AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046678.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046678.01.T01 MTR_2g047200 74.065 401 87 9 1 395 1 390 0.0 573
MsG0880046678.01.T01 MTR_2g047892 50.864 405 177 13 1 395 1 393 7.28e-117 346
MsG0880046678.01.T01 MTR_0649s0020 48.072 389 179 11 18 395 8 384 1.17e-105 317
MsG0880046678.01.T01 MTR_0097s0030 47.870 399 177 13 8 398 2 377 1.77e-101 306
MsG0880046678.01.T01 MTR_2g047240 47.870 399 177 13 8 398 2 377 1.77e-101 306
MsG0880046678.01.T01 MTR_2g047878 47.382 401 159 14 3 395 4 360 2.34e-96 292
MsG0880046678.01.T01 MTR_6g016285 41.822 428 202 16 1 395 1 414 1.55e-86 270
MsG0880046678.01.T01 MTR_4g129190 42.677 396 195 11 19 395 4 386 7.48e-86 266
MsG0880046678.01.T01 MTR_8g066440 42.157 408 201 15 6 395 8 398 6.61e-84 262
MsG0880046678.01.T01 MTR_7g060940 40.988 405 189 16 16 398 17 393 9.09e-81 253
MsG0880046678.01.T01 MTR_3g080370 42.361 432 194 18 1 395 1 414 5.07e-80 253
MsG0880046678.01.T01 MTR_4g013180 40.933 386 196 11 15 383 5 375 8.14e-80 253
MsG0880046678.01.T01 MTR_2g043410 39.141 419 196 15 15 395 16 413 4.48e-78 247
MsG0880046678.01.T01 MTR_7g055870 40.233 430 183 16 20 395 12 421 6.71e-78 247
MsG0880046678.01.T01 MTR_7g078840 39.161 429 203 16 18 395 7 428 7.31e-78 247
MsG0880046678.01.T01 MTR_7g056503 38.571 420 207 15 1 395 1 394 4.87e-77 244
MsG0880046678.01.T01 MTR_0707s0020 38.391 435 204 13 13 395 18 440 5.45e-77 245
MsG0880046678.01.T01 MTR_4g033495 40.494 405 195 14 16 397 22 403 7.07e-77 245
MsG0880046678.01.T01 MTR_7g055930 39.813 427 189 16 20 395 12 421 1.24e-76 244
MsG0880046678.01.T01 MTR_7g057270 41.584 404 190 18 20 395 25 410 1.26e-76 243
MsG0880046678.01.T01 MTR_7g061050 40.852 399 196 12 14 395 5 380 3.70e-76 241
MsG0880046678.01.T01 MTR_4g030830 39.454 403 197 14 20 395 8 390 6.03e-76 241
MsG0880046678.01.T01 MTR_1g088120 38.588 425 190 16 18 395 7 407 1.40e-75 241
MsG0880046678.01.T01 MTR_7g078900 39.202 426 198 15 19 395 6 419 1.57e-75 241
MsG0880046678.01.T01 MTR_5g056020 38.249 434 202 18 6 395 6 417 2.30e-75 243
MsG0880046678.01.T01 MTR_3g464470 41.131 389 196 18 21 395 7 376 3.54e-75 238
MsG0880046678.01.T01 MTR_7g061090 40.920 413 204 13 6 395 7 402 5.34e-75 239
MsG0880046678.01.T01 MTR_6g055210 40.196 408 198 16 21 395 22 416 1.10e-74 239
MsG0880046678.01.T01 MTR_7g091630 41.289 419 183 18 19 395 30 427 1.39e-74 239
MsG0880046678.01.T01 MTR_3g464500 40.409 391 199 16 21 395 27 399 1.60e-74 238
MsG0880046678.01.T01 MTR_6g086920 38.031 447 203 14 13 395 30 466 1.65e-74 240
MsG0880046678.01.T01 MTR_7g056390 37.907 430 194 17 13 395 10 413 7.80e-74 236
MsG0880046678.01.T01 MTR_2g047895 48.162 272 114 7 117 379 37 290 7.81e-74 234
MsG0880046678.01.T01 MTR_5g068040 40.049 407 195 18 5 395 4 377 2.73e-73 234
MsG0880046678.01.T01 MTR_7g056290 37.204 422 202 17 16 395 17 417 4.28e-73 234
MsG0880046678.01.T01 MTR_4g019990 39.250 400 204 15 21 398 6 388 5.84e-73 233
MsG0880046678.01.T01 MTR_7g056760 39.558 407 196 15 16 395 18 401 8.44e-73 233
MsG0880046678.01.T01 MTR_7g052150 38.795 415 205 14 9 399 10 399 2.10e-72 232
MsG0880046678.01.T01 MTR_7g055977 40.102 394 206 11 16 396 2 378 3.86e-72 231
MsG0880046678.01.T01 MTR_7g066850 39.623 424 204 19 1 395 1 401 9.48e-72 232
MsG0880046678.01.T01 MTR_7g061060 42.636 387 176 14 14 379 5 366 1.26e-71 230
MsG0880046678.01.T01 MTR_7g066030 38.958 403 194 17 21 395 21 399 1.55e-71 230
MsG0880046678.01.T01 MTR_4g031020 37.813 439 205 18 9 395 2 424 1.60e-71 231
MsG0880046678.01.T01 MTR_7g078040 39.474 456 172 19 15 395 3 429 2.95e-71 230
MsG0880046678.01.T01 MTR_1g442850 40.360 389 193 12 23 395 7 372 4.21e-71 228
MsG0880046678.01.T01 MTR_7g070880 37.615 436 212 18 1 395 1 417 5.44e-71 229
MsG0880046678.01.T01 MTR_4g013185 36.591 440 193 15 18 395 7 422 6.55e-71 229
MsG0880046678.01.T01 MTR_2g043400 37.650 417 197 16 19 395 21 414 1.48e-70 228
MsG0880046678.01.T01 MTR_7g066100 38.333 420 188 17 14 395 4 390 1.78e-70 227
MsG0880046678.01.T01 MTR_7g055987 42.442 344 165 12 13 350 12 328 1.79e-70 226
MsG0880046678.01.T01 MTR_2g010950 38.571 420 200 19 13 395 3 401 1.84e-70 227
MsG0880046678.01.T01 MTR_7g070830 36.866 434 218 16 1 395 1 417 4.23e-70 227
MsG0880046678.01.T01 MTR_7g050520 38.592 412 216 16 1 398 1 389 4.70e-70 226
MsG0880046678.01.T01 MTR_7g056003 38.329 407 198 14 23 395 17 404 1.08e-69 225
MsG0880046678.01.T01 MTR_7g062100 42.394 401 186 21 15 395 18 393 1.14e-69 225
MsG0880046678.01.T01 MTR_6g092560 38.025 405 207 15 16 395 7 392 1.14e-69 226
MsG0880046678.01.T01 MTR_7g050480 38.537 410 210 17 7 398 4 389 1.35e-69 224
MsG0880046678.01.T01 MTR_3g072470 37.176 425 202 17 16 397 14 416 2.91e-69 224
MsG0880046678.01.T01 MTR_1g029650 38.747 431 183 16 14 395 2 400 4.23e-69 224
MsG0880046678.01.T01 MTR_7g028660 39.461 408 190 16 12 395 1 375 4.62e-69 223
MsG0880046678.01.T01 MTR_4g013175 39.535 430 194 17 18 395 7 422 7.17e-69 224
MsG0880046678.01.T01 MTR_7g445890 39.506 405 180 14 18 395 13 379 8.81e-69 222
