Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180002947.01.T01 | XP_013466453.1 | 43.23 | 421 | 117 | 13 | 1 | 316 | 1 | 404 | 2.83E-80 | 260 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180002947.01.T01 | A0A072VEQ4 | 43.230 | 421 | 117 | 13 | 1 | 316 | 1 | 404 | 1.35e-80 | 260 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180002947.01.T01 | MTR_1g029650 | 43.230 | 421 | 117 | 13 | 1 | 316 | 1 | 404 | 3.42e-84 | 260 |
MsG0180002947.01.T01 | MTR_1g015730 | 41.469 | 422 | 107 | 13 | 5 | 317 | 6 | 396 | 1.51e-72 | 229 |
MsG0180002947.01.T01 | MTR_1g015740 | 42.857 | 399 | 75 | 10 | 1 | 317 | 1 | 328 | 1.33e-71 | 225 |
MsG0180002947.01.T01 | MTR_4g013180 | 39.050 | 379 | 130 | 14 | 10 | 292 | 13 | 386 | 5.91e-60 | 199 |
MsG0180002947.01.T01 | MTR_7g077970 | 36.009 | 436 | 147 | 13 | 1 | 317 | 1 | 423 | 1.76e-57 | 191 |
MsG0180002947.01.T01 | MTR_7g078900 | 41.026 | 351 | 125 | 13 | 32 | 317 | 91 | 424 | 2.28e-57 | 191 |
MsG0180002947.01.T01 | MTR_1g088120 | 36.131 | 429 | 143 | 17 | 1 | 316 | 1 | 411 | 4.63e-56 | 187 |
MsG0180002947.01.T01 | MTR_4g013185 | 39.776 | 357 | 126 | 15 | 31 | 316 | 88 | 426 | 3.90e-55 | 185 |
MsG0180002947.01.T01 | MTR_7g078040 | 37.190 | 363 | 144 | 12 | 26 | 317 | 85 | 434 | 3.04e-53 | 181 |
MsG0180002947.01.T01 | MTR_4g013175 | 38.202 | 356 | 135 | 12 | 31 | 317 | 88 | 427 | 1.02e-52 | 179 |
MsG0180002947.01.T01 | MTR_7g079160 | 40.719 | 334 | 115 | 16 | 32 | 289 | 87 | 413 | 9.74e-52 | 177 |
MsG0180002947.01.T01 | MTR_5g058620 | 44.876 | 283 | 86 | 11 | 95 | 317 | 11 | 283 | 2.35e-51 | 171 |
MsG0180002947.01.T01 | MTR_1g058870 | 44.876 | 283 | 86 | 11 | 95 | 317 | 11 | 283 | 2.35e-51 | 171 |
MsG0180002947.01.T01 | MTR_7g077070 | 35.267 | 431 | 143 | 16 | 8 | 317 | 16 | 431 | 2.84e-51 | 175 |
MsG0180002947.01.T01 | MTR_7g078840 | 39.198 | 324 | 109 | 15 | 31 | 277 | 88 | 400 | 5.87e-51 | 174 |
MsG0180002947.01.T01 | MTR_1g016960 | 42.014 | 288 | 109 | 9 | 32 | 317 | 26 | 257 | 6.03e-51 | 169 |
MsG0180002947.01.T01 | MTR_4g128320 | 37.829 | 304 | 104 | 8 | 8 | 283 | 18 | 264 | 4.01e-49 | 166 |
MsG0180002947.01.T01 | MTR_0242s0060 | 32.564 | 433 | 153 | 13 | 5 | 317 | 6 | 419 | 6.36e-49 | 169 |
MsG0180002947.01.T01 | MTR_0242s0040 | 32.564 | 433 | 153 | 13 | 5 | 317 | 6 | 419 | 6.36e-49 | 169 |
MsG0180002947.01.T01 | MTR_4g008790 | 37.812 | 320 | 113 | 11 | 33 | 290 | 132 | 427 | 5.01e-48 | 167 |
MsG0180002947.01.T01 | MTR_7g077990 | 36.451 | 417 | 128 | 15 | 8 | 321 | 17 | 399 | 1.49e-47 | 165 |
MsG0180002947.01.T01 | MTR_7g078860 | 40.909 | 308 | 108 | 14 | 32 | 280 | 88 | 380 | 2.70e-47 | 164 |
MsG0180002947.01.T01 | MTR_7g078940 | 40.391 | 307 | 137 | 13 | 31 | 314 | 117 | 400 | 6.92e-47 | 163 |
MsG0180002947.01.T01 | MTR_6g055210 | 32.041 | 387 | 141 | 9 | 8 | 279 | 22 | 401 | 1.10e-46 | 164 |
MsG0180002947.01.T01 | MTR_3g013470 | 37.764 | 331 | 131 | 11 | 13 | 291 | 53 | 360 | 7.59e-45 | 157 |
MsG0180002947.01.T01 | MTR_7g056503 | 34.417 | 369 | 147 | 11 | 5 | 282 | 18 | 382 | 5.39e-44 | 155 |
MsG0180002947.01.T01 | MTR_7g077910 | 37.079 | 356 | 141 | 15 | 26 | 317 | 1 | 337 | 4.73e-43 | 151 |
MsG0180002947.01.T01 | MTR_7g062060 | 32.808 | 381 | 141 | 12 | 8 | 279 | 12 | 386 | 2.47e-42 | 151 |
MsG0180002947.01.T01 | MTR_4g030110 | 31.534 | 352 | 152 | 10 | 8 | 276 | 30 | 375 | 8.97e-40 | 144 |
MsG0180002947.01.T01 | MTR_5g069760 | 33.333 | 396 | 146 | 17 | 8 | 316 | 6 | 370 | 6.95e-39 | 141 |
MsG0180002947.01.T01 | MTR_7g061050 | 32.653 | 392 | 152 | 14 | 2 | 295 | 7 | 384 | 8.06e-39 | 141 |
MsG0180002947.01.T01 | MTR_7g055977 | 33.243 | 370 | 132 | 15 | 8 | 277 | 7 | 361 | 1.66e-38 | 140 |
MsG0180002947.01.T01 | MTR_5g069930 | 31.762 | 403 | 150 | 16 | 8 | 316 | 6 | 377 | 2.01e-38 | 140 |
MsG0180002947.01.T01 | MTR_7g060940 | 31.452 | 372 | 142 | 11 | 5 | 279 | 19 | 374 | 7.05e-38 | 139 |
MsG0180002947.01.T01 | MTR_7g056023 | 39.076 | 238 | 118 | 9 | 8 | 228 | 30 | 257 | 2.96e-37 | 134 |
MsG0180002947.01.T01 | MTR_6g016285 | 31.218 | 394 | 140 | 13 | 5 | 279 | 18 | 399 | 9.19e-37 | 137 |
MsG0180002947.01.T01 | MTR_0128s0020 | 31.165 | 369 | 157 | 15 | 1 | 277 | 10 | 373 | 1.48e-36 | 135 |
MsG0180002947.01.T01 | MTR_1g442850 | 31.868 | 364 | 138 | 13 | 10 | 276 | 7 | 357 | 3.23e-36 | 134 |
