AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018887.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018887.01.T01 MTR_7g056503 52.247 356 162 5 1 354 1 350 7.41e-115 340
MsG0480018887.01.T01 MTR_7g062060 50.402 373 150 9 1 354 1 357 2.57e-109 326
MsG0480018887.01.T01 MTR_7g022600 40.833 360 172 8 5 336 6 352 7.45e-81 253
MsG0480018887.01.T01 MTR_7g057270 41.713 362 161 11 20 352 24 364 2.59e-80 252
MsG0480018887.01.T01 MTR_8g066440 41.076 353 175 12 5 338 7 345 1.68e-78 247
MsG0480018887.01.T01 MTR_4g013180 43.889 360 167 14 12 354 3 344 2.34e-76 243
MsG0480018887.01.T01 MTR_7g050520 42.308 338 171 8 1 333 1 319 1.54e-75 239
MsG0480018887.01.T01 MTR_1g088120 41.210 347 163 10 21 343 9 338 1.57e-75 239
MsG0480018887.01.T01 MTR_7g060940 37.731 379 179 11 1 355 1 346 4.20e-74 235
MsG0480018887.01.T01 MTR_7g091630 38.177 351 184 9 19 353 29 362 8.15e-74 236
MsG0480018887.01.T01 MTR_4g013185 41.828 361 151 12 20 341 8 348 1.09e-73 235
MsG0480018887.01.T01 MTR_7g050480 40.533 338 177 7 1 333 1 319 2.30e-72 231
MsG0480018887.01.T01 MTR_7g028660 40.351 342 151 10 21 338 10 322 5.25e-71 227
MsG0480018887.01.T01 MTR_7g078840 39.944 358 168 11 20 341 8 354 6.70e-71 228
MsG0480018887.01.T01 MTR_7g078900 38.719 359 175 10 15 344 5 347 8.37e-71 228
MsG0480018887.01.T01 MTR_7g056290 37.401 377 187 11 1 347 1 358 9.63e-71 227
MsG0480018887.01.T01 MTR_7g056390 37.097 372 185 11 6 347 2 354 1.36e-70 227
MsG0480018887.01.T01 MTR_7g066030 37.921 356 180 12 4 336 3 340 3.56e-70 225
MsG0480018887.01.T01 MTR_7g061060 39.412 340 161 10 16 336 7 320 5.17e-70 225
MsG0480018887.01.T01 MTR_2g047892 37.366 372 193 10 1 354 1 350 7.52e-70 224
MsG0480018887.01.T01 MTR_4g013175 40.947 359 157 10 20 341 8 348 1.10e-69 225
MsG0480018887.01.T01 MTR_7g091640 39.286 336 171 10 19 338 32 350 1.18e-69 223
MsG0480018887.01.T01 MTR_1g442850 42.090 335 150 10 20 336 3 311 1.63e-69 223
MsG0480018887.01.T01 MTR_0128s0020 40.230 348 174 11 9 342 4 331 4.06e-69 222
MsG0480018887.01.T01 MTR_4g024890 42.262 336 149 14 20 337 8 316 1.57e-68 221
MsG0480018887.01.T01 MTR_5g069760 40.491 326 164 10 19 336 3 306 1.63e-68 220
MsG0480018887.01.T01 MTR_2g043410 38.166 338 171 9 24 342 24 342 4.02e-68 221
MsG0480018887.01.T01 MTR_7g056760 38.544 371 197 12 1 354 1 357 7.19e-68 219
MsG0480018887.01.T01 MTR_7g052150 39.080 348 171 11 1 333 1 322 1.04e-67 219
MsG0480018887.01.T01 MTR_2g010900 39.937 318 165 8 40 342 1 307 1.23e-67 218
MsG0480018887.01.T01 MTR_7g055870 38.920 352 178 11 19 340 10 354 1.76e-67 219
MsG0480018887.01.T01 MTR_7g066100 39.881 336 172 9 19 336 8 331 3.88e-67 217
MsG0480018887.01.T01 MTR_6g055210 38.793 348 178 11 9 336 8 340 4.41e-67 219
MsG0480018887.01.T01 MTR_7g061090 37.047 359 190 9 5 343 6 348 4.64e-67 218
MsG0480018887.01.T01 MTR_7g055930 39.045 356 172 13 19 340 10 354 9.02e-67 217
MsG0480018887.01.T01 MTR_3g464500 39.718 355 170 12 19 353 24 354 2.11e-66 216
MsG0480018887.01.T01 MTR_7g056710 39.884 346 164 14 3 336 4 317 2.43e-66 215
MsG0480018887.01.T01 MTR_7g056737 39.714 350 173 13 2 340 3 325 3.59e-66 215
MsG0480018887.01.T01 MTR_7g055987 39.655 348 164 11 13 347 11 325 5.36e-66 213
MsG0480018887.01.T01 MTR_4g033495 40.476 336 159 12 20 336 25 338 2.16e-65 214
MsG0480018887.01.T01 MTR_7g061050 38.710 341 167 11 16 340 7 321 2.28e-65 212
MsG0480018887.01.T01 MTR_2g043400 37.209 344 166 8 24 342 25 343 3.29e-65 213
MsG0480018887.01.T01 MTR_7g056003 39.093 353 166 13 13 342 6 332 3.47e-65 213
MsG0480018887.01.T01 MTR_3g464470 38.393 336 163 9 19 337 4 312 6.44e-65 211
MsG0480018887.01.T01 MTR_7g056717 39.714 350 173 13 2 340 3 325 8.41e-65 211
MsG0480018887.01.T01 MTR_7g056260 40.426 329 149 12 24 332 16 317 1.37e-64 208
MsG0480018887.01.T01 MTR_7g078860 39.601 351 174 14 15 345 2 334 5.56e-64 209
MsG0480018887.01.T01 MTR_3g072470 36.898 374 178 13 13 356 10 355 7.09e-64 209
MsG0480018887.01.T01 MTR_7g078040 37.607 351 177 9 22 341 9 348 7.34e-64 210
MsG0480018887.01.T01 MTR_5g068040 36.769 359 170 11 3 345 1 318 2.88e-63 207
MsG0480018887.01.T01 MTR_2g010950 36.723 354 200 9 1 342 1 342 3.86e-63 207
MsG0480018887.01.T01 MTR_4g030090 36.490 359 189 9 18 353 10 352 1.75e-62 205
MsG0480018887.01.T01 MTR_4g011660 36.723 354 177 10 13 335 10 347 1.86e-62 206
MsG0480018887.01.T01 MTR_7g079160 36.313 358 186 10 20 340 6 358 2.46e-62 207
MsG0480018887.01.T01 MTR_0242s0060 37.644 348 172 12 20 341 7 335 3.01e-62 205
MsG0480018887.01.T01 MTR_0242s0040 37.644 348 172 12 20 341 7 335 3.01e-62 205
MsG0480018887.01.T01 MTR_7g077970 39.359 343 173 10 22 341 7 337 3.05e-62 205
MsG0480018887.01.T01 MTR_0128s0010 36.164 365 194 12 1 349 1 342 3.74e-62 204
MsG0480018887.01.T01 MTR_7g056570 40.000 345 166 12 3 336 4 318 1.06e-61 204
MsG0480018887.01.T01 MTR_1g071010 39.489 352 180 12 8 346 3 334 1.18e-61 203
MsG0480018887.01.T01 MTR_7g066000 36.011 361 202 12 1 345 1 348 1.75e-61 203
MsG0480018887.01.T01 MTR_4g031020 34.828 379 179 12 7 337 2 360 2.58e-61 203
MsG0480018887.01.T01 MTR_7g062100 37.500 344 185 9 3 335 4 328 1.04e-60 201
MsG0480018887.01.T01 MTR_5g069930 35.860 343 176 11 21 346 5 320 1.05e-60 200
MsG0480018887.01.T01 MTR_2g010920 35.342 365 203 9 1 339 1 358 1.30e-60 201
MsG0480018887.01.T01 MTR_7g077070 39.067 343 170 12 19 333 13 344 1.54e-60 201
MsG0480018887.01.T01 MTR_4g030830 35.989 364 189 12 15 354 2 345 1.85e-60 200
MsG0480018887.01.T01 MTR_7g056797 37.158 366 201 12 1 351 1 352 4.31e-60 199
