Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039550 | sp|Q9FJ82|DAPB3_ARATH | 74.671 | 304 | 69 | 4 | 1 | 302 | 1 | 298 | 7.77e-161 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014960 | Msa0039550 | 0.802190 | 6.310390e-49 | -8.615850e-47 |
| Msa0018610 | Msa0039550 | 0.805137 | 1.543317e-49 | -8.615850e-47 |
| Msa0021240 | Msa0039550 | 0.804543 | 2.054321e-49 | -8.615850e-47 |
| Msa0024070 | Msa0039550 | 0.824111 | 9.633242e-54 | -8.615850e-47 |
| Msa0032350 | Msa0039550 | 0.816341 | 5.812991e-52 | -8.615850e-47 |
| Msa0037300 | Msa0039550 | 0.814109 | 1.821002e-51 | -8.615850e-47 |
| Msa0039550 | Msa0042210 | 0.808048 | 3.750658e-50 | -8.615850e-47 |
| Msa0039550 | Msa0042240 | 0.807032 | 6.163150e-50 | -8.615850e-47 |
| Msa0039550 | Msa0044700 | 0.807470 | 4.975858e-50 | -8.615850e-47 |
| Msa0039550 | Msa0047400 | 0.811653 | 6.287317e-51 | -8.615850e-47 |
| Msa0039550 | Msa0052550 | 0.825771 | 3.908872e-54 | -8.615850e-47 |
| Msa0039550 | Msa0061060 | 0.800128 | 1.666404e-48 | -8.615850e-47 |
| Msa0039550 | Msa0064490 | 0.808605 | 2.852655e-50 | -8.615850e-47 |
| Msa0039550 | Msa0067820 | 0.814315 | 1.640418e-51 | -8.615850e-47 |
| Msa0039550 | Msa0075080 | 0.800721 | 1.261685e-48 | -8.615850e-47 |
| Msa0039550 | Msa0075820 | 0.819513 | 1.116779e-52 | -8.615850e-47 |
| Msa0039550 | Msa0076100 | 0.800063 | 1.718131e-48 | -8.615850e-47 |
| Msa0039550 | Msa0076590 | 0.801330 | 9.473075e-49 | -8.615850e-47 |
| Msa0039550 | Msa0085470 | 0.836887 | 7.188362e-57 | -8.615850e-47 |
| Msa0039550 | Msa0105500 | 0.805446 | 1.329461e-49 | -8.615850e-47 |
| Msa0039550 | Msa0113910 | 0.804918 | 1.715078e-49 | -8.615850e-47 |
| Msa0039550 | Msa0122170 | 0.805209 | 1.490956e-49 | -8.615850e-47 |
| Msa0039550 | Msa0122930 | 0.811802 | 5.834561e-51 | -8.615850e-47 |
| Msa0039550 | Msa0133390 | 0.801446 | 8.971058e-49 | -8.615850e-47 |
| Msa0039550 | Msa0138800 | 0.805173 | 1.516611e-49 | -8.615850e-47 |
| Msa0039550 | Msa0175210 | 0.831134 | 1.983099e-55 | -8.615850e-47 |
| Msa0039550 | Msa0178020 | 0.817646 | 2.959995e-52 | -8.615850e-47 |
| Msa0039550 | Msa0181560 | 0.808634 | 2.812157e-50 | -8.615850e-47 |
| Msa0039550 | Msa0184800 | 0.800742 | 1.249704e-48 | -8.615850e-47 |
| Msa0039550 | Msa0184900 | 0.805602 | 1.233285e-49 | -8.615850e-47 |
| Msa0039550 | Msa0188670 | 0.801128 | 1.041812e-48 | -8.615850e-47 |
| Msa0039550 | Msa0191180 | 0.806050 | 9.928726e-50 | -8.615850e-47 |
| Msa0039550 | Msa0198280 | 0.813824 | 2.104382e-51 | -8.615850e-47 |
| Msa0039550 | Msa0215510 | 0.823147 | 1.619657e-53 | -8.615850e-47 |
| Msa0039550 | Msa0216390 | 0.812614 | 3.881060e-51 | -8.615850e-47 |
| Msa0039550 | Msa0217300 | 0.802671 | 5.023527e-49 | -8.615850e-47 |
| Msa0039550 | Msa0224180 | 0.825240 | 5.220875e-54 | -8.615850e-47 |
| Msa0039550 | Msa0225080 | 0.802542 | 5.340734e-49 | -8.615850e-47 |
| Msa0039550 | Msa0233200 | 0.813919 | 2.005541e-51 | -8.615850e-47 |
| Msa0039550 | Msa0246470 | 0.802891 | 4.524575e-49 | -8.615850e-47 |
| Msa0039550 | Msa0246510 | 0.824582 | 7.465918e-54 | -8.615850e-47 |
| Msa0039550 | Msa0255770 | 0.821503 | 3.899926e-53 | -8.615850e-47 |
| Msa0039550 | Msa0256070 | 0.800984 | 1.114930e-48 | -8.615850e-47 |
| Msa0039550 | Msa0258410 | 0.800105 | 1.684907e-48 | -8.615850e-47 |
| Msa0039550 | Msa0259570 | 0.804119 | 2.516968e-49 | -8.615850e-47 |
| Msa0039550 | Msa0265440 | 0.804695 | 1.909701e-49 | -8.615850e-47 |
| Msa0039550 | Msa0266100 | 0.808223 | 3.442214e-50 | -8.615850e-47 |
| Msa0039550 | Msa0271970 | 0.802825 | 4.668489e-49 | -8.615850e-47 |
| Msa0039550 | Msa0280120 | 0.822239 | 2.634525e-53 | -8.615850e-47 |
| Msa0039550 | Msa0288300 | 0.816979 | 4.182400e-52 | -8.615850e-47 |
| Msa0039550 | Msa0288350 | 0.801205 | 1.004864e-48 | -8.615850e-47 |
| Msa0039550 | Msa0288360 | 0.806436 | 8.231903e-50 | -8.615850e-47 |
| Msa0039550 | Msa0322480 | 0.810768 | 9.779222e-51 | -8.615850e-47 |
| Msa0039550 | Msa0334280 | 0.816852 | 4.466624e-52 | -8.615850e-47 |
| Msa0039550 | Msa0335740 | 0.810898 | 9.166505e-51 | -8.615850e-47 |
| Msa0039550 | Msa0347280 | 0.846317 | 2.343566e-59 | -8.615850e-47 |
| Msa0039550 | Msa0369770 | 0.802026 | 6.819830e-49 | -8.615850e-47 |
| Msa0039550 | Msa0371010 | 0.821775 | 3.374294e-53 | -8.615850e-47 |
| Msa0039550 | Msa0371640 | 0.813468 | 2.520680e-51 | -8.615850e-47 |
| Msa0039550 | Msa0376760 | 0.800842 | 1.192413e-48 | -8.615850e-47 |
| Msa0039550 | Msa0377990 | 0.804245 | 2.369312e-49 | -8.615850e-47 |
| Msa0039550 | Msa0380470 | 0.802234 | 6.180589e-49 | -8.615850e-47 |
| Msa0039550 | Msa0390760 | 0.826085 | 3.292569e-54 | -8.615850e-47 |
| Msa0039550 | Msa0393880 | 0.832372 | 9.817288e-56 | -8.615850e-47 |
| Msa0039550 | Msa0398990 | 0.804820 | 1.797523e-49 | -8.615850e-47 |
| Msa0039550 | Msa0400880 | 0.838957 | 2.112088e-57 | -8.615850e-47 |
| Msa0039550 | Msa0400890 | 0.814435 | 1.542995e-51 | -8.615850e-47 |
| Msa0039550 | Msa0412470 | 0.810997 | 8.726752e-51 | -8.615850e-47 |
| Msa0039550 | Msa0415860 | 0.825580 | 4.337607e-54 | -8.615850e-47 |
| Msa0039550 | Msa0420100 | 0.813125 | 2.998150e-51 | -8.615850e-47 |
| Msa0039550 | Msa0428280 | 0.809028 | 2.316816e-50 | -8.615850e-47 |
| Msa0039550 | Msa0431550 | 0.808706 | 2.714225e-50 | -8.615850e-47 |
| Msa0039550 | Msa0441670 | 0.846096 | 2.691692e-59 | -8.615850e-47 |
| Msa0039550 | Msa0444340 | 0.825704 | 4.053911e-54 | -8.615850e-47 |
| Msa0039550 | Msa0447820 | 0.802448 | 5.584851e-49 | -8.615850e-47 |
| Msa0039550 | Msa0450920 | 0.807977 | 3.883048e-50 | -8.615850e-47 |
| Msa0039550 | Msa0457750 | 0.810484 | 1.126785e-50 | -8.615850e-47 |