MsG0880046678.01.T01 MTR_7g022600 38.863 422 216 18 5 395 8 418 1.71e-68 223
MsG0880046678.01.T01 MTR_4g030980 37.793 426 198 18 21 395 15 424 3.05e-68 222
MsG0880046678.01.T01 MTR_7g066000 39.036 415 200 20 7 395 12 399 3.88e-68 221
MsG0880046678.01.T01 MTR_2g010920 37.890 417 208 19 18 395 17 421 5.41e-68 221
MsG0880046678.01.T01 MTR_7g060960 40.153 391 182 14 13 398 24 367 1.08e-67 219
MsG0880046678.01.T01 MTR_4g024890 38.168 393 202 15 22 395 11 381 1.24e-67 219
MsG0880046678.01.T01 MTR_7g077070 38.363 391 200 13 19 377 14 395 2.17e-67 220
MsG0880046678.01.T01 MTR_4g011660 38.263 426 198 15 13 395 11 414 2.21e-67 219
MsG0880046678.01.T01 MTR_5g069930 38.614 404 187 19 19 395 4 373 2.34e-67 218
MsG0880046678.01.T01 MTR_7g035295 38.164 414 188 14 12 395 1 376 6.56e-67 218
MsG0880046678.01.T01 MTR_6g017280 39.747 395 203 12 19 395 7 384 2.43e-66 216
MsG0880046678.01.T01 MTR_7g062060 37.170 417 203 18 14 395 4 396 3.04e-66 216
MsG0880046678.01.T01 MTR_7g056200 39.541 392 188 12 19 395 21 378 3.13e-66 216
MsG0880046678.01.T01 MTR_7g079160 37.500 408 190 14 19 376 6 398 1.43e-65 216
MsG0880046678.01.T01 MTR_7g077990 37.355 431 193 16 1 395 1 390 2.16e-65 214
MsG0880046678.01.T01 MTR_7g056737 39.332 389 197 13 3 377 4 367 2.76e-65 214
MsG0880046678.01.T01 MTR_7g078860 39.386 391 179 15 21 377 9 375 9.62e-65 212
MsG0880046678.01.T01 MTR_4g030090 37.143 420 196 20 14 395 7 396 1.16e-64 212
MsG0880046678.01.T01 MTR_7g056717 37.592 407 214 14 2 395 3 382 1.56e-64 211
MsG0880046678.01.T01 MTR_5g069760 39.899 396 186 18 19 395 4 366 2.62e-64 210
MsG0880046678.01.T01 MTR_1g071010 37.046 413 203 16 8 395 3 383 3.06e-64 210
MsG0880046678.01.T01 MTR_0128s0010 37.237 427 203 19 1 395 1 394 5.94e-64 210
MsG0880046678.01.T01 MTR_7g056797 36.682 428 209 15 1 395 1 399 1.08e-63 209
MsG0880046678.01.T01 MTR_0242s0060 37.471 427 206 18 15 395 3 414 1.55e-63 209
MsG0880046678.01.T01 MTR_0242s0040 37.471 427 206 18 15 395 3 414 1.55e-63 209
MsG0880046678.01.T01 MTR_7g061010 39.440 393 206 13 13 395 14 384 1.10e-62 206
MsG0880046678.01.T01 MTR_7g077970 36.131 429 205 18 20 395 6 418 1.30e-62 207
MsG0880046678.01.T01 MTR_5g096710 36.675 409 197 16 17 395 19 395 1.32e-62 206
MsG0880046678.01.T01 MTR_1g015730 38.061 423 180 16 18 395 6 391 1.46e-62 206
MsG0880046678.01.T01 MTR_7g066060 37.469 403 202 16 21 395 23 403 3.07e-62 209
MsG0880046678.01.T01 MTR_0128s0070 37.500 416 214 20 6 399 6 397 3.37e-62 205
MsG0880046678.01.T01 MTR_4g034860 39.093 353 179 14 48 376 49 389 1.00e-61 204
MsG0880046678.01.T01 MTR_0128s0020 39.243 423 198 22 6 399 2 394 1.73e-61 203
MsG0880046678.01.T01 MTR_7g052670 38.298 423 207 18 13 395 13 421 2.73e-61 204
MsG0880046678.01.T01 MTR_7g066840 39.702 403 198 19 14 395 16 394 1.11e-60 201
MsG0880046678.01.T01 MTR_7g091640 39.706 340 156 14 19 334 33 347 1.48e-60 200
MsG0880046678.01.T01 MTR_2g006360 34.884 430 174 16 1 395 1 359 8.12e-60 198
MsG0880046678.01.T01 MTR_3g013470 35.593 413 177 13 28 393 2 372 6.30e-59 196
MsG0880046678.01.T01 MTR_7g056570 37.594 399 196 16 17 395 14 379 8.04e-59 197
MsG0880046678.01.T01 MTR_7g056710 36.765 408 214 17 1 395 1 377 1.17e-58 196
MsG0880046678.01.T01 MTR_7g055830 36.275 408 162 14 20 395 12 353 1.24e-58 195
MsG0880046678.01.T01 MTR_4g008790 37.717 403 182 15 18 377 36 412 1.31e-58 198
MsG0880046678.01.T01 MTR_5g043160 37.727 440 190 23 13 395 42 454 1.79e-58 197
MsG0880046678.01.T01 MTR_4g030110 36.683 398 190 15 5 377 14 374 2.06e-58 195
MsG0880046678.01.T01 MTR_0464s0020 34.988 423 211 16 19 395 21 425 2.16e-58 196
MsG0880046678.01.T01 MTR_3g437520 35.644 404 201 15 19 381 21 406 2.91e-58 197
MsG0880046678.01.T01 MTR_7g056260 38.922 334 167 12 13 331 6 317 4.71e-58 192
MsG0880046678.01.T01 MTR_7g066080 36.779 416 202 14 21 395 16 411 1.79e-57 194
MsG0880046678.01.T01 MTR_7g009265 44.224 303 132 13 117 395 31 320 2.48e-57 191
MsG0880046678.01.T01 MTR_1g015740 35.910 401 152 13 18 395 5 323 4.72e-57 190
MsG0880046678.01.T01 MTR_4g030760 35.484 403 194 16 19 398 71 430 4.56e-56 190
MsG0880046678.01.T01 MTR_1g112010 36.856 369 168 15 43 395 2 321 5.40e-56 187
MsG0880046678.01.T01 MTR_7g034310 50.877 228 91 9 171 395 15 224 1.77e-55 182
MsG0880046678.01.T01 MTR_7g066010 36.364 407 166 20 21 395 21 366 3.22e-54 184
MsG0880046678.01.T01 MTR_7g445750 37.069 348 148 13 13 320 15 331 2.51e-53 180
MsG0880046678.01.T01 MTR_6g065510 41.729 266 132 8 141 395 74 327 6.36e-53 179
MsG0880046678.01.T01 MTR_6g065510 72.000 50 14 0 19 68 21 70 8.14e-14 72.4
MsG0880046678.01.T01 MTR_7g056170 37.442 430 170 21 19 395 73 456 9.56e-53 182
MsG0880046678.01.T01 MTR_2g010900 35.955 356 179 16 39 367 1 334 2.64e-52 179
MsG0880046678.01.T01 MTR_7g055953 44.681 235 109 7 171 395 88 311 2.06e-51 175
MsG0880046678.01.T01 MTR_7g056820 35.294 374 199 13 21 377 7 354 5.75e-51 176
MsG0880046678.01.T01 MTR_2g461450 35.620 379 183 15 19 378 16 352 2.18e-50 173
MsG0880046678.01.T01 MTR_6g017270 34.171 398 178 15 17 395 5 337 8.10e-50 171
MsG0880046678.01.T01 MTR_1g047490 36.228 334 145 11 7 319 8 294 8.50e-50 171
