Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868570 | KEH17186.1 | 76.404 | 89 | 20 | 1 | 11 | 99 | 17 | 104 | 1.36e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868570 | A0A072TIY9 | 76.404 | 89 | 20 | 1 | 11 | 99 | 17 | 104 | 6.51e-38 | 135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa0868570 | 0.809286 | 2.039816e-50 | -8.615850e-47 |
| Msa0002700 | Msa0868570 | 0.806278 | 8.888764e-50 | -8.615850e-47 |
| Msa0021240 | Msa0868570 | 0.818878 | 1.557949e-52 | -8.615850e-47 |
| Msa0021570 | Msa0868570 | 0.810230 | 1.277912e-50 | -8.615850e-47 |
| Msa0024070 | Msa0868570 | 0.830427 | 2.954141e-55 | -8.615850e-47 |
| Msa0025340 | Msa0868570 | 0.809050 | 2.291772e-50 | -8.615850e-47 |
| Msa0027120 | Msa0868570 | 0.803460 | 3.449069e-49 | -8.615850e-47 |
| Msa0028410 | Msa0868570 | 0.800292 | 1.543542e-48 | -8.615850e-47 |
| Msa0028450 | Msa0868570 | 0.822363 | 2.466020e-53 | -8.615850e-47 |
| Msa0028940 | Msa0868570 | 0.825644 | 4.188797e-54 | -8.615850e-47 |
| Msa0029280 | Msa0868570 | 0.809264 | 2.061863e-50 | -8.615850e-47 |
| Msa0045530 | Msa0868570 | 0.808433 | 3.105061e-50 | -8.615850e-47 |
| Msa0046090 | Msa0868570 | 0.820452 | 6.809338e-53 | -8.615850e-47 |
| Msa0047400 | Msa0868570 | 0.806184 | 9.302917e-50 | -8.615850e-47 |
| Msa0058970 | Msa0868570 | 0.801140 | 1.036369e-48 | -8.615850e-47 |
| Msa0060720 | Msa0868570 | 0.802822 | 4.675624e-49 | -8.615850e-47 |
| Msa0067820 | Msa0868570 | 0.814292 | 1.659398e-51 | -8.615850e-47 |
| Msa0075080 | Msa0868570 | 0.803636 | 3.171748e-49 | -8.615850e-47 |
| Msa0076990 | Msa0868570 | 0.810919 | 9.072102e-51 | -8.615850e-47 |
| Msa0077990 | Msa0868570 | 0.819877 | 9.218146e-53 | -8.615850e-47 |
| Msa0087040 | Msa0868570 | 0.805353 | 1.391089e-49 | -8.615850e-47 |
| Msa0093830 | Msa0868570 | 0.818737 | 1.676499e-52 | -8.615850e-47 |
| Msa0097490 | Msa0868570 | 0.805155 | 1.530308e-49 | -8.615850e-47 |
| Msa0102290 | Msa0868570 | 0.817684 | 2.902380e-52 | -8.615850e-47 |
| Msa0113910 | Msa0868570 | 0.813761 | 2.173716e-51 | -8.615850e-47 |
| Msa0606230 | Msa0868570 | 0.803666 | 3.126397e-49 | -8.615850e-47 |
| Msa0616570 | Msa0868570 | 0.822906 | 1.843865e-53 | -8.615850e-47 |
| Msa0623350 | Msa0868570 | 0.832382 | 9.761131e-56 | -8.615850e-47 |
| Msa0624260 | Msa0868570 | 0.814093 | 1.836291e-51 | -8.615850e-47 |
| Msa0624360 | Msa0868570 | 0.815782 | 7.750536e-52 | -8.615850e-47 |
| Msa0625820 | Msa0868570 | 0.813312 | 2.728717e-51 | -8.615850e-47 |
| Msa0646310 | Msa0868570 | 0.807890 | 4.051169e-50 | -8.615850e-47 |
| Msa0649140 | Msa0868570 | 0.843574 | 1.288546e-58 | -8.615850e-47 |
| Msa0655980 | Msa0868570 | 0.814316 | 1.639633e-51 | -8.615850e-47 |
| Msa0660160 | Msa0868570 | 0.830290 | 3.191866e-55 | -8.615850e-47 |