| Msa0039550 | Msa0463980 | 0.806832 | 6.792659e-50 | -8.615850e-47 |
| Msa0039550 | Msa0466070 | 0.803907 | 2.785517e-49 | -8.615850e-47 |
| Msa0039550 | Msa0470080 | 0.806248 | 9.021131e-50 | -8.615850e-47 |
| Msa0039550 | Msa0474290 | 0.812137 | 4.932469e-51 | -8.615850e-47 |
| Msa0039550 | Msa0476140 | 0.804008 | 2.655007e-49 | -8.615850e-47 |
| Msa0039550 | Msa0476560 | 0.805383 | 1.370642e-49 | -8.615850e-47 |
| Msa0039550 | Msa0480430 | 0.803938 | 2.744515e-49 | -8.615850e-47 |
| Msa0039550 | Msa0485210 | 0.822677 | 2.084237e-53 | -8.615850e-47 |
| Msa0039550 | Msa0485260 | 0.810417 | 1.164974e-50 | -8.615850e-47 |
| Msa0039550 | Msa0485350 | 0.810755 | 9.845355e-51 | -8.615850e-47 |
| Msa0039550 | Msa0487860 | 0.802274 | 6.064696e-49 | -8.615850e-47 |
| Msa0039550 | Msa0489330 | 0.850540 | 1.590090e-60 | -8.615850e-47 |
| Msa0039550 | Msa0493550 | 0.808108 | 3.641764e-50 | -8.615850e-47 |
| Msa0039550 | Msa0504310 | 0.806861 | 6.697218e-50 | -8.615850e-47 |
| Msa0039550 | Msa0506700 | 0.800419 | 1.453861e-48 | -8.615850e-47 |
| Msa0039550 | Msa0506740 | 0.809173 | 2.156222e-50 | -8.615850e-47 |
| Msa0039550 | Msa0509530 | 0.802861 | 4.587812e-49 | -8.615850e-47 |
| Msa0039550 | Msa0511930 | 0.819804 | 9.582787e-53 | -8.615850e-47 |
| Msa0039550 | Msa0518720 | 0.817106 | 3.916474e-52 | -8.615850e-47 |
| Msa0039550 | Msa0519090 | 0.804210 | 2.409710e-49 | -8.615850e-47 |
| Msa0039550 | Msa0524960 | 0.813522 | 2.452583e-51 | -8.615850e-47 |
| Msa0039550 | Msa0538140 | 0.802473 | 5.516422e-49 | -8.615850e-47 |
| Msa0039550 | Msa0545350 | 0.812800 | 3.532545e-51 | -8.615850e-47 |
| Msa0039550 | Msa0566090 | 0.802033 | 6.796990e-49 | -8.615850e-47 |
| Msa0039550 | Msa0575670 | 0.842454 | 2.561021e-58 | -8.615850e-47 |
| Msa0039550 | Msa0578400 | 0.804364 | 2.238710e-49 | -8.615850e-47 |
| Msa0039550 | Msa0598980 | 0.815014 | 1.148468e-51 | -8.615850e-47 |
| Msa0039550 | Msa0606180 | 0.820392 | 7.028641e-53 | -8.615850e-47 |
| Msa0039550 | Msa0608720 | 0.810592 | 1.067922e-50 | -8.615850e-47 |
| Msa0039550 | Msa0619450 | 0.811336 | 7.368797e-51 | -8.615850e-47 |
| Msa0039550 | Msa0619870 | 0.803415 | 3.524236e-49 | -8.615850e-47 |
| Msa0039550 | Msa0620050 | 0.804629 | 1.971251e-49 | -8.615850e-47 |
| Msa0039550 | Msa0625850 | 0.812617 | 3.873655e-51 | -8.615850e-47 |
| Msa0039550 | Msa0644220 | 0.806882 | 6.627528e-50 | -8.615850e-47 |
| Msa0039550 | Msa0644630 | 0.818219 | 2.196954e-52 | -8.615850e-47 |
| Msa0039550 | Msa0646310 | 0.801572 | 8.450973e-49 | -8.615850e-47 |
| Msa0039550 | Msa0649140 | 0.815052 | 1.126414e-51 | -8.615850e-47 |
| Msa0039550 | Msa0653690 | 0.821346 | 4.239087e-53 | -8.615850e-47 |
| Msa0039550 | Msa0654560 | 0.819563 | 1.087506e-52 | -8.615850e-47 |
| Msa0039550 | Msa0659580 | 0.810206 | 1.293770e-50 | -8.615850e-47 |
| Msa0039550 | Msa0673620 | 0.808909 | 2.456973e-50 | -8.615850e-47 |
| Msa0039550 | Msa0677250 | 0.813471 | 2.517583e-51 | -8.615850e-47 |
| Msa0039550 | Msa0684030 | 0.810300 | 1.234274e-50 | -8.615850e-47 |
| Msa0039550 | Msa0693050 | 0.804601 | 1.997741e-49 | -8.615850e-47 |
| Msa0039550 | Msa0693150 | 0.819797 | 9.614623e-53 | -8.615850e-47 |
| Msa0039550 | Msa0704790 | 0.802459 | 5.553193e-49 | -8.615850e-47 |
| Msa0039550 | Msa0706300 | 0.810161 | 1.322691e-50 | -8.615850e-47 |
| Msa0039550 | Msa0706490 | 0.802747 | 4.844251e-49 | -8.615850e-47 |
| Msa0039550 | Msa0708380 | 0.815314 | 9.852852e-52 | -8.615850e-47 |
| Msa0039550 | Msa0729130 | 0.832984 | 6.920031e-56 | -8.615850e-47 |
| Msa0039550 | Msa0745010 | 0.812279 | 4.593471e-51 | -8.615850e-47 |
| Msa0039550 | Msa0752950 | 0.801255 | 9.815866e-49 | -8.615850e-47 |
| Msa0039550 | Msa0753040 | 0.816493 | 5.376394e-52 | -8.615850e-47 |
| Msa0039550 | Msa0755550 | 0.800815 | 1.207378e-48 | -8.615850e-47 |
| Msa0039550 | Msa0760950 | 0.804859 | 1.764601e-49 | -8.615850e-47 |
| Msa0039550 | Msa0775970 | 0.811338 | 7.359492e-51 | -8.615850e-47 |
| Msa0039550 | Msa0796840 | 0.803947 | 2.732917e-49 | -8.615850e-47 |
| Msa0039550 | Msa0823760 | 0.821588 | 3.727176e-53 | -8.615850e-47 |
| Msa0039550 | Msa0832270 | 0.802467 | 5.533167e-49 | -8.615850e-47 |
| Msa0039550 | Msa0833630 | 0.805290 | 1.433913e-49 | -8.615850e-47 |
| Msa0039550 | Msa0833980 | 0.806425 | 8.278766e-50 | -8.615850e-47 |
| Msa0039550 | Msa0837040 | 0.813295 | 2.751271e-51 | -8.615850e-47 |
| Msa0039550 | Msa0841570 | 0.816619 | 5.036581e-52 | -8.615850e-47 |
| Msa0039550 | Msa0855050 | 0.832719 | 8.050432e-56 | -8.615850e-47 |
| Msa0039550 | Msa0865500 | 0.807253 | 5.533035e-50 | -8.615850e-47 |
| Msa0039550 | Msa0866320 | 0.826474 | 2.659690e-54 | -8.615850e-47 |
| Msa0039550 | Msa0879820 | 0.805206 | 1.492774e-49 | -8.615850e-47 |
| Msa0039550 | Msa0880310 | 0.803866 | 2.840777e-49 | -8.615850e-47 |
| Msa0039550 | Msa0909540 | 0.807400 | 5.148049e-50 | -8.615850e-47 |
| Msa0039550 | Msa0911710 | 0.801032 | 1.090012e-48 | -8.615850e-47 |
| Msa0039550 | Msa0929440 | 0.800618 | 1.324630e-48 | -8.615850e-47 |
| Msa0039550 | Msa0932000 | 0.804505 | 2.092071e-49 | -8.615850e-47 |
| Msa0039550 | Msa0933320 | 0.814014 | 1.911291e-51 | -8.615850e-47 |
| Msa0039550 | Msa0934800 | 0.814989 | 1.163399e-51 | -8.615850e-47 |
| Msa0039550 | Msa0941420 | 0.800457 | 1.428229e-48 | -8.615850e-47 |
| Msa0039550 | Msa0959970 | 0.805081 | 1.585567e-49 | -8.615850e-47 |
| Msa0039550 | Msa0967890 | 0.801182 | 1.016085e-48 | -8.615850e-47 |
| Msa0039550 | Msa0967940 | 0.801180 | 1.016693e-48 | -8.615850e-47 |
| Msa0039550 | Msa0971100 | 0.809719 | 1.646756e-50 | -8.615850e-47 |
| Msa0039550 | Msa0978540 | 0.807048 | 6.113998e-50 | -8.615850e-47 |