MsG0480018887.01.T01 MTR_0707s0020 36.364 385 186 11 1 336 5 379 4.45e-60 200
MsG0480018887.01.T01 MTR_0128s0070 36.628 344 187 10 5 336 4 328 5.21e-60 199
MsG0480018887.01.T01 MTR_6g086920 36.364 385 186 11 1 336 17 391 1.09e-59 201
MsG0480018887.01.T01 MTR_7g060960 38.024 334 147 10 12 336 22 304 1.39e-59 197
MsG0480018887.01.T01 MTR_3g437520 36.314 369 166 13 24 347 25 369 1.71e-59 199
MsG0480018887.01.T01 MTR_5g056020 35.792 366 192 10 7 341 2 355 1.87e-59 200
MsG0480018887.01.T01 MTR_7g066850 37.110 353 180 12 1 336 1 328 2.54e-59 199
MsG0480018887.01.T01 MTR_6g016285 36.288 361 184 11 1 336 1 340 5.43e-59 197
MsG0480018887.01.T01 MTR_4g034860 39.506 324 143 11 51 344 51 351 5.78e-59 196
MsG0480018887.01.T01 MTR_3g080370 38.547 358 173 12 5 336 4 340 7.79e-59 197
MsG0480018887.01.T01 MTR_0649s0020 35.736 333 177 9 20 335 9 321 9.36e-59 195
MsG0480018887.01.T01 MTR_7g055977 37.615 327 170 8 21 335 6 310 1.70e-58 194
MsG0480018887.01.T01 MTR_0464s0020 35.884 379 191 14 5 347 4 366 2.47e-58 195
MsG0480018887.01.T01 MTR_4g019990 37.719 342 169 10 19 337 3 323 2.72e-58 194
MsG0480018887.01.T01 MTR_4g030980 35.165 364 170 11 22 337 15 360 6.81e-58 194
MsG0480018887.01.T01 MTR_7g061010 35.616 365 200 9 1 355 1 340 1.60e-57 192
MsG0480018887.01.T01 MTR_7g066840 37.571 354 176 14 15 349 17 344 1.87e-57 192
MsG0480018887.01.T01 MTR_4g129190 38.576 337 161 14 22 336 6 318 2.80e-57 191
MsG0480018887.01.T01 MTR_5g096710 36.047 344 187 8 19 349 20 343 9.47e-57 190
MsG0480018887.01.T01 MTR_7g066010 33.807 352 168 8 4 336 3 308 4.61e-56 188
MsG0480018887.01.T01 MTR_5g043160 34.734 357 186 10 14 336 42 385 9.55e-56 189
MsG0480018887.01.T01 MTR_7g077990 35.422 367 171 13 1 341 1 327 1.63e-55 187
MsG0480018887.01.T01 MTR_4g030110 35.967 367 183 11 2 351 10 341 2.59e-54 184
MsG0480018887.01.T01 MTR_7g070880 34.637 358 195 12 9 336 7 355 2.90e-54 184
MsG0480018887.01.T01 MTR_7g037670 38.608 316 161 9 1 311 1 288 4.32e-54 181
MsG0480018887.01.T01 MTR_7g070830 34.971 346 185 12 22 337 21 356 4.46e-54 184
MsG0480018887.01.T01 MTR_3g013470 37.461 323 154 12 41 346 14 305 9.42e-54 182
MsG0480018887.01.T01 MTR_1g047490 34.954 329 152 9 13 323 13 297 3.12e-53 179
MsG0480018887.01.T01 MTR_7g035295 34.659 352 173 12 25 361 19 328 5.86e-53 180
MsG0480018887.01.T01 MTR_7g022670 32.143 364 167 8 5 354 6 303 6.83e-53 179
MsG0480018887.01.T01 MTR_6g017280 37.237 333 174 11 22 339 9 321 7.04e-53 180
MsG0480018887.01.T01 MTR_4g008790 36.579 380 160 11 10 342 26 371 1.52e-52 181
MsG0480018887.01.T01 MTR_7g445890 37.500 328 158 11 22 336 16 309 1.69e-52 179
MsG0480018887.01.T01 MTR_4g129160 35.925 373 173 13 19 351 4 350 7.00e-52 177
MsG0480018887.01.T01 MTR_0097s0030 34.251 327 180 10 19 333 11 314 2.81e-51 176
MsG0480018887.01.T01 MTR_2g047240 34.251 327 180 10 19 333 11 314 2.81e-51 176
MsG0480018887.01.T01 MTR_2g047200 33.048 351 204 9 1 338 1 333 1.20e-50 174
MsG0480018887.01.T01 MTR_2g461450 34.125 337 189 10 5 341 3 306 1.22e-50 173
MsG0480018887.01.T01 MTR_7g445750 35.736 333 175 11 13 321 14 331 1.40e-50 172
MsG0480018887.01.T01 MTR_4g030790 34.254 362 168 11 7 357 7 309 5.17e-50 171
MsG0480018887.01.T01 MTR_7g056200 34.770 348 166 11 10 338 10 315 8.88e-50 172
MsG0480018887.01.T01 MTR_7g066060 33.708 356 198 11 1 336 2 339 1.18e-49 174
MsG0480018887.01.T01 MTR_7g052670 35.754 358 189 15 13 336 12 362 2.16e-49 172
MsG0480018887.01.T01 MTR_6g092560 35.714 336 172 13 22 336 12 324 2.35e-49 172
MsG0480018887.01.T01 MTR_7g056170 34.232 371 158 12 15 340 68 397 4.29e-49 172
MsG0480018887.01.T01 MTR_7g077910 38.686 274 135 10 88 344 5 262 1.57e-47 164
MsG0480018887.01.T01 MTR_2g047878 35.976 328 166 14 19 340 18 307 2.39e-47 165
MsG0480018887.01.T01 MTR_1g029650 35.312 337 184 10 20 341 6 323 5.47e-46 162
MsG0480018887.01.T01 MTR_7g070440 33.634 333 179 11 20 336 5 311 6.92e-46 161
MsG0480018887.01.T01 MTR_7g066080 33.140 344 186 12 16 336 10 332 1.21e-45 162
MsG0480018887.01.T01 MTR_1g015730 35.277 343 168 12 20 342 7 315 5.16e-45 159
MsG0480018887.01.T01 MTR_7g055830 32.754 345 141 10 19 340 10 286 1.61e-44 157
MsG0480018887.01.T01 MTR_7g056820 33.033 333 179 10 22 336 7 313 2.33e-44 157
MsG0480018887.01.T01 MTR_4g037465 31.412 347 200 9 6 336 3 327 3.37e-44 157
MsG0480018887.01.T01 MTR_0267s0050 35.015 337 182 13 18 336 3 320 2.40e-43 155
MsG0480018887.01.T01 MTR_2g047895 35.252 278 147 9 91 350 11 273 7.59e-43 152
MsG0480018887.01.T01 MTR_6g065510 43.204 206 90 7 142 336 73 262 1.87e-42 151
MsG0480018887.01.T01 MTR_7g113500 35.600 250 144 7 104 342 76 319 2.30e-42 152
MsG0480018887.01.T01 MTR_6g017295 38.462 273 140 11 75 335 1 257 3.48e-42 155
MsG0480018887.01.T01 MTR_7g009265 41.410 227 112 9 121 335 31 248 4.04e-42 150
MsG0480018887.01.T01 MTR_4g030760 34.431 334 172 14 19 342 70 366 5.75e-42 152
MsG0480018887.01.T01 MTR_7g050490 43.000 200 93 6 21 217 7 188 8.91e-42 145
MsG0480018887.01.T01 MTR_2g437110 34.030 335 177 12 21 336 21 330 1.11e-41 152
MsG0480018887.01.T01 MTR_2g006360 32.635 334 158 9 6 338 30 297 1.37e-41 149
MsG0480018887.01.T01 MTR_7g078940 34.226 336 160 12 22 314 32 349 3.63e-41 149
MsG0480018887.01.T01 MTR_3g013950 33.828 337 188 13 18 336 3 322 9.94e-41 148
MsG0480018887.01.T01 MTR_6g017305 39.904 208 108 7 133 332 5 203 8.90e-40 142
MsG0480018887.01.T01 MTR_1g112010 32.808 317 168 11 44 354 2 279 2.94e-39 142
MsG0480018887.01.T01 MTR_8g101940 31.845 336 174 12 22 339 2 300 1.15e-38 142
MsG0480018887.01.T01 MTR_2g021150 33.028 327 191 14 21 343 13 315 4.41e-38 140