| Msa0663540 | Msa0868570 | 0.812047 | 5.160656e-51 | -8.615850e-47 |
| Msa0663630 | Msa0868570 | 0.806919 | 6.509481e-50 | -8.615850e-47 |
| Msa0687650 | Msa0868570 | 0.800902 | 1.158804e-48 | -8.615850e-47 |
| Msa0694810 | Msa0868570 | 0.804975 | 1.669066e-49 | -8.615850e-47 |
| Msa0695470 | Msa0868570 | 0.811563 | 6.577581e-51 | -8.615850e-47 |
| Msa0699900 | Msa0868570 | 0.822165 | 2.741431e-53 | -8.615850e-47 |
| Msa0703620 | Msa0868570 | 0.815129 | 1.082796e-51 | -8.615850e-47 |
| Msa0708450 | Msa0868570 | 0.825279 | 5.111589e-54 | -8.615850e-47 |
| Msa0711510 | Msa0868570 | 0.817845 | 2.669986e-52 | -8.615850e-47 |
| Msa0748470 | Msa0868570 | 0.830002 | 3.753004e-55 | -8.615850e-47 |
| Msa0751640 | Msa0868570 | 0.801425 | 9.057954e-49 | -8.615850e-47 |
| Msa0772530 | Msa0868570 | 0.806853 | 6.724521e-50 | -8.615850e-47 |
| Msa0790380 | Msa0868570 | 0.814569 | 1.441235e-51 | -8.615850e-47 |
| Msa0791170 | Msa0868570 | 0.816289 | 5.970926e-52 | -8.615850e-47 |
| Msa0794300 | Msa0868570 | 0.810500 | 1.117764e-50 | -8.615850e-47 |
| Msa0796840 | Msa0868570 | 0.804678 | 1.925093e-49 | -8.615850e-47 |
| Msa0831710 | Msa0868570 | 0.824218 | 9.093886e-54 | -8.615850e-47 |
| Msa0837040 | Msa0868570 | 0.801802 | 7.581940e-49 | -8.615850e-47 |
| Msa0122930 | Msa0868570 | 0.801109 | 1.051219e-48 | -8.615850e-47 |
| Msa0124070 | Msa0868570 | 0.813650 | 2.298646e-51 | -8.615850e-47 |
| Msa0127110 | Msa0868570 | 0.828223 | 1.013302e-54 | -8.615850e-47 |
| Msa0141090 | Msa0868570 | 0.810694 | 1.014599e-50 | -8.615850e-47 |
| Msa0141770 | Msa0868570 | 0.804447 | 2.151342e-49 | -8.615850e-47 |
| Msa0145590 | Msa0868570 | 0.805843 | 1.097674e-49 | -8.615850e-47 |
| Msa0147070 | Msa0868570 | 0.830946 | 2.205017e-55 | -8.615850e-47 |
| Msa0151780 | Msa0868570 | 0.804251 | 2.363394e-49 | -8.615850e-47 |
| Msa0160080 | Msa0868570 | 0.811512 | 6.745418e-51 | -8.615850e-47 |
| Msa0163170 | Msa0868570 | 0.815549 | 8.734449e-52 | -8.615850e-47 |
| Msa0164530 | Msa0868570 | 0.801314 | 9.547378e-49 | -8.615850e-47 |
| Msa0168950 | Msa0868570 | 0.825277 | 5.118008e-54 | -8.615850e-47 |
| Msa0170550 | Msa0868570 | 0.835372 | 1.744144e-56 | -8.615850e-47 |
| Msa0181380 | Msa0868570 | 0.818016 | 2.442156e-52 | -8.615850e-47 |
| Msa0182940 | Msa0868570 | 0.811667 | 6.241414e-51 | -8.615850e-47 |
| Msa0185770 | Msa0868570 | 0.812814 | 3.508636e-51 | -8.615850e-47 |
| Msa0188670 | Msa0868570 | 0.815048 | 1.128660e-51 | -8.615850e-47 |
| Msa0195850 | Msa0868570 | 0.829024 | 6.485591e-55 | -8.615850e-47 |
| Msa0196620 | Msa0868570 | 0.833627 | 4.784177e-56 | -8.615850e-47 |
| Msa0224980 | Msa0868570 | 0.806559 | 7.755583e-50 | -8.615850e-47 |
