AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043437.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043437.01.T01 MTR_7g052670 67.758 397 107 8 1 384 41 429 1.41e-162 463
MsG0880043437.01.T01 MTR_2g437110 63.566 387 107 8 1 384 42 397 2.56e-155 447
MsG0880043437.01.T01 MTR_7g035295 50.882 397 126 9 1 380 36 380 7.61e-126 368
MsG0880043437.01.T01 MTR_6g017280 51.654 393 144 9 1 380 29 388 3.47e-124 363
MsG0880043437.01.T01 MTR_7g009265 55.043 347 114 8 51 379 1 323 8.22e-119 348
MsG0880043437.01.T01 MTR_7g445890 49.242 396 137 10 1 380 36 383 9.83e-117 345
MsG0880043437.01.T01 MTR_6g017295 53.429 350 106 8 44 360 4 329 7.23e-116 348
MsG0880043437.01.T01 MTR_6g017270 47.194 392 116 9 1 380 29 341 6.95e-106 315
MsG0880043437.01.T01 MTR_6g017305 54.276 304 100 6 94 380 1 282 1.17e-103 308
MsG0880043437.01.T01 MTR_5g043160 46.190 420 155 18 1 380 70 458 1.43e-93 288
MsG0880043437.01.T01 MTR_4g129160 44.875 361 147 12 1 337 28 360 2.93e-81 253
MsG0880043437.01.T01 MTR_6g016285 38.049 410 196 10 2 383 42 421 1.22e-79 251
MsG0880043437.01.T01 MTR_7g056503 40.665 391 188 14 1 380 41 398 6.07e-77 243
MsG0880043437.01.T01 MTR_4g024890 38.987 395 183 15 2 379 31 384 9.00e-77 242
MsG0880043437.01.T01 MTR_7g055870 39.161 429 176 15 1 380 33 425 2.06e-76 243
MsG0880043437.01.T01 MTR_3g080370 39.320 412 188 12 2 383 42 421 2.74e-76 243
MsG0880043437.01.T01 MTR_1g088120 39.089 417 180 16 1 379 30 410 8.99e-76 241
MsG0880043437.01.T01 MTR_7g057270 38.346 399 195 11 1 379 46 413 1.15e-75 241
MsG0880043437.01.T01 MTR_7g055930 37.587 431 180 13 1 380 33 425 2.59e-75 240
MsG0880043437.01.T01 MTR_4g013175 38.228 429 180 15 1 378 30 424 3.03e-75 239
MsG0880043437.01.T01 MTR_7g078900 38.061 423 186 14 1 379 32 422 7.65e-75 238
MsG0880043437.01.T01 MTR_7g062100 41.266 395 174 14 1 379 44 396 8.53e-75 238
MsG0880043437.01.T01 MTR_2g043410 38.942 416 178 13 1 380 42 417 1.24e-74 238
MsG0880043437.01.T01 MTR_1g071010 40.722 388 187 12 1 380 35 387 3.48e-74 236
MsG0880043437.01.T01 MTR_4g013180 40.052 382 163 13 1 358 31 370 8.29e-74 237
MsG0880043437.01.T01 MTR_7g061090 41.750 400 176 13 1 379 42 405 1.12e-73 235
MsG0880043437.01.T01 MTR_7g056290 38.534 423 172 19 2 380 43 421 3.02e-72 232
MsG0880043437.01.T01 MTR_6g055210 36.829 410 204 11 1 383 42 423 8.30e-72 231
MsG0880043437.01.T01 MTR_0128s0010 40.506 395 183 14 1 380 41 398 9.06e-72 230
MsG0880043437.01.T01 MTR_7g061060 40.160 376 167 13 1 359 33 367 2.37e-71 229
MsG0880043437.01.T01 MTR_4g030830 37.531 405 187 16 2 380 30 394 2.42e-71 229
MsG0880043437.01.T01 MTR_0128s0020 37.306 386 203 6 1 378 38 392 2.84e-71 228
MsG0880043437.01.T01 MTR_7g056003 39.518 415 173 18 2 380 36 408 3.22e-71 229
MsG0880043437.01.T01 MTR_5g056020 40.247 405 195 13 2 380 38 421 3.29e-71 231
MsG0880043437.01.T01 MTR_4g129190 38.386 409 177 15 1 379 26 389 4.54e-71 228
MsG0880043437.01.T01 MTR_1g442850 38.325 394 185 11 1 379 25 375 5.67e-71 227
MsG0880043437.01.T01 MTR_7g061050 38.693 398 178 15 1 379 33 383 7.02e-71 227
MsG0880043437.01.T01 MTR_2g010950 38.481 395 197 12 1 379 40 404 7.87e-71 228
MsG0880043437.01.T01 MTR_0707s0020 36.534 427 200 16 2 383 47 447 8.33e-71 229
MsG0880043437.01.T01 MTR_2g043400 38.038 418 179 14 1 380 43 418 1.31e-70 228
MsG0880043437.01.T01 MTR_7g055987 41.813 342 143 12 2 334 41 335 1.66e-70 226
MsG0880043437.01.T01 MTR_4g013185 37.413 433 180 15 1 379 30 425 2.18e-70 227
MsG0880043437.01.T01 MTR_7g079160 37.592 407 179 15 1 362 28 404 2.22e-70 229
MsG0880043437.01.T01 MTR_5g069760 38.303 389 185 17 1 379 26 369 2.37e-70 225
MsG0880043437.01.T01 MTR_7g060940 38.596 399 176 12 1 378 42 392 3.13e-70 226
MsG0880043437.01.T01 MTR_0242s0060 36.170 423 190 14 1 378 29 416 5.35e-69 223
MsG0880043437.01.T01 MTR_0242s0040 36.170 423 190 14 1 378 29 416 5.35e-69 223
MsG0880043437.01.T01 MTR_0128s0070 36.104 385 208 6 1 378 42 395 7.34e-69 222
MsG0880043437.01.T01 MTR_7g056390 37.619 420 178 17 2 379 39 416 2.25e-68 221
MsG0880043437.01.T01 MTR_7g091630 38.313 415 190 14 1 382 52 433 3.43e-68 221
MsG0880043437.01.T01 MTR_4g033495 37.656 401 187 13 1 380 47 405 4.27e-68 221
MsG0880043437.01.T01 MTR_7g077970 36.471 425 194 13 1 379 27 421 6.49e-68 221
MsG0880043437.01.T01 MTR_3g464470 37.940 398 183 15 2 380 28 380 8.23e-68 219
MsG0880043437.01.T01 MTR_7g050480 37.250 400 176 15 1 378 42 388 1.34e-67 219
MsG0880043437.01.T01 MTR_7g078040 34.954 432 200 13 1 379 29 432 1.36e-67 220
MsG0880043437.01.T01 MTR_8g066440 38.422 393 194 13 1 379 43 401 1.55e-67 219
MsG0880043437.01.T01 MTR_7g060960 39.691 388 149 12 2 378 53 366 2.92e-67 217
MsG0880043437.01.T01 MTR_7g062060 37.624 404 191 14 1 379 32 399 3.70e-67 218
MsG0880043437.01.T01 MTR_7g066100 37.468 395 201 14 1 380 31 394 4.11e-67 218
MsG0880043437.01.T01 MTR_4g019990 37.284 405 186 17 2 380 27 389 4.65e-67 217
MsG0880043437.01.T01 MTR_7g066030 36.881 404 190 13 1 380 41 403 9.11e-67 217
MsG0880043437.01.T01 MTR_3g072470 37.767 421 178 17 2 380 40 418 1.56e-66 217
MsG0880043437.01.T01 MTR_1g112010 38.903 383 170 16 3 380 2 325 1.82e-66 214
MsG0880043437.01.T01 MTR_4g030090 35.732 403 198 15 2 380 35 400 2.22e-66 216
MsG0880043437.01.T01 MTR_7g078840 35.597 427 202 14 1 379 30 431 3.65e-66 216
MsG0880043437.01.T01 MTR_7g050520 38.000 400 173 16 1 378 42 388 3.96e-66 215
MsG0880043437.01.T01 MTR_7g055977 37.500 400 181 14 2 379 28 380 5.14e-66 214