MsG0480018887.01.T01 MTR_5g058620 42.045 176 95 3 173 342 30 204 4.98e-38 138
MsG0480018887.01.T01 MTR_1g058870 42.045 176 95 3 173 342 30 204 4.98e-38 138
MsG0480018887.01.T01 MTR_5g011350 36.905 252 117 10 71 311 26 246 5.92e-38 137
MsG0480018887.01.T01 MTR_5g069950 37.864 206 92 7 142 343 34 207 1.48e-37 135
MsG0480018887.01.T01 MTR_6g017270 32.515 326 143 11 24 339 11 269 2.12e-37 138
MsG0480018887.01.T01 MTR_7g055953 45.614 171 72 6 174 336 88 245 1.77e-36 135
MsG0480018887.01.T01 MTR_1g015740 32.710 321 136 10 20 335 6 251 2.70e-36 134
MsG0480018887.01.T01 MTR_6g088385 36.975 238 107 6 128 336 31 254 5.74e-36 134
MsG0480018887.01.T01 MTR_4g107820 32.326 331 179 14 16 337 30 324 6.57e-36 135
MsG0480018887.01.T01 MTR_4g107780 32.326 331 179 14 16 337 30 324 6.57e-36 135
MsG0480018887.01.T01 MTR_4g107780 32.326 331 179 14 16 337 30 324 1.35e-35 134
MsG0480018887.01.T01 MTR_4g107820 32.326 331 179 14 16 337 30 324 1.40e-35 134
MsG0480018887.01.T01 MTR_7g078960 41.791 201 101 8 138 334 15 203 1.74e-35 131
MsG0480018887.01.T01 MTR_4g024870 34.602 289 141 12 9 276 37 298 1.30e-34 132
MsG0480018887.01.T01 MTR_7g056173 43.094 181 84 5 172 339 23 197 1.64e-34 130
MsG0480018887.01.T01 MTR_2g055970 30.678 339 188 11 9 335 198 501 3.56e-34 133
MsG0480018887.01.T01 MTR_1g097560 30.769 338 192 12 6 339 20 319 8.00e-33 126
MsG0480018887.01.T01 MTR_4g128320 38.785 214 93 8 136 342 36 218 9.10e-33 124
MsG0480018887.01.T01 MTR_2g027820 32.441 299 126 10 40 333 1 228 1.70e-32 124
MsG0480018887.01.T01 MTR_7g056023 31.908 304 141 11 21 313 29 277 6.66e-32 121
MsG0480018887.01.T01 MTR_7g055850 36.538 208 111 7 19 207 10 215 2.60e-30 117
MsG0480018887.01.T01 MTR_7g034310 44.379 169 75 7 174 336 15 170 2.81e-30 116
MsG0480018887.01.T01 MTR_7g061100 33.457 269 120 10 16 277 7 223 8.61e-30 117
MsG0480018887.01.T01 MTR_8g467140 30.000 320 175 12 21 327 31 314 1.78e-29 116
MsG0480018887.01.T01 MTR_5g022420 29.721 323 176 13 21 335 26 305 2.47e-29 117
MsG0480018887.01.T01 MTR_2g046920 28.955 335 203 12 21 348 23 329 3.06e-29 116
MsG0480018887.01.T01 MTR_7g030040 32.278 316 107 12 1 302 42 264 3.47e-29 115
MsG0480018887.01.T01 MTR_2g017720 29.595 321 133 12 57 356 7 255 5.47e-29 117
MsG0480018887.01.T01 MTR_5g011200 31.013 316 184 14 22 330 17 305 1.72e-28 114
MsG0480018887.01.T01 MTR_4g108820 30.030 333 163 12 7 335 27 293 8.32e-28 111
MsG0480018887.01.T01 MTR_4g020000 38.122 181 93 7 175 343 112 285 1.50e-27 111
MsG0480018887.01.T01 MTR_8g069515 40.278 144 78 3 24 159 18 161 1.68e-27 107
MsG0480018887.01.T01 MTR_4g006350 27.793 367 212 15 20 358 492 833 1.78e-27 114
MsG0480018887.01.T01 MTR_7g091610 46.154 117 51 4 238 344 72 186 4.41e-27 108
MsG0480018887.01.T01 MTR_2g029990 29.524 315 191 13 23 332 52 340 4.53e-27 111
MsG0480018887.01.T01 MTR_2g046900 29.738 343 198 15 21 348 27 341 4.71e-27 110
MsG0480018887.01.T01 MTR_3g013740 30.539 334 198 14 12 333 34 345 5.72e-27 110
MsG0480018887.01.T01 MTR_1g054575 26.687 326 206 9 12 335 42 336 1.78e-26 111
MsG0480018887.01.T01 MTR_3g083640 27.697 343 190 15 7 337 45 341 2.47e-26 108
MsG0480018887.01.T01 MTR_5g007610 28.743 334 179 14 22 332 41 338 2.50e-26 108
MsG0480018887.01.T01 MTR_2g021190 28.531 354 214 13 6 350 5 328 2.62e-26 108
MsG0480018887.01.T01 MTR_3g007330 28.371 356 210 13 22 370 48 365 3.52e-26 108
MsG0480018887.01.T01 MTR_1g094210 26.923 312 191 12 21 330 56 332 3.82e-26 108
MsG0480018887.01.T01 MTR_3g006530 27.195 353 209 14 22 360 40 358 3.96e-26 108
MsG0480018887.01.T01 MTR_1g094210 26.923 312 191 12 21 330 56 332 4.48e-26 108
MsG0480018887.01.T01 MTR_4g061340 27.744 328 184 12 22 332 26 317 9.31e-26 107
MsG0480018887.01.T01 MTR_7g013590 27.717 368 231 15 6 365 18 358 1.03e-25 107
MsG0480018887.01.T01 MTR_3g007360 27.900 319 188 11 25 333 55 341 1.29e-25 107
MsG0480018887.01.T01 MTR_7g061940 38.462 169 92 5 178 345 79 236 3.09e-25 103
MsG0480018887.01.T01 MTR_1g097490 27.697 343 195 12 7 336 33 335 4.30e-25 105
MsG0480018887.01.T01 MTR_3g007410 27.900 319 188 11 25 333 55 341 4.80e-25 105
MsG0480018887.01.T01 MTR_2g046800 28.531 354 184 18 17 333 9 330 5.87e-25 105
MsG0480018887.01.T01 MTR_6g007135 24.725 364 239 11 3 354 7 347 6.11e-25 105
MsG0480018887.01.T01 MTR_6g053260 28.660 321 188 14 22 332 337 626 7.36e-25 106
MsG0480018887.01.T01 MTR_2g060555 34.259 216 110 9 128 333 30 223 8.38e-25 102
MsG0480018887.01.T01 MTR_3g024040 29.677 310 171 15 30 333 39 307 1.10e-24 103
MsG0480018887.01.T01 MTR_6g004660 27.164 335 210 13 10 332 4 316 2.78e-24 103
MsG0480018887.01.T01 MTR_1g050542 27.103 321 195 12 19 335 55 340 4.07e-24 102
MsG0480018887.01.T01 MTR_8g062660 29.814 322 175 14 21 324 21 309 6.34e-24 103
MsG0480018887.01.T01 MTR_4g031770 27.078 373 203 21 22 363 4 338 6.79e-24 101
MsG0480018887.01.T01 MTR_4g055060 28.652 356 197 16 22 357 30 348 2.39e-23 100
MsG0480018887.01.T01 MTR_2g021155 28.616 318 184 13 25 332 39 323 2.84e-23 102
MsG0480018887.01.T01 MTR_2g021155 29.231 195 116 8 144 332 710 888 3.69e-12 68.2
MsG0480018887.01.T01 MTR_2g078900 25.627 359 211 13 6 350 17 333 2.90e-23 99.8
MsG0480018887.01.T01 MTR_2g078850 27.729 339 194 15 25 350 33 333 3.30e-23 99.8
MsG0480018887.01.T01 MTR_6g053240 27.607 326 194 14 22 334 28 324 3.48e-23 100
MsG0480018887.01.T01 MTR_7g066830 35.484 186 92 6 42 220 15 179 3.84e-23 95.9
MsG0480018887.01.T01 MTR_3g010390 28.614 332 187 14 22 331 33 336 3.91e-23 100