MsG0180002947.01.T01 | MTR_8g066440 | 31.593 | 383 | 157 | 16 | 10 | 292 | 25 | 402 | 3.83e-36 | 134 |
MsG0180002947.01.T01 | MTR_0649s0020 | 30.488 | 410 | 162 | 15 | 1 | 314 | 4 | 386 | 4.63e-36 | 134 |
MsG0180002947.01.T01 | MTR_4g129190 | 31.325 | 415 | 151 | 17 | 7 | 316 | 5 | 390 | 6.41e-36 | 134 |
MsG0180002947.01.T01 | MTR_7g055870 | 31.486 | 397 | 132 | 14 | 8 | 273 | 13 | 400 | 1.13e-35 | 134 |
MsG0180002947.01.T01 | MTR_7g061090 | 32.576 | 396 | 148 | 13 | 8 | 295 | 22 | 406 | 2.00e-35 | 133 |
MsG0180002947.01.T01 | MTR_7g028660 | 30.370 | 405 | 156 | 13 | 5 | 316 | 8 | 379 | 2.06e-35 | 132 |
MsG0180002947.01.T01 | MTR_7g060960 | 33.867 | 375 | 146 | 16 | 5 | 314 | 29 | 366 | 2.28e-35 | 132 |
MsG0180002947.01.T01 | MTR_7g445890 | 31.624 | 351 | 161 | 10 | 4 | 276 | 12 | 361 | 6.88e-35 | 131 |
MsG0180002947.01.T01 | MTR_7g057270 | 32.454 | 379 | 140 | 15 | 8 | 279 | 26 | 395 | 1.14e-34 | 131 |
MsG0180002947.01.T01 | MTR_7g061060 | 31.795 | 390 | 153 | 13 | 2 | 292 | 7 | 382 | 4.33e-34 | 129 |
MsG0180002947.01.T01 | MTR_4g019990 | 30.193 | 414 | 154 | 16 | 6 | 314 | 4 | 387 | 4.38e-34 | 129 |
MsG0180002947.01.T01 | MTR_7g050480 | 31.868 | 364 | 143 | 10 | 8 | 280 | 22 | 371 | 4.93e-34 | 129 |
MsG0180002947.01.T01 | MTR_2g047200 | 29.854 | 412 | 157 | 17 | 5 | 317 | 17 | 395 | 5.22e-34 | 129 |
MsG0180002947.01.T01 | MTR_5g096710 | 30.923 | 401 | 157 | 16 | 8 | 314 | 23 | 397 | 6.80e-34 | 128 |
MsG0180002947.01.T01 | MTR_7g050520 | 30.471 | 361 | 152 | 7 | 8 | 280 | 22 | 371 | 9.61e-34 | 128 |
MsG0180002947.01.T01 | MTR_7g055930 | 30.370 | 405 | 138 | 14 | 8 | 279 | 13 | 406 | 1.10e-33 | 128 |
MsG0180002947.01.T01 | MTR_6g065510 | 33.243 | 367 | 129 | 17 | 8 | 316 | 23 | 331 | 1.34e-33 | 126 |
MsG0180002947.01.T01 | MTR_7g062100 | 33.702 | 362 | 140 | 15 | 8 | 277 | 24 | 377 | 1.56e-33 | 127 |
MsG0180002947.01.T01 | MTR_0128s0070 | 29.558 | 362 | 160 | 12 | 6 | 277 | 20 | 376 | 1.80e-33 | 127 |
MsG0180002947.01.T01 | MTR_2g047892 | 29.353 | 402 | 167 | 14 | 5 | 314 | 19 | 395 | 1.83e-33 | 127 |
MsG0180002947.01.T01 | MTR_7g056737 | 32.520 | 369 | 144 | 16 | 5 | 280 | 19 | 375 | 1.90e-33 | 127 |
MsG0180002947.01.T01 | MTR_3g080370 | 31.405 | 363 | 139 | 12 | 32 | 314 | 84 | 416 | 2.32e-33 | 128 |
MsG0180002947.01.T01 | MTR_3g464470 | 31.313 | 396 | 163 | 15 | 6 | 314 | 5 | 378 | 2.91e-33 | 126 |
MsG0180002947.01.T01 | MTR_2g010950 | 31.830 | 377 | 150 | 16 | 5 | 280 | 17 | 387 | 3.40e-33 | 127 |
MsG0180002947.01.T01 | MTR_7g061010 | 32.419 | 401 | 147 | 15 | 5 | 314 | 19 | 386 | 3.53e-33 | 126 |
MsG0180002947.01.T01 | MTR_7g055987 | 35.165 | 273 | 108 | 10 | 8 | 228 | 20 | 275 | 4.48e-33 | 125 |
MsG0180002947.01.T01 | MTR_2g047878 | 30.829 | 386 | 158 | 16 | 2 | 314 | 13 | 362 | 5.18e-33 | 125 |
MsG0180002947.01.T01 | MTR_4g030830 | 29.512 | 410 | 160 | 13 | 8 | 314 | 9 | 392 | 6.35e-33 | 125 |
MsG0180002947.01.T01 | MTR_4g033495 | 31.099 | 373 | 146 | 12 | 5 | 276 | 24 | 386 | 8.60e-33 | 126 |
MsG0180002947.01.T01 | MTR_7g066100 | 41.410 | 227 | 92 | 10 | 32 | 228 | 75 | 290 | 1.88e-32 | 124 |
MsG0180002947.01.T01 | MTR_0707s0020 | 31.755 | 359 | 148 | 13 | 24 | 315 | 115 | 443 | 3.34e-32 | 125 |
MsG0180002947.01.T01 | MTR_7g055830 | 32.853 | 347 | 125 | 15 | 8 | 273 | 13 | 332 | 3.95e-32 | 123 |
MsG0180002947.01.T01 | MTR_7g056710 | 30.495 | 364 | 146 | 13 | 5 | 276 | 15 | 363 | 4.11e-32 | 123 |
MsG0180002947.01.T01 | MTR_2g010920 | 30.075 | 399 | 148 | 14 | 5 | 280 | 17 | 407 | 4.30e-32 | 124 |
MsG0180002947.01.T01 | MTR_5g056020 | 31.611 | 329 | 137 | 11 | 32 | 279 | 81 | 402 | 4.68e-32 | 125 |
MsG0180002947.01.T01 | MTR_7g445750 | 33.677 | 291 | 115 | 12 | 8 | 228 | 23 | 305 | 7.76e-32 | 121 |
MsG0180002947.01.T01 | MTR_0097s0030 | 30.618 | 356 | 149 | 12 | 8 | 277 | 14 | 357 | 7.82e-32 | 122 |
MsG0180002947.01.T01 | MTR_2g047240 | 30.618 | 356 | 149 | 12 | 8 | 277 | 14 | 357 | 7.82e-32 | 122 |
MsG0180002947.01.T01 | MTR_2g043410 | 29.343 | 426 | 150 | 16 | 8 | 314 | 22 | 415 | 8.75e-32 | 123 |
MsG0180002947.01.T01 | MTR_7g009265 | 30.725 | 345 | 153 | 11 | 36 | 316 | 2 | 324 | 9.73e-32 | 121 |
MsG0180002947.01.T01 | MTR_3g464500 | 30.750 | 400 | 163 | 16 | 6 | 314 | 25 | 401 | 1.12e-31 | 122 |