| Msa0225030 | Msa0868570 | 0.804644 | 1.956303e-49 | -8.615850e-47 |
| Msa0231180 | Msa0868570 | 0.821454 | 4.003966e-53 | -8.615850e-47 |
| Msa0237690 | Msa0868570 | 0.815877 | 7.381491e-52 | -8.615850e-47 |
| Msa0371050 | Msa0868570 | 0.834067 | 3.714249e-56 | -8.615850e-47 |
| Msa0374400 | Msa0868570 | 0.820663 | 6.089744e-53 | -8.615850e-47 |
| Msa0374840 | Msa0868570 | 0.811167 | 8.017524e-51 | -8.615850e-47 |
| Msa0375100 | Msa0868570 | 0.815773 | 7.784118e-52 | -8.615850e-47 |
| Msa0376760 | Msa0868570 | 0.812107 | 5.007585e-51 | -8.615850e-47 |
| Msa0377990 | Msa0868570 | 0.807101 | 5.958440e-50 | -8.615850e-47 |
| Msa0378530 | Msa0868570 | 0.803056 | 4.182819e-49 | -8.615850e-47 |
| Msa0380470 | Msa0868570 | 0.811749 | 5.992412e-51 | -8.615850e-47 |
| Msa0383110 | Msa0868570 | 0.804385 | 2.215505e-49 | -8.615850e-47 |
| Msa0384570 | Msa0868570 | 0.820877 | 5.438479e-53 | -8.615850e-47 |
| Msa0388000 | Msa0868570 | 0.810687 | 1.018214e-50 | -8.615850e-47 |
| Msa0415060 | Msa0868570 | 0.807815 | 4.204208e-50 | -8.615850e-47 |
| Msa0429990 | Msa0868570 | 0.802090 | 6.617148e-49 | -8.615850e-47 |
| Msa0431310 | Msa0868570 | 0.821600 | 3.704008e-53 | -8.615850e-47 |
| Msa0436660 | Msa0868570 | 0.804765 | 1.846318e-49 | -8.615850e-47 |
| Msa0439090 | Msa0868570 | 0.813274 | 2.780379e-51 | -8.615850e-47 |
| Msa0439130 | Msa0868570 | 0.834372 | 3.112894e-56 | -8.615850e-47 |
| Msa0469700 | Msa0868570 | 0.805938 | 1.048211e-49 | -8.615850e-47 |
| Msa0471700 | Msa0868570 | 0.809855 | 1.539078e-50 | -8.615850e-47 |
| Msa0474220 | Msa0868570 | 0.808449 | 3.080476e-50 | -8.615850e-47 |
| Msa0475080 | Msa0868570 | 0.830328 | 3.125090e-55 | -8.615850e-47 |
| Msa0480040 | Msa0868570 | 0.808233 | 3.425778e-50 | -8.615850e-47 |
| Msa0246470 | Msa0868570 | 0.805183 | 1.509563e-49 | -8.615850e-47 |
| Msa0246510 | Msa0868570 | 0.809732 | 1.636192e-50 | -8.615850e-47 |
| Msa0269790 | Msa0868570 | 0.827232 | 1.752813e-54 | -8.615850e-47 |
| Msa0270230 | Msa0868570 | 0.823266 | 1.519039e-53 | -8.615850e-47 |
| Msa0275260 | Msa0868570 | 0.840894 | 6.603731e-58 | -8.615850e-47 |
| Msa0276030 | Msa0868570 | 0.812295 | 4.555972e-51 | -8.615850e-47 |
| Msa0284980 | Msa0868570 | 0.827176 | 1.807973e-54 | -8.615850e-47 |
| Msa0285510 | Msa0868570 | 0.802148 | 6.437511e-49 | -8.615850e-47 |
| Msa0288300 | Msa0868570 | 0.812089 | 5.052891e-51 | -8.615850e-47 |
| Msa0304070 | Msa0868570 | 0.819721 | 1.000853e-52 | -8.615850e-47 |
| Msa0305810 | Msa0868570 | 0.812560 | 3.986353e-51 | -8.615850e-47 |
| Msa0307820 | Msa0868570 | 0.820724 | 5.895577e-53 | -8.615850e-47 |
| Msa0315760 | Msa0868570 | 0.820674 | 6.054769e-53 | -8.615850e-47 |
| Msa0323790 | Msa0868570 | 0.804295 | 2.314040e-49 | -8.615850e-47 |