MsG0880046678.01.T01 MTR_2g437110 34.375 416 200 17 13 395 14 389 2.49e-49 174
MsG0880046678.01.T01 MTR_7g113500 38.384 297 155 13 116 395 93 378 2.58e-49 171
MsG0880046678.01.T01 MTR_4g030790 35.522 335 145 10 14 335 12 288 3.67e-49 170
MsG0880046678.01.T01 MTR_7g077910 38.535 314 134 15 111 393 36 321 8.98e-49 169
MsG0880046678.01.T01 MTR_7g022670 33.251 403 186 14 9 395 12 347 1.84e-48 168
MsG0880046678.01.T01 MTR_4g129160 38.814 371 157 16 21 350 7 348 6.62e-48 167
MsG0880046678.01.T01 MTR_5g058620 40.467 257 114 9 170 395 30 278 2.01e-46 161
MsG0880046678.01.T01 MTR_1g058870 40.467 257 114 9 170 395 30 278 2.01e-46 161
MsG0880046678.01.T01 MTR_4g037465 34.656 378 209 17 16 377 17 372 4.21e-46 163
MsG0880046678.01.T01 MTR_6g017295 36.735 343 153 14 93 389 13 337 1.22e-43 159
MsG0880046678.01.T01 MTR_6g088385 39.781 274 127 12 144 395 58 315 1.37e-43 154
MsG0880046678.01.T01 MTR_6g017305 38.732 284 141 10 133 395 7 278 2.04e-43 153
MsG0880046678.01.T01 MTR_7g056173 43.145 248 115 11 171 398 25 266 2.15e-43 154
MsG0880046678.01.T01 MTR_2g060555 40.569 281 118 12 124 388 30 277 1.15e-42 151
MsG0880046678.01.T01 MTR_7g070440 30.653 398 227 16 16 395 2 368 5.40e-41 149
MsG0880046678.01.T01 MTR_4g006350 30.147 408 232 15 16 395 489 871 1.46e-40 154
MsG0880046678.01.T01 MTR_1g097330 33.333 387 186 19 12 377 8 343 9.66e-40 146
MsG0880046678.01.T01 MTR_8g101940 31.566 396 217 17 21 395 2 364 1.02e-39 145
MsG0880046678.01.T01 MTR_0267s0050 29.668 391 243 12 24 398 9 383 1.85e-39 145
MsG0880046678.01.T01 MTR_2g027820 32.520 369 171 13 39 398 1 300 5.23e-39 142
MsG0880046678.01.T01 MTR_3g013950 29.310 406 236 15 19 398 5 385 1.76e-37 140
MsG0880046678.01.T01 MTR_7g078940 37.349 332 153 16 2 289 8 328 4.78e-37 139
MsG0880046678.01.T01 MTR_7g056023 33.784 296 142 6 19 310 28 273 7.45e-37 135
MsG0880046678.01.T01 MTR_5g011350 38.462 234 119 8 82 310 33 246 1.86e-35 131
MsG0880046678.01.T01 MTR_2g021150 30.457 394 213 18 21 395 14 365 1.90e-35 134
MsG0880046678.01.T01 MTR_2g017720 43.243 222 104 11 182 394 88 296 2.93e-35 135
MsG0880046678.01.T01 MTR_3g007330 29.839 372 204 14 17 374 44 372 5.57e-35 133
MsG0880046678.01.T01 MTR_7g037670 37.413 286 124 12 6 278 8 251 6.30e-35 132
MsG0880046678.01.T01 MTR_1g094210 30.691 391 171 21 3 360 36 359 1.01e-34 132
MsG0880046678.01.T01 MTR_1g094210 30.105 382 185 20 3 360 36 359 1.02e-34 133
MsG0880046678.01.T01 MTR_7g061100 38.519 270 113 11 14 279 5 225 1.13e-34 130
MsG0880046678.01.T01 MTR_6g081280 38.554 249 115 13 165 395 9 237 1.30e-34 128
MsG0880046678.01.T01 MTR_1g097560 35.093 322 163 16 17 332 32 313 1.42e-34 132
MsG0880046678.01.T01 MTR_1g050542 31.579 380 198 15 15 377 47 381 2.33e-34 132
MsG0880046678.01.T01 MTR_7g091610 41.848 184 96 7 219 395 64 243 4.03e-34 127
MsG0880046678.01.T01 MTR_3g009240 32.737 391 171 22 14 372 30 360 2.31e-33 129
MsG0880046678.01.T01 MTR_2g046920 29.189 370 211 16 21 378 24 354 2.58e-33 128
MsG0880046678.01.T01 MTR_3g036290 33.746 323 165 16 13 330 16 294 7.24e-33 127
MsG0880046678.01.T01 MTR_2g010935 35.178 253 115 10 161 395 25 246 1.68e-32 123
MsG0880046678.01.T01 MTR_4g024870 35.764 288 148 11 6 275 29 297 1.75e-32 127
MsG0880046678.01.T01 MTR_5g011200 29.808 416 225 22 5 398 4 374 1.88e-32 126
MsG0880046678.01.T01 MTR_2g046900 29.737 380 204 16 21 378 28 366 3.87e-32 125
MsG0880046678.01.T01 MTR_7g006360 29.765 383 140 14 22 395 10 272 5.81e-32 122
MsG0880046678.01.T01 MTR_2g046800 29.078 423 215 19 15 395 10 389 1.29e-31 124
MsG0880046678.01.T01 MTR_8g030630 43.787 169 87 7 212 376 72 236 1.87e-31 124
MsG0880046678.01.T01 MTR_8g030630 40.741 189 79 7 192 376 280 439 2.86e-30 121
MsG0880046678.01.T01 MTR_4g061340 30.447 358 178 13 17 348 22 334 2.41e-31 123
MsG0880046678.01.T01 MTR_2g021155 29.208 404 189 16 15 384 32 372 2.76e-31 126
MsG0880046678.01.T01 MTR_2g021155 26.744 258 145 10 143 384 711 940 3.95e-16 80.9
MsG0880046678.01.T01 MTR_5g022420 30.919 359 195 16 21 370 27 341 1.15e-30 121
MsG0880046678.01.T01 MTR_2g021190 29.365 378 194 13 20 374 20 347 1.84e-30 120
MsG0880046678.01.T01 MTR_7g030040 29.771 393 166 15 11 395 43 333 2.55e-30 119
MsG0880046678.01.T01 MTR_7g061940 42.995 207 90 12 175 371 79 267 3.78e-30 117
MsG0880046678.01.T01 MTR_7g078960 33.455 275 136 12 124 375 1 251 6.35e-30 117
MsG0880046678.01.T01 MTR_1g097490 30.000 370 197 15 21 377 49 369 1.39e-29 118
MsG0880046678.01.T01 MTR_7g013590 29.771 393 217 16 24 397 39 391 1.60e-29 118
MsG0880046678.01.T01 MTR_3g011020 28.643 398 181 18 17 378 24 354 7.30e-29 116
MsG0880046678.01.T01 MTR_3g436150 30.623 369 193 19 14 359 27 355 7.55e-29 116
MsG0880046678.01.T01 MTR_2g029990 29.188 394 213 17 22 395 52 399 7.77e-29 116
MsG0880046678.01.T01 MTR_1g054575 31.232 349 186 15 3 334 25 336 9.26e-29 118
MsG0880046678.01.T01 MTR_6g053260 31.579 361 198 14 21 371 337 658 1.10e-28 118
MsG0880046678.01.T01 MTR_3g014540 30.723 332 174 15 17 331 25 317 3.20e-28 114
MsG0880046678.01.T01 MTR_3g011100 30.052 386 201 19 17 374 231 575 3.78e-28 116