MsG0880043437.01.T01 MTR_7g028660 38.961 385 192 16 1 379 31 378 8.31e-66 214
MsG0880043437.01.T01 MTR_6g086920 34.921 441 202 17 2 383 59 473 1.26e-65 216
MsG0880043437.01.T01 MTR_7g078860 38.817 389 166 17 1 358 29 376 2.80e-65 213
MsG0880043437.01.T01 MTR_7g066850 37.010 408 184 16 2 381 44 406 4.99e-65 214
MsG0880043437.01.T01 MTR_0097s0030 37.469 403 181 17 1 380 34 388 5.37e-65 212
MsG0880043437.01.T01 MTR_2g047240 37.469 403 181 17 1 380 34 388 5.37e-65 212
MsG0880043437.01.T01 MTR_4g031020 36.941 425 190 16 2 380 36 428 9.35e-65 213
MsG0880043437.01.T01 MTR_4g030980 36.706 425 193 17 1 380 35 428 9.35e-65 213
MsG0880043437.01.T01 MTR_7g022600 36.957 414 193 16 1 380 43 422 3.35e-64 211
MsG0880043437.01.T01 MTR_5g069930 35.115 393 195 15 1 377 26 374 3.69e-64 209
MsG0880043437.01.T01 MTR_2g047892 39.552 402 175 19 1 380 42 397 3.79e-64 210
MsG0880043437.01.T01 MTR_4g034860 37.008 381 174 17 8 359 49 392 4.58e-64 210
MsG0880043437.01.T01 MTR_6g092560 35.484 403 205 11 1 383 32 399 4.65e-64 211
MsG0880043437.01.T01 MTR_7g070830 37.136 412 192 18 2 379 42 420 6.38e-64 210
MsG0880043437.01.T01 MTR_4g008790 35.539 408 164 11 1 360 59 415 6.51e-64 211
MsG0880043437.01.T01 MTR_3g464500 36.591 399 190 13 2 380 48 403 9.45e-64 209
MsG0880043437.01.T01 MTR_0464s0020 38.028 426 177 18 2 380 44 429 1.01e-63 210
MsG0880043437.01.T01 MTR_7g066000 37.532 389 200 14 1 378 45 401 1.07e-63 209
MsG0880043437.01.T01 MTR_7g056760 37.275 389 209 14 1 380 43 405 1.17e-63 209
MsG0880043437.01.T01 MTR_5g096710 38.168 393 194 12 1 380 43 399 4.73e-63 207
MsG0880043437.01.T01 MTR_0649s0020 36.842 399 192 12 1 380 31 388 1.39e-62 206
MsG0880043437.01.T01 MTR_7g052150 37.469 403 181 16 1 378 42 398 1.39e-62 206
MsG0880043437.01.T01 MTR_3g437520 38.308 402 167 16 2 361 44 406 1.39e-61 205
MsG0880043437.01.T01 MTR_2g047200 37.093 399 188 17 1 380 40 394 1.64e-61 203
MsG0880043437.01.T01 MTR_7g066840 37.343 399 188 17 2 381 44 399 1.68e-61 203
MsG0880043437.01.T01 MTR_7g070880 36.893 412 193 18 2 379 42 420 4.08e-61 203
MsG0880043437.01.T01 MTR_3g013470 34.146 410 182 13 1 374 15 372 7.59e-61 201
MsG0880043437.01.T01 MTR_2g010920 34.856 416 203 15 1 379 40 424 3.10e-60 201
MsG0880043437.01.T01 MTR_5g068040 36.776 397 179 13 1 378 36 379 4.33e-60 199
MsG0880043437.01.T01 MTR_7g056797 36.317 391 208 14 1 380 43 403 5.27e-60 199
MsG0880043437.01.T01 MTR_7g056710 37.084 391 184 17 1 378 38 379 6.55e-60 199
MsG0880043437.01.T01 MTR_4g011660 36.562 413 196 19 1 380 39 418 1.46e-59 199
MsG0880043437.01.T01 MTR_2g010900 36.464 362 180 13 1 343 3 333 4.05e-59 196
MsG0880043437.01.T01 MTR_7g055830 40.063 317 127 9 101 380 67 357 9.39e-59 195
MsG0880043437.01.T01 MTR_7g056737 37.903 372 172 15 2 359 43 369 2.76e-58 195
MsG0880043437.01.T01 MTR_7g056717 36.641 393 186 16 1 379 42 385 3.21e-58 194
MsG0880043437.01.T01 MTR_7g077910 39.835 364 154 14 48 379 5 335 4.81e-58 192
MsG0880043437.01.T01 MTR_7g113500 38.720 328 158 10 70 379 79 381 1.05e-57 193
MsG0880043437.01.T01 MTR_7g077070 34.524 420 206 18 2 379 37 429 1.23e-57 194
MsG0880043437.01.T01 MTR_1g029650 35.593 413 191 19 2 378 29 402 1.54e-57 193
MsG0880043437.01.T01 MTR_7g056170 36.259 433 158 16 1 381 95 461 2.66e-57 194
MsG0880043437.01.T01 MTR_6g088385 40.278 288 134 8 111 383 58 322 3.52e-57 189
MsG0880043437.01.T01 MTR_7g056570 36.548 394 188 15 2 381 39 384 5.65e-57 192
MsG0880043437.01.T01 MTR_4g030110 36.990 392 159 15 2 365 51 382 7.93e-57 191
MsG0880043437.01.T01 MTR_2g047878 36.126 382 184 11 1 380 41 364 2.07e-56 189
MsG0880043437.01.T01 MTR_7g066010 36.090 399 165 16 2 380 42 370 4.23e-56 188
MsG0880043437.01.T01 MTR_6g065510 40.702 285 122 8 111 379 77 330 5.24e-56 187
MsG0880043437.01.T01 MTR_7g091640 39.939 328 152 13 1 317 55 348 7.09e-56 188
MsG0880043437.01.T01 MTR_7g056200 36.250 400 173 16 2 380 44 382 2.34e-55 187
MsG0880043437.01.T01 MTR_7g055953 42.471 259 103 7 136 379 87 314 8.13e-55 183
MsG0880043437.01.T01 MTR_7g061010 36.735 392 185 14 2 378 43 386 2.72e-53 181
MsG0880043437.01.T01 MTR_7g066060 34.165 401 207 14 1 380 43 407 7.31e-53 183
MsG0880043437.01.T01 MTR_2g006360 35.917 387 148 13 1 378 66 361 2.13e-52 178
MsG0880043437.01.T01 MTR_2g461450 34.667 375 176 16 2 363 39 357 3.79e-52 177
MsG0880043437.01.T01 MTR_0267s0050 31.818 396 211 15 2 378 27 382 9.95e-52 177
MsG0880043437.01.T01 MTR_7g077990 33.750 400 195 14 1 376 37 390 2.63e-51 176
MsG0880043437.01.T01 MTR_7g022670 31.980 394 169 10 1 380 43 351 6.53e-51 174
MsG0880043437.01.T01 MTR_7g030040 38.170 317 99 10 73 384 116 340 7.14e-51 174
MsG0880043437.01.T01 MTR_1g015730 33.967 421 179 14 1 378 29 393 1.47e-50 174
MsG0880043437.01.T01 MTR_7g056173 41.729 266 104 7 138 378 26 265 2.02e-50 172
MsG0880043437.01.T01 MTR_8g101940 36.207 406 172 19 2 380 23 368 5.35e-50 172
MsG0880043437.01.T01 MTR_7g056260 38.532 327 144 14 1 313 34 317 6.01e-50 171
MsG0880043437.01.T01 MTR_4g030760 33.418 395 190 18 2 380 94 431 3.55e-48 169
MsG0880043437.01.T01 MTR_5g058620 36.577 298 133 10 113 380 11 282 1.09e-47 164
MsG0880043437.01.T01 MTR_1g058870 36.577 298 133 10 113 380 11 282 1.09e-47 164
MsG0880043437.01.T01 MTR_3g013950 30.500 400 213 16 2 378 27 384 1.34e-47 166
MsG0880043437.01.T01 MTR_7g034310 42.570 249 99 9 138 379 16 227 5.36e-47 160
MsG0880043437.01.T01 MTR_7g056820 32.152 395 197 18 4 378 30 373 6.97e-47 164