| Msa0341710 | Msa0868570 | 0.812123 | 4.966604e-51 | -8.615850e-47 |
| Msa0485350 | Msa0868570 | 0.809159 | 2.171954e-50 | -8.615850e-47 |
| Msa0500580 | Msa0868570 | 0.804095 | 2.546088e-49 | -8.615850e-47 |
| Msa0506740 | Msa0868570 | 0.801891 | 7.271020e-49 | -8.615850e-47 |
| Msa0508620 | Msa0868570 | 0.818653 | 1.752023e-52 | -8.615850e-47 |
| Msa0508660 | Msa0868570 | 0.820570 | 6.395203e-53 | -8.615850e-47 |
| Msa0515530 | Msa0868570 | 0.802064 | 6.699400e-49 | -8.615850e-47 |
| Msa0515580 | Msa0868570 | 0.802217 | 6.228778e-49 | -8.615850e-47 |
| Msa0517820 | Msa0868570 | 0.818132 | 2.299425e-52 | -8.615850e-47 |
| Msa0522510 | Msa0868570 | 0.815326 | 9.792438e-52 | -8.615850e-47 |
| Msa0527420 | Msa0868570 | 0.826319 | 2.895842e-54 | -8.615850e-47 |
| Msa0549700 | Msa0868570 | 0.803972 | 2.701023e-49 | -8.615850e-47 |
| Msa0552920 | Msa0868570 | 0.811420 | 7.063354e-51 | -8.615850e-47 |
| Msa0558220 | Msa0868570 | 0.810049 | 1.398251e-50 | -8.615850e-47 |
| Msa0562040 | Msa0868570 | 0.820065 | 8.349981e-53 | -8.615850e-47 |
| Msa0562740 | Msa0868570 | 0.820899 | 5.373941e-53 | -8.615850e-47 |
| Msa0565930 | Msa0868570 | 0.814897 | 1.219382e-51 | -8.615850e-47 |
| Msa0578400 | Msa0868570 | 0.812175 | 4.839267e-51 | -8.615850e-47 |
| Msa0583810 | Msa0868570 | 0.821846 | 3.250016e-53 | -8.615850e-47 |
| Msa0866650 | Msa0868570 | 0.805066 | 1.596820e-49 | -8.615850e-47 |
| Msa0868500 | Msa0868570 | 0.813495 | 2.486574e-51 | -8.615850e-47 |
| Msa0868510 | Msa0868570 | 0.807513 | 4.873629e-50 | -8.615850e-47 |
| Msa0868520 | Msa0868570 | 0.813356 | 2.667541e-51 | -8.615850e-47 |
| Msa0868550 | Msa0868570 | 0.959082 | 4.732987e-117 | -8.615850e-47 |
| Msa0868570 | Msa0880200 | 0.831605 | 1.518482e-55 | -8.615850e-47 |
| Msa0868570 | Msa0880370 | 0.806223 | 9.131850e-50 | -8.615850e-47 |
| Msa0868570 | Msa0929440 | 0.824735 | 6.872039e-54 | -8.615850e-47 |
| Msa0868570 | Msa0931410 | 0.806378 | 8.470425e-50 | -8.615850e-47 |
| Msa0868570 | Msa0933320 | 0.804260 | 2.352625e-49 | -8.615850e-47 |
| Msa0868570 | Msa0934100 | 0.800187 | 1.620993e-48 | -8.615850e-47 |
| Msa0868570 | Msa0934800 | 0.809735 | 1.633663e-50 | -8.615850e-47 |
| Msa0868570 | Msa0941410 | 0.822076 | 2.874845e-53 | -8.615850e-47 |
| Msa0868570 | Msa0941420 | 0.812348 | 4.436012e-51 | -8.615850e-47 |
| Msa0868570 | Msa0967890 | 0.805718 | 1.166204e-49 | -8.615850e-47 |
| Msa0868570 | Msa0967920 | 0.803936 | 2.748047e-49 | -8.615850e-47 |
| Msa0868570 | Msa0967940 | 0.810829 | 9.486486e-51 | -8.615850e-47 |
| Msa0868570 | Msa0971100 | 0.804636 | 1.964520e-49 | -8.615850e-47 |
| Msa0868570 | Msa0978540 | 0.816572 | 5.160384e-52 | -8.615850e-47 |
| Msa0868570 | Msa0978550 | 0.803976 | 2.696057e-49 | -8.615850e-47 |