MsG0880046678.01.T01 MTR_2g047832 26.585 410 261 16 5 395 8 396 3.97e-28 115
MsG0880046678.01.T01 MTR_8g030660 34.921 252 112 9 21 232 27 266 4.07e-28 112
MsG0880046678.01.T01 MTR_7g050490 40.394 203 96 8 16 210 3 188 4.63e-28 109
MsG0880046678.01.T01 MTR_5g057710 29.752 363 204 18 20 370 45 368 5.20e-28 114
MsG0880046678.01.T01 MTR_5g069950 36.364 209 96 9 139 344 33 207 5.30e-28 110
MsG0880046678.01.T01 MTR_4g020000 38.095 231 118 10 167 383 107 326 6.33e-28 113
MsG0880046678.01.T01 MTR_7g066040 37.129 202 94 9 111 287 14 207 8.31e-28 110
MsG0880046678.01.T01 MTR_3g030350 30.467 407 205 18 17 395 31 387 8.59e-28 113
MsG0880046678.01.T01 MTR_6g053240 28.099 363 212 11 15 363 22 349 1.51e-27 113
MsG0880046678.01.T01 MTR_4g108820 31.195 343 145 19 6 334 28 293 2.11e-27 110
MsG0880046678.01.T01 MTR_3g014570 28.866 388 204 18 14 378 24 362 4.28e-27 111
MsG0880046678.01.T01 MTR_6g042600 41.333 150 74 4 256 394 174 320 5.38e-27 111
MsG0880046678.01.T01 MTR_6g007135 30.414 411 237 17 3 395 7 386 5.53e-27 111
MsG0880046678.01.T01 MTR_7g407070 29.143 350 183 18 14 333 27 341 6.07e-27 111
MsG0880046678.01.T01 MTR_3g007270 30.270 370 199 17 15 363 42 373 6.67e-27 111
MsG0880046678.01.T01 MTR_5g057790 28.726 369 211 17 20 376 45 373 8.61e-27 110
MsG0880046678.01.T01 MTR_4g107820 28.857 350 178 16 6 327 9 315 2.63e-26 109
MsG0880046678.01.T01 MTR_4g107780 28.857 350 178 16 6 327 9 315 2.63e-26 109
MsG0880046678.01.T01 MTR_4g128320 33.594 256 119 12 135 376 37 255 2.83e-26 107
MsG0880046678.01.T01 MTR_8g467140 31.366 322 166 15 21 326 32 314 2.95e-26 108
MsG0880046678.01.T01 MTR_6g048120 31.657 338 179 13 16 334 31 335 3.12e-26 109
MsG0880046678.01.T01 MTR_4g107780 28.857 350 178 16 6 327 9 315 3.52e-26 109
MsG0880046678.01.T01 MTR_4g107820 28.857 350 178 16 6 327 9 315 4.16e-26 109
MsG0880046678.01.T01 MTR_7g078880 34.322 236 100 9 192 398 105 314 4.30e-26 108
MsG0880046678.01.T01 MTR_2g078900 29.641 334 173 14 17 333 29 317 5.25e-26 108
MsG0880046678.01.T01 MTR_3g024110 28.496 379 199 20 16 374 96 422 5.50e-26 109
MsG0880046678.01.T01 MTR_4g063955 39.344 183 98 6 13 189 17 192 5.78e-26 106
MsG0880046678.01.T01 MTR_7g055850 37.681 207 83 7 16 189 8 201 6.58e-26 106
MsG0880046678.01.T01 MTR_8g101580 31.105 344 176 18 16 340 40 341 6.83e-26 108
MsG0880046678.01.T01 MTR_3g011060 29.326 341 177 16 17 331 24 326 7.76e-26 108
MsG0880046678.01.T01 MTR_3g006670 30.514 331 169 14 17 327 45 334 7.82e-26 108
MsG0880046678.01.T01 MTR_2g046830 28.493 365 220 15 21 378 25 355 1.11e-25 107
MsG0880046678.01.T01 MTR_1g055375 31.722 331 164 17 24 331 7 298 1.11e-25 107
MsG0880046678.01.T01 MTR_4g031770 28.571 413 206 21 21 395 4 365 1.39e-25 107
MsG0880046678.01.T01 MTR_3g010390 29.759 373 197 17 13 359 27 360 2.35e-25 106
MsG0880046678.01.T01 MTR_3g013770 29.240 342 176 15 14 327 18 321 3.10e-25 106
MsG0880046678.01.T01 MTR_0044s0300 30.149 335 165 16 20 333 37 323 5.68e-25 105
MsG0880046678.01.T01 MTR_3g007360 28.042 378 195 14 24 374 55 382 6.98e-25 105
MsG0880046678.01.T01 MTR_2g078850 28.302 371 201 16 24 374 33 358 1.25e-24 104
MsG0880046678.01.T01 MTR_3g030330 30.678 339 191 13 8 341 9 308 1.38e-24 104
MsG0880046678.01.T01 MTR_2g055970 29.863 365 205 20 21 374 211 535 1.39e-24 105
MsG0880046678.01.T01 MTR_3g036335 28.704 432 208 22 5 395 19 391 1.62e-24 104
MsG0880046678.01.T01 MTR_6g065980 28.866 388 180 17 16 374 11 331 1.63e-24 103
MsG0880046678.01.T01 MTR_3g010920 32.915 319 150 15 20 327 43 308 2.28e-24 103
MsG0880046678.01.T01 MTR_7g058630 40.506 158 83 6 245 395 23 176 2.85e-24 99.0
MsG0880046678.01.T01 MTR_2g021252 27.160 405 189 16 24 395 50 381 2.91e-24 103
MsG0880046678.01.T01 MTR_3g007410 28.042 378 195 14 24 374 55 382 3.05e-24 103
MsG0880046678.01.T01 MTR_4g053470 30.769 377 163 18 19 376 20 317 3.74e-24 102
MsG0880046678.01.T01 MTR_7g070900 37.766 188 76 5 8 192 2 151 4.76e-24 103
MsG0880046678.01.T01 MTR_7g070900 36.111 180 65 6 169 334 233 376 8.53e-21 94.4
MsG0880046678.01.T01 MTR_3g010590 27.114 402 222 16 14 395 32 382 6.64e-24 102
MsG0880046678.01.T01 MTR_3g009260 29.534 386 187 22 14 372 35 362 7.40e-24 102
MsG0880046678.01.T01 MTR_3g024040 28.116 345 185 14 26 359 36 328 8.94e-24 102
MsG0880046678.01.T01 MTR_5g046300 28.701 331 173 18 17 331 2 285 1.46e-23 100
MsG0880046678.01.T01 MTR_5g046290 28.701 331 173 18 17 331 2 285 1.46e-23 100
MsG0880046678.01.T01 MTR_3g009310 29.032 372 205 15 20 374 41 370 1.60e-23 101
MsG0880046678.01.T01 MTR_6g048140 29.179 329 192 12 13 331 32 329 2.54e-23 101
MsG0880046678.01.T01 MTR_3g083640 27.792 403 233 17 5 395 43 399 3.53e-23 100
MsG0880046678.01.T01 MTR_4g006840 34.800 250 128 10 24 272 2 217 6.50e-23 96.7
MsG0880046678.01.T01 MTR_2g079810 30.882 272 151 9 16 277 2 246 7.29e-23 98.2
MsG0880046678.01.T01 MTR_7g056793 33.475 236 95 10 170 395 45 228 8.26e-23 96.3
MsG0880046678.01.T01 MTR_3g013740 28.443 334 187 13 20 332 43 345 9.38e-23 99.8
MsG0880046678.01.T01 MTR_2g021210 30.079 379 201 18 6 374 75 399 1.02e-22 99.8