| Msa0039550 | Msa0978560 | 0.802497 | 5.454077e-49 | -8.615850e-47 |
| Msa0039550 | Msa0985570 | 0.826583 | 2.504576e-54 | -8.615850e-47 |
| Msa0039550 | Msa0995130 | 0.812135 | 4.935891e-51 | -8.615850e-47 |
| Msa0039550 | Msa1022590 | 0.810157 | 1.325107e-50 | -8.615850e-47 |
| Msa0039550 | Msa1031620 | 0.803517 | 3.356230e-49 | -8.615850e-47 |
| Msa0039550 | Msa1033250 | 0.820430 | 6.889054e-53 | -8.615850e-47 |
| Msa0039550 | Msa1037440 | 0.807418 | 5.103419e-50 | -8.615850e-47 |
| Msa0039550 | Msa1072850 | 0.819715 | 1.003924e-52 | -8.615850e-47 |
| Msa0039550 | Msa1074980 | 0.840272 | 9.608189e-58 | -8.615850e-47 |
| Msa0039550 | Msa1076120 | 0.804040 | 2.614822e-49 | -8.615850e-47 |
| Msa0039550 | Msa1076530 | 0.814645 | 1.386664e-51 | -8.615850e-47 |
| Msa0039550 | Msa1082760 | 0.812751 | 3.621508e-51 | -8.615850e-47 |
| Msa0039550 | Msa1095880 | 0.843675 | 1.210927e-58 | -8.615850e-47 |
| Msa0039550 | Msa1113460 | 0.818986 | 1.471701e-52 | -8.615850e-47 |
| Msa0039550 | Msa1121290 | 0.800480 | 1.413065e-48 | -8.615850e-47 |
| Msa0039550 | Msa1128200 | 0.808261 | 3.377573e-50 | -8.615850e-47 |
| Msa0039550 | Msa1131300 | 0.802061 | 6.706520e-49 | -8.615850e-47 |
| Msa0039550 | Msa1149960 | 0.801198 | 1.008062e-48 | -8.615850e-47 |
| Msa0039550 | Msa1150170 | 0.802478 | 5.505267e-49 | -8.615850e-47 |
| Msa0039550 | Msa1156430 | 0.801514 | 8.687109e-49 | -8.615850e-47 |
| Msa0039550 | Msa1177960 | 0.800280 | 1.552258e-48 | -8.615850e-47 |
| Msa0039550 | Msa1190670 | 0.820968 | 5.182957e-53 | -8.615850e-47 |
| Msa0039550 | Msa1191960 | 0.811630 | 6.358059e-51 | -8.615850e-47 |
| Msa0039550 | Msa1196910 | 0.805627 | 1.218133e-49 | -8.615850e-47 |
| Msa0039550 | Msa1196990 | 0.810544 | 1.093429e-50 | -8.615850e-47 |
| Msa0039550 | Msa1203320 | 0.816979 | 4.181368e-52 | -8.615850e-47 |
| Msa0039550 | Msa1208630 | 0.818715 | 1.696483e-52 | -8.615850e-47 |
| Msa0039550 | Msa1208750 | 0.812372 | 4.382462e-51 | -8.615850e-47 |
| Msa0039550 | Msa1222900 | 0.829383 | 5.308718e-55 | -8.615850e-47 |
| Msa0039550 | Msa1225280 | 0.814914 | 1.208290e-51 | -8.615850e-47 |
| Msa0039550 | Msa1244940 | 0.810819 | 9.537397e-51 | -8.615850e-47 |
| Msa0039550 | Msa1250490 | 0.807263 | 5.505804e-50 | -8.615850e-47 |
| Msa0039550 | Msa1250500 | 0.801209 | 1.002981e-48 | -8.615850e-47 |
| Msa0039550 | Msa1264670 | 0.811430 | 7.027701e-51 | -8.615850e-47 |
| Msa0039550 | Msa1267560 | 0.804895 | 1.733961e-49 | -8.615850e-47 |
| Msa0039550 | Msa1269730 | 0.819359 | 1.210344e-52 | -8.615850e-47 |
| Msa0039550 | Msa1297490 | 0.811295 | 7.519263e-51 | -8.615850e-47 |
| Msa0039550 | Msa1297500 | 0.804655 | 1.946830e-49 | -8.615850e-47 |
| Msa0039550 | Msa1297550 | 0.829372 | 5.340937e-55 | -8.615850e-47 |
| Msa0039550 | Msa1297560 | 0.809814 | 1.571043e-50 | -8.615850e-47 |
| Msa0039550 | Msa1301610 | 0.809352 | 1.974589e-50 | -8.615850e-47 |
| Msa0039550 | Msa1312800 | 0.828438 | 8.990332e-55 | -8.615850e-47 |
| Msa0039550 | Msa1312840 | 0.832236 | 1.060451e-55 | -8.615850e-47 |
| Msa0039550 | Msa1325260 | 0.817580 | 3.064151e-52 | -8.615850e-47 |
| Msa0039550 | Msa1325270 | 0.803198 | 3.909026e-49 | -8.615850e-47 |
| Msa0039550 | Msa1331490 | 0.811447 | 6.968183e-51 | -8.615850e-47 |
| Msa0039550 | Msa1337950 | 0.803090 | 4.114500e-49 | -8.615850e-47 |
| Msa0039550 | Msa1346890 | 0.801541 | 8.577176e-49 | -8.615850e-47 |
| Msa0039550 | Msa1348180 | 0.801812 | 7.545015e-49 | -8.615850e-47 |
| Msa0039550 | Msa1375570 | 0.800060 | 1.720166e-48 | -8.615850e-47 |
| Msa0039550 | Msa1376560 | 0.805407 | 1.354847e-49 | -8.615850e-47 |
| Msa0039550 | Msa1388010 | 0.815107 | 1.094853e-51 | -8.615850e-47 |
| Msa0039550 | Msa1390330 | 0.837122 | 6.262309e-57 | -8.615850e-47 |
| Msa0039550 | Msa1400830 | 0.825428 | 4.712387e-54 | -8.615850e-47 |
| Msa0039550 | Msa1403820 | 0.807987 | 3.863856e-50 | -8.615850e-47 |
| Msa0039550 | Msa1411390 | 0.818661 | 1.744536e-52 | -8.615850e-47 |
| Msa0039550 | Msa1412750 | 0.809575 | 1.768458e-50 | -8.615850e-47 |
| Msa0039550 | Msa1412810 | 0.812348 | 4.435710e-51 | -8.615850e-47 |
| Msa0039550 | Msa1419620 | 0.804961 | 1.679957e-49 | -8.615850e-47 |
| Msa0039550 | Msa1426880 | 0.802440 | 5.603974e-49 | -8.615850e-47 |
| Msa0039550 | Msa1439880 | 0.815813 | 7.626112e-52 | -8.615850e-47 |
| Msa0039550 | Msa1452560 | 0.811815 | 5.796247e-51 | -8.615850e-47 |
| Msa0039550 | Msa1452800 | 0.801996 | 6.918608e-49 | -8.615850e-47 |
| Msa0039550 | Msa1453540 | 0.825392 | 4.807041e-54 | -8.615850e-47 |
| Msa0039550 | Msa1453900 | 0.807080 | 6.019741e-50 | -8.615850e-47 |
| Msa0039550 | Msa1455560 | 0.815029 | 1.139523e-51 | -8.615850e-47 |
| Msa0039550 | Msa1462700 | 0.809759 | 1.614107e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039550 | MtrunA17_Chr1g0203761 | 98.344 | 302 | 5 | 0 | 1 | 302 | 1 | 302 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039550 | AT5G52100.1 | 74.671 | 304 | 69 | 4 | 1 | 302 | 1 | 298 | 7.90e-162 | 452 |
Find 106 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATTTCGTTGTTATTTC+TGG | 0.119620 | 1_1:-69259795 | Msa0039550:three_prime_UTR |
| TCTGATACCATCGTAAAATT+TGG | 0.159532 | 1_1:+69259920 | None:intergenic |
| GTGGAACAGGTTGTAATAAA+TGG | 0.191487 | 1_1:-69262564 | Msa0039550:intron |
| TAGAGAGATTGTTAGCTATT+TGG | 0.225312 | 1_1:+69261181 | None:intergenic |
| AATTTCTGTTATGTCACTTT+AGG | 0.231759 | 1_1:+69259625 | None:intergenic |
| TACATAGGCTTATCTTCTTT+TGG | 0.253039 | 1_1:-69262817 | Msa0039550:five_prime_UTR |
| CAATTTCGACGTTGCGGTAA+TGG | 0.296694 | 1_1:+69261414 | None:intergenic |
| ATCTGTTATATCATGTTTGA+TGG | 0.310089 | 1_1:+69260448 | None:intergenic |
