCCCAGCT+AGG + chr1_1:17343287-17343306 Msa0011490:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 17332617 17355474 17332617 ID=Msa0011490;Name=Msa0011490
chr1_1 mRNA 17332617 17355474 17332617 ID=Msa0011490-mRNA-1;Parent=Msa0011490;Name=Msa0011490-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.61|0.35|1|0.76|0.64|14|0|892
chr1_1 exon 17332617 17332854 17332617 ID=Msa0011490-mRNA-1:exon:6298;Parent=Msa0011490-mRNA-1
chr1_1 exon 17334006 17334215 17334006 ID=Msa0011490-mRNA-1:exon:6299;Parent=Msa0011490-mRNA-1
chr1_1 exon 17334321 17334490 17334321 ID=Msa0011490-mRNA-1:exon:6300;Parent=Msa0011490-mRNA-1
chr1_1 exon 17335231 17335396 17335231 ID=Msa0011490-mRNA-1:exon:6301;Parent=Msa0011490-mRNA-1
chr1_1 exon 17335527 17335704 17335527 ID=Msa0011490-mRNA-1:exon:6302;Parent=Msa0011490-mRNA-1
chr1_1 exon 17341825 17342051 17341825 ID=Msa0011490-mRNA-1:exon:6303;Parent=Msa0011490-mRNA-1
chr1_1 exon 17344200 17344409 17344200 ID=Msa0011490-mRNA-1:exon:6304;Parent=Msa0011490-mRNA-1
chr1_1 exon 17344530 17344699 17344530 ID=Msa0011490-mRNA-1:exon:6305;Parent=Msa0011490-mRNA-1
chr1_1 exon 17344827 17345039 17344827 ID=Msa0011490-mRNA-1:exon:6306;Parent=Msa0011490-mRNA-1
chr1_1 exon 17349966 17350125 17349966 ID=Msa0011490-mRNA-1:exon:6307;Parent=Msa0011490-mRNA-1
chr1_1 exon 17354114 17354326 17354114 ID=Msa0011490-mRNA-1:exon:6308;Parent=Msa0011490-mRNA-1
chr1_1 exon 17354450 17354619 17354450 ID=Msa0011490-mRNA-1:exon:6309;Parent=Msa0011490-mRNA-1
chr1_1 exon 17354790 17354898 17354790 ID=Msa0011490-mRNA-1:exon:6310;Parent=Msa0011490-mRNA-1
chr1_1 exon 17355233 17355474 17355233 ID=Msa0011490-mRNA-1:exon:6311;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17332617 17332854 17332617 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17334006 17334215 17334006 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17334321 17334490 17334321 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17335231 17335396 17335231 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17335527 17335704 17335527 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17341825 17342051 17341825 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17344200 17344409 17344200 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17344530 17344699 17344530 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17344827 17345039 17344827 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17349966 17350125 17349966 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17354114 17354326 17354114 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17354450 17354619 17354450 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17354790 17354898 17354790 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
chr1_1 CDS 17355233 17355474 17355233 ID=Msa0011490-mRNA-1:cds;Parent=Msa0011490-mRNA-1
Gene Sequence