MsG0180002947.01.T01 | MTR_7g113500 | 32.153 | 339 | 142 | 12 | 6 | 280 | 50 | 364 | 1.29e-31 | 122 |
MsG0180002947.01.T01 | MTR_2g043400 | 29.882 | 425 | 149 | 15 | 8 | 314 | 23 | 416 | 1.38e-31 | 122 |
MsG0180002947.01.T01 | MTR_7g070830 | 31.143 | 350 | 140 | 15 | 4 | 263 | 17 | 355 | 1.46e-31 | 122 |
MsG0180002947.01.T01 | MTR_4g031020 | 26.897 | 435 | 169 | 13 | 8 | 315 | 15 | 427 | 1.55e-31 | 122 |
MsG0180002947.01.T01 | MTR_2g461450 | 31.503 | 346 | 141 | 14 | 8 | 272 | 18 | 348 | 2.10e-31 | 121 |
MsG0180002947.01.T01 | MTR_6g086920 | 31.157 | 337 | 139 | 10 | 24 | 279 | 127 | 451 | 2.23e-31 | 123 |
MsG0180002947.01.T01 | MTR_7g052670 | 28.894 | 398 | 156 | 15 | 8 | 281 | 21 | 415 | 2.72e-31 | 122 |
MsG0180002947.01.T01 | MTR_7g022600 | 29.049 | 389 | 161 | 16 | 2 | 277 | 15 | 401 | 2.77e-31 | 122 |
MsG0180002947.01.T01 | MTR_4g011660 | 28.910 | 422 | 161 | 14 | 8 | 314 | 19 | 416 | 5.60e-31 | 121 |
MsG0180002947.01.T01 | MTR_7g056717 | 32.425 | 367 | 143 | 14 | 5 | 278 | 19 | 373 | 6.19e-31 | 120 |
MsG0180002947.01.T01 | MTR_4g024890 | 28.109 | 402 | 170 | 11 | 6 | 314 | 8 | 383 | 6.34e-31 | 120 |
MsG0180002947.01.T01 | MTR_7g066850 | 28.753 | 393 | 165 | 12 | 5 | 294 | 20 | 400 | 1.00e-30 | 121 |
MsG0180002947.01.T01 | MTR_7g056570 | 31.405 | 363 | 150 | 13 | 5 | 278 | 15 | 367 | 1.08e-30 | 120 |
MsG0180002947.01.T01 | MTR_7g056290 | 29.195 | 435 | 149 | 17 | 8 | 317 | 22 | 422 | 1.92e-30 | 119 |
MsG0180002947.01.T01 | MTR_0128s0010 | 30.959 | 365 | 149 | 14 | 8 | 277 | 21 | 377 | 2.23e-30 | 119 |
MsG0180002947.01.T01 | MTR_5g068040 | 31.726 | 394 | 162 | 14 | 5 | 316 | 13 | 381 | 3.61e-30 | 118 |
MsG0180002947.01.T01 | MTR_7g056170 | 28.922 | 408 | 165 | 12 | 8 | 314 | 75 | 458 | 3.74e-30 | 119 |
MsG0180002947.01.T01 | MTR_7g056390 | 28.904 | 429 | 158 | 16 | 8 | 317 | 18 | 418 | 4.20e-30 | 118 |
MsG0180002947.01.T01 | MTR_7g056260 | 39.631 | 217 | 104 | 9 | 26 | 228 | 78 | 281 | 5.97e-30 | 116 |
MsG0180002947.01.T01 | MTR_7g070880 | 32.362 | 309 | 114 | 13 | 4 | 228 | 17 | 314 | 9.21e-30 | 117 |
MsG0180002947.01.T01 | MTR_6g088385 | 29.144 | 374 | 127 | 12 | 5 | 315 | 20 | 318 | 1.60e-29 | 115 |
MsG0180002947.01.T01 | MTR_7g078960 | 35.135 | 296 | 114 | 13 | 79 | 316 | 12 | 287 | 2.98e-29 | 114 |
MsG0180002947.01.T01 | MTR_3g437520 | 29.517 | 393 | 141 | 13 | 8 | 276 | 23 | 403 | 3.18e-29 | 117 |
MsG0180002947.01.T01 | MTR_7g052150 | 30.446 | 381 | 147 | 13 | 5 | 283 | 19 | 383 | 5.31e-29 | 115 |
MsG0180002947.01.T01 | MTR_7g055953 | 35.714 | 252 | 85 | 9 | 116 | 316 | 90 | 315 | 5.86e-29 | 113 |
MsG0180002947.01.T01 | MTR_4g030980 | 26.897 | 435 | 169 | 12 | 8 | 315 | 15 | 427 | 6.41e-29 | 115 |
MsG0180002947.01.T01 | MTR_7g078880 | 36.283 | 226 | 97 | 7 | 139 | 318 | 105 | 329 | 6.90e-29 | 115 |
MsG0180002947.01.T01 | MTR_3g072470 | 28.608 | 388 | 147 | 13 | 8 | 276 | 19 | 395 | 7.02e-29 | 115 |
MsG0180002947.01.T01 | MTR_7g056003 | 28.774 | 424 | 161 | 16 | 4 | 314 | 11 | 406 | 1.55e-28 | 114 |
MsG0180002947.01.T01 | MTR_4g030790 | 35.950 | 242 | 122 | 12 | 8 | 228 | 19 | 248 | 1.70e-28 | 112 |
MsG0180002947.01.T01 | MTR_7g066000 | 26.877 | 413 | 164 | 18 | 8 | 316 | 25 | 403 | 2.47e-28 | 113 |
MsG0180002947.01.T01 | MTR_6g017295 | 37.619 | 210 | 110 | 6 | 36 | 228 | 12 | 217 | 2.60e-28 | 115 |
MsG0180002947.01.T01 | MTR_7g091630 | 29.899 | 398 | 154 | 12 | 2 | 279 | 20 | 412 | 3.06e-28 | 114 |
MsG0180002947.01.T01 | MTR_7g030040 | 32.743 | 339 | 156 | 12 | 2 | 318 | 51 | 339 | 4.71e-28 | 111 |
MsG0180002947.01.T01 | MTR_7g066840 | 29.589 | 365 | 151 | 12 | 8 | 277 | 23 | 376 | 1.36e-27 | 111 |
MsG0180002947.01.T01 | MTR_6g092560 | 26.014 | 419 | 178 | 13 | 1 | 315 | 5 | 395 | 2.24e-27 | 111 |
MsG0180002947.01.T01 | MTR_7g091640 | 34.130 | 293 | 119 | 12 | 2 | 228 | 23 | 307 | 2.45e-27 | 110 |
MsG0180002947.01.T01 | MTR_4g030090 | 27.230 | 426 | 158 | 18 | 4 | 314 | 10 | 398 | 4.62e-27 | 110 |
MsG0180002947.01.T01 | MTR_2g006360 | 29.167 | 360 | 158 | 12 | 8 | 314 | 46 | 361 | 8.15e-27 | 108 |
MsG0180002947.01.T01 | MTR_1g071010 | 29.330 | 358 | 155 | 15 | 10 | 277 | 17 | 366 | 1.53e-26 | 108 |
MsG0180002947.01.T01 | MTR_4g034860 | 29.808 | 312 | 140 | 9 | 33 | 276 | 91 | 391 | 3.80e-26 | 107 |