| TTGAGAATTCAAGTAGTTGA+TGG | 0.320100 | 1_1:+69262746 | None:intergenic |
| GTACGTGCCGCGAATCAAAT+TGG | 0.334262 | 1_1:-69261749 | Msa0039550:CDS |
| AATGGAGCAGCAAAGGAAAT+AGG | 0.336907 | 1_1:-69262546 | Msa0039550:CDS |
| TCTTAAACTTGATACACTAA+TGG | 0.344826 | 1_1:-69259688 | Msa0039550:three_prime_UTR |
| CAAGGCAAGAGGTCAAGTTT+TGG | 0.347148 | 1_1:-69261015 | Msa0039550:intron |
| TTCTTGAAGAACTTAGTATA+CGG | 0.352631 | 1_1:-69260278 | Msa0039550:intron |
| CAACATGTTGGGGAAGATAT+TGG | 0.357960 | 1_1:-69262459 | Msa0039550:CDS |
| GACTACAACCGCTGTGGCCT+TGG | 0.364137 | 1_1:+69262117 | None:intergenic |
| AGCAATCAATTTAGCCAGTT+AGG | 0.381340 | 1_1:-69260016 | Msa0039550:three_prime_UTR |
| ACTATATAGGCAACAGCATT+TGG | 0.384690 | 1_1:-69261787 | Msa0039550:intron |
| CTGATACCATCGTAAAATTT+GGG | 0.389704 | 1_1:+69259921 | None:intergenic |
| AATGACCTTACTATGGTCTT+AGG | 0.392772 | 1_1:-69262260 | Msa0039550:CDS |
| TCAGTAGAGTGCAAGTCTTT+TGG | 0.396806 | 1_1:-69259894 | Msa0039550:three_prime_UTR |
| CAAATATCATAGACAAGGTT+TGG | 0.397899 | 1_1:-69260177 | Msa0039550:three_prime_UTR |
| CATATGCTAATGCTACCTTT+TGG | 0.398579 | 1_1:-69260235 | Msa0039550:three_prime_UTR |
| TTGTACAAGGCATTCCTAAC+TGG | 0.401115 | 1_1:+69260002 | None:intergenic |
| ACCTGTACAAAGCAATATAA+AGG | 0.403809 | 1_1:-69262676 | Msa0039550:intron |
| TGGAATTCGCGTGCACAGTT+TGG | 0.408268 | 1_1:-69260988 | Msa0039550:CDS |
| CTATTGATACTCAACATGTT+GGG | 0.408524 | 1_1:-69262470 | Msa0039550:CDS |
| CTGTAATAATATTGATCCTA+TGG | 0.411160 | 1_1:+69261460 | None:intergenic |
| AGTAGTTGATGGAATGAAAC+TGG | 0.415845 | 1_1:+69262757 | None:intergenic |
| TCACCCCTTGCTCACCATGC+TGG | 0.432175 | 1_1:+69261690 | None:intergenic |
| GCCAGAGGAATGGAAGTTGC+TGG | 0.433583 | 1_1:-69262495 | Msa0039550:CDS |
| AGTATATGACAATGTAAAAC+AGG | 0.435138 | 1_1:-69262074 | Msa0039550:intron |
| TGTCACTTTAGGATGGATTA+CGG | 0.436556 | 1_1:+69259636 | None:intergenic |
| ACCTTTATATTGCTTTGTAC+AGG | 0.439556 | 1_1:+69262675 | None:intergenic |
| GTTAAATTCAAGCGACTCAC+TGG | 0.440125 | 1_1:-69260213 | Msa0039550:three_prime_UTR |
| TCTTACATTTGCATTAGCCT+TGG | 0.441213 | 1_1:+69261385 | None:intergenic |
| GTCGCTTGAATTTAACCAAA+AGG | 0.448640 | 1_1:+69260220 | None:intergenic |
| TCCAGCAACTTCCATTCCTC+TGG | 0.450267 | 1_1:+69262494 | None:intergenic |
| TATACTAAATGACCTTACTA+TGG | 0.454237 | 1_1:-69262267 | Msa0039550:CDS |
| CAACTACTTGAATTCTCAAA+TGG | 0.460268 | 1_1:-69262742 | Msa0039550:CDS |
| TTGTACAGGTTGTGCTGTGC+AGG | 0.466555 | 1_1:+69262689 | None:intergenic |
| TAGTCCAATGGGAAACTTGT+GGG | 0.479872 | 1_1:+69259758 | None:intergenic |
| ATTTGGTTTGCTTCTGCAGA+TGG | 0.483994 | 1_1:+69261198 | None:intergenic |
| CTAATGGCTAATAGCAAGCC+TGG | 0.489682 | 1_1:+69260410 | None:intergenic |
| GCTATTGATACTCAACATGT+TGG | 0.498878 | 1_1:-69262471 | Msa0039550:CDS |
| AGATTCCTCAACAGATGTCT+TGG | 0.500873 | 1_1:-69261133 | Msa0039550:intron |
| GGAATGAAACTGGCAGCTTA+AGG | 0.502410 | 1_1:+69262767 | None:intergenic |
| GGTCTTAGGCTCTATATCTC+AGG | 0.502826 | 1_1:-69262246 | Msa0039550:intron |
| ACCGTATCCAATTTGATTCG+CGG | 0.504701 | 1_1:+69261742 | None:intergenic |
| GTTGCTCCAACGCTTTCCAT+AGG | 0.508224 | 1_1:-69261476 | Msa0039550:CDS |
| GACACAGATATAGCTTGAGC+TGG | 0.509167 | 1_1:+69262846 | None:intergenic |
| ATTCCCCACAAGTTTCCCAT+TGG | 0.509647 | 1_1:-69259762 | Msa0039550:three_prime_UTR |
| AGGATCAATATTATTACAGC+AGG | 0.513741 | 1_1:-69261456 | Msa0039550:CDS |
| CACGGAGACTTGAGCAGCAA+TGG | 0.518042 | 1_1:-69262793 | Msa0039550:exon |
| TTACCGCAACGTCGAAATTG+TGG | 0.519053 | 1_1:-69261411 | Msa0039550:CDS |
| ATAGTAAGGTCATTTAGTAT+AGG | 0.525371 | 1_1:+69262269 | None:intergenic |
| ACATTGTCATATACTGCAGA+AGG | 0.525891 | 1_1:+69262082 | None:intergenic |
| AATGTGTGTGGAGAGAAATT+CGG | 0.526610 | 1_1:+69260130 | None:intergenic |
| GAACGAAATGATAGTCCAAT+GGG | 0.528323 | 1_1:+69259747 | None:intergenic |
| TGTAATAAATGGAGCAGCAA+AGG | 0.530888 | 1_1:-69262553 | Msa0039550:CDS |
| GTTGTTATTTCTGGTGATGT+CGG | 0.532835 | 1_1:-69259786 | Msa0039550:three_prime_UTR |
| ACTACAATGACAGGGTGTCT+TGG | 0.534483 | 1_1:-69261498 | Msa0039550:intron |
| TTTCATATAGCTTTGTGGCA+TGG | 0.535762 | 1_1:-69262309 | Msa0039550:intron |
| TATGATATTTGTCAACAAGC+TGG | 0.541742 | 1_1:+69260189 | None:intergenic |
| TCTGTTATGTCACTTTAGGA+TGG | 0.544278 | 1_1:+69259629 | None:intergenic |
| CGTCGAAATTGTGGAATCCA+AGG | 0.546529 | 1_1:-69261402 | Msa0039550:CDS |
| TTATGACATTAGATTGTACA+AGG | 0.549159 | 1_1:+69259989 | None:intergenic |
| TGTTGGGGAAGATATTGGAC+AGG | 0.558324 | 1_1:-69262454 | Msa0039550:intron |
| TGAACGAAATGATAGTCCAA+TGG | 0.561744 | 1_1:+69259746 | None:intergenic |
| GCAGTTGTTATACTTATACA+AGG | 0.563307 | 1_1:+69259592 | None:intergenic |
| TAGAGCCTAAGACCATAGTA+AGG | 0.569430 | 1_1:+69262255 | None:intergenic |
| GCTAACAATCTCTCTAACCT+CGG | 0.569443 | 1_1:-69261174 | Msa0039550:CDS |
| ATTGATCCTATGGAAAGCGT+TGG | 0.571844 | 1_1:+69261470 | None:intergenic |
| GATGTACAATGTCTCATGCC+AGG | 0.572407 | 1_1:-69260428 | Msa0039550:CDS |
| AGCGGTATTAGCTGTGACAA+AGG | 0.574348 | 1_1:-69262517 | Msa0039550:CDS |
| AAGTGAACTGTTGTACTAGA+GGG | 0.580769 | 1_1:+69260951 | None:intergenic |
| GAAGAACTTAGTATACGGCT+TGG | 0.581279 | 1_1:-69260273 | Msa0039550:intron |
| GCCGCGAATCAAATTGGATA+CGG | 0.582539 | 1_1:-69261743 | Msa0039550:CDS |
| CCTTACCAAGACATCTGTTG+AGG | 0.586781 | 1_1:+69261128 | None:intergenic |
| ATCTGTGTCACAAAATACAT+AGG | 0.586894 | 1_1:-69262832 | Msa0039550:five_prime_UTR |
| TAGAAAAGTCGTGCGCCTCA+AGG | 0.587387 | 1_1:-69260390 | Msa0039550:intron |
| AAAGTGAACTGTTGTACTAG+AGG | 0.590884 | 1_1:+69260950 | None:intergenic |