MsG0880043437.01.T01 MTR_7g066080 31.773 406 225 12 1 380 36 415 2.60e-46 164
MsG0880043437.01.T01 MTR_2g047895 36.478 318 148 12 73 374 26 305 5.89e-45 158
MsG0880043437.01.T01 MTR_7g070440 33.246 382 211 16 2 378 28 370 1.38e-43 155
MsG0880043437.01.T01 MTR_6g081280 38.372 258 109 7 138 379 17 240 7.12e-43 150
MsG0880043437.01.T01 MTR_4g030790 34.954 329 131 14 2 322 40 293 1.22e-42 152
MsG0880043437.01.T01 MTR_1g015740 30.457 394 162 12 1 378 28 325 3.37e-42 150
MsG0880043437.01.T01 MTR_7g091610 44.086 186 82 3 213 382 70 249 3.62e-42 148
MsG0880043437.01.T01 MTR_7g445750 34.700 317 164 10 1 302 43 331 9.97e-42 149
MsG0880043437.01.T01 MTR_2g010935 37.849 251 111 7 137 379 36 249 1.49e-41 147
MsG0880043437.01.T01 MTR_2g021150 30.628 382 215 15 1 379 34 368 3.59e-41 149
MsG0880043437.01.T01 MTR_4g037465 30.693 404 196 19 4 378 44 392 4.54e-41 149
MsG0880043437.01.T01 MTR_7g061940 39.631 217 97 4 140 350 78 266 3.32e-40 144
MsG0880043437.01.T01 MTR_1g047490 34.985 323 124 14 1 304 42 297 6.77e-40 144
MsG0880043437.01.T01 MTR_7g037670 30.446 381 172 11 1 379 43 332 6.84e-38 139
MsG0880043437.01.T01 MTR_4g006350 33.439 314 155 12 84 378 595 873 1.07e-36 142
MsG0880043437.01.T01 MTR_7g058630 42.941 170 82 4 220 380 17 180 3.46e-36 130
MsG0880043437.01.T01 MTR_7g078940 32.009 428 160 21 3 379 54 401 5.86e-36 135
MsG0880043437.01.T01 MTR_7g078960 32.602 319 152 12 91 379 1 286 7.96e-36 132
MsG0880043437.01.T01 MTR_4g020000 38.189 254 123 10 138 379 112 343 1.02e-35 134
MsG0880043437.01.T01 MTR_5g011350 37.638 271 108 13 38 292 21 246 2.50e-35 130
MsG0880043437.01.T01 MTR_2g017720 40.758 211 97 8 177 375 102 296 8.06e-35 133
MsG0880043437.01.T01 MTR_8g030630 39.378 193 83 5 171 357 276 440 1.57e-34 132
MsG0880043437.01.T01 MTR_8g030630 38.798 183 87 6 198 365 73 245 1.97e-30 121
MsG0880043437.01.T01 MTR_1g097560 29.794 339 172 13 2 337 57 332 2.76e-34 130
MsG0880043437.01.T01 MTR_5g069950 36.364 209 90 5 111 319 38 203 6.66e-33 123
MsG0880043437.01.T01 MTR_4g128320 32.103 271 126 7 103 362 38 261 2.86e-32 123
MsG0880043437.01.T01 MTR_3g009240 29.945 364 194 16 1 357 56 365 9.27e-32 124
MsG0880043437.01.T01 MTR_3g083640 29.058 382 214 15 1 379 75 402 9.64e-32 124
MsG0880043437.01.T01 MTR_2g060555 36.531 271 119 13 108 367 47 275 1.43e-31 121
MsG0880043437.01.T01 MTR_3g007330 30.691 391 199 20 1 382 68 395 1.81e-31 123
MsG0880043437.01.T01 MTR_6g042600 45.161 155 70 4 230 375 172 320 1.72e-30 120
MsG0880043437.01.T01 MTR_6g042600 32.680 153 63 5 2 153 57 170 1.88e-12 68.6
MsG0880043437.01.T01 MTR_3g055000 44.604 139 64 4 241 379 1 126 2.52e-30 113
MsG0880043437.01.T01 MTR_4g024870 34.586 266 125 13 2 251 65 297 5.18e-30 120
MsG0880043437.01.T01 MTR_7g078880 34.894 235 88 7 177 376 107 311 6.57e-30 119
MsG0880043437.01.T01 MTR_7g056023 33.205 259 115 10 52 294 61 277 9.05e-30 116
MsG0880043437.01.T01 MTR_0128s0110 33.173 208 108 8 188 378 9 202 1.11e-29 114
MsG0880043437.01.T01 MTR_0354s0030 58.333 96 29 2 296 380 1 96 1.77e-29 110
MsG0880043437.01.T01 MTR_2g029990 29.487 390 206 19 1 379 71 402 2.00e-29 118
MsG0880043437.01.T01 MTR_3g014540 32.391 389 193 22 1 379 49 377 2.06e-29 117
MsG0880043437.01.T01 MTR_7g006360 43.506 154 77 5 234 382 130 278 3.07e-29 115
MsG0880043437.01.T01 MTR_4g061340 29.016 386 211 17 1 379 46 375 4.92e-29 116
MsG0880043437.01.T01 MTR_1g097490 27.887 355 200 14 2 356 70 368 5.23e-29 116
MsG0880043437.01.T01 MTR_5g022420 28.499 393 203 16 2 379 48 377 5.84e-29 116
MsG0880043437.01.T01 MTR_4g031770 28.571 399 211 19 1 379 24 368 5.97e-29 116
MsG0880043437.01.T01 MTR_2g027820 39.674 184 84 5 213 378 125 299 1.31e-28 114
MsG0880043437.01.T01 MTR_2g021190 29.124 388 210 18 1 379 41 372 2.01e-28 114
MsG0880043437.01.T01 MTR_3g006570 26.598 391 220 16 1 379 41 376 3.40e-28 114
MsG0880043437.01.T01 MTR_8g101580 27.273 396 208 18 2 382 67 397 4.97e-28 114
MsG0880043437.01.T01 MTR_2g046900 27.604 384 230 16 2 382 49 387 5.19e-28 114
MsG0880043437.01.T01 MTR_1g094210 27.720 386 212 17 2 382 78 401 6.26e-28 114
MsG0880043437.01.T01 MTR_1g094210 28.783 337 176 15 2 333 78 355 8.48e-28 113
MsG0880043437.01.T01 MTR_7g407070 31.595 326 170 18 2 313 53 339 1.04e-27 113
MsG0880043437.01.T01 MTR_1g097330 27.348 362 208 16 2 360 37 346 2.28e-27 112
MsG0880043437.01.T01 MTR_3g036290 30.818 318 149 13 1 312 42 294 2.31e-27 111
MsG0880043437.01.T01 MTR_3g007410 30.203 394 197 22 1 379 72 402 2.53e-27 112
MsG0880043437.01.T01 MTR_2g046920 26.302 384 227 14 2 382 45 375 3.01e-27 111
MsG0880043437.01.T01 MTR_3g007360 29.545 396 197 22 1 379 72 402 3.37e-27 111
MsG0880043437.01.T01 MTR_6g007135 28.093 388 226 17 1 379 46 389 4.38e-27 111
MsG0880043437.01.T01 MTR_3g013740 29.049 389 220 18 1 379 64 406 6.69e-27 111
MsG0880043437.01.T01 MTR_3g010390 28.608 395 216 22 1 379 53 397 6.76e-27 110
MsG0880043437.01.T01 MTR_1g054725 29.676 401 193 26 2 379 41 375 7.85e-27 110
MsG0880043437.01.T01 MTR_1g050542 27.792 385 214 17 1 379 78 404 1.13e-26 110
MsG0880043437.01.T01 MTR_8g467140 30.696 316 161 15 2 311 53 316 1.23e-26 108
MsG0880043437.01.T01 MTR_3g030350 29.306 389 212 18 1 379 55 390 1.26e-26 110
MsG0880043437.01.T01 MTR_6g004660 29.897 388 220 19 1 379 36 380 1.34e-26 109
MsG0880043437.01.T01 MTR_2g021155 27.200 375 219 14 1 372 56 379 1.56e-26 112
MsG0880043437.01.T01 MTR_2g021155 27.018 285 162 15 111 379 701 955 8.64e-12 67.4