MsG0180002947.01.T01 | MTR_7g066080 | 33.103 | 290 | 113 | 12 | 8 | 229 | 16 | 292 | 4.30e-26 | 107 |
MsG0180002947.01.T01 | MTR_7g037670 | 31.290 | 310 | 156 | 14 | 6 | 277 | 21 | 311 | 5.36e-26 | 105 |
MsG0180002947.01.T01 | MTR_0464s0020 | 27.621 | 391 | 154 | 13 | 8 | 276 | 23 | 406 | 1.41e-25 | 106 |
MsG0180002947.01.T01 | MTR_7g066060 | 27.778 | 378 | 152 | 11 | 8 | 276 | 23 | 388 | 3.50e-25 | 105 |
MsG0180002947.01.T01 | MTR_7g056760 | 30.245 | 367 | 150 | 15 | 5 | 272 | 20 | 379 | 5.02e-25 | 104 |
MsG0180002947.01.T01 | MTR_5g011350 | 34.434 | 212 | 106 | 9 | 31 | 228 | 38 | 230 | 1.09e-24 | 100 |
MsG0180002947.01.T01 | MTR_7g066030 | 30.104 | 289 | 124 | 10 | 8 | 228 | 21 | 299 | 1.47e-24 | 103 |
MsG0180002947.01.T01 | MTR_7g066010 | 30.678 | 339 | 158 | 15 | 8 | 277 | 21 | 351 | 1.54e-24 | 102 |
MsG0180002947.01.T01 | MTR_6g017305 | 31.206 | 282 | 115 | 8 | 93 | 314 | 18 | 280 | 3.40e-24 | 100 |
MsG0180002947.01.T01 | MTR_7g061100 | 35.565 | 239 | 107 | 12 | 2 | 213 | 7 | 225 | 1.01e-23 | 99.8 |
MsG0180002947.01.T01 | MTR_7g070937 | 43.382 | 136 | 58 | 5 | 110 | 227 | 6 | 140 | 1.09e-23 | 95.9 |
MsG0180002947.01.T01 | MTR_2g047895 | 29.712 | 313 | 153 | 12 | 38 | 298 | 8 | 305 | 1.92e-23 | 99.0 |
MsG0180002947.01.T01 | MTR_1g112010 | 29.655 | 290 | 123 | 10 | 67 | 315 | 75 | 324 | 4.68e-23 | 97.8 |
MsG0180002947.01.T01 | MTR_7g056200 | 27.273 | 407 | 147 | 15 | 8 | 314 | 23 | 380 | 1.55e-22 | 97.1 |
MsG0180002947.01.T01 | MTR_7g066040 | 35.238 | 210 | 103 | 8 | 65 | 243 | 22 | 229 | 4.50e-22 | 93.6 |
MsG0180002947.01.T01 | MTR_2g437110 | 28.775 | 351 | 167 | 11 | 8 | 276 | 22 | 371 | 4.57e-22 | 96.7 |
MsG0180002947.01.T01 | MTR_7g056797 | 28.610 | 367 | 148 | 14 | 8 | 272 | 23 | 377 | 4.93e-22 | 95.9 |
MsG0180002947.01.T01 | MTR_5g043160 | 32.390 | 318 | 117 | 17 | 68 | 314 | 166 | 456 | 5.58e-22 | 96.3 |
MsG0180002947.01.T01 | MTR_7g056173 | 34.052 | 232 | 89 | 5 | 109 | 279 | 20 | 248 | 1.10e-21 | 94.0 |
MsG0180002947.01.T01 | MTR_6g017280 | 29.582 | 311 | 141 | 11 | 30 | 276 | 70 | 366 | 3.37e-21 | 93.6 |
MsG0180002947.01.T01 | MTR_1g047490 | 29.352 | 293 | 98 | 11 | 4 | 228 | 18 | 269 | 3.88e-21 | 92.4 |
MsG0180002947.01.T01 | MTR_3g009300 | 31.381 | 239 | 125 | 8 | 11 | 229 | 37 | 256 | 6.28e-21 | 92.4 |
MsG0180002947.01.T01 | MTR_2g010900 | 30.741 | 270 | 138 | 12 | 32 | 264 | 44 | 301 | 8.70e-20 | 89.4 |
MsG0180002947.01.T01 | MTR_4g030760 | 28.792 | 389 | 163 | 15 | 8 | 314 | 73 | 429 | 5.94e-19 | 87.4 |
MsG0180002947.01.T01 | MTR_7g070440 | 32.061 | 262 | 119 | 13 | 8 | 221 | 7 | 257 | 1.33e-18 | 85.9 |
MsG0180002947.01.T01 | MTR_6g081280 | 35.407 | 209 | 92 | 6 | 114 | 280 | 16 | 223 | 2.26e-18 | 83.2 |
MsG0180002947.01.T01 | MTR_5g007610 | 27.509 | 269 | 137 | 9 | 11 | 229 | 44 | 304 | 5.46e-18 | 84.3 |
MsG0180002947.01.T01 | MTR_4g129160 | 36.686 | 169 | 80 | 6 | 68 | 213 | 119 | 283 | 5.55e-18 | 84.0 |
MsG0180002947.01.T01 | MTR_4g006350 | 26.650 | 409 | 187 | 16 | 5 | 312 | 491 | 887 | 1.66e-17 | 84.0 |
MsG0180002947.01.T01 | MTR_5g057710 | 29.268 | 246 | 119 | 9 | 11 | 212 | 49 | 283 | 2.08e-17 | 82.8 |
MsG0180002947.01.T01 | MTR_5g057790 | 28.846 | 260 | 126 | 10 | 11 | 222 | 49 | 297 | 2.30e-17 | 82.4 |
MsG0180002947.01.T01 | MTR_1g094210 | 28.519 | 270 | 124 | 10 | 5 | 228 | 54 | 300 | 6.19e-17 | 81.3 |
MsG0180002947.01.T01 | MTR_1g094210 | 28.519 | 270 | 124 | 10 | 5 | 228 | 54 | 300 | 8.04e-17 | 80.9 |
MsG0180002947.01.T01 | MTR_7g070900 | 40.000 | 140 | 62 | 6 | 100 | 221 | 224 | 359 | 8.09e-17 | 81.3 |
MsG0180002947.01.T01 | MTR_3g009240 | 30.153 | 262 | 125 | 13 | 3 | 220 | 32 | 279 | 1.39e-16 | 80.1 |
MsG0180002947.01.T01 | MTR_8g030630 | 35.057 | 174 | 58 | 5 | 157 | 279 | 72 | 241 | 2.98e-16 | 79.3 |
MsG0180002947.01.T01 | MTR_8g030630 | 30.556 | 180 | 69 | 5 | 136 | 275 | 277 | 440 | 2.55e-12 | 67.8 |
MsG0180002947.01.T01 | MTR_7g034310 | 31.557 | 244 | 96 | 9 | 114 | 316 | 15 | 228 | 7.10e-16 | 75.9 |
MsG0180002947.01.T01 | MTR_6g065980 | 27.984 | 243 | 112 | 11 | 11 | 212 | 19 | 239 | 1.59e-15 | 77.0 |
MsG0180002947.01.T01 | MTR_5g069950 | 36.806 | 144 | 66 | 5 | 91 | 228 | 36 | 160 | 4.39e-15 | 73.6 |
MsG0180002947.01.T01 | MTR_4g020000 | 31.878 | 229 | 96 | 9 | 103 | 276 | 99 | 322 | 4.90e-15 | 75.5 |