| TGTGACAAAGGCCAGAGGAA+TGG | 0.593244 | 1_1:-69262505 | Msa0039550:CDS |
| GTTGTACTAGAGGGAAGCCC+TGG | 0.594961 | 1_1:+69260960 | None:intergenic |
| ACCATCGTAAAATTTGGGTA+GGG | 0.596919 | 1_1:+69259926 | None:intergenic |
| TATTGATACTCAACATGTTG+GGG | 0.603145 | 1_1:-69262469 | Msa0039550:CDS |
| TTTAGTATAGGTATTTCAAG+AGG | 0.603621 | 1_1:+69262281 | None:intergenic |
| TACCATCGTAAAATTTGGGT+AGG | 0.604041 | 1_1:+69259925 | None:intergenic |
| ATTGTCTGCATTCTGTGAGA+AGG | 0.615005 | 1_1:-69261713 | Msa0039550:CDS |
| ATTCCACAATTTCGACGTTG+CGG | 0.630579 | 1_1:+69261408 | None:intergenic |
| CATTGTCATATACTGCAGAA+GGG | 0.632959 | 1_1:+69262083 | None:intergenic |
| ACACAGATATAGCTTGAGCT+GGG | 0.635408 | 1_1:+69262847 | None:intergenic |
| AGTAATGTGTAAGTCTCTTG+TGG | 0.640274 | 1_1:-69259820 | Msa0039550:three_prime_UTR |
| ATATCACATGACAAGGCAAG+AGG | 0.642848 | 1_1:-69261026 | Msa0039550:intron |
| CTCTGTTATAGATTTGACCG+AGG | 0.649127 | 1_1:+69261157 | None:intergenic |
| GTGTGTGGAGAGAAATTCGG+AGG | 0.650566 | 1_1:+69260133 | None:intergenic |
| GTTCAGAATGATAATGTGTG+TGG | 0.651845 | 1_1:+69260118 | None:intergenic |
| AGTCCAATGGGAAACTTGTG+GGG | 0.654677 | 1_1:+69259759 | None:intergenic |
| AAAGGAAATAGGAAGAGCAG+CGG | 0.654803 | 1_1:-69262535 | Msa0039550:CDS |
| GTTGACAAATATCATAGACA+AGG | 0.661172 | 1_1:-69260182 | Msa0039550:three_prime_UTR |
| ATAGTCCAATGGGAAACTTG+TGG | 0.661846 | 1_1:+69259757 | None:intergenic |
| ATTCTGTGAGAAGGCCAGCA+TGG | 0.689417 | 1_1:-69261704 | Msa0039550:intron |
| GAGTTGGATCTAATTCAACA+AGG | 0.694091 | 1_1:+69259860 | None:intergenic |
| TTTGCAGTCCAAGGCCACAG+CGG | 0.725554 | 1_1:-69262125 | Msa0039550:intron |
| TTAGCTGTGACAAAGGCCAG+AGG | 0.735270 | 1_1:-69262510 | Msa0039550:CDS |
| GAAATCGACTACAACCGCTG+TGG | 0.746133 | 1_1:+69262111 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAGCATTTAAATTAA+CGG | - | chr1_1:69260115-69260134 | Msa0039550:three_prime_UTR | 10.0% |
| !! | CTATATGAAAATAAAAAATT+AGG | + | chr1_1:69260143-69260162 | None:intergenic | 10.0% |
| !! | ATATAAGCATTTAAATTAAC+GGG | - | chr1_1:69260116-69260135 | Msa0039550:three_prime_UTR | 15.0% |
| !!! | ATGAAGAATTTTTATTTCAT+TGG | - | chr1_1:69261747-69261766 | Msa0039550:CDS | 15.0% |
| !! | GTTATTTGACAAAAAATATT+TGG | + | chr1_1:69261802-69261821 | None:intergenic | 15.0% |
| !!! | ACATATTTTAAAAATTGAGT+TGG | + | chr1_1:69262621-69262640 | None:intergenic | 15.0% |
| !!! | AAAGTGTTGAATTTTGAAAA+TGG | + | chr1_1:69259826-69259845 | None:intergenic | 20.0% |
| !! | TATAAGCATTTAAATTAACG+GGG | - | chr1_1:69260117-69260136 | Msa0039550:three_prime_UTR | 20.0% |
| !!! | TTTATTTTCATATAGCTTTG+TGG | - | chr1_1:69260148-69260167 | Msa0039550:three_prime_UTR | 20.0% |
| !! | AAGTTGAAGTGTAAATTAAA+TGG | - | chr1_1:69260462-69260481 | Msa0039550:intron | 20.0% |
| !!! | ATTCTTAAAGCAATTTTTCA+TGG | - | chr1_1:69260518-69260537 | Msa0039550:intron | 20.0% |
| !! | TTATAGTTTCAGAACTAAAT+TGG | + | chr1_1:69261594-69261613 | None:intergenic | 20.0% |
| !!! | TTTAACTTCATGAATCATTT+TGG | + | chr1_1:69261652-69261671 | None:intergenic | 20.0% |
| !!! | AAATTAGTCATTTTTTGAGT+TGG | + | chr1_1:69261725-69261744 | None:intergenic | 20.0% |
| !! | AACTCAAAAAATGACTAATT+TGG | - | chr1_1:69261724-69261743 | Msa0039550:CDS | 20.0% |
| !! | ATTGTAGGAATAAAACAATT+TGG | + | chr1_1:69261940-69261959 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTAAGAGTGCTTA+TGG | - | chr1_1:69260031-69260050 | Msa0039550:three_prime_UTR | 25.0% |
| ! | TTTAGTATAGGTATTTCAAG+AGG | + | chr1_1:69260184-69260203 | None:intergenic | 25.0% |
| ! | ATAGTAAGGTCATTTAGTAT+AGG | + | chr1_1:69260196-69260215 | None:intergenic | 25.0% |
| ! | TATACTAAATGACCTTACTA+TGG | - | chr1_1:69260195-69260214 | Msa0039550:three_prime_UTR | 25.0% |
| ! | TGAATTAGCAATAACAAACT+TGG | - | chr1_1:69260252-69260271 | Msa0039550:exon | 25.0% |
| ! | AGTATATGACAATGTAAAAC+AGG | - | chr1_1:69260388-69260407 | Msa0039550:intron | 25.0% |
| ! | ACTTCAACTTAAATGCATAT+TGG | + | chr1_1:69260452-69260471 | None:intergenic | 25.0% |
| ! | AGTGTAAATTAAATGGTTCT+TGG | - | chr1_1:69260469-69260488 | Msa0039550:intron | 25.0% |
| ! | CATAATATAGTCTTCAATCT+TGG | + | chr1_1:69260579-69260598 | None:intergenic | 25.0% |
| !! | TTGTTTCTTCTTCACTATAT+AGG | - | chr1_1:69260662-69260681 | Msa0039550:intron | 25.0% |
| ! | TAGAGTATGAAATAACTGAA+GGG | + | chr1_1:69260878-69260897 | None:intergenic | 25.0% |
| !!! | CTAAACCATTTGTTCTTTTT+TGG | - | chr1_1:69260931-69260950 | Msa0039550:intron | 25.0% |
| ! | AAATGCCAAAAAAGAACAAA+TGG | + | chr1_1:69260939-69260958 | None:intergenic | 25.0% |
| !!! | ATTTGTTCTTTTTTGGCATT+TGG | - | chr1_1:69260938-69260957 | Msa0039550:CDS | 25.0% |
| ! | CTGTAATAATATTGATCCTA+TGG | + | chr1_1:69261005-69261024 | None:intergenic | 25.0% |
| ! | CTAACTAGTGTAACAAAATT+TGG | + | chr1_1:69261164-69261183 | None:intergenic | 25.0% |
| ! | CATTTATATATCACATGACA+AGG | - | chr1_1:69261429-69261448 | Msa0039550:CDS | 25.0% |
| ! | GTTTCAAAAATTGTCTCAAA+AGG | + | chr1_1:69261694-69261713 | None:intergenic | 25.0% |
| ! | TACACTACTAATGAAATTGT+AGG | + | chr1_1:69261955-69261974 | None:intergenic | 25.0% |
| ! | ATCTGTTATATCATGTTTGA+TGG | + | chr1_1:69262017-69262036 | None:intergenic | 25.0% |
| ! | AGTTCTTCAAGAATGATAAA+GGG | + | chr1_1:69262177-69262196 | None:intergenic | 25.0% |
| ! | AAGTTCTTCAAGAATGATAA+AGG | + | chr1_1:69262178-69262197 | None:intergenic | 25.0% |
| ! | TTCTTGAAGAACTTAGTATA+CGG | - | chr1_1:69262184-69262203 | Msa0039550:intron | 25.0% |
| !! | TCATTCATCTTTTACACAAA+GGG | - | chr1_1:69262419-69262438 | Msa0039550:intron | 25.0% |