MsG0480018887.01.T01 MTR_3g436150 29.412 323 197 12 22 333 32 334 4.38e-23 99.8
MsG0480018887.01.T01 MTR_6g081280 35.196 179 88 7 175 342 17 178 5.48e-23 96.7
MsG0480018887.01.T01 MTR_3g014540 29.012 324 186 15 22 334 29 319 5.74e-23 99.4
MsG0480018887.01.T01 MTR_8g030660 31.250 240 124 8 18 225 23 253 7.82e-23 97.1
MsG0480018887.01.T01 MTR_7g022580 42.857 126 57 4 61 183 1 114 1.09e-22 94.0
MsG0480018887.01.T01 MTR_3g007430 27.457 346 205 12 25 356 46 359 1.27e-22 98.6
MsG0480018887.01.T01 MTR_2g047832 27.353 340 204 13 21 341 28 343 1.68e-22 98.6
MsG0480018887.01.T01 MTR_1g046600 36.416 173 73 5 45 195 70 227 1.72e-22 96.7
MsG0480018887.01.T01 MTR_3g010870 25.000 344 201 12 22 354 37 334 2.40e-22 97.4
MsG0480018887.01.T01 MTR_1g097330 27.554 323 200 12 14 333 9 300 2.45e-22 97.8
MsG0480018887.01.T01 MTR_4g006840 30.153 262 123 11 25 272 2 217 2.56e-22 94.7
MsG0480018887.01.T01 MTR_5g057710 28.653 349 204 15 22 357 46 362 2.68e-22 97.4
MsG0480018887.01.T01 MTR_5g046300 26.837 313 196 13 22 332 4 285 4.04e-22 96.7
MsG0480018887.01.T01 MTR_5g046290 26.837 313 196 13 22 332 4 285 4.04e-22 96.7
MsG0480018887.01.T01 MTR_7g006360 34.653 202 73 7 17 218 6 148 4.23e-22 95.5
MsG0480018887.01.T01 MTR_7g006360 48.235 85 39 2 266 346 138 221 1.57e-15 76.6
MsG0480018887.01.T01 MTR_2g426090 26.479 355 220 12 25 356 9 345 4.38e-22 97.1
MsG0480018887.01.T01 MTR_3g014570 29.483 329 188 14 22 339 29 324 5.05e-22 96.7
MsG0480018887.01.T01 MTR_3g006670 27.692 325 192 14 22 336 49 340 5.30e-22 97.1
MsG0480018887.01.T01 MTR_7g407070 28.000 350 207 14 22 350 32 357 9.00e-22 96.3
MsG0480018887.01.T01 MTR_5g057790 27.532 316 195 11 22 332 46 332 9.56e-22 95.9
MsG0480018887.01.T01 MTR_4g021785 26.730 318 182 11 21 328 8 284 1.02e-21 95.5
MsG0480018887.01.T01 MTR_7g070900 37.714 175 67 5 173 336 234 377 1.29e-21 96.3
MsG0480018887.01.T01 MTR_7g070900 29.956 227 110 7 10 229 3 187 9.61e-20 90.9
MsG0480018887.01.T01 MTR_8g101580 28.571 322 191 13 22 335 45 335 2.38e-21 94.7
MsG0480018887.01.T01 MTR_3g024150 28.302 318 177 14 25 330 38 316 2.39e-21 94.7
MsG0480018887.01.T01 MTR_3g034130 28.182 330 199 13 15 331 2 306 2.64e-21 94.4
MsG0480018887.01.T01 MTR_6g065980 28.173 323 182 13 19 336 13 290 2.91e-21 94.4
MsG0480018887.01.T01 MTR_3g030250 25.581 344 194 13 22 354 37 329 3.41e-21 94.4
MsG0480018887.01.T01 MTR_7g058630 47.059 102 51 2 243 342 17 117 3.60e-21 90.1
MsG0480018887.01.T01 MTR_4g024910 36.709 158 80 5 40 193 1 142 4.04e-21 93.2
MsG0480018887.01.T01 MTR_2g046830 26.444 329 201 11 21 341 24 319 4.41e-21 94.4
MsG0480018887.01.T01 MTR_3g011100 27.795 331 181 11 22 332 235 527 5.23e-21 95.1
MsG0480018887.01.T01 MTR_3g030350 25.215 349 214 13 22 359 35 347 8.56e-21 93.2
MsG0480018887.01.T01 MTR_3g036290 28.840 319 172 14 22 331 22 294 8.92e-21 92.8
MsG0480018887.01.T01 MTR_3g007270 28.086 324 201 14 22 336 47 347 1.50e-20 92.8
MsG0480018887.01.T01 MTR_3g036335 27.778 342 198 17 22 350 41 346 1.67e-20 92.4
MsG0480018887.01.T01 MTR_7g078050 40.000 140 72 5 22 158 6 136 1.89e-20 89.7
MsG0480018887.01.T01 MTR_3g024130 31.556 225 125 9 121 339 58 259 1.98e-20 91.3
MsG0480018887.01.T01 MTR_1g055135 28.972 321 186 14 21 328 12 303 2.62e-20 91.7
MsG0480018887.01.T01 MTR_7g021580 33.047 233 105 10 21 248 32 218 2.66e-20 90.5
MsG0480018887.01.T01 MTR_7g066040 35.165 182 94 7 116 277 20 197 3.78e-20 89.0
MsG0480018887.01.T01 MTR_6g027910 28.349 321 193 13 25 330 12 310 4.03e-20 91.3
MsG0480018887.01.T01 MTR_7g007300 27.941 340 193 15 22 354 103 397 4.14e-20 91.7
MsG0480018887.01.T01 MTR_8g030630 39.024 123 66 2 222 336 70 191 6.53e-20 90.9
MsG0480018887.01.T01 MTR_8g030630 37.594 133 63 4 203 335 281 393 1.88e-17 84.0
MsG0480018887.01.T01 MTR_3g009260 26.282 312 191 10 25 332 44 320 7.45e-20 90.5
MsG0480018887.01.T01 MTR_3g030330 27.273 341 201 14 22 354 20 321 7.45e-20 90.1
MsG0480018887.01.T01 MTR_3g013770 28.000 350 183 15 5 330 19 323 7.61e-20 90.5
MsG0480018887.01.T01 MTR_1g054725 26.398 322 197 14 22 332 20 312 8.67e-20 90.1
MsG0480018887.01.T01 MTR_4g023090 27.044 318 200 12 21 333 15 305 1.28e-19 89.7
MsG0480018887.01.T01 MTR_6g042600 34.444 180 78 6 14 190 28 170 1.38e-19 89.7
MsG0480018887.01.T01 MTR_6g042600 48.810 84 42 1 253 336 171 253 3.11e-19 89.0
MsG0480018887.01.T01 MTR_3g030310 25.000 328 197 14 22 334 21 314 1.42e-19 89.7
MsG0480018887.01.T01 MTR_3g024110 26.190 336 195 16 22 349 101 391 1.93e-19 89.7
MsG0480018887.01.T01 MTR_2g028140 25.135 370 228 15 19 355 2 355 2.16e-19 89.4
MsG0480018887.01.T01 MTR_3g010590 24.843 318 184 13 22 330 39 310 2.93e-19 88.6
MsG0480018887.01.T01 MTR_3g009310 26.923 312 200 9 22 331 42 327 3.16e-19 88.6
MsG0480018887.01.T01 MTR_0044s0300 25.291 344 214 14 15 350 31 339 3.97e-19 88.2
MsG0480018887.01.T01 MTR_3g011060 27.469 324 197 15 22 332 28 326 4.65e-19 88.2
MsG0480018887.01.T01 MTR_2g021252 28.213 319 176 13 25 334 50 324 5.03e-19 88.2
MsG0480018887.01.T01 MTR_3g011020 27.164 335 187 14 12 333 18 308 5.63e-19 87.8
MsG0480018887.01.T01 MTR_2g048580 25.915 328 190 13 16 334 2 285 7.28e-19 87.0
MsG0480018887.01.T01 MTR_7g070937 38.931 131 68 4 175 294 11 140 9.55e-19 83.2
MsG0480018887.01.T01 MTR_1g058190 25.872 344 172 14 11 332 24 306 1.59e-18 86.3
MsG0480018887.01.T01 MTR_3g034160 25.915 328 197 11 21 331 8 306 1.66e-18 86.3
MsG0480018887.01.T01 MTR_7g056727 40.559 143 62 6 62 193 3 133 1.95e-18 84.0
MsG0480018887.01.T01 MTR_3g006570 24.699 332 220 10 22 350 21 325 2.36e-18 85.9
MsG0480018887.01.T01 MTR_3g034180 27.596 337 198 13 21 340 122 429 2.82e-18 86.7