MsG0180002947.01.T01 | MTR_3g036290 | 29.297 | 256 | 122 | 9 | 11 | 225 | 25 | 262 | 2.17e-14 | 73.6 |
MsG0180002947.01.T01 | MTR_3g013740 | 28.413 | 271 | 120 | 11 | 3 | 212 | 39 | 296 | 2.44e-14 | 73.6 |
MsG0180002947.01.T01 | MTR_4g024870 | 27.795 | 331 | 149 | 14 | 3 | 279 | 38 | 332 | 2.56e-14 | 73.6 |
MsG0180002947.01.T01 | MTR_3g009310 | 29.231 | 260 | 123 | 12 | 3 | 215 | 38 | 283 | 2.85e-14 | 73.2 |
MsG0180002947.01.T01 | MTR_6g042600 | 26.061 | 330 | 120 | 11 | 8 | 276 | 36 | 302 | 5.41e-14 | 72.4 |
MsG0180002947.01.T01 | MTR_7g091610 | 31.461 | 178 | 70 | 4 | 149 | 274 | 46 | 223 | 6.20e-14 | 70.9 |
MsG0180002947.01.T01 | MTR_7g050490 | 31.551 | 187 | 83 | 4 | 8 | 155 | 8 | 188 | 6.20e-14 | 69.7 |
MsG0180002947.01.T01 | MTR_6g007135 | 29.658 | 263 | 127 | 13 | 8 | 221 | 26 | 279 | 8.41e-14 | 72.0 |
MsG0180002947.01.T01 | MTR_2g029990 | 26.087 | 345 | 157 | 16 | 11 | 275 | 54 | 380 | 1.81e-13 | 70.9 |
MsG0180002947.01.T01 | MTR_1g097560 | 25.974 | 308 | 155 | 13 | 7 | 265 | 35 | 318 | 8.81e-13 | 68.9 |
MsG0180002947.01.T01 | MTR_2g060555 | 31.064 | 235 | 99 | 8 | 93 | 279 | 50 | 269 | 1.68e-12 | 67.0 |
MsG0180002947.01.T01 | MTR_2g017720 | 30.319 | 188 | 76 | 8 | 140 | 279 | 101 | 281 | 2.80e-12 | 67.4 |
MsG0180002947.01.T01 | MTR_8g062660 | 28.929 | 280 | 111 | 13 | 8 | 222 | 22 | 278 | 2.83e-12 | 67.8 |
MsG0180002947.01.T01 | MTR_2g021190 | 26.590 | 346 | 154 | 16 | 11 | 275 | 24 | 350 | 3.22e-12 | 67.0 |
MsG0180002947.01.T01 | MTR_3g010390 | 27.237 | 257 | 121 | 10 | 11 | 212 | 36 | 281 | 1.22e-11 | 65.5 |
MsG0180002947.01.T01 | MTR_3g013770 | 27.778 | 252 | 122 | 8 | 11 | 212 | 36 | 277 | 1.27e-11 | 65.5 |
MsG0180002947.01.T01 | MTR_4g055060 | 30.337 | 267 | 120 | 14 | 11 | 222 | 33 | 288 | 2.04e-11 | 64.7 |
MsG0180002947.01.T01 | MTR_6g048140 | 26.820 | 261 | 121 | 11 | 4 | 212 | 36 | 278 | 4.99e-11 | 63.5 |
MsG0180002947.01.T01 | MTR_3g096270 | 29.048 | 210 | 114 | 9 | 8 | 209 | 45 | 227 | 6.83e-11 | 62.4 |
MsG0180002947.01.T01 | MTR_1g046600 | 35.897 | 117 | 41 | 5 | 31 | 131 | 125 | 223 | 7.83e-11 | 62.4 |
MsG0180002947.01.T01 | MTR_4g030880 | 31.126 | 151 | 87 | 5 | 139 | 276 | 48 | 194 | 9.00e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 66 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTGTTGATTATGAATATT+TGG | 0.142483 | 1:-53651957 | MsG0180002947.01.T01:CDS |
TACTATTGTTTCTCTTGATT+TGG | 0.179900 | 1:-53652372 | MsG0180002947.01.T01:CDS |
AGAGGTGAAAATTCTCAATT+TGG | 0.182863 | 1:-53652537 | MsG0180002947.01.T01:CDS |
ACTATTGTTTCTCTTGATTT+GGG | 0.198282 | 1:-53652371 | MsG0180002947.01.T01:CDS |
CATGATTGCTCTTAAGTATA+AGG | 0.199587 | 1:+53652071 | None:intergenic |
ATATTTGGGTGATGTATATT+TGG | 0.248000 | 1:-53651942 | MsG0180002947.01.T01:CDS |
CCAGATGAAGTCCTGGTGGC+TGG | 0.281634 | 1:+53652671 | None:intergenic |
TTAAACACTGGCTCCGTGTT+TGG | 0.307419 | 1:-53652706 | MsG0180002947.01.T01:CDS |
TTGCCAACTATTAGTGTGTT+GGG | 0.312345 | 1:-53652290 | MsG0180002947.01.T01:CDS |
CACCACCACTTTATAAATTC+CGG | 0.338308 | 1:+53652583 | None:intergenic |
TTGAAACAATTCTCTATAAT+AGG | 0.340861 | 1:-53652045 | MsG0180002947.01.T01:CDS |
CCACCAAGGTCCAAAGTTAA+AGG | 0.342506 | 1:+53652470 | None:intergenic |
GAAGATTTCCACTTTGCCTT+TGG | 0.343986 | 1:-53652620 | MsG0180002947.01.T01:CDS |
GGCTCCGTGTTTGGAATGTT+TGG | 0.354527 | 1:-53652697 | MsG0180002947.01.T01:CDS |
AATTGAAGAAGAGATCTAAC+AGG | 0.373123 | 1:+53653042 | None:intergenic |
TCATCCTCAGAAAGAAATAA+TGG | 0.401536 | 1:+53652100 | None:intergenic |
CCCTACGATGACTCGGTTGC+CGG | 0.404777 | 1:-53653109 | None:intergenic |
CCAACTATAAAAGAGGCTTC+TGG | 0.411997 | 1:+53652767 | None:intergenic |
GAGGTGAAAATTCTCAATTT+GGG | 0.412841 | 1:-53652536 | MsG0180002947.01.T01:CDS |
AACAACGCTAGTTCTATTAT+CGG | 0.414795 | 1:+53651973 | None:intergenic |
TTTATAGTTGGTTCCTGCAA+TGG | 0.415590 | 1:-53652755 | MsG0180002947.01.T01:CDS |
ATTTGAGTGGCACTCTGAAC+TGG | 0.416363 | 1:-53652427 | MsG0180002947.01.T01:CDS |
GCTCCTTTAACTTTGGACCT+TGG | 0.433730 | 1:-53652473 | MsG0180002947.01.T01:CDS |
CTTGCCAACTATTAGTGTGT+TGG | 0.439154 | 1:-53652291 | MsG0180002947.01.T01:CDS |
ATGATTGCTCTTAAGTATAA+GGG | 0.439569 | 1:+53652072 | None:intergenic |