| ! | TTATGACATTAGATTGTACA+AGG | + | chr1_1:69262476-69262495 | None:intergenic | 25.0% |
| !!! | GTTTATTTCGTTGTTATTTC+TGG | - | chr1_1:69262667-69262686 | Msa0039550:intron | 25.0% |
| ! | TCTTAAACTTGATACACTAA+TGG | - | chr1_1:69262774-69262793 | Msa0039550:CDS | 25.0% |
| !!! | AATTTCTGTTATGTCACTTT+AGG | + | chr1_1:69262840-69262859 | None:intergenic | 25.0% |
| ATCTGTGTCACAAAATACAT+AGG | - | chr1_1:69259630-69259649 | Msa0039550:three_prime_UTR | 30.0% | |
| ! | TACATAGGCTTATCTTCTTT+TGG | - | chr1_1:69259645-69259664 | Msa0039550:three_prime_UTR | 30.0% |
| TTGAGAATTCAAGTAGTTGA+TGG | + | chr1_1:69259719-69259738 | None:intergenic | 30.0% | |
| CAACTACTTGAATTCTCAAA+TGG | - | chr1_1:69259720-69259739 | Msa0039550:three_prime_UTR | 30.0% | |
| ACCTGTACAAAGCAATATAA+AGG | - | chr1_1:69259786-69259805 | Msa0039550:three_prime_UTR | 30.0% | |
| ACCTTTATATTGCTTTGTAC+AGG | + | chr1_1:69259790-69259809 | None:intergenic | 30.0% | |
| ! | TCAATTTTCAACACCTTTTG+TGG | - | chr1_1:69259879-69259898 | Msa0039550:three_prime_UTR | 30.0% |
| CTATTGATACTCAACATGTT+GGG | - | chr1_1:69259992-69260011 | Msa0039550:three_prime_UTR | 30.0% | |
| TATTGATACTCAACATGTTG+GGG | - | chr1_1:69259993-69260012 | Msa0039550:three_prime_UTR | 30.0% | |
| !! | TTTAAGAGTGCTTATGGAAA+TGG | - | chr1_1:69260037-69260056 | Msa0039550:three_prime_UTR | 30.0% |
| TGTAAAACAGGTTTGAATTC+TGG | - | chr1_1:69260400-69260419 | Msa0039550:CDS | 30.0% | |
| AAGACTGAGAGTTTATTTAG+TGG | - | chr1_1:69260494-69260513 | Msa0039550:intron | 30.0% | |
| AGACTGAGAGTTTATTTAGT+GGG | - | chr1_1:69260495-69260514 | Msa0039550:intron | 30.0% | |
| ! | AAGCAATTTTTCATGGCTAA+AGG | - | chr1_1:69260525-69260544 | Msa0039550:intron | 30.0% |
| AGTGAAGAAGAAACAATCAA+TGG | + | chr1_1:69260658-69260677 | None:intergenic | 30.0% | |
| CTAGAGTATGAAATAACTGA+AGG | + | chr1_1:69260879-69260898 | None:intergenic | 30.0% | |
| ATTTGGTTAACTACAATGAC+AGG | - | chr1_1:69260955-69260974 | Msa0039550:CDS | 30.0% | |
| TTTGGTTAACTACAATGACA+GGG | - | chr1_1:69260956-69260975 | Msa0039550:CDS | 30.0% | |
| AGGATCAATATTATTACAGC+AGG | - | chr1_1:69261006-69261025 | Msa0039550:CDS | 30.0% | |
| ! | TTGATTTTCGTTGTTTGTGT+TGG | - | chr1_1:69261110-69261129 | Msa0039550:intron | 30.0% |
| ATGAAAAGCTCTTGTTGAAT+AGG | - | chr1_1:69261236-69261255 | Msa0039550:intron | 30.0% | |
| TAGAGAGATTGTTAGCTATT+TGG | + | chr1_1:69261284-69261303 | None:intergenic | 30.0% | |
| AGAATAAAATGTGTTCACCA+AGG | + | chr1_1:69261559-69261578 | None:intergenic | 30.0% | |
| CAATTTCAGACCAAAATTGT+CGG | + | chr1_1:69261621-69261640 | None:intergenic | 30.0% | |
| TCTCAAAAGGACTAATGTAA+AGG | + | chr1_1:69261681-69261700 | None:intergenic | 30.0% | |
| ACACATTAAGTGTGAAGAAT+TGG | - | chr1_1:69261839-69261858 | Msa0039550:intron | 30.0% | |
| AAGTACATATGGTAACCATA+GGG | + | chr1_1:69261906-69261925 | None:intergenic | 30.0% | |
| TAAGTACATATGGTAACCAT+AGG | + | chr1_1:69261907-69261926 | None:intergenic | 30.0% | |
| TGGTTACCATATGTACTTAT+AGG | - | chr1_1:69261908-69261927 | Msa0039550:intron | 30.0% | |
| TCTTCTCCTATAAGTACATA+TGG | + | chr1_1:69261917-69261936 | None:intergenic | 30.0% | |
| GCTTAGACTTCAAATAGTAA+AGG | + | chr1_1:69262100-69262119 | None:intergenic | 30.0% | |
| ! | TTCTTTTAGATCATTCTGCT+TGG | - | chr1_1:69262129-69262148 | Msa0039550:intron | 30.0% |
| GTTCTTCAAGAATGATAAAG+GGG | + | chr1_1:69262176-69262195 | None:intergenic | 30.0% | |
| TATGATATTTGTCAACAAGC+TGG | + | chr1_1:69262276-69262295 | None:intergenic | 30.0% | |
| GTTGACAAATATCATAGACA+AGG | - | chr1_1:69262280-69262299 | Msa0039550:CDS | 30.0% | |
| CAAATATCATAGACAAGGTT+TGG | - | chr1_1:69262285-69262304 | Msa0039550:CDS | 30.0% | |
| ! | CATGATTCGATGATTTTGTA+AGG | - | chr1_1:69262366-69262385 | Msa0039550:intron | 30.0% |
| ! | GTCATTCATCTTTTACACAA+AGG | - | chr1_1:69262418-69262437 | Msa0039550:intron | 30.0% |
| CTGATACCATCGTAAAATTT+GGG | + | chr1_1:69262544-69262563 | None:intergenic | 30.0% | |
| TCTGATACCATCGTAAAATT+TGG | + | chr1_1:69262545-69262564 | None:intergenic | 30.0% | |
| !!! | TCACATTACTTTTTCGCAAA+AGG | - | chr1_1:69262736-69262755 | Msa0039550:CDS | 30.0% |
| !! | AGTAGTTGATGGAATGAAAC+TGG | + | chr1_1:69259708-69259727 | None:intergenic | 35.0% |
| ATTACAACCTGTTCCACAAA+AGG | + | chr1_1:69259895-69259914 | None:intergenic | 35.0% | |
| GTGGAACAGGTTGTAATAAA+TGG | - | chr1_1:69259898-69259917 | Msa0039550:three_prime_UTR | 35.0% | |
| TGTAATAAATGGAGCAGCAA+AGG | - | chr1_1:69259909-69259928 | Msa0039550:three_prime_UTR | 35.0% | |
| GCTATTGATACTCAACATGT+TGG | - | chr1_1:69259991-69260010 | Msa0039550:three_prime_UTR | 35.0% | |
| !! | TTTCATATAGCTTTGTGGCA+TGG | - | chr1_1:69260153-69260172 | Msa0039550:three_prime_UTR | 35.0% |
| AATGACCTTACTATGGTCTT+AGG | - | chr1_1:69260202-69260221 | Msa0039550:three_prime_UTR | 35.0% | |
| CATTGTCATATACTGCAGAA+GGG | + | chr1_1:69260382-69260401 | None:intergenic | 35.0% | |
| ACATTGTCATATACTGCAGA+AGG | + | chr1_1:69260383-69260402 | None:intergenic | 35.0% | |
| TCAACATACTTATATGCAGC+TGG | - | chr1_1:69260426-69260445 | Msa0039550:CDS | 35.0% | |
| AGGAAACAACTTCAAGTGAT+AGG | - | chr1_1:69260545-69260564 | Msa0039550:intron | 35.0% | |
| ACTTCAAGTGATAGGACAAT+AGG | - | chr1_1:69260553-69260572 | Msa0039550:intron | 35.0% | |
| ACTATATAGGCAACAGCATT+TGG | - | chr1_1:69260675-69260694 | Msa0039550:intron | 35.0% | |
| ! | TCTTACATTTGCATTAGCCT+TGG | + | chr1_1:69261080-69261099 | None:intergenic | 35.0% |
| GGATCCACTTCAAATATGAA+CGG | - | chr1_1:69261131-69261150 | Msa0039550:intron | 35.0% | |
| AACACCGTTCATATTTGAAG+TGG | + | chr1_1:69261138-69261157 | None:intergenic | 35.0% | |