MsG0880046678.01.T01 MTR_8g099460 29.573 328 181 12 19 327 3 299 1.06e-22 99.4
MsG0880046678.01.T01 MTR_4g024910 43.038 158 72 8 39 192 1 144 1.27e-22 97.8
MsG0880046678.01.T01 MTR_4g024910 37.778 135 75 5 266 394 130 261 1.51e-14 74.3
MsG0880046678.01.T01 MTR_6g027910 29.377 337 179 13 15 325 3 306 1.45e-22 98.6
MsG0880046678.01.T01 MTR_5g007610 30.814 344 161 18 20 331 40 338 1.61e-22 99.0
MsG0880046678.01.T01 MTR_3g030250 25.980 408 231 19 4 395 24 376 1.63e-22 98.6
MsG0880046678.01.T01 MTR_1g115160 28.329 413 223 20 5 395 2 363 1.69e-22 98.2
MsG0880046678.01.T01 MTR_3g006500 26.065 399 224 17 20 395 16 366 3.48e-22 97.4
MsG0880046678.01.T01 MTR_3g010870 27.723 404 222 20 12 395 28 381 3.97e-22 97.4
MsG0880046678.01.T01 MTR_7g007300 25.888 394 237 16 12 395 94 442 4.28e-22 97.8
MsG0880046678.01.T01 MTR_7g070937 41.007 139 58 6 171 293 10 140 5.69e-22 92.4
MsG0880046678.01.T01 MTR_8g073550 34.286 210 109 9 13 211 24 215 6.67e-22 94.0
MsG0880046678.01.T01 MTR_4g023080 25.000 368 221 12 21 380 9 329 7.21e-22 96.3
MsG0880046678.01.T01 MTR_5g057690 26.667 375 201 15 20 376 45 363 1.18e-21 95.9
MsG0880046678.01.T01 MTR_3g006570 28.040 403 222 20 16 395 16 373 1.89e-21 95.5
MsG0880046678.01.T01 MTR_4g055060 28.736 348 179 15 12 330 15 322 2.15e-21 95.5
MsG0880046678.01.T01 MTR_0760s0010 29.091 330 168 15 26 333 52 337 3.88e-21 94.7
MsG0880046678.01.T01 MTR_3g010430 29.002 431 197 23 16 399 31 399 5.58e-21 94.4
MsG0880046678.01.T01 MTR_5g057020 28.049 328 175 16 20 336 45 322 8.55e-21 93.2
MsG0880046678.01.T01 MTR_3g007430 27.576 330 174 13 24 332 46 331 9.59e-21 93.6
MsG0880046678.01.T01 MTR_3g009300 28.533 368 174 18 24 374 37 332 1.02e-20 92.8
MsG0880046678.01.T01 MTR_3g030310 27.596 366 216 15 20 371 20 350 1.54e-20 92.8
MsG0880046678.01.T01 MTR_7g078050 41.606 137 69 3 18 151 3 131 1.82e-20 90.1
MsG0880046678.01.T01 MTR_3g010970 31.529 314 159 16 24 327 51 318 1.97e-20 92.4
MsG0880046678.01.T01 MTR_6g013270 28.933 356 174 18 2 327 10 316 2.02e-20 92.4
MsG0880046678.01.T01 MTR_3g010520 27.204 397 204 16 20 395 24 356 2.03e-20 92.0
MsG0880046678.01.T01 MTR_0128s0110 33.659 205 117 10 195 391 4 197 3.15e-20 88.6
MsG0880046678.01.T01 MTR_5g009060 29.703 404 182 24 20 372 24 376 3.32e-20 92.0
MsG0880046678.01.T01 MTR_8g069515 37.908 153 82 5 18 159 13 163 4.23e-20 87.8
MsG0880046678.01.T01 MTR_3g006530 26.161 409 228 18 16 395 30 393 4.29e-20 91.7
MsG0880046678.01.T01 MTR_8g062660 27.874 348 176 13 21 338 22 324 7.16e-20 92.0
MsG0880046678.01.T01 MTR_6g004660 28.000 350 204 13 9 339 4 324 1.08e-19 90.1
MsG0880046678.01.T01 MTR_3g030240 30.473 338 165 18 14 337 33 314 1.24e-19 90.1
MsG0880046678.01.T01 MTR_1g054725 24.697 413 245 17 5 395 4 372 1.51e-19 89.7
MsG0880046678.01.T01 MTR_1g056710 30.245 367 160 22 17 341 29 341 1.77e-19 89.7
MsG0880046678.01.T01 MTR_1g068835 28.443 334 170 13 21 330 4 292 1.79e-19 89.7
MsG0880046678.01.T01 MTR_7g066830 34.973 183 93 8 41 214 15 180 1.85e-19 85.9
MsG0880046678.01.T01 MTR_3g055000 39.706 136 64 6 265 395 1 123 2.07e-19 84.0
MsG0880046678.01.T01 MTR_7g060930 50.685 73 36 0 245 317 6 78 2.28e-19 82.4
MsG0880046678.01.T01 MTR_3g006640 28.958 259 112 13 106 333 7 224 3.99e-19 87.4
MsG0880046678.01.T01 MTR_3g023940 27.344 384 235 17 20 395 33 380 4.66e-19 88.6
MsG0880046678.01.T01 MTR_5g046260 26.829 328 153 17 17 331 2 255 4.81e-19 87.0
MsG0880046678.01.T01 MTR_4g133170 25.745 369 209 15 21 370 4 326 5.12e-19 88.6
MsG0880046678.01.T01 MTR_3g010620 28.793 323 170 15 17 327 29 303 5.36e-19 88.2
MsG0880046678.01.T01 MTR_7g062070 37.908 153 74 9 237 373 39 186 6.48e-19 84.7
MsG0880046678.01.T01 MTR_2g028140 28.653 349 173 16 21 327 5 319 8.14e-19 88.2
MsG0880046678.01.T01 MTR_3g024150 29.283 321 166 14 24 327 38 314 8.18e-19 87.8
MsG0880046678.01.T01 MTR_7g056727 40.426 141 64 5 64 193 5 136 3.68e-18 83.2
MsG0880046678.01.T01 MTR_4g089125 54.762 84 31 3 18 101 9 85 3.98e-18 79.3
MsG0880046678.01.T01 MTR_3g058470 28.313 332 162 11 15 329 31 303 7.00e-18 84.7
MsG0880046678.01.T01 MTR_2g028110 26.364 330 182 12 21 327 4 295 7.60e-18 84.7
MsG0880046678.01.T01 MTR_3g058440 28.571 287 141 12 17 278 29 276 9.58e-18 83.6
MsG0880046678.01.T01 MTR_4g021785 25.067 371 216 15 21 379 9 329 1.03e-17 84.3
MsG0880046678.01.T01 MTR_3g023930 26.368 402 211 19 15 395 27 364 1.49e-17 84.0
MsG0880046678.01.T01 MTR_7g445580 36.296 135 79 5 244 377 16 144 1.79e-17 79.3
MsG0880046678.01.T01 MTR_1g055055 26.786 336 186 14 16 338 19 307 1.91e-17 83.2
MsG0880046678.01.T01 MTR_7g089830 41.600 125 48 5 257 370 31 141 2.80e-17 78.6
MsG0880046678.01.T01 MTR_3g036430 27.414 321 160 13 20 331 19 275 3.33e-17 82.4
MsG0880046678.01.T01 MTR_7g021580 37.559 213 96 10 21 227 33 214 3.86e-17 81.6
MsG0880046678.01.T01 MTR_1g115185 29.683 347 186 15 1 327 16 324 4.05e-17 82.8
MsG0880046678.01.T01 MTR_6g460450 42.623 122 51 5 18 128 26 139 4.55e-17 78.2
MsG0880046678.01.T01 MTR_2g028160 27.954 347 188 13 21 334 5 322 5.14e-17 82.8
MsG0880046678.01.T01 MTR_4g116330 26.437 348 194 14 5 335 11 313 5.56e-17 82.4