MsG0480018887.01.T01 MTR_5g046260 26.393 341 175 17 22 351 4 279 3.67e-18 84.3
MsG0480018887.01.T01 MTR_4g023080 25.472 318 191 13 21 331 8 286 5.85e-18 84.7
MsG0480018887.01.T01 MTR_2g079810 27.308 260 140 9 25 267 9 236 7.29e-18 83.6
MsG0480018887.01.T01 MTR_2g010935 33.742 163 87 5 181 341 43 186 9.08e-18 82.4
MsG0480018887.01.T01 MTR_4g053510 37.209 129 69 2 6 129 6 127 1.01e-17 79.0
MsG0480018887.01.T01 MTR_3g010520 24.478 335 201 11 22 354 25 309 1.12e-17 84.0
MsG0480018887.01.T01 MTR_2g025420 24.706 340 224 11 22 341 6 333 1.16e-17 84.3
MsG0480018887.01.T01 MTR_3g010970 26.923 312 180 13 25 330 51 320 1.21e-17 84.0
MsG0480018887.01.T01 MTR_2g028110 26.361 349 221 12 20 355 2 327 1.38e-17 83.6
MsG0480018887.01.T01 MTR_2g426060 24.202 376 232 15 22 369 6 356 1.42e-17 84.0
MsG0480018887.01.T01 MTR_8g099460 24.857 350 213 14 22 354 5 321 1.65e-17 83.6
MsG0480018887.01.T01 MTR_3g058480 27.798 277 164 12 13 278 31 282 2.53e-17 82.4
MsG0480018887.01.T01 MTR_2g021210 28.308 325 201 12 8 332 70 362 3.23e-17 83.2
MsG0480018887.01.T01 MTR_2g028160 25.767 326 218 12 19 330 2 317 5.95e-17 82.0
MsG0480018887.01.T01 MTR_4g063955 34.043 188 101 6 13 190 16 190 6.11e-17 80.5
MsG0480018887.01.T01 MTR_8g433040 25.796 314 199 9 19 330 15 296 8.55e-17 81.3
MsG0480018887.01.T01 MTR_8g032380 25.796 314 199 9 19 330 15 296 8.55e-17 81.3
MsG0480018887.01.T01 MTR_4g133170 23.599 339 210 13 20 343 2 306 9.44e-17 81.3
MsG0480018887.01.T01 MTR_4g023070 26.752 314 194 12 22 328 3 287 1.04e-16 81.3
MsG0480018887.01.T01 MTR_2g043420 34.783 138 76 3 1 131 4 134 1.05e-16 77.0
MsG0480018887.01.T01 MTR_3g010920 25.680 331 196 14 6 330 24 310 1.09e-16 81.3
MsG0480018887.01.T01 MTR_1g068835 24.706 340 217 13 22 354 4 311 1.09e-16 81.3
MsG0480018887.01.T01 MTR_6g460450 40.171 117 60 2 21 132 28 139 1.25e-16 76.6
MsG0480018887.01.T01 MTR_1g056710 27.103 321 186 17 22 330 34 318 1.32e-16 80.9
MsG0480018887.01.T01 MTR_2g031680 24.451 319 205 11 19 330 3 292 1.37e-16 80.9
MsG0480018887.01.T01 MTR_0760s0010 25.762 361 207 16 1 344 20 336 1.53e-16 80.9
MsG0480018887.01.T01 MTR_3g058470 26.814 317 174 11 22 330 37 303 2.12e-16 80.1
MsG0480018887.01.T01 MTR_8g073550 28.384 229 130 9 21 240 29 232 2.43e-16 77.8
MsG0480018887.01.T01 MTR_2g031720 24.927 341 223 13 21 354 5 319 2.90e-16 80.1
MsG0480018887.01.T01 MTR_2g028130 26.149 348 215 15 19 346 2 327 3.65e-16 79.7
MsG0480018887.01.T01 MTR_1g115160 27.492 331 187 17 12 332 12 299 4.68e-16 79.0
MsG0480018887.01.T01 MTR_2g425980 24.309 362 222 14 22 353 5 344 4.79e-16 79.3
MsG0480018887.01.T01 MTR_7g078880 29.891 184 83 6 189 360 93 242 5.18e-16 79.3
MsG0480018887.01.T01 MTR_3g103020 25.776 322 212 9 21 339 19 316 5.68e-16 79.0
MsG0480018887.01.T01 MTR_2g426020 25.077 323 207 13 22 330 6 307 5.86e-16 79.0
MsG0480018887.01.T01 MTR_2g021050 24.793 363 199 15 19 353 2 318 6.55e-16 79.0
MsG0480018887.01.T01 MTR_4g023120 27.044 318 188 13 22 328 3 287 7.27e-16 78.6
MsG0480018887.01.T01 MTR_6g021880 24.841 314 202 14 33 335 31 321 7.28e-16 78.6
MsG0480018887.01.T01 MTR_1g055055 25.150 334 189 16 22 348 26 305 1.17e-15 77.8
MsG0480018887.01.T01 MTR_5g070380 36.283 113 58 3 51 156 45 150 1.37e-15 74.7
MsG0480018887.01.T01 MTR_5g070130 24.695 328 215 9 21 339 10 314 2.71e-15 77.0
MsG0480018887.01.T01 MTR_3g010430 26.727 333 192 14 22 339 36 331 2.76e-15 77.0
MsG0480018887.01.T01 MTR_3g058440 25.914 301 165 12 22 302 35 297 2.88e-15 76.3
MsG0480018887.01.T01 MTR_6g048140 25.680 331 186 16 22 332 39 329 2.92e-15 77.0
MsG0480018887.01.T01 MTR_3g036430 24.096 332 191 12 22 350 20 293 3.29e-15 76.3
MsG0480018887.01.T01 MTR_4g109280 28.710 310 182 13 22 326 8 283 3.92e-15 76.3
MsG0480018887.01.T01 MTR_4g116330 26.513 347 194 14 1 328 1 305 4.11e-15 76.3
MsG0480018887.01.T01 MTR_3g023930 24.405 336 199 14 22 354 34 317 4.20e-15 76.3
MsG0480018887.01.T01 MTR_6g004210 24.390 328 197 12 33 332 36 340 4.99e-15 76.3
MsG0480018887.01.T01 MTR_3g006500 24.781 343 208 14 22 354 17 319 5.41e-15 75.9
MsG0480018887.01.T01 MTR_7g058660 50.000 74 33 1 116 189 14 83 5.88e-15 73.6
MsG0480018887.01.T01 MTR_4g117780 26.282 312 203 12 22 331 11 297 6.76e-15 75.5
MsG0480018887.01.T01 MTR_0128s0110 35.577 104 59 2 240 336 34 136 8.54e-15 73.2
MsG0480018887.01.T01 MTR_8g033110 24.665 373 221 13 19 347 11 367 8.89e-15 75.5
MsG0480018887.01.T01 MTR_5g070088 26.331 338 198 12 20 332 5 316 1.17e-14 75.1
MsG0480018887.01.T01 MTR_3g010620 27.187 320 166 18 25 330 39 305 1.27e-14 75.1
MsG0480018887.01.T01 MTR_4g109270 27.215 316 185 16 22 326 8 289 1.35e-14 74.7
MsG0480018887.01.T01 MTR_0064s0060 37.607 117 60 2 19 129 14 123 2.57e-14 70.1
MsG0480018887.01.T01 MTR_5g070080 24.924 329 210 13 21 332 9 317 2.64e-14 73.9
MsG0480018887.01.T01 MTR_5g009060 26.243 362 222 16 8 341 11 355 2.80e-14 73.9
MsG0480018887.01.T01 MTR_5g057643 30.693 202 118 8 22 218 46 230 3.79e-14 72.4
MsG0480018887.01.T01 MTR_7g089830 40.000 110 42 3 236 339 7 98 4.51e-14 69.3
MsG0480018887.01.T01 MTR_4g070550 24.267 375 220 16 19 355 2 350 5.61e-14 73.2
MsG0480018887.01.T01 MTR_7g017040 26.225 347 197 15 12 324 6 327 7.67e-14 72.8
MsG0480018887.01.T01 MTR_1g068875 23.615 343 220 12 20 354 2 310 7.78e-14 72.4
MsG0480018887.01.T01 MTR_6g048120 23.476 328 211 13 22 336 36 336 1.45e-13 72.0
MsG0480018887.01.T01 MTR_3g011650 29.386 228 128 10 25 247 82 281 1.47e-13 70.9
MsG0480018887.01.T01 MTR_8g033090 23.656 372 224 15 19 347 11 365 1.84e-13 71.6