| TTGTGTGTATTAGCATCAAG+TGG | + | chr1_1:69261372-69261391 | None:intergenic | 35.0% | |
| AAGTGAACTGTTGTACTAGA+GGG | + | chr1_1:69261514-69261533 | None:intergenic | 35.0% | |
| AAAGTGAACTGTTGTACTAG+AGG | + | chr1_1:69261515-69261534 | None:intergenic | 35.0% | |
| !! | AGTACAACAGTTCACTTTTC+TGG | - | chr1_1:69261517-69261536 | Msa0039550:intron | 35.0% |
| ! | CTATAAGTGTCCGACAATTT+TGG | - | chr1_1:69261608-69261627 | Msa0039550:intron | 35.0% |
| TGTGTGAGATTCTTGTCATT+AGG | + | chr1_1:69261824-69261843 | None:intergenic | 35.0% | |
| TGTGAAGAATTGGAGAATTG+CGG | - | chr1_1:69261849-69261868 | Msa0039550:intron | 35.0% | |
| ATAGGGACATTTGATGTGTT+GGG | + | chr1_1:69261889-69261908 | None:intergenic | 35.0% | |
| !! | CAAATAGTAAAGGTACCTTG+AGG | + | chr1_1:69262090-69262109 | None:intergenic | 35.0% |
| ! | CATATGCTAATGCTACCTTT+TGG | - | chr1_1:69262227-69262246 | Msa0039550:intron | 35.0% |
| GTCGCTTGAATTTAACCAAA+AGG | + | chr1_1:69262245-69262264 | None:intergenic | 35.0% | |
| AATGTGTGTGGAGAGAAATT+CGG | + | chr1_1:69262335-69262354 | None:intergenic | 35.0% | |
| ! | GTTCAGAATGATAATGTGTG+TGG | + | chr1_1:69262347-69262366 | None:intergenic | 35.0% |
| AGCAATCAATTTAGCCAGTT+AGG | - | chr1_1:69262446-69262465 | Msa0039550:intron | 35.0% | |
| ACCATCGTAAAATTTGGGTA+GGG | + | chr1_1:69262539-69262558 | None:intergenic | 35.0% | |
| TACCATCGTAAAATTTGGGT+AGG | + | chr1_1:69262540-69262559 | None:intergenic | 35.0% | |
| GAGTTGGATCTAATTCAACA+AGG | + | chr1_1:69262605-69262624 | None:intergenic | 35.0% | |
| AGTAATGTGTAAGTCTCTTG+TGG | - | chr1_1:69262642-69262661 | Msa0039550:intron | 35.0% | |
| !! | GTTGTTATTTCTGGTGATGT+CGG | - | chr1_1:69262676-69262695 | Msa0039550:intron | 35.0% |
| GAACGAAATGATAGTCCAAT+GGG | + | chr1_1:69262718-69262737 | None:intergenic | 35.0% | |
| TGAACGAAATGATAGTCCAA+TGG | + | chr1_1:69262719-69262738 | None:intergenic | 35.0% | |
| !! | TGTCACTTTAGGATGGATTA+CGG | + | chr1_1:69262829-69262848 | None:intergenic | 35.0% |
| !! | TCTGTTATGTCACTTTAGGA+TGG | + | chr1_1:69262836-69262855 | None:intergenic | 35.0% |
| ACACAGATATAGCTTGAGCT+GGG | + | chr1_1:69259618-69259637 | None:intergenic | 40.0% | |
| ! | GGCTTATCTTCTTTTGGTCA+CGG | - | chr1_1:69259651-69259670 | Msa0039550:three_prime_UTR | 40.0% |
| ! | TTCAACACCTTTTGTGGAAC+AGG | - | chr1_1:69259885-69259904 | Msa0039550:three_prime_UTR | 40.0% |
| AATGGAGCAGCAAAGGAAAT+AGG | - | chr1_1:69259916-69259935 | Msa0039550:three_prime_UTR | 40.0% | |
| AAAGGAAATAGGAAGAGCAG+CGG | - | chr1_1:69259927-69259946 | Msa0039550:three_prime_UTR | 40.0% | |
| CAACATGTTGGGGAAGATAT+TGG | - | chr1_1:69260003-69260022 | Msa0039550:three_prime_UTR | 40.0% | |
| TAGAGCCTAAGACCATAGTA+AGG | + | chr1_1:69260210-69260229 | None:intergenic | 40.0% | |
| ! | ACCGTATCCAATTTGATTCG+CGG | + | chr1_1:69260723-69260742 | None:intergenic | 40.0% |
| ATTGTCTGCATTCTGTGAGA+AGG | - | chr1_1:69260749-69260768 | Msa0039550:intron | 40.0% | |
| ! | ATTGATCCTATGGAAAGCGT+TGG | + | chr1_1:69260995-69261014 | None:intergenic | 40.0% |
| ATTCCACAATTTCGACGTTG+CGG | + | chr1_1:69261057-69261076 | None:intergenic | 40.0% | |
| !! | ATTTGGTTTGCTTCTGCAGA+TGG | + | chr1_1:69261267-69261286 | None:intergenic | 40.0% |
| GCTAACAATCTCTCTAACCT+CGG | - | chr1_1:69261288-69261307 | Msa0039550:intron | 40.0% | |
| CTCTGTTATAGATTTGACCG+AGG | + | chr1_1:69261308-69261327 | None:intergenic | 40.0% | |
| AGATTCCTCAACAGATGTCT+TGG | - | chr1_1:69261329-69261348 | Msa0039550:intron | 40.0% | |
| ATATCACATGACAAGGCAAG+AGG | - | chr1_1:69261436-69261455 | Msa0039550:CDS | 40.0% | |
| ! | AAGGCAAGAGGTCAAGTTTT+GGG | - | chr1_1:69261448-69261467 | Msa0039550:CDS | 40.0% |
| !!! | TGCACAGTTTGGTTTTACCA+GGG | - | chr1_1:69261485-69261504 | Msa0039550:CDS | 40.0% |
| !! | ACAGTTCACTTTTCTGGTCT+TGG | - | chr1_1:69261523-69261542 | Msa0039550:intron | 40.0% |
| GTGAAGAATTGGAGAATTGC+GGG | - | chr1_1:69261850-69261869 | Msa0039550:intron | 40.0% | |
| CATAGGGACATTTGATGTGT+TGG | + | chr1_1:69261890-69261909 | None:intergenic | 40.0% | |
| CAACACATCAAATGTCCCTA+TGG | - | chr1_1:69261888-69261907 | Msa0039550:intron | 40.0% | |
| GAAGAACTTAGTATACGGCT+TGG | - | chr1_1:69262189-69262208 | Msa0039550:intron | 40.0% | |
| GTTAAATTCAAGCGACTCAC+TGG | - | chr1_1:69262249-69262268 | Msa0039550:CDS | 40.0% | |
| ! | TTGTACAAGGCATTCCTAAC+TGG | + | chr1_1:69262463-69262482 | None:intergenic | 40.0% |
| ! | ACCCTACCCAAATTTTACGA+TGG | - | chr1_1:69262535-69262554 | Msa0039550:CDS | 40.0% |
| ! | TCAGTAGAGTGCAAGTCTTT+TGG | - | chr1_1:69262568-69262587 | Msa0039550:intron | 40.0% |
| TAGTCCAATGGGAAACTTGT+GGG | + | chr1_1:69262707-69262726 | None:intergenic | 40.0% | |
| ATAGTCCAATGGGAAACTTG+TGG | + | chr1_1:69262708-69262727 | None:intergenic | 40.0% | |
| GACACAGATATAGCTTGAGC+TGG | + | chr1_1:69259619-69259638 | None:intergenic | 45.0% | |
| GGAATGAAACTGGCAGCTTA+AGG | + | chr1_1:69259698-69259717 | None:intergenic | 45.0% | |
| AGCGGTATTAGCTGTGACAA+AGG | - | chr1_1:69259945-69259964 | Msa0039550:three_prime_UTR | 45.0% | |
| TGTTGGGGAAGATATTGGAC+AGG | - | chr1_1:69260008-69260027 | Msa0039550:three_prime_UTR | 45.0% | |
| GGTCTTAGGCTCTATATCTC+AGG | - | chr1_1:69260216-69260235 | Msa0039550:three_prime_UTR | 45.0% | |
| GAATTGCGATTTGCAGTCCA+AGG | - | chr1_1:69260328-69260347 | Msa0039550:intron | 45.0% | |
| GCCGCGAATCAAATTGGATA+CGG | - | chr1_1:69260719-69260738 | Msa0039550:intron | 45.0% | |
| ! | ACTACAATGACAGGGTGTCT+TGG | - | chr1_1:69260964-69260983 | Msa0039550:CDS | 45.0% |
| CAATTTCGACGTTGCGGTAA+TGG | + | chr1_1:69261051-69261070 | None:intergenic | 45.0% | |
| TTACCGCAACGTCGAAATTG+TGG | - | chr1_1:69261051-69261070 | Msa0039550:intron | 45.0% | |