| Msa0868570 | Msa0978560 | 0.811115 | 8.227202e-51 | -8.615850e-47 |
| Msa0868570 | Msa0985570 | 0.825283 | 5.101266e-54 | -8.615850e-47 |
| Msa0868570 | Msa1020160 | 0.801474 | 8.851728e-49 | -8.615850e-47 |
| Msa0868570 | Msa1031620 | 0.814798 | 1.282249e-51 | -8.615850e-47 |
| Msa0868570 | Msa1031650 | 0.806889 | 6.607572e-50 | -8.615850e-47 |
| Msa0868570 | Msa1033460 | 0.801970 | 7.003869e-49 | -8.615850e-47 |
| Msa0868570 | Msa1040030 | 0.811890 | 5.582724e-51 | -8.615850e-47 |
| Msa0868570 | Msa1047390 | 0.800408 | 1.461716e-48 | -8.615850e-47 |
| Msa0868570 | Msa1066830 | 0.800662 | 1.297585e-48 | -8.615850e-47 |
| Msa0868570 | Msa1066930 | 0.817398 | 3.366506e-52 | -8.615850e-47 |
| Msa0868570 | Msa1070710 | 0.825031 | 5.851609e-54 | -8.615850e-47 |
| Msa0868570 | Msa1095880 | 0.807811 | 4.212324e-50 | -8.615850e-47 |
| Msa0868570 | Msa1118870 | 0.816882 | 4.397543e-52 | -8.615850e-47 |
| Msa0868570 | Msa1118890 | 0.817125 | 3.878211e-52 | -8.615850e-47 |
| Msa0868570 | Msa1126980 | 0.820637 | 6.173611e-53 | -8.615850e-47 |
| Msa0868570 | Msa1127530 | 0.826361 | 2.830272e-54 | -8.615850e-47 |
| Msa0868570 | Msa1134800 | 0.815509 | 8.915165e-52 | -8.615850e-47 |
| Msa0868570 | Msa1134840 | 0.832729 | 8.005865e-56 | -8.615850e-47 |
| Msa0868570 | Msa1144470 | 0.800405 | 1.463854e-48 | -8.615850e-47 |
| Msa0868570 | Msa1154130 | 0.809622 | 1.727582e-50 | -8.615850e-47 |
| Msa0868570 | Msa1158540 | 0.815447 | 9.200189e-52 | -8.615850e-47 |
| Msa0868570 | Msa1165330 | 0.823009 | 1.743919e-53 | -8.615850e-47 |
| Msa0868570 | Msa1166020 | 0.803604 | 3.220182e-49 | -8.615850e-47 |
| Msa0868570 | Msa1175740 | 0.802819 | 4.682400e-49 | -8.615850e-47 |
| Msa0868570 | Msa1177300 | 0.825517 | 4.488948e-54 | -8.615850e-47 |
| Msa0868570 | Msa1190300 | 0.806374 | 8.487227e-50 | -8.615850e-47 |
| Msa0868570 | Msa1190670 | 0.826482 | 2.648601e-54 | -8.615850e-47 |
| Msa0868570 | Msa1197210 | 0.814865 | 1.238902e-51 | -8.615850e-47 |
| Msa0868570 | Msa1203320 | 0.809148 | 2.182996e-50 | -8.615850e-47 |
| Msa0868570 | Msa1211930 | 0.803062 | 4.169289e-49 | -8.615850e-47 |
| Msa0868570 | Msa1222900 | 0.807534 | 4.821952e-50 | -8.615850e-47 |
| Msa0868570 | Msa1223050 | 0.831864 | 1.310390e-55 | -8.615850e-47 |
| Msa0868570 | Msa1223520 | 0.837499 | 5.014865e-57 | -8.615850e-47 |
| Msa0868570 | Msa1223600 | 0.803036 | 4.223162e-49 | -8.615850e-47 |
| Msa0868570 | Msa1229880 | 0.806246 | 9.028001e-50 | -8.615850e-47 |
| Msa0868570 | Msa1235880 | 0.809470 | 1.862372e-50 | -8.615850e-47 |
| Msa0868570 | Msa1236090 | 0.833660 | 4.695071e-56 | -8.615850e-47 |
| Msa0868570 | Msa1244940 | 0.823099 | 1.661688e-53 | -8.615850e-47 |