MsG0480018887.01.T01 MTR_2g046860 30.088 226 134 8 120 341 6 211 2.10e-13 70.9
MsG0480018887.01.T01 MTR_4g117850 26.752 314 187 18 22 325 23 303 2.75e-13 70.9
MsG0480018887.01.T01 MTR_7g016930 24.118 340 182 15 15 324 9 302 4.19e-13 70.1
MsG0480018887.01.T01 MTR_7g445580 48.387 62 31 1 274 335 42 102 4.33e-13 66.6
MsG0480018887.01.T01 MTR_4g121580 28.814 236 142 11 21 246 10 229 4.59e-13 70.1
MsG0480018887.01.T01 MTR_7g077930 44.156 77 42 1 7 82 4 80 1.32e-12 63.9
MsG0480018887.01.T01 MTR_3g007300 26.667 315 168 14 22 332 49 304 1.44e-12 68.6
MsG0480018887.01.T01 MTR_4g089125 50.000 58 29 0 21 78 11 68 1.64e-12 63.5
MsG0480018887.01.T01 MTR_5g057040 33.163 196 109 9 22 212 46 224 1.68e-12 69.3
MsG0480018887.01.T01 MTR_2g435950 27.132 258 135 13 111 347 36 261 2.46e-12 67.4
MsG0480018887.01.T01 MTR_6g060650 25.076 327 199 12 21 331 7 303 2.64e-12 67.8
MsG0480018887.01.T01 MTR_3g010450 25.954 262 152 9 30 286 5 229 4.64e-12 65.9
MsG0480018887.01.T01 MTR_5g022090 21.914 324 189 11 22 331 34 307 4.80e-12 67.4
MsG0480018887.01.T01 MTR_3g010870 23.605 233 139 6 22 246 37 238 5.06e-12 66.6
MsG0480018887.01.T01 MTR_0831s0010 24.784 347 217 15 7 331 33 357 5.33e-12 67.0
MsG0480018887.01.T01 MTR_3g009250 27.753 227 132 8 25 247 44 242 5.70e-12 65.5
MsG0480018887.01.T01 MTR_1g112930 23.342 377 232 15 4 371 15 343 6.01e-12 66.6
MsG0480018887.01.T01 MTR_7g079370 27.215 316 173 14 38 331 7 287 6.05e-12 66.6
MsG0480018887.01.T01 MTR_4g013190 33.043 115 46 3 67 158 10 116 4.47e-11 60.1
MsG0480018887.01.T01 MTR_3g023940 22.981 322 200 11 22 330 34 320 5.77e-11 63.9
MsG0480018887.01.T01 MTR_2g078870 30.189 212 118 12 122 332 56 238 7.24e-11 63.2
MsG0480018887.01.T01 MTR_3g083660 24.859 177 112 5 172 348 73 228 7.85e-11 62.8
MsG0480018887.01.T01 MTR_4g023440 26.250 240 134 10 21 249 17 224 9.32e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018887.01.T01 AT4G12560 28.099 363 203 13 20 353 2 335 1.92e-29 118
MsG0480018887.01.T01 AT4G12560 28.099 363 203 13 20 353 2 335 1.92e-29 118
MsG0480018887.01.T01 AT4G12560 28.099 363 203 13 20 353 2 335 1.92e-29 118
MsG0480018887.01.T01 AT3G06240 25.556 360 217 13 1 326 12 354 3.45e-21 94.7
MsG0480018887.01.T01 AT4G22390 26.284 331 191 12 20 330 2 299 3.66e-17 82.8
MsG0480018887.01.T01 AT4G22390 26.284 331 191 12 20 330 2 299 3.81e-17 82.8
MsG0480018887.01.T01 AT3G23880 23.585 318 204 12 22 330 14 301 2.22e-13 71.2
MsG0480018887.01.T01 AT3G49980 25.843 267 157 10 22 278 6 241 1.18e-11 65.9
MsG0480018887.01.T01 AT3G49980 25.843 267 157 10 22 278 5 240 1.20e-11 65.9

Find 70 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACCCAAACTGAAAATTT+TGG 0.174181 4:-11113244 None:intergenic
ACCAACTATAAGTGTGTTAA+TGG 0.187797 4:+11113500 MsG0480018887.01.T01:CDS
TGTTATTATTTCACTTAATC+TGG 0.199909 4:+11113413 MsG0480018887.01.T01:CDS
ATATGGCGAATGACGGAATT+TGG 0.236863 4:+11113567 MsG0480018887.01.T01:CDS
ATCAAACTCATATTGTAATA+TGG 0.257567 4:+11113550 MsG0480018887.01.T01:CDS
AAGTGCAATTTCACGAAGTT+AGG 0.318493 4:-11112799 None:intergenic
GTAGTGGCGATAAAATTTAA+TGG 0.346788 4:+11113198 MsG0480018887.01.T01:CDS
TACACATCTCATTCGCATAA+AGG 0.350092 4:-11112746 None:intergenic
ATGGCGTCGTATAAAGTCTT+TGG 0.352561 4:-11113688 None:intergenic
AGATCTATCAAGTTCACATT+TGG 0.381849 4:+11113147 MsG0480018887.01.T01:CDS
CGAATGACCTTGTCGTCGAT+TGG 0.384846 4:-11112967 None:intergenic
ACTACAGTGATGAGCTCATT+GGG 0.387704 4:-11112700 None:intergenic
TTGTCAAGCAAATCACAAAC+TGG 0.390373 4:-11112889 None:intergenic
TGCCGAAAACCGTGATGAAT+TGG 0.391819 4:-11112671 None:intergenic
CAATTGTGTATCAAGACCTT+TGG 0.392662 4:+11113037 MsG0480018887.01.T01:CDS
GGAAAATTTCAACATTTCTC+CGG 0.396667 4:-11113272 None:intergenic
TAGTTCAAGTGACACCTATA+AGG 0.409874 4:+11113176 MsG0480018887.01.T01:CDS
ATTCGCATAAAGGATTTCAT+AGG 0.415565 4:-11112736 None:intergenic
GAATGACCTTGTCGTCGATT+GGG 0.420302 4:-11112966 None:intergenic
GAGATTGTTGGTTCATGTAA+TGG 0.423483 4:+11112991 MsG0480018887.01.T01:CDS
AGTCTTGGACTCAGTTCCTT+CGG 0.424944 4:+11113598 MsG0480018887.01.T01:CDS
TTAGATATTGTCCTTGTGGA+TGG 0.427201 4:-11113075 None:intergenic
TCGCATCTGCGTCCATGTAT+TGG 0.431402 4:-11113439 None:intergenic
AATTTGGAGTTGAAGAGTCT+TGG 0.435170 4:+11113583 MsG0480018887.01.T01:CDS
AGATTGTTGGTTCATGTAAT+GGG 0.446307 4:+11112992 MsG0480018887.01.T01:CDS
CCCATTAACACACTTATAGT+TGG 0.454836 4:-11113501 None:intergenic
ATAGTTGGTGAAACATATAC+AGG 0.465428 4:-11113486 None:intergenic
CACTACAGTGATGAGCTCAT+TGG 0.472789 4:-11112701 None:intergenic
TAGATATTGTCCTTGTGGAT+GGG 0.473826 4:-11113074 None:intergenic
CCAACTATAAGTGTGTTAAT+GGG 0.474569 4:+11113501 MsG0480018887.01.T01:CDS
CCATTGTATCTTTCAGATGA+TGG 0.479572 4:+11113716 MsG0480018887.01.T01:CDS
GTTATTATTTCACTTAATCT+GGG 0.485426 4:+11113414 MsG0480018887.01.T01:CDS
AAGGTCATTCGTGAGATTGT+TGG 0.492444 4:+11112979 MsG0480018887.01.T01:CDS
GAAAATTTCAACATTTCTCC+GGG 0.495925 4:-11113271 None:intergenic
TAGTGACAAGTGTGAGGTGA+GGG 0.513779 4:-11112840 None:intergenic
TCAGTTTGGGTGAAAATGCC+CGG 0.514993 4:+11113253 MsG0480018887.01.T01:CDS
CGAAGTTAGGATCGGTAAAG+AGG 0.518438 4:-11112786 None:intergenic
AACAGACAACACCCTTCGCC+TGG 0.519410 4:-11113329 None:intergenic
TGTTGGTTCATGTAATGGGT+TGG 0.524010 4:+11112996 MsG0480018887.01.T01:CDS
TGTATGACCTACCTCTGAAA+AGG 0.529676 4:-11113119 None:intergenic
TGACCTTGTCGTCGATTGGG+TGG 0.541991 4:-11112963 None:intergenic
AGCAAATCACAAACTGGGAC+GGG 0.544367 4:-11112883 None:intergenic
GGACGCCGACGCGACTGAGA+TGG 0.546600 4:-11112646 None:intergenic