| CGTCGAAATTGTGGAATCCA+AGG | - | chr1_1:69261060-69261079 | Msa0039550:intron | 45.0% | |
| CCTTACCAAGACATCTGTTG+AGG | + | chr1_1:69261337-69261356 | None:intergenic | 45.0% | |
| CCTCAACAGATGTCTTGGTA+AGG | - | chr1_1:69261334-69261353 | Msa0039550:intron | 45.0% | |
| ! | CAAGGCAAGAGGTCAAGTTT+TGG | - | chr1_1:69261447-69261466 | Msa0039550:CDS | 45.0% |
| !!! | AGAGGTCAAGTTTTGGGAGA+TGG | - | chr1_1:69261454-69261473 | Msa0039550:CDS | 45.0% |
| !!! | GTGCACAGTTTGGTTTTACC+AGG | - | chr1_1:69261484-69261503 | Msa0039550:CDS | 45.0% |
| !!! | TCACTTTTCTGGTCTTGGAG+AGG | - | chr1_1:69261528-69261547 | Msa0039550:intron | 45.0% |
| GATGTACAATGTCTCATGCC+AGG | - | chr1_1:69262034-69262053 | Msa0039550:intron | 45.0% | |
| CTAATGGCTAATAGCAAGCC+TGG | + | chr1_1:69262055-69262074 | None:intergenic | 45.0% | |
| ATTCCCCACAAGTTTCCCAT+TGG | - | chr1_1:69262700-69262719 | Msa0039550:CDS | 45.0% | |
| AGTCCAATGGGAAACTTGTG+GGG | + | chr1_1:69262706-69262725 | None:intergenic | 45.0% | |
| TTGTACAGGTTGTGCTGTGC+AGG | + | chr1_1:69259776-69259795 | None:intergenic | 50.0% | |
| TTAGCTGTGACAAAGGCCAG+AGG | - | chr1_1:69259952-69259971 | Msa0039550:three_prime_UTR | 50.0% | |
| TGTGACAAAGGCCAGAGGAA+TGG | - | chr1_1:69259957-69259976 | Msa0039550:three_prime_UTR | 50.0% | |
| TCCAGCAACTTCCATTCCTC+TGG | + | chr1_1:69259971-69259990 | None:intergenic | 50.0% | |
| GAAATCGACTACAACCGCTG+TGG | + | chr1_1:69260354-69260373 | None:intergenic | 50.0% | |
| GTACGTGCCGCGAATCAAAT+TGG | - | chr1_1:69260713-69260732 | Msa0039550:intron | 50.0% | |
| ATTCTGTGAGAAGGCCAGCA+TGG | - | chr1_1:69260758-69260777 | Msa0039550:intron | 50.0% | |
| GTTGCTCCAACGCTTTCCAT+AGG | - | chr1_1:69260986-69261005 | Msa0039550:CDS | 50.0% | |
| TGGAATTCGCGTGCACAGTT+TGG | - | chr1_1:69261474-69261493 | Msa0039550:CDS | 50.0% | |
| ! | GTCTTGGAGAGGTATGTCCT+TGG | - | chr1_1:69261539-69261558 | Msa0039550:intron | 50.0% |
| ! | GAGGCGCACGACTTTTCTAA+TGG | + | chr1_1:69262071-69262090 | None:intergenic | 50.0% |
| TAGAAAAGTCGTGCGCCTCA+AGG | - | chr1_1:69262072-69262091 | Msa0039550:intron | 50.0% | |
| GTGTGTGGAGAGAAATTCGG+AGG | + | chr1_1:69262332-69262351 | None:intergenic | 50.0% | |
| CACGGAGACTTGAGCAGCAA+TGG | - | chr1_1:69259669-69259688 | Msa0039550:three_prime_UTR | 55.0% | |
| GCCAGAGGAATGGAAGTTGC+TGG | - | chr1_1:69259967-69259986 | Msa0039550:three_prime_UTR | 55.0% | |
| TTTGCAGTCCAAGGCCACAG+CGG | - | chr1_1:69260337-69260356 | Msa0039550:intron | 55.0% | |
| AAGGCCAGCATGGTGAGCAA+GGG | - | chr1_1:69260768-69260787 | Msa0039550:intron | 55.0% | |
| GTTGTACTAGAGGGAAGCCC+TGG | + | chr1_1:69261505-69261524 | None:intergenic | 55.0% | |
| GACTACAACCGCTGTGGCCT+TGG | + | chr1_1:69260348-69260367 | None:intergenic | 60.0% | |
| GAAGGCCAGCATGGTGAGCA+AGG | - | chr1_1:69260767-69260786 | Msa0039550:intron | 60.0% | |
| AGGCCAGCATGGTGAGCAAG+GGG | - | chr1_1:69260769-69260788 | Msa0039550:intron | 60.0% | |
| TCACCCCTTGCTCACCATGC+TGG | + | chr1_1:69260775-69260794 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 69259605 | 69262879 | 69259605 | ID=Msa0039550;Name=Msa0039550 |
| chr1_1 | mRNA | 69259605 | 69262879 | 69259605 | ID=Msa0039550-mRNA-1;Parent=Msa0039550;Name=Msa0039550-mRNA-1;_AED=0.13;_eAED=0.13;_QI=83|1|1|1|1|1|10|654|302 |
| chr1_1 | exon | 69259605 | 69260291 | 69259605 | ID=Msa0039550-mRNA-1:exon:22680;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69260391 | 69260477 | 69260391 | ID=Msa0039550-mRNA-1:exon:22679;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69260935 | 69261033 | 69260935 | ID=Msa0039550-mRNA-1:exon:22678;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69261134 | 69261226 | 69261134 | ID=Msa0039550-mRNA-1:exon:22677;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69261391 | 69261507 | 69261391 | ID=Msa0039550-mRNA-1:exon:22676;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69261705 | 69261800 | 69261705 | ID=Msa0039550-mRNA-1:exon:22675;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69262075 | 69262140 | 69262075 | ID=Msa0039550-mRNA-1:exon:22674;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69262247 | 69262321 | 69262247 | ID=Msa0039550-mRNA-1:exon:22673;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69262455 | 69262577 | 69262455 | ID=Msa0039550-mRNA-1:exon:22672;Parent=Msa0039550-mRNA-1 |
| chr1_1 | exon | 69262677 | 69262879 | 69262677 | ID=Msa0039550-mRNA-1:exon:22671;Parent=Msa0039550-mRNA-1 |
| chr1_1 | five_prime_UTR | 69262797 | 69262879 | 69262797 | ID=Msa0039550-mRNA-1:five_prime_utr;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69262677 | 69262796 | 69262677 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69262455 | 69262577 | 69262455 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69262247 | 69262321 | 69262247 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69262075 | 69262140 | 69262075 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69261705 | 69261800 | 69261705 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69261391 | 69261507 | 69261391 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69261134 | 69261226 | 69261134 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69260935 | 69261033 | 69260935 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69260391 | 69260477 | 69260391 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | CDS | 69260259 | 69260291 | 69260259 | ID=Msa0039550-mRNA-1:cds;Parent=Msa0039550-mRNA-1 |
| chr1_1 | three_prime_UTR | 69259605 | 69260258 | 69259605 | ID=Msa0039550-mRNA-1:three_prime_utr;Parent=Msa0039550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