| Msa0868570 | Msa1251890 | 0.808105 | 3.646540e-50 | -8.615850e-47 |
| Msa0868570 | Msa1257860 | 0.803800 | 2.932283e-49 | -8.615850e-47 |
| Msa0868570 | Msa1263460 | 0.811663 | 6.254188e-51 | -8.615850e-47 |
| Msa0868570 | Msa1263600 | 0.842354 | 2.721154e-58 | -8.615850e-47 |
| Msa0868570 | Msa1266750 | 0.803234 | 3.842885e-49 | -8.615850e-47 |
| Msa0868570 | Msa1302750 | 0.807710 | 4.425411e-50 | -8.615850e-47 |
| Msa0868570 | Msa1303040 | 0.802361 | 5.818149e-49 | -8.615850e-47 |
| Msa0868570 | Msa1307380 | 0.801825 | 7.501665e-49 | -8.615850e-47 |
| Msa0868570 | Msa1315990 | 0.832389 | 9.718136e-56 | -8.615850e-47 |
| Msa0868570 | Msa1317090 | 0.826338 | 2.865748e-54 | -8.615850e-47 |
| Msa0868570 | Msa1317340 | 0.802750 | 4.838447e-49 | -8.615850e-47 |
| Msa0868570 | Msa1325260 | 0.811766 | 5.941232e-51 | -8.615850e-47 |
| Msa0868570 | Msa1325270 | 0.803786 | 2.952352e-49 | -8.615850e-47 |
| Msa0868570 | Msa1331530 | 0.800579 | 1.349036e-48 | -8.615850e-47 |
| Msa0868570 | Msa1337950 | 0.805153 | 1.531716e-49 | -8.615850e-47 |
| Msa0868570 | Msa1371690 | 0.807989 | 3.860256e-50 | -8.615850e-47 |
| Msa0868570 | Msa1373340 | 0.801069 | 1.071514e-48 | -8.615850e-47 |
| Msa0868570 | Msa1374610 | 0.817126 | 3.876954e-52 | -8.615850e-47 |
| Msa0868570 | Msa1375120 | 0.803110 | 4.076969e-49 | -8.615850e-47 |
| Msa0868570 | Msa1376230 | 0.801029 | 1.091756e-48 | -8.615850e-47 |
| Msa0868570 | Msa1376510 | 0.809594 | 1.751963e-50 | -8.615850e-47 |
| Msa0868570 | Msa1387650 | 0.814170 | 1.765533e-51 | -8.615850e-47 |
| Msa0868570 | Msa1396310 | 0.804659 | 1.942801e-49 | -8.615850e-47 |
| Msa0868570 | Msa1403590 | 0.802353 | 5.839635e-49 | -8.615850e-47 |
| Msa0868570 | Msa1405990 | 0.831134 | 1.982776e-55 | -8.615850e-47 |
| Msa0868570 | Msa1412750 | 0.811090 | 8.328405e-51 | -8.615850e-47 |
| Msa0868570 | Msa1420130 | 0.803962 | 2.713677e-49 | -8.615850e-47 |
| Msa0868570 | Msa1428050 | 0.808612 | 2.842857e-50 | -8.615850e-47 |
| Msa0868570 | Msa1443280 | 0.817736 | 2.825412e-52 | -8.615850e-47 |
| Msa0868570 | Msa1444750 | 0.833225 | 6.025278e-56 | -8.615850e-47 |
| Msa0868570 | Msa1449510 | 0.807801 | 4.231780e-50 | -8.615850e-47 |
| Msa0868570 | Msa1462700 | 0.817451 | 3.274921e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 25 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTAATTATTGAGGATTT+TGG | 0.148562 | 6_1:+2143603 | Msa0868570:CDS |
| GCTGAATAAGATTCCTCTAT+TGG | 0.255868 | 6_1:+2143749 | Msa0868570:CDS |
| TCTTCAAATATATTAAGTTT+TGG | 0.295681 | 6_1:-2143660 | None:intergenic |
| CAAAGTTGTTTCTTCATTGT+TGG | 0.297204 | 6_1:-2143727 | None:intergenic |
| ACTTAGATTCAGAACATATC+AGG | 0.355882 | 6_1:+2143455 | Msa0868570:CDS |
| TTTGATCCAGATTTGTTACT+TGG | 0.376451 | 6_1:-2143937 | None:intergenic |