MsG0880046678.01.T01 MTR_4g117850 26.647 334 174 17 13 324 19 303 8.84e-17 81.6
MsG0880046678.01.T01 MTR_2g031680 26.579 380 209 15 20 377 5 336 9.58e-17 81.6
MsG0880046678.01.T01 MTR_3g024130 28.873 284 135 16 114 374 55 294 1.00e-16 80.9
MsG0880046678.01.T01 MTR_3g058480 29.930 284 145 13 15 278 33 282 1.58e-16 80.5
MsG0880046678.01.T01 MTR_1g112930 29.118 340 190 14 18 348 22 319 3.05e-16 80.1
MsG0880046678.01.T01 MTR_6g004210 27.356 329 180 16 35 331 39 340 3.11e-16 80.5
MsG0880046678.01.T01 MTR_2g426090 27.968 379 222 17 19 376 5 353 3.60e-16 80.1
MsG0880046678.01.T01 MTR_3g103020 26.048 334 168 13 21 325 20 303 4.90e-16 79.3
MsG0880046678.01.T01 MTR_2g028130 27.003 337 194 14 21 330 5 316 5.85e-16 79.3
MsG0880046678.01.T01 MTR_3g007300 28.529 333 169 14 14 340 44 313 8.62e-16 78.6
MsG0880046678.01.T01 MTR_4g053510 41.379 116 51 4 19 125 20 127 8.87e-16 73.9
MsG0880046678.01.T01 MTR_7g077930 58.929 56 23 0 19 74 17 72 1.28e-15 72.4
MsG0880046678.01.T01 MTR_2g031720 27.632 380 208 17 21 376 6 342 1.55e-15 78.2
MsG0880046678.01.T01 MTR_3g011650 33.180 217 100 11 14 214 74 261 2.06e-15 76.6
MsG0880046678.01.T01 MTR_6g021880 25.949 316 190 11 33 332 32 319 2.16e-15 77.4
MsG0880046678.01.T01 MTR_4g070550 28.485 330 192 12 21 327 5 313 2.54e-15 77.4
MsG0880046678.01.T01 MTR_0064s0060 40.650 123 68 3 5 124 2 122 4.00e-15 72.4
MsG0880046678.01.T01 MTR_1g058760 64.815 54 19 0 15 68 5 58 5.12e-15 70.1
MsG0880046678.01.T01 MTR_3g010870 30.085 236 126 10 10 232 26 235 5.39e-15 75.9
MsG0880046678.01.T01 MTR_4g116330 28.400 250 143 10 5 243 11 235 5.74e-15 75.9
MsG0880046678.01.T01 MTR_4g023070 24.765 319 194 10 19 325 1 285 6.28e-15 76.3
MsG0880046678.01.T01 MTR_3g009250 32.719 217 101 12 14 214 35 222 7.61e-15 73.9
MsG0880046678.01.T01 MTR_1g055070 27.055 292 150 12 17 278 45 303 9.09e-15 75.9
MsG0880046678.01.T01 MTR_4g023120 24.765 319 190 10 21 325 3 285 9.94e-15 75.5
MsG0880046678.01.T01 MTR_4g023090 24.047 341 189 13 21 337 16 310 1.02e-14 75.5
MsG0880046678.01.T01 MTR_2g043420 35.537 121 74 2 23 140 28 147 2.15e-14 70.9
MsG0880046678.01.T01 MTR_3g083010 26.036 338 193 12 21 326 6 318 2.35e-14 74.7
MsG0880046678.01.T01 MTR_2g046860 25.862 290 162 13 115 388 5 257 2.94e-14 73.6
MsG0880046678.01.T01 MTR_1g068860 26.506 332 185 14 19 330 2 294 5.29e-14 73.2
MsG0880046678.01.T01 MTR_2g078870 24.286 350 189 17 65 395 12 304 6.56e-14 72.4
MsG0880046678.01.T01 MTR_2g426020 24.934 381 216 14 21 373 6 344 7.62e-14 73.2
MsG0880046678.01.T01 MTR_6g014720 28.116 345 176 19 2 327 7 298 8.15e-14 72.8
MsG0880046678.01.T01 MTR_0667s0010 25.000 348 193 14 21 338 6 315 8.18e-14 72.8
MsG0880046678.01.T01 MTR_5g057643 28.378 222 139 10 20 234 45 253 8.28e-14 71.6
MsG0880046678.01.T01 MTR_4g109280 24.372 398 221 15 21 395 8 348 1.13e-13 72.0
MsG0880046678.01.T01 MTR_3g030320 32.127 221 108 11 118 331 44 229 1.13e-13 71.6
MsG0880046678.01.T01 MTR_2g426060 26.567 335 188 15 21 327 6 310 1.20e-13 72.4
MsG0880046678.01.T01 MTR_4g117770 25.610 328 187 13 24 334 14 301 1.38e-13 72.0
MsG0880046678.01.T01 MTR_4g117810 25.610 328 187 13 24 334 14 301 1.38e-13 72.0
MsG0880046678.01.T01 MTR_7g016930 26.706 337 184 16 21 335 16 311 1.48e-13 71.6
MsG0880046678.01.T01 MTR_3g034180 24.566 346 187 12 21 335 123 425 2.17e-13 72.0
MsG0880046678.01.T01 MTR_2g425980 25.455 385 224 15 21 376 5 355 2.17e-13 71.6
MsG0880046678.01.T01 MTR_1g055135 24.709 344 202 10 11 334 4 310 2.45e-13 71.2
MsG0880046678.01.T01 MTR_4g109270 26.183 317 191 14 19 325 6 289 2.74e-13 70.9
MsG0880046678.01.T01 MTR_1g068875 25.000 376 220 14 21 378 4 335 2.75e-13 71.2
MsG0880046678.01.T01 MTR_2g426070 26.748 329 194 13 22 327 7 311 6.19e-13 70.1
MsG0880046678.01.T01 MTR_6g027890 26.908 249 127 11 117 340 53 271 6.24e-13 69.7
MsG0880046678.01.T01 MTR_4g117780 25.225 333 196 13 17 334 7 301 7.54e-13 69.7
MsG0880046678.01.T01 MTR_1g100763 26.923 312 163 16 27 331 4 257 1.15e-12 68.6
MsG0880046678.01.T01 MTR_3g009290 28.881 277 139 15 10 272 25 257 1.49e-12 67.8
MsG0880046678.01.T01 MTR_3g034130 24.776 335 198 12 21 334 9 310 1.69e-12 68.6
MsG0880046678.01.T01 MTR_5g070130 24.405 336 202 10 21 337 11 313 1.99e-12 68.6
MsG0880046678.01.T01 MTR_2g025420 25.664 339 198 14 20 327 5 320 2.97e-12 68.2
MsG0880046678.01.T01 MTR_5g056990 29.245 212 113 10 174 376 36 219 3.40e-12 66.2
MsG0880046678.01.T01 MTR_3g010440 36.879 141 70 7 14 149 21 147 4.11e-12 67.4
MsG0880046678.01.T01 MTR_2g031700 28.870 239 127 10 21 244 6 216 4.52e-12 66.6
MsG0880046678.01.T01 MTR_5g070088 24.713 348 191 11 21 333 7 318 5.64e-12 67.0
MsG0880046678.01.T01 MTR_5g057040 29.648 199 122 10 20 212 45 231 6.99e-12 67.8
MsG0880046678.01.T01 MTR_8g013010 30.189 212 113 10 21 216 54 246 8.75e-12 66.2
MsG0880046678.01.T01 MTR_1g016960 41.584 101 48 4 306 395 152 252 9.90e-12 65.1
MsG0880046678.01.T01 MTR_2g021050 24.540 326 180 12 21 327 5 283 1.48e-11 65.9
MsG0880046678.01.T01 MTR_7g017040 25.287 348 191 13 21 329 16 333 1.58e-11 65.9
MsG0880046678.01.T01 MTR_5g010660 24.629 337 167 12 21 327 34 313 2.47e-11 65.5