MsG0880043437.01.T01 MTR_7g066040 35.885 209 100 9 62 253 6 197 3.74e-26 105
MsG0880043437.01.T01 MTR_2g021252 29.949 394 183 21 2 379 68 384 6.95e-26 107
MsG0880043437.01.T01 MTR_5g046300 26.804 388 214 17 1 379 24 350 8.65e-26 107
MsG0880043437.01.T01 MTR_5g046290 26.804 388 214 17 1 379 24 350 8.65e-26 107
MsG0880043437.01.T01 MTR_3g014570 29.351 385 211 17 1 379 49 378 9.11e-26 107
MsG0880043437.01.T01 MTR_1g054575 28.107 338 182 15 1 332 72 354 1.14e-25 109
MsG0880043437.01.T01 MTR_3g024040 28.424 387 210 20 1 382 51 375 1.36e-25 107
MsG0880043437.01.T01 MTR_2g046800 27.941 408 216 21 1 379 34 392 1.65e-25 107
MsG0880043437.01.T01 MTR_7g061100 32.342 269 102 10 1 260 33 230 1.90e-25 105
MsG0880043437.01.T01 MTR_3g013770 29.315 365 205 16 2 359 54 372 1.92e-25 106
MsG0880043437.01.T01 MTR_8g062660 28.994 338 161 14 1 317 42 321 4.55e-25 107
MsG0880043437.01.T01 MTR_3g011060 28.158 380 200 18 1 366 48 368 6.94e-25 105
MsG0880043437.01.T01 MTR_3g009310 28.052 385 213 16 2 379 63 390 6.99e-25 105
MsG0880043437.01.T01 MTR_3g006670 28.841 371 192 19 1 362 69 376 7.52e-25 105
MsG0880043437.01.T01 MTR_6g048150 52.688 93 35 2 293 376 13 105 9.31e-25 98.6
MsG0880043437.01.T01 MTR_3g006530 26.302 384 231 15 1 379 60 396 1.62e-24 104
MsG0880043437.01.T01 MTR_3g007270 28.173 323 180 14 1 314 67 346 3.04e-24 103
MsG0880043437.01.T01 MTR_3g036430 25.521 384 198 14 2 379 41 342 3.64e-24 102
MsG0880043437.01.T01 MTR_3g436150 29.909 331 163 18 2 313 53 333 4.14e-24 102
MsG0880043437.01.T01 MTR_0044s0300 25.840 387 224 16 1 379 58 389 4.50e-24 102
MsG0880043437.01.T01 MTR_3g011020 28.756 386 203 18 1 378 48 369 5.59e-24 102
MsG0880043437.01.T01 MTR_4g024910 47.273 110 51 2 275 377 154 263 5.69e-24 101
MsG0880043437.01.T01 MTR_4g024910 37.195 164 83 6 2 163 4 149 5.16e-21 93.2
MsG0880043437.01.T01 MTR_7g056793 27.586 290 145 8 91 378 4 230 6.26e-24 99.4
MsG0880043437.01.T01 MTR_1g055375 26.598 391 223 16 3 379 26 366 8.89e-24 101
MsG0880043437.01.T01 MTR_3g010520 26.992 389 200 15 1 379 45 359 1.17e-23 101
MsG0880043437.01.T01 MTR_4g108820 27.907 344 144 16 2 334 63 313 2.36e-23 99.8
MsG0880043437.01.T01 MTR_4g107780 25.935 401 212 19 2 384 57 390 2.65e-23 100
MsG0880043437.01.T01 MTR_4g107820 25.935 401 212 19 2 384 57 390 2.70e-23 100
MsG0880043437.01.T01 MTR_4g107820 26.010 396 208 19 2 379 57 385 3.38e-23 100
MsG0880043437.01.T01 MTR_4g107780 26.010 396 208 19 2 379 57 385 3.38e-23 100
MsG0880043437.01.T01 MTR_3g010590 26.718 393 208 17 1 379 59 385 3.64e-23 100
MsG0880043437.01.T01 MTR_3g011100 29.483 329 164 16 1 315 255 529 4.31e-23 101
MsG0880043437.01.T01 MTR_5g007610 27.411 394 217 17 1 379 61 400 4.88e-23 100
MsG0880043437.01.T01 MTR_1g115160 26.615 387 214 17 1 379 42 366 5.25e-23 99.4
MsG0880043437.01.T01 MTR_3g010430 26.142 394 219 20 1 379 56 392 6.29e-23 99.8
MsG0880043437.01.T01 MTR_3g024150 27.389 314 173 11 1 311 55 316 9.05e-23 99.0
MsG0880043437.01.T01 MTR_7g050490 37.438 203 77 8 1 195 28 188 9.53e-23 94.7
MsG0880043437.01.T01 MTR_6g053240 26.329 395 232 19 1 381 48 397 1.77e-22 98.6
MsG0880043437.01.T01 MTR_3g024130 29.967 307 156 17 83 379 57 314 1.81e-22 97.1
MsG0880043437.01.T01 MTR_6g053260 26.420 405 214 20 1 381 357 701 2.15e-22 99.8
MsG0880043437.01.T01 MTR_7g445580 45.045 111 54 2 250 359 42 146 2.52e-22 92.4
MsG0880043437.01.T01 MTR_7g089830 37.086 151 59 4 214 348 8 138 2.68e-22 92.4
MsG0880043437.01.T01 MTR_2g028160 25.779 353 221 14 2 343 26 348 4.30e-22 97.4
MsG0880043437.01.T01 MTR_3g036335 26.020 392 219 18 1 379 61 394 4.64e-22 97.1
MsG0880043437.01.T01 MTR_2g078850 29.781 319 169 12 1 315 50 317 5.17e-22 96.7
MsG0880043437.01.T01 MTR_2g078900 30.530 321 161 18 1 315 53 317 5.85e-22 96.3
MsG0880043437.01.T01 MTR_0760s0010 27.249 389 211 18 2 382 68 392 9.82e-22 96.3
MsG0880043437.01.T01 MTR_7g062070 42.975 121 59 3 244 358 75 191 1.04e-21 92.4
MsG0880043437.01.T01 MTR_7g070900 31.765 255 85 10 138 375 236 418 1.28e-21 96.7
MsG0880043437.01.T01 MTR_2g047832 25.876 371 204 14 2 350 50 371 1.68e-21 95.9
MsG0880043437.01.T01 MTR_2g028130 23.747 379 241 14 2 365 26 371 1.75e-21 95.5
MsG0880043437.01.T01 MTR_3g030310 27.792 403 214 19 1 379 41 390 1.94e-21 95.1
MsG0880043437.01.T01 MTR_5g011200 24.433 397 219 15 2 378 38 373 2.50e-21 94.7
MsG0880043437.01.T01 MTR_3g030330 26.343 391 217 16 1 379 40 371 2.97e-21 94.4
MsG0880043437.01.T01 MTR_4g055060 29.909 331 163 17 1 317 50 325 3.55e-21 94.4
MsG0880043437.01.T01 MTR_3g009300 30.263 304 160 15 85 382 98 355 4.07e-21 94.0
MsG0880043437.01.T01 MTR_3g024110 26.598 391 211 17 1 379 121 447 6.06e-21 94.4
MsG0880043437.01.T01 MTR_3g009260 28.804 368 190 17 1 357 61 367 7.86e-21 93.6
MsG0880043437.01.T01 MTR_7g007300 25.654 382 220 13 2 379 124 445 8.96e-21 94.0
MsG0880043437.01.T01 MTR_3g007430 27.676 383 214 17 1 379 63 386 1.45e-20 92.8
MsG0880043437.01.T01 MTR_3g030240 25.130 386 214 16 1 379 60 377 1.90e-20 92.4
MsG0880043437.01.T01 MTR_5g057790 27.711 332 158 16 1 314 66 333 2.85e-20 92.0
MsG0880043437.01.T01 MTR_1g115185 28.389 391 218 19 1 379 59 399 4.20e-20 91.7
MsG0880043437.01.T01 MTR_5g046260 23.896 385 176 15 1 379 24 297 4.55e-20 90.1
MsG0880043437.01.T01 MTR_5g057690 28.438 320 159 17 2 314 67 323 5.14e-20 91.3
MsG0880043437.01.T01 MTR_6g007150 27.778 342 187 18 53 379 41 337 7.84e-20 90.1
MsG0880043437.01.T01 MTR_5g057710 28.267 329 160 16 1 314 66 333 9.23e-20 90.5