CCAGCCACCAGGACTTCATC+TGG | 0.440301 | 1:-53652671 | MsG0180002947.01.T01:CDS |
GTTGTTGATTATGAATATTT+GGG | 0.445944 | 1:-53651956 | MsG0180002947.01.T01:CDS |
TTTGGATGTGATAATTCAAC+CGG | 0.451723 | 1:-53652602 | MsG0180002947.01.T01:CDS |
TAAGCTTTCAACATAATCTT+CGG | 0.451790 | 1:+53651913 | None:intergenic |
GTGCCTCGTGGCTTTGATAA+AGG | 0.456458 | 1:-53652323 | MsG0180002947.01.T01:CDS |
CAGATGAAGTCCTGGTGGCT+GGG | 0.462600 | 1:+53652672 | None:intergenic |
TCCAAAGTTAAAGGAGCAAA+AGG | 0.463629 | 1:+53652479 | None:intergenic |
CCTTTAACTTTGGACCTTGG+TGG | 0.470915 | 1:-53652470 | MsG0180002947.01.T01:CDS |
GAAAATATGCTCTGTCATCA+AGG | 0.480824 | 1:+53652131 | None:intergenic |
GGAGACATACAATAAATTCA+TGG | 0.515165 | 1:-53652345 | MsG0180002947.01.T01:CDS |
AGATCGTCGGAGAGGTTCGC+CGG | 0.522891 | 1:+53653090 | None:intergenic |
TGTTTCTCTTGATTTGGGGA+CGG | 0.523807 | 1:-53652366 | MsG0180002947.01.T01:CDS |
TTCAACCGGAATTTATAAAG+TGG | 0.529639 | 1:-53652588 | MsG0180002947.01.T01:CDS |
CTATTGTTTCTCTTGATTTG+GGG | 0.539127 | 1:-53652370 | MsG0180002947.01.T01:CDS |
GACCCCAACACACTAATAGT+TGG | 0.540080 | 1:+53652287 | None:intergenic |
GCAGGAACCAACTATAAAAG+AGG | 0.551961 | 1:+53652760 | None:intergenic |
TGCCAACTATTAGTGTGTTG+GGG | 0.553140 | 1:-53652289 | MsG0180002947.01.T01:intron |
GAAGCCATTATTTCTTTCTG+AGG | 0.557872 | 1:-53652104 | MsG0180002947.01.T01:CDS |
GTCGATTATGTGTATTTGAG+TGG | 0.565069 | 1:-53652440 | MsG0180002947.01.T01:CDS |
GGTTGAATTATCACATCCAA+AGG | 0.578021 | 1:+53652604 | None:intergenic |
ATAACAGAACTAAGCGAACA+TGG | 0.579263 | 1:-53652018 | MsG0180002947.01.T01:CDS |
CTGATGGCGAATTTAAACAC+TGG | 0.585651 | 1:-53652718 | MsG0180002947.01.T01:CDS |
ATGTTTGGAACCCAGCCACC+AGG | 0.587183 | 1:-53652682 | MsG0180002947.01.T01:CDS |
AACCGGAATTTATAAAGTGG+TGG | 0.587786 | 1:-53652585 | MsG0180002947.01.T01:CDS |
TTCATAACCCTACGATGACT+CGG | 0.591965 | 1:-53653116 | None:intergenic |
GTGAAAATTCTCAATTTGGG+TGG | 0.592035 | 1:-53652533 | MsG0180002947.01.T01:CDS |
TATCACATCCAAAGGCAAAG+TGG | 0.609259 | 1:+53652612 | None:intergenic |
AGTGGAAATCTTCACCGCAA+TGG | 0.611388 | 1:+53652630 | None:intergenic |
CTAATAGTTGGCAAGTAAAG+CGG | 0.635118 | 1:+53652299 | None:intergenic |
GAGTGGCACTCTGAACTGGT+TGG | 0.646597 | 1:-53652423 | MsG0180002947.01.T01:CDS |
GGTTCCAAACATTCCAAACA+CGG | 0.653930 | 1:+53652693 | None:intergenic |
AATAAATTCATGGTGCCTCG+TGG | 0.655442 | 1:-53652335 | MsG0180002947.01.T01:CDS |
ATTGAAGAAGAGATCTAACA+GGG | 0.682088 | 1:+53653043 | None:intergenic |
AGGGAGAAATGAAAGTACCT+CGG | 0.683012 | 1:+53653062 | None:intergenic |
TACCTCGGCGATGAGATCGT+CGG | 0.684832 | 1:+53653077 | None:intergenic |
TAAGCAATTGAAAACAACAG+AGG | 0.687087 | 1:-53652555 | MsG0180002947.01.T01:CDS |
AATCGACATAATCGCCACCA+AGG | 0.689702 | 1:+53652456 | None:intergenic |
CGGCGATGAGATCGTCGGAG+AGG | 0.702275 | 1:+53653082 | None:intergenic |
CTCCGACGATCTCATCGCCG+AGG | 0.711170 | 1:-53653079 | MsG0180002947.01.T01:CDS |
TTTCGAATATACGATCGATG+GGG | 0.733330 | 1:+53652849 | None:intergenic |
GGACCTTTATCAAAGCCACG+AGG | 0.829042 | 1:+53652320 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAACTTACTTTCAAAAAT+TGG | + | Chr1:53653092-53653111 | None:intergenic | 20.0% |
!! | TATGGAAATAAGAAAAACAA+AGG | + | Chr1:53652717-53652736 | None:intergenic | 20.0% |
!! | TTGAAACAATTCTCTATAAT+AGG | - | Chr1:53652931-53652950 | MsG0180002947.01.T01:intron | 20.0% |
!!! | GTTGTTGATTATGAATATTT+GGG | - | Chr1:53653020-53653039 | MsG0180002947.01.T01:intron | 20.0% |
!!! | TTGTTTTTCTTATTTCCATA+AGG | - | Chr1:53652717-53652736 | MsG0180002947.01.T01:CDS | 20.0% |
! | ATACTTAAATGATGACATTG+AGG | - | Chr1:53652080-53652099 | MsG0180002947.01.T01:CDS | 25.0% |
! | ATATTTGGGTGATGTATATT+TGG | - | Chr1:53653034-53653053 | MsG0180002947.01.T01:intron | 25.0% |
! | ATGATTGCTCTTAAGTATAA+GGG | + | Chr1:53652907-53652926 | None:intergenic | 25.0% |
! | TAAGCTTTCAACATAATCTT+CGG | + | Chr1:53653066-53653085 | None:intergenic | 25.0% |
!! | AAAAGTTGGATTGGAAATTA+GGG | + | Chr1:53651986-53652005 | None:intergenic | 25.0% |
!! | ACTATTGTTTCTCTTGATTT+GGG | - | Chr1:53652605-53652624 | MsG0180002947.01.T01:CDS | 25.0% |
!! | CGTTGTTGATTATGAATATT+TGG | - | Chr1:53653019-53653038 | MsG0180002947.01.T01:intron | 25.0% |