MsG0880046678.01.T01 MTR_2g048580 24.691 324 173 12 19 324 6 276 3.35e-11 64.7
MsG0880046678.01.T01 MTR_1g114650 29.612 206 100 11 163 359 11 180 6.36e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046678.01.T01 AT3G23880 30.045 223 136 7 18 232 11 221 3.39e-16 79.7
MsG0880046678.01.T01 AT4G12560 26.113 337 184 14 19 327 2 301 2.64e-15 77.4
MsG0880046678.01.T01 AT4G12560 26.113 337 184 14 19 327 2 301 2.64e-15 77.4
MsG0880046678.01.T01 AT4G12560 26.113 337 184 14 19 327 2 301 2.64e-15 77.4
MsG0880046678.01.T01 AT1G47790 28.986 207 113 9 17 212 21 204 8.70e-13 69.7
MsG0880046678.01.T01 AT3G10240 29.851 201 113 8 21 212 27 208 1.21e-12 69.3
MsG0880046678.01.T01 AT1G47730 26.603 312 161 15 21 312 25 288 1.94e-11 65.5
MsG0880046678.01.T01 AT5G10340 27.240 279 148 13 21 272 69 319 3.30e-11 65.1
MsG0880046678.01.T01 AT1G50870 26.141 241 137 9 7 228 13 231 3.75e-11 64.7
MsG0880046678.01.T01 AT1G32420 28.926 242 121 11 8 228 22 233 4.71e-11 63.9

Find 70 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGACTTCTCTCTCCGTTTC+TGG 0.142589 8:-76652363 MsG0880046678.01.T01:CDS
TATCTTAGTATTGGTCTTAA+TGG 0.218802 8:-76652121 MsG0880046678.01.T01:CDS
TATGATTATCTCACTTGATT+TGG 0.219143 8:-76651993 MsG0880046678.01.T01:CDS
GTCTCGATACTCGTCAGTTT+TGG 0.301210 8:+76652381 None:intergenic
GAAGTTCCAATACCTTCTAT+TGG 0.323337 8:-76651637 MsG0880046678.01.T01:CDS
ATGATTATCTCACTTGATTT+GGG 0.342866 8:-76651992 MsG0880046678.01.T01:CDS
GTCATTCCTTATCTTAGTAT+TGG 0.366283 8:-76652130 MsG0880046678.01.T01:CDS
GCGATAAATATAATAATGTT+TGG 0.367479 8:-76652174 MsG0880046678.01.T01:CDS
GTGAATTGAGGATGTTGTTC+TGG 0.367624 8:+76652529 None:intergenic
AGATGCAAGTTGACGAATAA+AGG 0.379548 8:+76652610 None:intergenic
TAATTTAACCAACAAATATA+AGG 0.381262 8:-76652239 MsG0880046678.01.T01:CDS
AACAAGTTGTTCTCTATAAT+AGG 0.391548 8:-76651682 MsG0880046678.01.T01:CDS
TGAGTAATAGTAGTCTTGTT+TGG 0.405221 8:-76652087 MsG0880046678.01.T01:CDS
GGCAACCACCTTATATTTGT+TGG 0.416028 8:+76652231 None:intergenic
TTCGCCGCCAGTGACCCTTC+CGG 0.429400 8:-76652728 MsG0880046678.01.T01:CDS
TCCAACAATGATCTCATGGC+TGG 0.434527 8:+76652337 None:intergenic
AACAAGTATTACACAGTTGT+TGG 0.438285 8:-76652439 MsG0880046678.01.T01:CDS
TCTATTATGATTATGATCAA+TGG 0.446382 8:-76652045 MsG0880046678.01.T01:CDS
CCCAGCCATGAGATCATTGT+TGG 0.447583 8:-76652338 MsG0880046678.01.T01:CDS
TGTAAGAAGCAGATCATAAG+AGG 0.454020 8:+76651582 None:intergenic
CTTACTTTCAACATAATGCT+TGG 0.454868 8:+76651607 None:intergenic
AGGGTCACTGGCGGCGAAGG+AGG 0.454908 8:+76652733 None:intergenic
TGAGGATGTTGTTCTGGAAA+CGG 0.460592 8:+76652535 None:intergenic
GGAAGGGTCACTGGCGGCGA+AGG 0.461553 8:+76652730 None:intergenic
AGATCATCCGGAAGGGTCAC+TGG 0.475046 8:+76652721 None:intergenic
ATAATCATAATAGACGTTAT+CGG 0.476965 8:+76652054 None:intergenic
TAATCATAATAGACGTTATC+GGG 0.478293 8:+76652055 None:intergenic
TTCATCAACACAGATACAAT+TGG 0.478620 8:+76651908 None:intergenic
ATCATACATTGATCAACGGT+TGG 0.481778 8:+76652010 None:intergenic
CTTAGTATTGGTCTTAATGG+TGG 0.488094 8:-76652118 MsG0880046678.01.T01:CDS
AAGGAATGACAGGAAAACTT+TGG 0.488390 8:+76652143 None:intergenic
AATTTCGAGTTGAAGCGTCT+TGG 0.489799 8:-76651826 MsG0880046678.01.T01:CDS
ACAGTTGTTGGTTCTTGCAA+TGG 0.490527 8:-76652427 MsG0880046678.01.T01:CDS
CTATTATGATTATGATCAAT+GGG 0.494736 8:-76652044 MsG0880046678.01.T01:CDS
CATCACATCAATGATCACTT+TGG 0.496524 8:-76651767 MsG0880046678.01.T01:CDS
TCATGGCTGGGTTCCAGAAA+CGG 0.504230 8:+76652350 None:intergenic
AAGCGATTTCACGTCAAGAA+AGG 0.524428 8:+76652681 None:intergenic
CATTTACTTGAAAATCAGTC+GGG 0.534995 8:-76652490 MsG0880046678.01.T01:CDS
ACTTCGGTGATGAGATCATC+CGG 0.537522 8:+76652709 None:intergenic
ATACTAAGATAAGGAATGAC+AGG 0.538252 8:+76652133 None:intergenic
GGGTCACTGGCGGCGAAGGA+GGG 0.538365 8:+76652734 None:intergenic
TTAAGACCAATACTAAGATA+AGG 0.555147 8:+76652124 None:intergenic
CCATTTACTTGAAAATCAGT+CGG 0.557094 8:-76652491 MsG0880046678.01.T01:CDS
CAAGTAAATGGTGTATGCTG+AGG 0.558875 8:+76652503 None:intergenic
ATAATAGACGTTATCGGGAA+GGG 0.560087 8:+76652060 None:intergenic
TTCATCCAACAATGATCTCA+TGG 0.564231 8:+76652333 None:intergenic
CATAATAGACGTTATCGGGA+AGG 0.569764 8:+76652059 None:intergenic
GAACTTGATCAAAATCTCGA+GGG 0.582012 8:+76651942 None:intergenic
CCAACAATGATCTCATGGCT+GGG 0.584786 8:+76652338 None:intergenic
ACTTGTTGTCCATCGTCATA+CGG 0.586107 8:+76652455 None:intergenic
GAATAAAATACTGTTAAGTG+TGG 0.601949 8:+76652565 None:intergenic
CGGTGATGAGATCATCCGGA+AGG 0.602245 8:+76652713 None:intergenic
AAGTAAATGGTGTATGCTGA+GGG 0.602477 8:+76652504 None:intergenic
TGAGAATCTGAAAGAGTCAG+TGG 0.606213 8:+76652273 None:intergenic
ATGCTGAGGGCAGTGAATTG+AGG 0.609551 8:+76652517 None:intergenic
GGAACTTGATCAAAATCTCG+AGG 0.610248 8:+76651941 None:intergenic
TTTAACCAACAAATATAAGG+TGG 0.612164 8:-76652236 MsG0880046678.01.T01:CDS
TCAAATGTGTGAGCAAGTCA+TGG 0.613211 8:-76652651 MsG0880046678.01.T01:CDS
CAAGTTGACGAATAAAGGAT+CGG 0.621506 8:+76652615 None:intergenic
GTCAAGAAAGGATAGGACTT+CGG 0.624128 8:+76652693 None:intergenic