| GCCTGGTCTGTTAATTATTG+AGG | 0.400311 | 6_1:+2143596 | Msa0868570:CDS |
| AACACTCCAAGTAACAAATC+TGG | 0.416266 | 6_1:+2143931 | Msa0868570:CDS |
| AGCGACGTCAGCCTTGTCAT+TGG | 0.423496 | 6_1:-2143893 | None:intergenic |
| GGATCAATCAACGGGACATA+AGG | 0.431213 | 6_1:-2143639 | None:intergenic |
| TAGGGAAATGCCCGCCTGCC+TGG | 0.440332 | 6_1:+2143579 | Msa0868570:intron |
| GTCTCTATCGGAAGTGGCAT+TGG | 0.440777 | 6_1:-2143412 | None:intergenic |
| TTTGTTAAACTTACCAATAG+AGG | 0.443679 | 6_1:-2143762 | None:intergenic |
| GGAAGTGGCATTGGCTTGAA+TGG | 0.458677 | 6_1:-2143403 | None:intergenic |
| AAAGATGTCTCTATCGGAAG+TGG | 0.544294 | 6_1:-2143418 | None:intergenic |
| CAATCAACGGGACATAAGGT+TGG | 0.544757 | 6_1:-2143635 | None:intergenic |
| GTTGATAAAGATGTCTCTAT+CGG | 0.564645 | 6_1:-2143424 | None:intergenic |
| AATTAACAGACCAGGCAGGC+GGG | 0.580326 | 6_1:-2143589 | None:intergenic |
| CAATAATTAACAGACCAGGC+AGG | 0.599473 | 6_1:-2143593 | None:intergenic |
| GGTGATAATCGCAATTTACA+CGG | 0.601171 | 6_1:-2143381 | None:intergenic |
| GAAGTGGCATTGGCTTGAAT+GGG | 0.601775 | 6_1:-2143402 | None:intergenic |
| TCCTCAATAATTAACAGACC+AGG | 0.611424 | 6_1:-2143597 | None:intergenic |
| TAATTAACAGACCAGGCAGG+CGG | 0.628066 | 6_1:-2143590 | None:intergenic |
| ACTTGCAATGAAGAAGATGA+TGG | 0.638058 | 6_1:+2143699 | Msa0868570:CDS |
| ATGTAGTGATTCCAATGACA+AGG | 0.645229 | 6_1:+2143882 | Msa0868570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCATAATATTTAGATCA+AGG | - | chr6_1:2143539-2143558 | None:intergenic | 15.0% |
| !!! | TCTTCAAATATATTAAGTTT+TGG | - | chr6_1:2143663-2143682 | None:intergenic | 15.0% |
| !!! | AAAATGTGTATTTTTGTCAT+AGG | + | chr6_1:2143560-2143579 | Msa0868570:intron | 20.0% |
| !!! | AAATGTGTATTTTTGTCATA+GGG | + | chr6_1:2143561-2143580 | Msa0868570:intron | 20.0% |
| !! | CTGTTAATTATTGAGGATTT+TGG | + | chr6_1:2143603-2143622 | Msa0868570:CDS | 25.0% |
| !!! | TTAAGTTTTGGATCAATCAA+CGG | - | chr6_1:2143651-2143670 | None:intergenic | 25.0% |
| ! | TTTGTTAAACTTACCAATAG+AGG | - | chr6_1:2143765-2143784 | None:intergenic | 25.0% |
| ! | GTTGATAAAGATGTCTCTAT+CGG | - | chr6_1:2143427-2143446 | None:intergenic | 30.0% |
| ACTTAGATTCAGAACATATC+AGG | + | chr6_1:2143455-2143474 | Msa0868570:CDS | 30.0% | |
| GTTTAGAAAAACACTTACGT+TGG | - | chr6_1:2143496-2143515 | None:intergenic | 30.0% | |
| !!! | TAAGTTTTGGATCAATCAAC+GGG | - | chr6_1:2143650-2143669 | None:intergenic | 30.0% |
| !! | CAAAGTTGTTTCTTCATTGT+TGG | - | chr6_1:2143730-2143749 | None:intergenic | 30.0% |
| TAATACACCATACTATGTTC+AGG | + | chr6_1:2143849-2143868 | Msa0868570:intron | 30.0% | |
| !! | TTTGATCCAGATTTGTTACT+TGG | - | chr6_1:2143940-2143959 | None:intergenic | 30.0% |