MsG0880043437.01.T01 MTR_2g046830 26.488 336 193 14 2 332 46 332 9.31e-20 90.5
MsG0880043437.01.T01 MTR_6g027910 28.465 404 204 23 2 379 30 374 9.60e-20 90.1
MsG0880043437.01.T01 MTR_3g030320 28.144 334 187 15 52 379 12 298 1.01e-19 89.0
MsG0880043437.01.T01 MTR_7g038710 57.576 66 27 1 319 384 87 151 1.80e-19 84.7
MsG0880043437.01.T01 MTR_3g030250 26.684 386 213 19 1 379 57 379 2.07e-19 89.4
MsG0880043437.01.T01 MTR_3g007300 29.814 322 143 16 2 321 70 310 2.85e-19 88.6
MsG0880043437.01.T01 MTR_6g021880 25.455 385 238 17 1 379 40 381 3.68e-19 88.6
MsG0880043437.01.T01 MTR_3g055070 42.609 115 52 5 241 355 1 101 3.71e-19 84.0
MsG0880043437.01.T01 MTR_3g023930 26.302 384 208 17 1 379 54 367 4.45e-19 88.2
MsG0880043437.01.T01 MTR_3g010920 25.641 390 207 17 1 379 64 381 5.43e-19 88.2
MsG0880043437.01.T01 MTR_7g070937 37.838 148 67 5 134 269 6 140 5.55e-19 84.0
MsG0880043437.01.T01 MTR_1g055070 25.575 391 210 18 2 379 70 392 6.09e-19 88.2
MsG0880043437.01.T01 MTR_2g046860 27.481 262 153 11 84 342 7 234 6.51e-19 87.0
MsG0880043437.01.T01 MTR_0667s0010 24.233 326 209 13 69 382 80 379 6.57e-19 88.2
MsG0880043437.01.T01 MTR_6g013270 25.562 356 187 16 1 338 49 344 8.32e-19 87.8
MsG0880043437.01.T01 MTR_4g023090 26.396 394 220 16 2 379 37 376 8.41e-19 87.4
MsG0880043437.01.T01 MTR_1g068835 23.779 307 193 13 84 384 89 360 9.86e-19 87.4
MsG0880043437.01.T01 MTR_3g010970 26.972 393 204 18 1 379 68 391 1.46e-18 87.0
MsG0880043437.01.T01 MTR_4g023120 26.286 350 195 13 1 336 23 323 2.38e-18 85.9
MsG0880043437.01.T01 MTR_3g010870 25.648 386 222 15 1 379 57 384 2.74e-18 85.9
MsG0880043437.01.T01 MTR_7g021580 53.488 86 33 3 298 379 218 300 3.01e-18 84.7
MsG0880043437.01.T01 MTR_7g021580 25.758 264 131 10 1 260 53 255 1.94e-12 67.8
MsG0880043437.01.T01 MTR_4g023080 27.193 342 180 15 1 336 29 307 3.04e-18 85.5
MsG0880043437.01.T01 MTR_7g055850 34.555 191 86 9 2 165 34 212 6.16e-18 83.6
MsG0880043437.01.T01 MTR_3g010620 24.505 404 213 14 1 379 56 392 7.98e-18 84.7
MsG0880043437.01.T01 MTR_3g034130 27.566 341 198 15 2 336 30 327 8.34e-18 84.3
MsG0880043437.01.T01 MTR_4g021785 25.723 346 179 15 2 336 30 308 1.04e-17 84.0
MsG0880043437.01.T01 MTR_2g021210 25.587 383 217 15 2 379 105 424 1.10e-17 84.7
MsG0880043437.01.T01 MTR_3g083010 24.020 408 245 19 2 382 27 396 1.14e-17 84.3
MsG0880043437.01.T01 MTR_2g025420 24.684 316 197 13 84 382 104 395 1.14e-17 84.3
MsG0880043437.01.T01 MTR_7g066830 33.663 202 95 7 1 199 15 180 1.24e-17 80.5
MsG0880043437.01.T01 MTR_7g058660 41.441 111 53 2 277 375 100 210 1.49e-17 81.3
MsG0880043437.01.T01 MTR_3g058470 26.146 371 184 17 1 358 57 350 1.95e-17 83.6
MsG0880043437.01.T01 MTR_2g021050 21.337 389 245 12 2 382 26 361 2.05e-17 83.6
MsG0880043437.01.T01 MTR_2g426060 22.980 396 247 16 2 382 27 379 4.10e-17 82.8
MsG0880043437.01.T01 MTR_6g048140 25.481 416 207 21 1 382 59 405 6.62e-17 82.0
MsG0880043437.01.T01 MTR_4g023070 25.779 353 193 14 1 336 23 323 8.42e-17 81.6
MsG0880043437.01.T01 MTR_3g006500 25.381 394 218 19 1 379 37 369 8.96e-17 81.3
MsG0880043437.01.T01 MTR_1g016960 43.689 103 46 2 288 378 152 254 1.04e-16 79.7
MsG0880043437.01.T01 MTR_3g034180 26.316 342 201 16 2 336 144 441 1.09e-16 82.0
MsG0880043437.01.T01 MTR_3g058440 28.409 264 151 12 1 261 55 283 1.10e-16 80.5
MsG0880043437.01.T01 MTR_2g426020 24.601 313 191 10 84 382 98 379 1.16e-16 81.3
MsG0880043437.01.T01 MTR_3g103020 26.425 386 220 17 2 379 41 370 1.48e-16 80.9
MsG0880043437.01.T01 MTR_6g048120 27.901 405 219 21 1 382 56 410 1.73e-16 80.9
MsG0880043437.01.T01 MTR_2g425980 22.762 391 255 14 2 382 26 379 1.98e-16 80.9
MsG0880043437.01.T01 MTR_2g078870 26.087 299 170 12 85 379 56 307 3.13e-16 79.0
MsG0880043437.01.T01 MTR_5g046280 24.834 302 167 13 87 379 3 253 5.71e-16 77.4
MsG0880043437.01.T01 MTR_4g053470 27.248 367 153 19 1 350 42 311 7.33e-16 78.2
MsG0880043437.01.T01 MTR_1g112930 24.872 390 229 17 1 382 45 378 7.83e-16 78.6
MsG0880043437.01.T01 MTR_4g133170 22.126 348 207 13 1 339 24 316 9.87e-16 78.6
MsG0880043437.01.T01 MTR_1004s0010 25.914 301 161 12 87 382 119 362 1.14e-15 78.2
MsG0880043437.01.T01 MTR_3g058480 28.261 276 138 12 1 261 59 289 1.14e-15 77.8
MsG0880043437.01.T01 MTR_2g426090 21.294 371 242 12 2 361 27 358 1.51e-15 78.2
MsG0880043437.01.T01 MTR_2g026010 23.181 371 229 13 2 365 25 346 1.77e-15 77.8
MsG0880043437.01.T01 MTR_5g010550 25.581 344 182 16 2 306 79 387 2.33e-15 77.8
MsG0880043437.01.T01 MTR_8g073550 31.553 206 93 11 2 198 51 217 2.39e-15 75.1
MsG0880043437.01.T01 MTR_5g027330 22.981 322 190 13 2 307 61 340 2.40e-15 77.8
MsG0880043437.01.T01 MTR_5g010550 25.581 344 182 16 2 306 65 373 2.58e-15 77.8
MsG0880043437.01.T01 MTR_4g109270 26.425 386 220 19 1 379 28 356 2.98e-15 76.6
MsG0880043437.01.T01 MTR_5g010560 26.211 351 169 17 2 306 65 371 8.37e-15 76.3
MsG0880043437.01.T01 MTR_8g099460 21.495 321 196 11 2 311 26 301 1.51e-14 75.1
MsG0880043437.01.T01 MTR_5g027370 22.981 322 190 13 2 307 50 329 2.06e-14 74.7
MsG0880043437.01.T01 MTR_8g030660 27.126 247 124 8 3 221 49 267 2.45e-14 72.8
MsG0880043437.01.T01 MTR_6g014720 25.595 336 181 16 9 338 54 326 5.03e-14 73.2
MsG0880043437.01.T01 MTR_2g025960 22.846 267 168 9 84 339 3 242 5.23e-14 72.4
MsG0880043437.01.T01 MTR_4g108810 31.250 176 100 7 214 382 78 239 6.06e-14 71.2
MsG0880043437.01.T01 MTR_1g097510 27.232 224 124 11 170 377 77 277 6.11e-14 72.0