!! | TACTATTGTTTCTCTTGATT+TGG | - | Chr1:53652604-53652623 | MsG0180002947.01.T01:CDS | 25.0% |
!! | TTTGAATATTTTCACCATTG+CGG | - | Chr1:53652332-53652351 | MsG0180002947.01.T01:CDS | 25.0% |
AAAAAGAATCAAACCATTGC+AGG | + | Chr1:53652237-53652256 | None:intergenic | 30.0% | |
AATTGAAGAAGAGATCTAAC+AGG | + | Chr1:53651937-53651956 | None:intergenic | 30.0% | |
AGAGGTGAAAATTCTCAATT+TGG | - | Chr1:53652439-53652458 | MsG0180002947.01.T01:CDS | 30.0% | |
AGAGTGAGAATCGTTAAAAA+CGG | + | Chr1:53652165-53652184 | None:intergenic | 30.0% | |
ATCTAGCAGATGAAGAAATT+TGG | - | Chr1:53652754-53652773 | MsG0180002947.01.T01:CDS | 30.0% | |
ATTGAAGAAGAGATCTAACA+GGG | + | Chr1:53651936-53651955 | None:intergenic | 30.0% | |
CAATTTCACAAAAGTTGGAT+TGG | + | Chr1:53651995-53652014 | None:intergenic | 30.0% | |
CATGATTGCTCTTAAGTATA+AGG | + | Chr1:53652908-53652927 | None:intergenic | 30.0% | |
GAGGTGAAAATTCTCAATTT+GGG | - | Chr1:53652440-53652459 | MsG0180002947.01.T01:CDS | 30.0% | |
GGAGACATACAATAAATTCA+TGG | - | Chr1:53652631-53652650 | MsG0180002947.01.T01:CDS | 30.0% | |
TAAGCAATTGAAAACAACAG+AGG | - | Chr1:53652421-53652440 | MsG0180002947.01.T01:CDS | 30.0% | |
TCATCCTCAGAAAGAAATAA+TGG | + | Chr1:53652879-53652898 | None:intergenic | 30.0% | |
TTCAACCGGAATTTATAAAG+TGG | - | Chr1:53652388-53652407 | MsG0180002947.01.T01:CDS | 30.0% | |
TTTGGATGTGATAATTCAAC+CGG | - | Chr1:53652374-53652393 | MsG0180002947.01.T01:CDS | 30.0% | |
! | AATTTGGAGTTGAACATTCT+TGG | - | Chr1:53652770-53652789 | MsG0180002947.01.T01:CDS | 30.0% |
! | CAAAAGTTGGATTGGAAATT+AGG | + | Chr1:53651987-53652006 | None:intergenic | 30.0% |
! | CTATTGTTTCTCTTGATTTG+GGG | - | Chr1:53652606-53652625 | MsG0180002947.01.T01:CDS | 30.0% |
! | GTTTTTGTGATTGTGATTTC+TGG | + | Chr1:53652023-53652042 | None:intergenic | 30.0% |
! | TTTTCGAATATACGATCGAT+GGG | + | Chr1:53652131-53652150 | None:intergenic | 30.0% |
!! | AACAACGCTAGTTCTATTAT+CGG | + | Chr1:53653006-53653025 | None:intergenic | 30.0% |
AACCGGAATTTATAAAGTGG+TGG | - | Chr1:53652391-53652410 | MsG0180002947.01.T01:CDS | 35.0% | |
AGAATCGTTAAAAACGGTGA+AGG | + | Chr1:53652159-53652178 | None:intergenic | 35.0% | |
AGGTGCAATTTCACAAAAGT+TGG | + | Chr1:53652000-53652019 | None:intergenic | 35.0% | |
ATAACAGAACTAAGCGAACA+TGG | - | Chr1:53652958-53652977 | MsG0180002947.01.T01:intron | 35.0% | |
CACCACCACTTTATAAATTC+CGG | + | Chr1:53652396-53652415 | None:intergenic | 35.0% | |
CATCTGCTAGATACAGAAAT+CGG | + | Chr1:53652746-53652765 | None:intergenic | 35.0% | |
CTAATAGTTGGCAAGTAAAG+CGG | + | Chr1:53652680-53652699 | None:intergenic | 35.0% | |
CTTAAATGATGACATTGAGG+AGG | - | Chr1:53652083-53652102 | MsG0180002947.01.T01:CDS | 35.0% | |
GAAAATATGCTCTGTCATCA+AGG | + | Chr1:53652848-53652867 | None:intergenic | 35.0% | |
GGTTGAATTATCACATCCAA+AGG | + | Chr1:53652375-53652394 | None:intergenic | 35.0% | |
GTCGATTATGTGTATTTGAG+TGG | - | Chr1:53652536-53652555 | MsG0180002947.01.T01:CDS | 35.0% | |
GTGAAAATTCTCAATTTGGG+TGG | - | Chr1:53652443-53652462 | MsG0180002947.01.T01:CDS | 35.0% | |
TCAGATGTGTGAGTAAATCT+TGG | - | Chr1:53651956-53651975 | MsG0180002947.01.T01:CDS | 35.0% | |
TCCAAAGTTAAAGGAGCAAA+AGG | + | Chr1:53652500-53652519 | None:intergenic | 35.0% | |
TTGCCAACTATTAGTGTGTT+GGG | - | Chr1:53652686-53652705 | MsG0180002947.01.T01:CDS | 35.0% | |
TTTCGAATATACGATCGATG+GGG | + | Chr1:53652130-53652149 | None:intergenic | 35.0% | |
! | AAATTTTCCAGATGAAGTCC+TGG | + | Chr1:53652315-53652334 | None:intergenic | 35.0% |
! | GAAGCCATTATTTCTTTCTG+AGG | - | Chr1:53652872-53652891 | MsG0180002947.01.T01:intron | 35.0% |
! | GGTTTGATTCTTTTTGCTGA+TGG | - | Chr1:53652242-53652261 | MsG0180002947.01.T01:intron | 35.0% |
! | GTTTTCGAATATACGATCGA+TGG | + | Chr1:53652132-53652151 | None:intergenic | 35.0% |
! | TACAGAAATCGGTTTCCTTA+TGG | + | Chr1:53652735-53652754 | None:intergenic | 35.0% |
! | TTTATAGTTGGTTCCTGCAA+TGG | - | Chr1:53652221-53652240 | MsG0180002947.01.T01:intron | 35.0% |
! | TTTGTGATTGTGATTTCTGG+AGG | + | Chr1:53652020-53652039 | None:intergenic | 35.0% |
!! | TCCTTTTGCTCCTTTAACTT+TGG | - | Chr1:53652496-53652515 | MsG0180002947.01.T01:CDS | 35.0% |
AATAAATTCATGGTGCCTCG+TGG | - | Chr1:53652641-53652660 | MsG0180002947.01.T01:CDS | 40.0% | |