GAAAGATACAATGGCACCAA+TGG 0.551904 4:-11113707 None:intergenic
TTAATCTGGGAACCAATACA+TGG 0.552143 4:+11113427 MsG0480018887.01.T01:CDS
AAGACTTTATACGACGCCAT+TGG 0.564231 4:+11113691 MsG0480018887.01.T01:CDS
TTACAATGTAATGACAATAG+AGG 0.564392 4:+11113221 MsG0480018887.01.T01:CDS
CAGCTATGACTACCAGGCGA+AGG 0.580523 4:+11113317 MsG0480018887.01.T01:CDS
AAGTGACACCTATAAGGTAG+TGG 0.580617 4:+11113182 MsG0480018887.01.T01:CDS
GTTGATCAGCTATGACTACC+AGG 0.589418 4:+11113311 MsG0480018887.01.T01:CDS
AAGCAAATCACAAACTGGGA+CGG 0.596119 4:-11112884 None:intergenic
AAGGGTGTTGTCTGTTTGAG+TGG 0.596987 4:+11113336 MsG0480018887.01.T01:CDS
TATTGTAATATGGCGAATGA+CGG 0.600680 4:+11113560 MsG0480018887.01.T01:CDS
GAAGTTAGGATCGGTAAAGA+GGG 0.602658 4:-11112785 None:intergenic
TCAACTGAAGCGGAACAGCA+TGG 0.609043 4:-11113293 None:intergenic
CAATTTCACGAAGTTAGGAT+CGG 0.609763 4:-11112794 None:intergenic
AGCTATGACTACCAGGCGAA+GGG 0.611453 4:+11113318 MsG0480018887.01.T01:CDS
GATGTTGATAACTAATCCGA+AGG 0.611832 4:-11113614 None:intergenic
TATCCACCCAATCGACGACA+AGG 0.620684 4:+11112960 MsG0480018887.01.T01:CDS
TCGGTAAAGAGGGAGTTACA+AGG 0.621008 4:-11112775 None:intergenic
CCATCATCTGAAAGATACAA+TGG 0.625251 4:-11113716 None:intergenic
CTAGTGACAAGTGTGAGGTG+AGG 0.628603 4:-11112841 None:intergenic
TCATAGCTGATCAACTGAAG+CGG 0.635693 4:-11113303 None:intergenic
TGTCAAGCAAATCACAAACT+GGG 0.642209 4:-11112888 None:intergenic
TATTTCTAGTGACAAGTGTG+AGG 0.645789 4:-11112846 None:intergenic
GAAAACCGTGATGAATTGGA+TGG 0.647041 4:-11112667 None:intergenic
GGCGTCCATCCAATTCATCA+CGG 0.648249 4:+11112662 MsG0480018887.01.T01:CDS
GTCTCTGATCACTCTTGACG+AGG 0.655168 4:+11112912 MsG0480018887.01.T01:CDS
TATCTCCATCTCAGTCGCGT+CGG 0.698227 4:+11112641 MsG0480018887.01.T01:CDS
CTACAGTGATGAGCTCATTG+GGG 0.702035 4:-11112699 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGACAATATCTAAAAAAAT+TGG + Chr4:11113084-11113103 MsG0480018887.01.T01:CDS 20.0%
!! ATCAAACTCATATTGTAATA+TGG + Chr4:11113550-11113569 MsG0480018887.01.T01:CDS 20.0%
!! GGACAATATCTAAAAAAATT+GGG + Chr4:11113085-11113104 MsG0480018887.01.T01:CDS 20.0%
!! GTTATTATTTCACTTAATCT+GGG + Chr4:11113414-11113433 MsG0480018887.01.T01:CDS 20.0%
!! TGTTATTATTTCACTTAATC+TGG + Chr4:11113413-11113432 MsG0480018887.01.T01:CDS 20.0%
! TTACAATGTAATGACAATAG+AGG + Chr4:11113221-11113240 MsG0480018887.01.T01:CDS 25.0%
!! ACAGGATTTTTATCAAAACT+AGG - Chr4:11113471-11113490 None:intergenic 25.0%
!!! ATACAAAGTGTTTTTGACTT+TGG + Chr4:11113659-11113678 MsG0480018887.01.T01:CDS 25.0%
!!! TTTTTTAGATATTGTCCTTG+TGG - Chr4:11113082-11113101 None:intergenic 25.0%
ACCAACTATAAGTGTGTTAA+TGG + Chr4:11113500-11113519 MsG0480018887.01.T01:CDS 30.0%
AGATCTATCAAGTTCACATT+TGG + Chr4:11113147-11113166 MsG0480018887.01.T01:CDS 30.0%
ATTCGCATAAAGGATTTCAT+AGG - Chr4:11112739-11112758 None:intergenic 30.0%
CCAACTATAAGTGTGTTAAT+GGG + Chr4:11113501-11113520 MsG0480018887.01.T01:CDS 30.0%
GAAAATTTCAACATTTCTCC+GGG - Chr4:11113274-11113293 None:intergenic 30.0%
GGAAAATTTCAACATTTCTC+CGG - Chr4:11113275-11113294 None:intergenic 30.0%
GTAGTGGCGATAAAATTTAA+TGG + Chr4:11113198-11113217 MsG0480018887.01.T01:CDS 30.0%
TATTGTAATATGGCGAATGA+CGG + Chr4:11113560-11113579 MsG0480018887.01.T01:CDS 30.0%
! AATATATTTCGCCTTTTCAG+AGG + Chr4:11113108-11113127 MsG0480018887.01.T01:CDS 30.0%
! GGATTTTTATCAAAACTAGG+AGG - Chr4:11113468-11113487 None:intergenic 30.0%
! TTCACCCAAACTGAAAATTT+TGG - Chr4:11113247-11113266 None:intergenic 30.0%
!! AGATTGTTGGTTCATGTAAT+GGG + Chr4:11112992-11113011 MsG0480018887.01.T01:CDS 30.0%
!! ATAGTTGGTGAAACATATAC+AGG - Chr4:11113489-11113508 None:intergenic 30.0%
!!! CTACAAAGTGTTTTTGACTT+TGG + Chr4:11113636-11113655 MsG0480018887.01.T01:CDS 30.0%
AAGTGCAATTTCACGAAGTT+AGG - Chr4:11112802-11112821 None:intergenic 35.0%
CAATTGTGTATCAAGACCTT+TGG + Chr4:11113037-11113056 MsG0480018887.01.T01:CDS 35.0%
CAATTTCACGAAGTTAGGAT+CGG - Chr4:11112797-11112816 None:intergenic 35.0%
CCATCATCTGAAAGATACAA+TGG - Chr4:11113719-11113738 None:intergenic 35.0%
CCATTGTATCTTTCAGATGA+TGG + Chr4:11113716-11113735 MsG0480018887.01.T01:CDS 35.0%
CCCATTAACACACTTATAGT+TGG - Chr4:11113504-11113523 None:intergenic 35.0%
TACACATCTCATTCGCATAA+AGG - Chr4:11112749-11112768 None:intergenic 35.0%
TAGATATTGTCCTTGTGGAT+GGG - Chr4:11113077-11113096 None:intergenic 35.0%
TAGTTCAAGTGACACCTATA+AGG + Chr4:11113176-11113195 MsG0480018887.01.T01:CDS 35.0%
TGTCAAGCAAATCACAAACT+GGG - Chr4:11112891-11112910 None:intergenic 35.0%
TTAATCTGGGAACCAATACA+TGG + Chr4:11113427-11113446 MsG0480018887.01.T01:CDS 35.0%
TTAGATATTGTCCTTGTGGA+TGG - Chr4:11113078-11113097 None:intergenic 35.0%
TTGTCAAGCAAATCACAAAC+TGG - Chr4:11112892-11112911 None:intergenic 35.0%
! AATTTGGAGTTGAAGAGTCT+TGG + Chr4:11113583-11113602 MsG0480018887.01.T01:CDS 35.0%
! AGAGGCCAAAATTTTCAGTT+TGG + Chr4:11113239-11113258 MsG0480018887.01.T01:CDS 35.0%
! ATCCAATTCATCACGGTTTT+CGG + Chr4:11112669-11112688 MsG0480018887.01.T01:CDS 35.0%
! GAGGCCAAAATTTTCAGTTT+GGG + Chr4:11113240-11113259 MsG0480018887.01.T01:CDS 35.0%
! GGTGGATATTTTCATGAGTA+AGG - Chr4:11112948-11112967 None:intergenic 35.0%
! GTTTGAGTGGCACTTTTAAT+TGG + Chr4:11113349-11113368 MsG0480018887.01.T01:CDS 35.0%
! TTTTATCGCCACTACCTTAT+AGG - Chr4:11113193-11113212 None:intergenic 35.0%
! TTTTCATGAGTAAGGTAGCA+TGG - Chr4:11112940-11112959 None:intergenic 35.0%
!! GAGATTGTTGGTTCATGTAA+TGG + Chr4:11112991-11113010 MsG0480018887.01.T01:CDS 35.0%
!! GATGTTGATAACTAATCCGA+AGG - Chr4:11113617-11113636 None:intergenic 35.0%