MsG0880043437.01.T01 MTR_5g070088 26.087 322 195 13 2 313 28 316 6.68e-14 72.8
MsG0880043437.01.T01 MTR_2g435950 25.407 307 182 12 74 379 36 296 6.92e-14 72.0
MsG0880043437.01.T01 MTR_5g070080 25.191 393 233 15 2 379 31 377 8.09e-14 72.8
MsG0880043437.01.T01 MTR_2g024100 23.492 315 201 12 84 382 94 384 1.10e-13 72.4
MsG0880043437.01.T01 MTR_2g426070 21.958 378 239 15 2 365 27 362 1.19e-13 72.4
MsG0880043437.01.T01 MTR_5g070380 37.607 117 59 6 8 120 43 149 1.42e-13 68.9
MsG0880043437.01.T01 MTR_3g023940 25.000 392 219 18 1 379 54 383 3.92e-13 70.5
MsG0880043437.01.T01 MTR_7g056727 37.584 149 70 8 32 165 1 141 1.11e-12 67.4
MsG0880043437.01.T01 MTR_1g046600 33.540 161 84 7 6 153 72 222 1.12e-12 68.6
MsG0880043437.01.T01 MTR_2g079810 27.839 273 135 14 2 260 27 251 1.34e-12 68.2
MsG0880043437.01.T01 MTR_8g054320 25.524 286 152 9 101 379 69 300 1.99e-12 67.8
MsG0880043437.01.T01 MTR_4g132560 28.279 244 147 11 140 379 39 258 2.04e-12 67.0
MsG0880043437.01.T01 MTR_8g098640 35.366 82 47 3 288 363 2 83 2.75e-12 62.8
MsG0880043437.01.T01 MTR_1g068860 21.545 246 136 9 84 312 89 294 3.05e-12 67.8
MsG0880043437.01.T01 MTR_8g069515 32.593 135 73 6 1 125 36 162 7.66e-12 64.3
MsG0880043437.01.T01 MTR_4g117850 26.957 345 186 17 1 336 43 330 1.22e-11 65.9
MsG0880043437.01.T01 MTR_6g460450 42.708 96 47 4 1 94 49 138 1.35e-11 62.4
MsG0880043437.01.T01 MTR_2g024110 23.221 267 155 11 86 340 93 321 1.39e-11 65.9
MsG0880043437.01.T01 MTR_1g113900 29.150 247 127 13 139 379 41 245 4.11e-11 63.2
MsG0880043437.01.T01 MTR_3g011650 30.870 230 114 12 1 228 99 285 7.81e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043437.01.T01 AT3G06240 25.359 418 217 20 2 379 57 419 1.10e-15 78.6
MsG0880043437.01.T01 AT4G12560 22.642 265 177 8 83 341 90 332 1.67e-12 68.9
MsG0880043437.01.T01 AT4G12560 22.642 265 177 8 83 341 90 332 1.67e-12 68.9
MsG0880043437.01.T01 AT4G12560 22.642 265 177 8 83 341 90 332 1.67e-12 68.9

Find 72 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAACCCATTTCATTATA+TGG 0.169496 8:-24826473 MsG0880043437.01.T01:CDS
TTTCTTCTTAAGATGCATTT+TGG 0.203853 8:+24827280 None:intergenic
AAAGCACCAATGGAATTTAT+TGG 0.208359 8:-24826254 MsG0880043437.01.T01:CDS
CCATTTCATTATATGGAAAA+TGG 0.213937 8:-24826466 MsG0880043437.01.T01:CDS
ATGATCACTCGCTCTCTTTC+TGG 0.222076 8:-24827022 MsG0880043437.01.T01:CDS
ATATGGAAAATGGACGAATT+TGG 0.239807 8:-24826456 MsG0880043437.01.T01:CDS
TGTTATTGTCTCGCTTGATT+TGG 0.273290 8:-24826625 MsG0880043437.01.T01:CDS
GTTATTGTCTCGCTTGATTT+GGG 0.342708 8:-24826624 MsG0880043437.01.T01:CDS
GGGTATGGCCCTACAATATC+TGG 0.346764 8:+24827199 None:intergenic
ACCAGGCAATTCTCTATAAC+TGG 0.375835 8:-24826302 MsG0880043437.01.T01:CDS
CAATGGATTGATATGTTTGC+AGG 0.395196 8:-24827069 MsG0880043437.01.T01:CDS
ATCAGAGACAAAGGTGTTCC+AGG 0.398821 8:+24827313 None:intergenic
CATACCCATCTCTCATTTGC+TGG 0.400902 8:-24827183 MsG0880043437.01.T01:CDS
GAAGTTTGCAAGTTCACTTT+TGG 0.402755 8:-24826930 MsG0880043437.01.T01:CDS
CTTCTCTCCCGCAATTTACA+TGG 0.406386 8:-24827224 MsG0880043437.01.T01:CDS
ATGGCAGCCTTCAAGCTCTA+TGG 0.411179 8:-24826836 MsG0880043437.01.T01:CDS
GAAGGGTCTTTGAAAGTTGA+TGG 0.420308 8:-24826855 MsG0880043437.01.T01:CDS
TCTGGAACCATGTAAATTGC+GGG 0.422889 8:+24827217 None:intergenic
ATTTAAATAATAGTATCAAT+TGG 0.433750 8:-24826686 MsG0880043437.01.T01:CDS
AAGGATCATGATTGTTGGTA+AGG 0.438293 8:+24827138 None:intergenic
CCATTCTGAGACAGACATAA+TGG 0.442940 8:+24826357 None:intergenic
CAGATTGTTGGTTCATGCAA+TGG 0.452004 8:-24827086 MsG0880043437.01.T01:CDS
AATTTGGAGTTGAACAGTCT+TGG 0.456445 8:-24826440 MsG0880043437.01.T01:CDS
GAGGTTGTCGGTCAGATTGT+TGG 0.461652 8:-24827098 MsG0880043437.01.T01:CDS
AACTTCACACTGAGGTCGCT+TGG 0.462780 8:+24826947 None:intergenic
TCAGATGTAGTCCTTGTGGC+AGG 0.463714 8:+24826996 None:intergenic
TCTTCATTGAATCGGTAGTA+AGG 0.471789 8:+24827119 None:intergenic
CGGTACTCCATAGAGCTTGA+AGG 0.473908 8:+24826829 None:intergenic
TTGTTGTCTTTGAAAGTTGA+AGG 0.477725 8:-24826873 MsG0880043437.01.T01:CDS
AAATAATAGTATCAATTGGT+TGG 0.480792 8:-24826682 MsG0880043437.01.T01:CDS
GTAGTAAGGATCATGATTGT+TGG 0.485363 8:+24827133 None:intergenic
CCATCCATGTCTTTCAGTGC+CGG 0.485674 8:-24826544 MsG0880043437.01.T01:CDS
TACATGGTTCCAGATATTGT+AGG 0.492282 8:-24827208 MsG0880043437.01.T01:CDS
ACATGGTTCCAGATATTGTA+GGG 0.492800 8:-24827207 MsG0880043437.01.T01:CDS
CGACAACCTCTTCATTGAAT+CGG 0.504281 8:+24827111 None:intergenic
TCTTGTAATGAAGAGCTACT+TGG 0.508405 8:-24826567 MsG0880043437.01.T01:CDS
ATGATTGTTGGTAAGGGTGA+TGG 0.509447 8:+24827145 None:intergenic
TCGCTTGGCATAAGAGCAAA+AGG 0.509974 8:+24826962 None:intergenic
TGAAGTGCGTCTGTAAGTCC+TGG 0.514909 8:-24827331 MsG0880043437.01.T01:CDS
CGATTCAATGAAGAGGTTGT+CGG 0.520905 8:-24827110 MsG0880043437.01.T01:CDS
CAAGCTCTCAACATATGCCT+TGG 0.540321 8:+24826224 None:intergenic
ATCTGGAACCATGTAAATTG+CGG 0.546439 8:+24827216 None:intergenic
AGGAGAATTAAAAGCACCAA+TGG 0.548021 8:-24826264 MsG0880043437.01.T01:CDS
ACAGTCCAGCAAATGAGAGA+TGG 0.548081 8:+24827178 None:intergenic
GTTCCTCCAATAAATTCCAT+TGG 0.551117 8:+24826248 None:intergenic
TCAATTGGTTGGTCTTTCAT+CGG 0.551640 8:-24826671 MsG0880043437.01.T01:CDS
GCACCAATGGAATTTATTGG+AGG 0.553171 8:-24826251 MsG0880043437.01.T01:CDS
CAGTCCAGCAAATGAGAGAT+GGG 0.557341 8:+24827179 None:intergenic
AGACATAATGGAATCAATTG+AGG 0.560465 8:+24826369 None:intergenic