ATGACATTGAGGAGGAATAC+AGG | - | Chr1:53652091-53652110 | MsG0180002947.01.T01:CDS | 40.0% | |
CCAACTATAAAAGAGGCTTC+TGG | + | Chr1:53652212-53652231 | None:intergenic | 40.0% | |
CGTTAAAAACGGTGAAGGAA+GGG | + | Chr1:53652154-53652173 | None:intergenic | 40.0% | |
CTTGCCAACTATTAGTGTGT+TGG | - | Chr1:53652685-53652704 | MsG0180002947.01.T01:CDS | 40.0% | |
GAAGATTTCCACTTTGCCTT+TGG | - | Chr1:53652356-53652375 | MsG0180002947.01.T01:CDS | 40.0% | |
GCAGGAACCAACTATAAAAG+AGG | + | Chr1:53652219-53652238 | None:intergenic | 40.0% | |
GGTTCCAAACATTCCAAACA+CGG | + | Chr1:53652286-53652305 | None:intergenic | 40.0% | |
TATCACATCCAAAGGCAAAG+TGG | + | Chr1:53652367-53652386 | None:intergenic | 40.0% | |
TCGTTAAAAACGGTGAAGGA+AGG | + | Chr1:53652155-53652174 | None:intergenic | 40.0% | |
TGACATTGAGGAGGAATACA+GGG | - | Chr1:53652092-53652111 | MsG0180002947.01.T01:CDS | 40.0% | |
TGCCAACTATTAGTGTGTTG+GGG | - | Chr1:53652687-53652706 | MsG0180002947.01.T01:CDS | 40.0% | |
! | CCAGAAGCCTCTTTTATAGT+TGG | - | Chr1:53652209-53652228 | MsG0180002947.01.T01:intron | 40.0% |
! | CTGATGGCGAATTTAAACAC+TGG | - | Chr1:53652258-53652277 | MsG0180002947.01.T01:intron | 40.0% |
!! | AGGGAGAAATGAAAGTACCT+CGG | + | Chr1:53651917-53651936 | None:intergenic | 40.0% |
!! | TGTTTCTCTTGATTTGGGGA+CGG | - | Chr1:53652610-53652629 | MsG0180002947.01.T01:CDS | 40.0% |
AATCGACATAATCGCCACCA+AGG | + | Chr1:53652523-53652542 | None:intergenic | 45.0% | |
AGTGGAAATCTTCACCGCAA+TGG | + | Chr1:53652349-53652368 | None:intergenic | 45.0% | |
ATTTGAGTGGCACTCTGAAC+TGG | - | Chr1:53652549-53652568 | MsG0180002947.01.T01:CDS | 45.0% | |
CCACCAAGGTCCAAAGTTAA+AGG | + | Chr1:53652509-53652528 | None:intergenic | 45.0% | |
GACCCCAACACACTAATAGT+TGG | + | Chr1:53652692-53652711 | None:intergenic | 45.0% | |
! | CCTTTAACTTTGGACCTTGG+TGG | - | Chr1:53652506-53652525 | MsG0180002947.01.T01:CDS | 45.0% |
! | GCTCCTTTAACTTTGGACCT+TGG | - | Chr1:53652503-53652522 | MsG0180002947.01.T01:CDS | 45.0% |
! | TTTTCCAGATGAAGTCCTGG+TGG | + | Chr1:53652312-53652331 | None:intergenic | 45.0% |
!! | TTAAACACTGGCTCCGTGTT+TGG | - | Chr1:53652270-53652289 | MsG0180002947.01.T01:intron | 45.0% |
GGACCTTTATCAAAGCCACG+AGG | + | Chr1:53652659-53652678 | None:intergenic | 50.0% | |
! | GGCTCCGTGTTTGGAATGTT+TGG | - | Chr1:53652279-53652298 | MsG0180002947.01.T01:intron | 50.0% |
!! | GTGCCTCGTGGCTTTGATAA+AGG | - | Chr1:53652653-53652672 | MsG0180002947.01.T01:CDS | 50.0% |
CAGATGAAGTCCTGGTGGCT+GGG | + | Chr1:53652307-53652326 | None:intergenic | 55.0% | |
GAGTGGCACTCTGAACTGGT+TGG | - | Chr1:53652553-53652572 | MsG0180002947.01.T01:CDS | 55.0% | |
TACCTCGGCGATGAGATCGT+CGG | + | Chr1:53651902-53651921 | None:intergenic | 55.0% | |
! | ATGTTTGGAACCCAGCCACC+AGG | - | Chr1:53652294-53652313 | MsG0180002947.01.T01:CDS | 55.0% |
AGATCGTCGGAGAGGTTCGC+CGG | + | Chr1:53651889-53651908 | None:intergenic | 60.0% | |
CCAGATGAAGTCCTGGTGGC+TGG | + | Chr1:53652308-53652327 | None:intergenic | 60.0% | |
CCAGCCACCAGGACTTCATC+TGG | - | Chr1:53652305-53652324 | MsG0180002947.01.T01:CDS | 60.0% | |
CGGCGATGAGATCGTCGGAG+AGG | + | Chr1:53651897-53651916 | None:intergenic | 65.0% | |
CTCCGACGATCTCATCGCCG+AGG | - | Chr1:53651897-53651916 | MsG0180002947.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 53651874 | 53653124 | 53651874 | ID=MsG0180002947.01;Name=MsG0180002947.01 |
Chr1 | mRNA | 53651874 | 53653124 | 53651874 | ID=MsG0180002947.01.T01;Parent=MsG0180002947.01;Name=MsG0180002947.01.T01;_AED=0.45;_eAED=0.47;_QI=0|0|0|1|1|1|3|0|325 |
Chr1 | exon | 53653035 | 53653124 | 53653035 | ID=MsG0180002947.01.T01:exon:8803;Parent=MsG0180002947.01.T01 |
Chr1 | exon | 53652290 | 53652885 | 53652290 | ID=MsG0180002947.01.T01:exon:8804;Parent=MsG0180002947.01.T01 |
Chr1 | exon | 53651874 | 53652165 | 53651874 | ID=MsG0180002947.01.T01:exon:8805;Parent=MsG0180002947.01.T01 |
Chr1 | CDS | 53653035 | 53653124 | 53653035 | ID=MsG0180002947.01.T01:cds;Parent=MsG0180002947.01.T01 |
Chr1 | CDS | 53652290 | 53652885 | 53652290 | ID=MsG0180002947.01.T01:cds;Parent=MsG0180002947.01.T01 |
Chr1 | CDS | 53651874 | 53652165 | 53651874 | ID=MsG0180002947.01.T01:cds;Parent=MsG0180002947.01.T01 |
Gene Sequence |
Protein sequence |