| GGTGATAATCGCAATTTACA+CGG | - | chr6_1:2143384-2143403 | None:intergenic | 35.0% | |
| AGAAAAACACTTACGTTGGT+AGG | - | chr6_1:2143492-2143511 | None:intergenic | 35.0% | |
| TCCTCAATAATTAACAGACC+AGG | - | chr6_1:2143600-2143619 | None:intergenic | 35.0% | |
| ACTTGCAATGAAGAAGATGA+TGG | + | chr6_1:2143699-2143718 | Msa0868570:CDS | 35.0% | |
| GCTGAATAAGATTCCTCTAT+TGG | + | chr6_1:2143749-2143768 | Msa0868570:CDS | 35.0% | |
| ATAGCTTCCTGAACATAGTA+TGG | - | chr6_1:2143859-2143878 | None:intergenic | 35.0% | |
| ATGTAGTGATTCCAATGACA+AGG | + | chr6_1:2143882-2143901 | Msa0868570:CDS | 35.0% | |
| !! | ACTTGGAGTGTTTTCAATAC+TGG | - | chr6_1:2143923-2143942 | None:intergenic | 35.0% |
| AACACTCCAAGTAACAAATC+TGG | + | chr6_1:2143931-2143950 | Msa0868570:CDS | 35.0% | |
| AAAGATGTCTCTATCGGAAG+TGG | - | chr6_1:2143421-2143440 | None:intergenic | 40.0% | |
| CAATAATTAACAGACCAGGC+AGG | - | chr6_1:2143596-2143615 | None:intergenic | 40.0% | |
| GCCTGGTCTGTTAATTATTG+AGG | + | chr6_1:2143596-2143615 | Msa0868570:CDS | 40.0% | |
| !! | GAAGTGGCATTGGCTTGAAT+GGG | - | chr6_1:2143405-2143424 | None:intergenic | 45.0% |
| TAATTAACAGACCAGGCAGG+CGG | - | chr6_1:2143593-2143612 | None:intergenic | 45.0% | |
| CAATCAACGGGACATAAGGT+TGG | - | chr6_1:2143638-2143657 | None:intergenic | 45.0% | |
| GGATCAATCAACGGGACATA+AGG | - | chr6_1:2143642-2143661 | None:intergenic | 45.0% | |
| !! | GGAAGTGGCATTGGCTTGAA+TGG | - | chr6_1:2143406-2143425 | None:intergenic | 50.0% |
| GTCTCTATCGGAAGTGGCAT+TGG | - | chr6_1:2143415-2143434 | None:intergenic | 50.0% | |
| AATTAACAGACCAGGCAGGC+GGG | - | chr6_1:2143592-2143611 | None:intergenic | 50.0% | |
| ! | AGCGACGTCAGCCTTGTCAT+TGG | - | chr6_1:2143896-2143915 | None:intergenic | 55.0% |
| TAGGGAAATGCCCGCCTGCC+TGG | + | chr6_1:2143579-2143598 | Msa0868570:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 2143369 | 2143963 | 2143369 | ID=Msa0868570;Name=Msa0868570 |
| chr6_1 | mRNA | 2143369 | 2143963 | 2143369 | ID=Msa0868570-mRNA-1;Parent=Msa0868570;Name=Msa0868570-mRNA-1;_AED=0.34;_eAED=0.35;_QI=0|0|0|0.66|1|1|3|0|136 |
| chr6_1 | exon | 2143369 | 2143497 | 2143369 | ID=Msa0868570-mRNA-1:exon:604;Parent=Msa0868570-mRNA-1 |
| chr6_1 | exon | 2143582 | 2143770 | 2143582 | ID=Msa0868570-mRNA-1:exon:605;Parent=Msa0868570-mRNA-1 |
| chr6_1 | exon | 2143871 | 2143963 | 2143871 | ID=Msa0868570-mRNA-1:exon:606;Parent=Msa0868570-mRNA-1 |
| chr6_1 | CDS | 2143369 | 2143497 | 2143369 | ID=Msa0868570-mRNA-1:cds;Parent=Msa0868570-mRNA-1 |
| chr6_1 | CDS | 2143582 | 2143770 | 2143582 | ID=Msa0868570-mRNA-1:cds;Parent=Msa0868570-mRNA-1 |
| chr6_1 | CDS | 2143871 | 2143963 | 2143871 | ID=Msa0868570-mRNA-1:cds;Parent=Msa0868570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