TTCAGTCAATCAAGTGGACC+AGG 0.560879 8:-24826319 MsG0880043437.01.T01:CDS
CCATTATGTCTGTCTCAGAA+TGG 0.567521 8:-24826357 MsG0880043437.01.T01:CDS
TGTTGTCTTTGAAAGTTGAA+GGG 0.571753 8:-24826872 MsG0880043437.01.T01:CDS
CAGATGTAGTCCTTGTGGCA+GGG 0.575951 8:+24826997 None:intergenic
TGATGAGGGACAACTACGAC+AGG 0.575959 8:+24826738 None:intergenic
AGGATCATGATTGTTGGTAA+GGG 0.582853 8:+24827139 None:intergenic
CGGTCCGGCACTGAAAGACA+TGG 0.584751 8:+24826540 None:intergenic
AGCTCTTCATTACAAGATGG+AGG 0.593933 8:+24826573 None:intergenic
ACTGGAGAGACAGTACCATA+AGG 0.597713 8:-24826284 MsG0880043437.01.T01:CDS
TTACTACCGATTCAATGAAG+AGG 0.600189 8:-24827117 MsG0880043437.01.T01:CDS
TCCAGTTATAGAGAATTGCC+TGG 0.602841 8:+24826301 None:intergenic
CAGCAAATGAGAGATGGGTA+TGG 0.611511 8:+24827184 None:intergenic
AGTAGCTCTTCATTACAAGA+TGG 0.611681 8:+24826570 None:intergenic
CTTTCTGGAACCCTGCCACA+AGG 0.611757 8:-24827007 MsG0880043437.01.T01:CDS
TAATTCAACTGAAACTTACA+AGG 0.618957 8:-24826901 MsG0880043437.01.T01:CDS
CCGGCACTGAAAGACATGGA+TGG 0.620184 8:+24826544 None:intergenic
AATTTATTGGAGGAACGCCA+AGG 0.627967 8:-24826241 MsG0880043437.01.T01:CDS
GCTCTTCATTACAAGATGGA+GGG 0.635969 8:+24826574 None:intergenic
GAAGATTGGATCAGAGACAA+AGG 0.662074 8:+24827304 None:intergenic
CGAGTGATCATGATAGTCAG+CGG 0.689895 8:+24827034 None:intergenic
AACTTGCAAACTTCACACTG+AGG 0.744860 8:+24826939 None:intergenic
TGTGTCAGATGTAGTCCTTG+TGG 0.753927 8:+24826992 None:intergenic
AATTGCGGGAGAGAAGTGTG+AGG 0.794039 8:+24827231 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATAATAATAATGCT+TGG - Chr8:24826753-24826772 MsG0880043437.01.T01:CDS 10.0%
!! ATTTAAATAATAGTATCAAT+TGG - Chr8:24826846-24826865 MsG0880043437.01.T01:CDS 10.0%
!!! GATTGATATAACTAATTTTA+AGG + Chr8:24827126-24827145 None:intergenic 15.0%
!! AAATAATAGTATCAATTGGT+TGG - Chr8:24826850-24826869 MsG0880043437.01.T01:CDS 20.0%
!! TAGTGAAATAAAAATGATGA+GGG + Chr8:24826811-24826830 None:intergenic 20.0%
!! TTAGTGAAATAAAAATGATG+AGG + Chr8:24826812-24826831 None:intergenic 20.0%
!!! CATTTTCCATATAATGAAAT+GGG + Chr8:24827068-24827087 None:intergenic 20.0%
!!! TTTTATTTCACTAAATGTGA+TGG - Chr8:24826818-24826837 MsG0880043437.01.T01:CDS 20.0%
! AGAAAACCCATTTCATTATA+TGG - Chr8:24827059-24827078 MsG0880043437.01.T01:CDS 25.0%
! CCATTTCATTATATGGAAAA+TGG - Chr8:24827066-24827085 MsG0880043437.01.T01:CDS 25.0%
! TAATTCAACTGAAACTTACA+AGG - Chr8:24826631-24826650 MsG0880043437.01.T01:CDS 25.0%
!! CCATTTTCCATATAATGAAA+TGG + Chr8:24827069-24827088 None:intergenic 25.0%
!! TTTCTTCTTAAGATGCATTT+TGG + Chr8:24826255-24826274 None:intergenic 25.0%
AGTCCTTTAACACAAAAAGA+CGG + Chr8:24827015-24827034 None:intergenic 30.0%
ATATGGAAAATGGACGAATT+TGG - Chr8:24827076-24827095 MsG0880043437.01.T01:CDS 30.0%
! AAAGCACCAATGGAATTTAT+TGG - Chr8:24827278-24827297 MsG0880043437.01.T01:CDS 30.0%
! AGACATAATGGAATCAATTG+AGG + Chr8:24827166-24827185 None:intergenic 30.0%
! CATATTTTCAGTCAATCAAG+TGG - Chr8:24827207-24827226 MsG0880043437.01.T01:CDS 30.0%
! TGTTGTCTTTGAAAGTTGAA+GGG - Chr8:24826660-24826679 MsG0880043437.01.T01:CDS 30.0%
! TTGTTGTCTTTGAAAGTTGA+AGG - Chr8:24826659-24826678 MsG0880043437.01.T01:CDS 30.0%
AAGGATCATGATTGTTGGTA+AGG + Chr8:24826397-24826416 None:intergenic 35.0%
ACATGGTTCCAGATATTGTA+GGG - Chr8:24826325-24826344 MsG0880043437.01.T01:CDS 35.0%
AGTAGCTCTTCATTACAAGA+TGG + Chr8:24826965-24826984 None:intergenic 35.0%
GTAGTAAGGATCATGATTGT+TGG + Chr8:24826402-24826421 None:intergenic 35.0%
GTTATTGTCTCGCTTGATTT+GGG - Chr8:24826908-24826927 MsG0880043437.01.T01:CDS 35.0%
GTTCCTCCAATAAATTCCAT+TGG + Chr8:24827287-24827306 None:intergenic 35.0%
TACATGGTTCCAGATATTGT+AGG - Chr8:24826324-24826343 MsG0880043437.01.T01:CDS 35.0%
TCTTCATTGAATCGGTAGTA+AGG + Chr8:24826416-24826435 None:intergenic 35.0%
TCTTGTAATGAAGAGCTACT+TGG - Chr8:24826965-24826984 MsG0880043437.01.T01:CDS 35.0%
TGTTATTGTCTCGCTTGATT+TGG - Chr8:24826907-24826926 MsG0880043437.01.T01:CDS 35.0%
TTTAACACAAAAAGACGGTC+CGG + Chr8:24827010-24827029 None:intergenic 35.0%
! AATTTGGAGTTGAACAGTCT+TGG - Chr8:24827092-24827111 MsG0880043437.01.T01:CDS 35.0%
! AGGATCATGATTGTTGGTAA+GGG + Chr8:24826396-24826415 None:intergenic 35.0%
! ATCTGGAACCATGTAAATTG+CGG + Chr8:24826319-24826338 None:intergenic 35.0%
! CAAAGTGAAAACTTTTGCAG+CGG + Chr8:24826726-24826745 None:intergenic 35.0%
! CTGCAAAAGTTTTCACTTTG+GGG - Chr8:24826726-24826745 MsG0880043437.01.T01:CDS 35.0%
! GAAGTTTGCAAGTTCACTTT+TGG - Chr8:24826602-24826621 MsG0880043437.01.T01:CDS 35.0%
! GCTGCAAAAGTTTTCACTTT+GGG - Chr8:24826725-24826744 MsG0880043437.01.T01:CDS 35.0%
! TGCAAAAGTTTTCACTTTGG+GGG - Chr8:24826727-24826746 MsG0880043437.01.T01:CDS 35.0%
!! AGGAGAATTAAAAGCACCAA+TGG - Chr8:24827268-24827287 MsG0880043437.01.T01:CDS 35.0%
!! CAATGGATTGATATGTTTGC+AGG - Chr8:24826463-24826482 MsG0880043437.01.T01:CDS 35.0%
!! GGTGCTTTTAATTCTCCTTA+TGG + Chr8:24827266-24827285 None:intergenic 35.0%
!! TCAATTGGTTGGTCTTTCAT+CGG - Chr8:24826861-24826880 MsG0880043437.01.T01:CDS 35.0%
!! TTACTACCGATTCAATGAAG+AGG - Chr8:24826415-24826434 MsG0880043437.01.T01:CDS 35.0%
AACTTGCAAACTTCACACTG+AGG + Chr8:24826596-24826615 None:intergenic 40.0%
AATTTATTGGAGGAACGCCA+AGG - Chr8:24827291-24827310 MsG0880043437.01.T01:CDS 40.0%
ACCAGGCAATTCTCTATAAC+TGG - Chr8:24827230-24827249 MsG0880043437.01.T01:CDS 40.0%
AGCTCTTCATTACAAGATGG+AGG + Chr8:24826962-24826981 None:intergenic 40.0%
CCATTATGTCTGTCTCAGAA+TGG - Chr8:24827175-24827194 MsG0880043437.01.T01:CDS 40.0%