>Msa0011490

ATGTTTCATATATCAAGTGTATCATTTTTTGTGGTGTTATGTATAGCTACTACCACAGTGATTGAAAGTAGCAATAGTGAGTGCTATTTCCCTGCAATCTTCAACTTTGGTGACTCAAACTCAGACACTGGTGGCTTGGCTGCTTCCCTTCAAGCACCAACGCCACCATATGGAGAGACTTATTTCTACAGACCTAATGGGAGGTACTCTGATGGCCGTCTAATTGTCGATTTCATTGCTCAAAGTTTTGGACTCCCTTATCTAAGCGCATATCTTGATTCTTTGGGGACCAATTTTTCACATGGTGCAAACTTTGCAACATCAGCATCAACAATTAGACCCCCACCAAGTATTATACCTCAGGGTGGATTCAGTCCTTTCTACCTTGATGTCCAATACACTCAATTCAGAGATTTCAAACCTAGAACACAATTCATTAGACAACAAGGAGGATTATTTGCAAGTTTGATGCCCAAAGAAGAGTATTTCTCTAAGGCTTTGTACACATTTGATATTGGTCAAAATGATCTTGGTGCTGGCTTTTTTGGAAACATGACTATACAACAAGTAAATGCTTCTGTGCCAGAGATAATCAATAGTTTCTCCAAAAATGTTAAGGATGAAAATGGTTGTGCAAAGCAATATAATGAAGTAGCTCAATATTTCAATCATAAGTTGAAGGAAGCTGTCTTTAAACTTCGTGATGATCTTCCTTTAGCTGCAATCACATATGTAGATATCTACTCTGTTAAATATTCCCTTTTTAACAACCCAAAAAAATATGGATTTGAGCATCCCCTAGTTGTTTGTTGTGGCTATGGAGGAGAGTATAATTATAGCAATAGTGTTGGATGTGGAGGAACCATAGAGGTCAATGGTACTCAAATTTTTGTAGGTTCATGTGAAAGACCATCTGCAAGAGTGAATTGGGATGGAATTCATTACACTGAAGCAGCTAGCAATCACATGCCACTTGTGTCTTTGATTGTGCTTATTTTATGTACTACTGCTCCAATATCTGCCACAATTTTTTTCGATTGTCCTGCCATATTTAACTTTGGTGCTTCCAACGCTGATACTGGTGGTTTGGCTGCCGCCTTTCAAGCACTTCAGTTGCCAAACGGAGAGACTTTTTTCAATAGATCAACTGGAAGATTTTGTGATGGACGAATCATTCTTGATTTCATAGCACAGAGCTTTGGACTTCCCTTTCTTAGTCCATACCTTAATTCTCTAGGACCCAACTTCACACATGGTGCAAACTTTGCAACTGCAGCGTCAACAATCAAAATTCCTAATAGTATTATACCTAATGGAATGTTCAGTCCATTTTACCTTCGAATTCAGTACATTCAATTCAGAGATTTCATACCCAGAACAAAATTCATTAGGGATCAAGGAGGGGTATTTGCAACGTTGATCCCTAAAGAAGAATATTTTTCCAAAGCCTTGTACACATTTGATATTGGTCAAAATGATCTTACTGGTGGTTTTTTTGGTAATGCGACTATACAACAAATCAATGCTACTGTACCCGATATAGTAAACAATTTCATAGTGAATATAAAGAACATACACAGTTTAGGGGCAAGATCATTTTGGATACACAACACAGGGCCAATTGGTTGTCTTCCTTTAATTTTGGCTAATTTTCCATCTGCAATAAAGGATAGTTATGGTTGTGCAAAACAATACAATGAAGTATCTCAATATTTTAATTTAAAGTTGAAGGAAGCCCTAGCTCAACTTCGTAGTGATCTTCCTCTTGCTGCAATCGCATATAATTGTGATTTTCCTGCCATTTTTAACTTCGGTGCTTCAAACTCTGATACTGGTGGTTTGGCTGCTGCCTTTCGAGCACTGCCGTTACCATATGGTGAGACTTTTTTCAATAGATCATCTGGAAGATTTTCTGATGGTCGAATCATTCTTGATTTCATAGCACAAAGCTTTCGACTTCCCTATCTAAGTCCATATCTTGATTCTCTTGGGTCAAACTTCACACATGGTGCAAACTTTGCAACAGCAGGGTCAACGATCAAAATTCCTACTAGTAATATCATACCTAGTGGAATGTTTAGTCCATTTTCCCTTCAGGTTCAGTACATTCAATTCAAAGATTTCATACCTAAAACAAGGTTCATTAGGGATCAAGGAGGTGTATTTGCAACATTGATCCCCAAAGAAGATTATTATTCCAAAGCCTTATACACATTTGATATTGGTCAAAATGATCTTACTGCTGGATTTTTTGGTAATAAGACTATACAACAAGTCAACGCTACTGTACCCGATATAGTAAAGAATTTTATAGAGAATATCAAGAACATATACAATTTAGGGGCAAGGTCATTTTGGATACATAACACTGGACCAATTGGATGTGTACCTTTAATTTTGGCCAATTTTCCATCTGCTATAAAGGATAGTTATGGGTTTGAACTTCCACTAGTGGCTTGTTGTGGCAATGGAGGAAAGTACAACTATAACATTAGTGCTGGCTGTGGAGCAACCATAAACATAAATGGTACAAACACTGTTGTGGGTTCATGTAAAAAACCATCTACTAGAATAATATGGGATGGTACTCATTACACAGAGGCAGCTAACAAGATTGTCTTTGATCAAATCTCTACTGGAGCTTTTACAGATCCTCCCATTCCACTAAATAGGGCA
Protein sequence

>Msa0011490

MFHISSVSFFVVLCIATTTVIESSNSECYFPAIFNFGDSNSDTGGLAASLQAPTPPYGETYFYRPNGRYSDGRLIVDFIAQSFGLPYLSAYLDSLGTNFSHGANFATSASTIRPPPSIIPQGGFSPFYLDVQYTQFRDFKPRTQFIRQQGGLFASLMPKEEYFSKALYTFDIGQNDLGAGFFGNMTIQQVNASVPEIINSFSKNVKDENGCAKQYNEVAQYFNHKLKEAVFKLRDDLPLAAITYVDIYSVKYSLFNNPKKYGFEHPLVVCCGYGGEYNYSNSVGCGGTIEVNGTQIFVGSCERPSARVNWDGIHYTEAASNHMPLVSLIVLILCTTAPISATIFFDCPAIFNFGASNADTGGLAAAFQALQLPNGETFFNRSTGRFCDGRIILDFIAQSFGLPFLSPYLNSLGPNFTHGANFATAASTIKIPNSIIPNGMFSPFYLRIQYIQFRDFIPRTKFIRDQGGVFATLIPKEEYFSKALYTFDIGQNDLTGGFFGNATIQQINATVPDIVNNFIVNIKNIHSLGARSFWIHNTGPIGCLPLILANFPSAIKDSYGCAKQYNEVSQYFNLKLKEALAQLRSDLPLAAIAYNCDFPAIFNFGASNSDTGGLAAAFRALPLPYGETFFNRSSGRFSDGRIILDFIAQSFRLPYLSPYLDSLGSNFTHGANFATAGSTIKIPTSNIIPSGMFSPFSLQVQYIQFKDFIPKTRFIRDQGGVFATLIPKEDYYSKALYTFDIGQNDLTAGFFGNKTIQQVNATVPDIVKNFIENIKNIYNLGARSFWIHNTGPIGCVPLILANFPSAIKDSYGFELPLVACCGNGGKYNYNISAGCGATININGTNTVVGSCKKPSTRIIWDGTHYTEAANKIVFDQISTGAFTDPPIPLNRA