!! TATTTCTAGTGACAAGTGTG+AGG - Chr4:11112849-11112868 None:intergenic 35.0%
AAGACTTTATACGACGCCAT+TGG + Chr4:11113691-11113710 MsG0480018887.01.T01:CDS 40.0%
AAGCAAATCACAAACTGGGA+CGG - Chr4:11112887-11112906 None:intergenic 40.0%
AAGGTCATTCGTGAGATTGT+TGG + Chr4:11112979-11112998 MsG0480018887.01.T01:CDS 40.0%
AAGTGACACCTATAAGGTAG+TGG + Chr4:11113182-11113201 MsG0480018887.01.T01:CDS 40.0%
ACTACAGTGATGAGCTCATT+GGG - Chr4:11112703-11112722 None:intergenic 40.0%
ATGGCGTCGTATAAAGTCTT+TGG - Chr4:11113691-11113710 None:intergenic 40.0%
GAAAACCGTGATGAATTGGA+TGG - Chr4:11112670-11112689 None:intergenic 40.0%
GAAAGATACAATGGCACCAA+TGG - Chr4:11113710-11113729 None:intergenic 40.0%
GAAGTTAGGATCGGTAAAGA+GGG - Chr4:11112788-11112807 None:intergenic 40.0%
TCATAGCTGATCAACTGAAG+CGG - Chr4:11113306-11113325 None:intergenic 40.0%
! ATATGGCGAATGACGGAATT+TGG + Chr4:11113567-11113586 MsG0480018887.01.T01:CDS 40.0%
! TATTTCGCCTTTTCAGAGGT+AGG + Chr4:11113112-11113131 MsG0480018887.01.T01:CDS 40.0%
! TGTATGACCTACCTCTGAAA+AGG - Chr4:11113122-11113141 None:intergenic 40.0%
! TTGTGGATGGGTTCCAAAAA+TGG - Chr4:11113065-11113084 None:intergenic 40.0%
!! AAGACCTTTGGCTCCATTTT+TGG + Chr4:11113049-11113068 MsG0480018887.01.T01:CDS 40.0%
!! TGTTGGTTCATGTAATGGGT+TGG + Chr4:11112996-11113015 MsG0480018887.01.T01:CDS 40.0%
!!! ATTTTTGGAACCCATCCACA+AGG + Chr4:11113064-11113083 MsG0480018887.01.T01:CDS 40.0%
AGCAAATCACAAACTGGGAC+GGG - Chr4:11112886-11112905 None:intergenic 45.0%
AGTCTTGGACTCAGTTCCTT+CGG + Chr4:11113598-11113617 MsG0480018887.01.T01:CDS 45.0%
CACTACAGTGATGAGCTCAT+TGG - Chr4:11112704-11112723 None:intergenic 45.0%
CGAAGTTAGGATCGGTAAAG+AGG - Chr4:11112789-11112808 None:intergenic 45.0%
CTACAGTGATGAGCTCATTG+GGG - Chr4:11112702-11112721 None:intergenic 45.0%
GGTTCCAAAAATGGAGCCAA+AGG - Chr4:11113056-11113075 None:intergenic 45.0%
GTTGATCAGCTATGACTACC+AGG + Chr4:11113311-11113330 MsG0480018887.01.T01:CDS 45.0%
TAGTGACAAGTGTGAGGTGA+GGG - Chr4:11112843-11112862 None:intergenic 45.0%
TCAGTTTGGGTGAAAATGCC+CGG + Chr4:11113253-11113272 MsG0480018887.01.T01:CDS 45.0%
TCGGTAAAGAGGGAGTTACA+AGG - Chr4:11112778-11112797 None:intergenic 45.0%
TGCCGAAAACCGTGATGAAT+TGG - Chr4:11112674-11112693 None:intergenic 45.0%
! GAATGACCTTGTCGTCGATT+GGG - Chr4:11112969-11112988 None:intergenic 45.0%
!! AAGGGTGTTGTCTGTTTGAG+TGG + Chr4:11113336-11113355 MsG0480018887.01.T01:CDS 45.0%
AGCTATGACTACCAGGCGAA+GGG + Chr4:11113318-11113337 MsG0480018887.01.T01:CDS 50.0%
CGAATGACCTTGTCGTCGAT+TGG - Chr4:11112970-11112989 None:intergenic 50.0%
CTAGTGACAAGTGTGAGGTG+AGG - Chr4:11112844-11112863 None:intergenic 50.0%
GGCGTCCATCCAATTCATCA+CGG + Chr4:11112662-11112681 MsG0480018887.01.T01:CDS 50.0%
GTCTCTGATCACTCTTGACG+AGG + Chr4:11112912-11112931 MsG0480018887.01.T01:CDS 50.0%
TATCCACCCAATCGACGACA+AGG + Chr4:11112960-11112979 MsG0480018887.01.T01:CDS 50.0%
TATCTCCATCTCAGTCGCGT+CGG + Chr4:11112641-11112660 MsG0480018887.01.T01:CDS 50.0%
TCAACTGAAGCGGAACAGCA+TGG - Chr4:11113296-11113315 None:intergenic 50.0%
TCGCATCTGCGTCCATGTAT+TGG - Chr4:11113442-11113461 None:intergenic 50.0%
AACAGACAACACCCTTCGCC+TGG - Chr4:11113332-11113351 None:intergenic 55.0%
CAGCTATGACTACCAGGCGA+AGG + Chr4:11113317-11113336 MsG0480018887.01.T01:CDS 55.0%
! TGACCTTGTCGTCGATTGGG+TGG - Chr4:11112966-11112985 None:intergenic 55.0%
GGACGCCGACGCGACTGAGA+TGG - Chr4:11112649-11112668 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 11112634 11113749 11112634 ID=MsG0480018887.01;Name=MsG0480018887.01
Chr4 mRNA 11112634 11113749 11112634 ID=MsG0480018887.01.T01;Parent=MsG0480018887.01;Name=MsG0480018887.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|371
Chr4 exon 11112634 11113749 11112634 ID=MsG0480018887.01.T01:exon:7022;Parent=MsG0480018887.01.T01
Chr4 CDS 11112634 11113749 11112634 ID=MsG0480018887.01.T01:cds;Parent=MsG0480018887.01.T01
Gene Sequence

>MsG0480018887.01.T01

ATGAAGCTATCTCCATCTCAGTCGCGTCGGCGTCCATCCAATTCATCACGGTTTTCGGCATTTATCCCCAATGAGCTCATCACTGTAGTGTTTTCTCGTTTACCTATGAAATCCTTTATGCGAATGAGATGTGTAAGTAAGCCTTGTAACTCCCTCTTTACCGATCCTAACTTCGTGAAATTGCACTTTAATCAATCTGCACGAAACCCTCACCTCACACTTGTCACTAGAAATACTAAGAGTGTTATACCCGTCCCAGTTTGTGATTTGCTTGACAAGTCTCTGATCACTCTTGACGAGGATCCATGCTACCTTACTCATGAAAATATCCACCCAATCGACGACAAGGTCATTCGTGAGATTGTTGGTTCATGTAATGGGTTGGTTTGTATTCTTAGTTACTCAATTGTGTATCAAGACCTTTGGCTCCATTTTTGGAACCCATCCACAAGGACAATATCTAAAAAAATTGGGAATATATTTCGCCTTTTCAGAGGTAGGTCATACAAAGCTAGATCTATCAAGTTCACATTTGGTTATGATAGTTCAAGTGACACCTATAAGGTAGTGGCGATAAAATTTAATGGTTACAATGTAATGACAATAGAGGCCAAAATTTTCAGTTTGGGTGAAAATGCCCGGAGAAATGTTGAAATTTTCCATGCTGTTCCGCTTCAGTTGATCAGCTATGACTACCAGGCGAAGGGTGTTGTCTGTTTGAGTGGCACTTTTAATTGGTTGTCTGTTTTTGACTTCAATGTTCTTGATGTTGAGCAATATGTTATTATTTCACTTAATCTGGGAACCAATACATGGACGCAGATGCGACTACCTCCTAGTTTTGATAAAAATCCTGTATATGTTTCACCAACTATAAGTGTGTTAATGGGCTATGTATGCTTTTCTCAAAATTTTAATCAAACTCATATTGTAATATGGCGAATGACGGAATTTGGAGTTGAAGAGTCTTGGACTCAGTTCCTTCGGATTAGTTATCAACATCTACAAAGTGTTTTTGACTTTGGATACAAAGTGTTTTTGACTTTGGATATAACCAAAGACTTTATACGACGCCATTGGTGCCATTGTATCTTTCAGATGATGGTGATAGATTGA
Protein sequence

>MsG0480018887.01.T01

MKLSPSQSRRRPSNSSRFSAFIPNELITVVFSRLPMKSFMRMRCVSKPCNSLFTDPNFVKLHFNQSARNPHLTLVTRNTKSVIPVPVCDLLDKSLITLDEDPCYLTHENIHPIDDKVIREIVGSCNGLVCILSYSIVYQDLWLHFWNPSTRTISKKIGNIFRLFRGRSYKARSIKFTFGYDSSSDTYKVVAIKFNGYNVMTIEAKIFSLGENARRNVEIFHAVPLQLISYDYQAKGVVCLSGTFNWLSVFDFNVLDVEQYVIISLNLGTNTWTQMRLPPSFDKNPVYVSPTISVLMGYVCFSQNFNQTHIVIWRMTEFGVEESWTQFLRISYQHLQSVFDFGYKVFLTLDITKDFIRRHWCHCIFQMMVID*