CGACAACCTCTTCATTGAAT+CGG + Chr8:24826424-24826443 None:intergenic 40.0%
CGATTCAATGAAGAGGTTGT+CGG - Chr8:24826422-24826441 MsG0880043437.01.T01:CDS 40.0%
GAAGATTGGATCAGAGACAA+AGG + Chr8:24826231-24826250 None:intergenic 40.0%
GCACCAATGGAATTTATTGG+AGG - Chr8:24827281-24827300 MsG0880043437.01.T01:CDS 40.0%
GCTCTTCATTACAAGATGGA+GGG + Chr8:24826961-24826980 None:intergenic 40.0%
TCCAGTTATAGAGAATTGCC+TGG + Chr8:24827234-24827253 None:intergenic 40.0%
! ATGATTGTTGGTAAGGGTGA+TGG + Chr8:24826390-24826409 None:intergenic 40.0%
! CGCTGCAAAAGTTTTCACTT+TGG - Chr8:24826724-24826743 MsG0880043437.01.T01:CDS 40.0%
! GAAGGGTCTTTGAAAGTTGA+TGG - Chr8:24826677-24826696 MsG0880043437.01.T01:CDS 40.0%
! GCAAAAGTTTTCACTTTGGG+GGG - Chr8:24826728-24826747 MsG0880043437.01.T01:CDS 40.0%
! GGACCGTCTTTTTGTGTTAA+AGG - Chr8:24827009-24827028 MsG0880043437.01.T01:CDS 40.0%
! TCTGGAACCATGTAAATTGC+GGG + Chr8:24826318-24826337 None:intergenic 40.0%
!! AGATGCATTTTGGCGAAGAT+TGG + Chr8:24826245-24826264 None:intergenic 40.0%
!! CAGATTGTTGGTTCATGCAA+TGG - Chr8:24826446-24826465 MsG0880043437.01.T01:CDS 40.0%
!! CCATTCTGAGACAGACATAA+TGG + Chr8:24827178-24827197 None:intergenic 40.0%
ACAGTCCAGCAAATGAGAGA+TGG + Chr8:24826357-24826376 None:intergenic 45.0%
ACTGGAGAGACAGTACCATA+AGG - Chr8:24827248-24827267 MsG0880043437.01.T01:CDS 45.0%
ATGATCACTCGCTCTCTTTC+TGG - Chr8:24826510-24826529 MsG0880043437.01.T01:CDS 45.0%
CAAGCTCTCAACATATGCCT+TGG + Chr8:24827311-24827330 None:intergenic 45.0%
CAGCAAATGAGAGATGGGTA+TGG + Chr8:24826351-24826370 None:intergenic 45.0%
CAGTCCAGCAAATGAGAGAT+GGG + Chr8:24826356-24826375 None:intergenic 45.0%
CATACCCATCTCTCATTTGC+TGG - Chr8:24826349-24826368 MsG0880043437.01.T01:CDS 45.0%
CGAGTGATCATGATAGTCAG+CGG + Chr8:24826501-24826520 None:intergenic 45.0%
CTTCTCTCCCGCAATTTACA+TGG - Chr8:24826308-24826327 MsG0880043437.01.T01:CDS 45.0%
TCGCTTGGCATAAGAGCAAA+AGG + Chr8:24826573-24826592 None:intergenic 45.0%
TGTGTCAGATGTAGTCCTTG+TGG + Chr8:24826543-24826562 None:intergenic 45.0%
TTCAGTCAATCAAGTGGACC+AGG - Chr8:24827213-24827232 MsG0880043437.01.T01:CDS 45.0%
!! ATCAGAGACAAAGGTGTTCC+AGG + Chr8:24826222-24826241 None:intergenic 45.0%
AACTTCACACTGAGGTCGCT+TGG + Chr8:24826588-24826607 None:intergenic 50.0%
ATGGCAGCCTTCAAGCTCTA+TGG - Chr8:24826696-24826715 MsG0880043437.01.T01:CDS 50.0%
CAGATGTAGTCCTTGTGGCA+GGG + Chr8:24826538-24826557 None:intergenic 50.0%
CCATCCATGTCTTTCAGTGC+CGG - Chr8:24826988-24827007 MsG0880043437.01.T01:CDS 50.0%
CGGTACTCCATAGAGCTTGA+AGG + Chr8:24826706-24826725 None:intergenic 50.0%
GAGGTTGTCGGTCAGATTGT+TGG - Chr8:24826434-24826453 MsG0880043437.01.T01:CDS 50.0%
GGGTATGGCCCTACAATATC+TGG + Chr8:24826336-24826355 None:intergenic 50.0%
TCAGATGTAGTCCTTGTGGC+AGG + Chr8:24826539-24826558 None:intergenic 50.0%
TGAAGTGCGTCTGTAAGTCC+TGG - Chr8:24826201-24826220 MsG0880043437.01.T01:CDS 50.0%
TGATGAGGGACAACTACGAC+AGG + Chr8:24826797-24826816 None:intergenic 50.0%
! AATTGCGGGAGAGAAGTGTG+AGG + Chr8:24826304-24826323 None:intergenic 50.0%
! CCGGCACTGAAAGACATGGA+TGG + Chr8:24826991-24827010 None:intergenic 55.0%
!! CTTTCTGGAACCCTGCCACA+AGG - Chr8:24826525-24826544 MsG0880043437.01.T01:CDS 55.0%
! CGGTCCGGCACTGAAAGACA+TGG + Chr8:24826995-24827014 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 24826200 24827354 24826200 ID=MsG0880043437.01;Name=MsG0880043437.01
Chr8 mRNA 24826200 24827354 24826200 ID=MsG0880043437.01.T01;Parent=MsG0880043437.01;Name=MsG0880043437.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|384
Chr8 exon 24826200 24827354 24826200 ID=MsG0880043437.01.T01:exon:9245;Parent=MsG0880043437.01.T01
Chr8 CDS 24826200 24827354 24826200 ID=MsG0880043437.01.T01:cds;Parent=MsG0880043437.01.T01
Gene Sequence

>MsG0880043437.01.T01

ATGAAGTGCGTCTGTAAGTCCTGGAACACCTTTGTCTCTGATCCAATCTTCGCCAAAATGCATCTTAAGAAGAAAAATCTATCTACACGAAAGATACAACACCTCACACTTCTCTCCCGCAATTTACATGGTTCCAGATATTGTAGGGCCATACCCATCTCTCATTTGCTGGACTGTACGACAAACTCCATCACCCTTACCAACAATCATGATCCTTACTACCGATTCAATGAAGAGGTTGTCGGTCAGATTGTTGGTTCATGCAATGGATTGATATGTTTGCAGGCTATTTCTTTTACCGCTGACTATCATGATCACTCGCTCTCTTTCTGGAACCCTGCCACAAGGACTACATCTGACACATTTGTGTCCTTTTGCTCTTATGCCAAGCGACCTCAGTGTGAAGTTTGCAAGTTCACTTTTGGTTATGATAATTCAACTGAAACTTACAAGGTCGTGTTGTTGTCTTTGAAAGTTGAAGGGTCTTTGAAAGTTGATGGCAGCCTTCAAGCTCTATGGAGTACCGCTGCAAAAGTTTTCACTTTGGGGGGCGATAATAATAATAATAATGCTTGGAGAGATATTCAATGTTTTCCTGTCGTAGTTGTCCCTCATCATTTTTATTTCACTAAATGTGATGGTCTTTATTTAAATAATAGTATCAATTGGTTGGTCTTTCATCGGAAGAATCTTACGATTGAACAATCTGTTATTGTCTCGCTTGATTTGGGAACAGAGACATATACACAGTTTTTGCTCCCTCCATCTTGTAATGAAGAGCTACTTGGCCATCCATGTCTTTCAGTGCCGGACCGTCTTTTTGTGTTAAAGGACTGCATGTGTTTTTCTTATGATTTCAAGAAAACCCATTTCATTATATGGAAAATGGACGAATTTGGAGTTGAACAGTCTTGGACTCAATTCCTTAAAATTAGTTATATCAATCTTCAAATAGATTATCTTCCTCAATTGATTCCATTATGTCTGTCTCAGAATGGTGATACAATCATATTTTCAGTCAATCAAGTGGACCAGGCAATTCTCTATAACTGGAGAGACAGTACCATAAGGAGAATTAAAAGCACCAATGGAATTTATTGGAGGAACGCCAAGGCATATGTTGAGAGCTTGATATCGACAGACTTTAGAAAGTAA
Protein sequence

>MsG0880043437.01.T01

MKCVCKSWNTFVSDPIFAKMHLKKKNLSTRKIQHLTLLSRNLHGSRYCRAIPISHLLDCTTNSITLTNNHDPYYRFNEEVVGQIVGSCNGLICLQAISFTADYHDHSLSFWNPATRTTSDTFVSFCSYAKRPQCEVCKFTFGYDNSTETYKVVLLSLKVEGSLKVDGSLQALWSTAAKVFTLGGDNNNNNAWRDIQCFPVVVVPHHFYFTKCDGLYLNNSINWLVFHRKNLTIEQSVIVSLDLGTETYTQFLLPPSCNEELLGHPCLSVPDRLFVLKDCMCFSYDFKKTHFIIWKMDEFGVEQSWTQFLKISYINLQIDYLPQLIPLCLSQNGDTIIFSVNQVDQAILYNWRDSTIRRIKSTNGIYWRNAKAYVESLISTDFRK*