TACTAATTACCGTATGACGA+TGG 0.625065 8:-76652464 MsG0880046678.01.T01:CDS
AAACTCTCACGTCACTAAGA+CGG 0.625930 8:+76652206 None:intergenic
AACTTGATCAAAATCTCGAG+GGG 0.636377 8:+76651943 None:intergenic
ATTTCACGTCAAGAAAGGAT+AGG 0.636636 8:+76652686 None:intergenic
GTATATGTACGTCTAAGTCT+CGG 0.644479 8:-76652768 MsG0880046678.01.T01:CDS
GATAATCATACATTGATCAA+CGG 0.654365 8:+76652006 None:intergenic
TCTCACGTCACTAAGACGGA+AGG 0.659287 8:+76652210 None:intergenic
GGTGATGAGATCATCCGGAA+GGG 0.667165 8:+76652714 None:intergenic
TCATCCGGAAGGGTCACTGG+CGG 0.685321 8:+76652724 None:intergenic
ACTTGATCAAAATCTCGAGG+GGG 0.733868 8:+76651944 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTAACCAACAAATATA+AGG - Chr8:76652128-76652147 MsG0880046678.01.T01:CDS 15.0%
!!! AGGAAAATTATTTTATTATG+TGG - Chr8:76652508-76652527 MsG0880046678.01.T01:CDS 15.0%
!!! CATAATAAAATAATTTTCCT+TGG + Chr8:76652508-76652527 None:intergenic 15.0%
!! ATAATCATAATAGACGTTAT+CGG + Chr8:76652316-76652335 None:intergenic 20.0%
!! CTATTATGATTATGATCAAT+GGG - Chr8:76652323-76652342 MsG0880046678.01.T01:CDS 20.0%
!! GCGATAAATATAATAATGTT+TGG - Chr8:76652193-76652212 MsG0880046678.01.T01:CDS 20.0%
!! TCTATTATGATTATGATCAA+TGG - Chr8:76652322-76652341 MsG0880046678.01.T01:CDS 20.0%
! AACAAGTTGTTCTCTATAAT+AGG - Chr8:76652685-76652704 MsG0880046678.01.T01:CDS 25.0%
! ATGATTATCTCACTTGATTT+GGG - Chr8:76652375-76652394 MsG0880046678.01.T01:CDS 25.0%
! GAATAAAATACTGTTAAGTG+TGG + Chr8:76651805-76651824 None:intergenic 25.0%
! GATAATCATACATTGATCAA+CGG + Chr8:76652364-76652383 None:intergenic 25.0%
! TAATCATAATAGACGTTATC+GGG + Chr8:76652315-76652334 None:intergenic 25.0%
! TATGATTATCTCACTTGATT+TGG - Chr8:76652374-76652393 MsG0880046678.01.T01:CDS 25.0%
! TTAAGACCAATACTAAGATA+AGG + Chr8:76652246-76652265 None:intergenic 25.0%
! TTTAACCAACAAATATAAGG+TGG - Chr8:76652131-76652150 MsG0880046678.01.T01:CDS 25.0%
!! AAAAAACCAATAGAAGGTAT+TGG + Chr8:76652739-76652758 None:intergenic 25.0%
!!! TATCTTAGTATTGGTCTTAA+TGG - Chr8:76652246-76652265 MsG0880046678.01.T01:CDS 25.0%
AACAAGTATTACACAGTTGT+TGG - Chr8:76651928-76651947 MsG0880046678.01.T01:CDS 30.0%
ATACTAAGATAAGGAATGAC+AGG + Chr8:76652237-76652256 None:intergenic 30.0%
CATTTACTTGAAAATCAGTC+GGG - Chr8:76651877-76651896 MsG0880046678.01.T01:CDS 30.0%
CCATTTACTTGAAAATCAGT+CGG - Chr8:76651876-76651895 MsG0880046678.01.T01:CDS 30.0%
CTTACTTTCAACATAATGCT+TGG + Chr8:76652763-76652782 None:intergenic 30.0%
GATACAATTGGCATAAAAAC+TGG + Chr8:76652450-76652469 None:intergenic 30.0%
GTCATTCCTTATCTTAGTAT+TGG - Chr8:76652237-76652256 MsG0880046678.01.T01:CDS 30.0%
TTCATCAACACAGATACAAT+TGG + Chr8:76652462-76652481 None:intergenic 30.0%
! GCTTTTGTGAAGAAGATTTA+TGG + Chr8:76651783-76651802 None:intergenic 30.0%
!! TGAGTAATAGTAGTCTTGTT+TGG - Chr8:76652280-76652299 MsG0880046678.01.T01:CDS 30.0%
!!! TGTTACCGTTACACTTTTTT+GGG - Chr8:76652634-76652653 MsG0880046678.01.T01:CDS 30.0%
!!! TTGTTACCGTTACACTTTTT+TGG - Chr8:76652633-76652652 MsG0880046678.01.T01:CDS 30.0%
!!! TTGTTTTAGTCATTGTTCCA+AGG - Chr8:76652488-76652507 MsG0880046678.01.T01:CDS 30.0%
AACTTGATCAAAATCTCGAG+GGG + Chr8:76652427-76652446 None:intergenic 35.0%
AAGGAATGACAGGAAAACTT+TGG + Chr8:76652227-76652246 None:intergenic 35.0%
AAGTAAATGGTGTATGCTGA+GGG + Chr8:76651866-76651885 None:intergenic 35.0%
ATAATAGACGTTATCGGGAA+GGG + Chr8:76652310-76652329 None:intergenic 35.0%
ATCATACATTGATCAACGGT+TGG + Chr8:76652360-76652379 None:intergenic 35.0%
ATTTCACGTCAAGAAAGGAT+AGG + Chr8:76651684-76651703 None:intergenic 35.0%
CATCACATCAATGATCACTT+TGG - Chr8:76652600-76652619 MsG0880046678.01.T01:CDS 35.0%
CTTGGCAAAAAACCAATAGA+AGG + Chr8:76652745-76652764 None:intergenic 35.0%
GAACTTGATCAAAATCTCGA+GGG + Chr8:76652428-76652447 None:intergenic 35.0%
GAAGTTCCAATACCTTCTAT+TGG - Chr8:76652730-76652749 MsG0880046678.01.T01:CDS 35.0%
GTATATGTACGTCTAAGTCT+CGG - Chr8:76651599-76651618 MsG0880046678.01.T01:CDS 35.0%
TACTAATTACCGTATGACGA+TGG - Chr8:76651903-76651922 MsG0880046678.01.T01:CDS 35.0%
TTCATCCAACAATGATCTCA+TGG + Chr8:76652037-76652056 None:intergenic 35.0%
! AGATGCAAGTTGACGAATAA+AGG + Chr8:76651760-76651779 None:intergenic 35.0%
! CAAGTTGACGAATAAAGGAT+CGG + Chr8:76651755-76651774 None:intergenic 35.0%
! GAATCCCCAAAAAAGTGTAA+CGG + Chr8:76652642-76652661 None:intergenic 35.0%
!! CTTAGTATTGGTCTTAATGG+TGG - Chr8:76652249-76652268 MsG0880046678.01.T01:CDS 35.0%
!! TTTTGGGGATTCACTGATAT+TGG - Chr8:76652650-76652669 MsG0880046678.01.T01:CDS 35.0%
!!! CCGACTGATTTTCAAGTAAA+TGG + Chr8:76651879-76651898 None:intergenic 35.0%
!!! GTTACCGTTACACTTTTTTG+GGG - Chr8:76652635-76652654 MsG0880046678.01.T01:CDS 35.0%
AAACTCTCACGTCACTAAGA+CGG + Chr8:76652164-76652183 None:intergenic 40.0%
AAGCGATTTCACGTCAAGAA+AGG + Chr8:76651689-76651708 None:intergenic 40.0%
ACTTGATCAAAATCTCGAGG+GGG + Chr8:76652426-76652445 None:intergenic 40.0%
CAAGTAAATGGTGTATGCTG+AGG + Chr8:76651867-76651886 None:intergenic 40.0%
CATAATAGACGTTATCGGGA+AGG + Chr8:76652311-76652330 None:intergenic 40.0%
GGAACTTGATCAAAATCTCG+AGG + Chr8:76652429-76652448 None:intergenic 40.0%
GGCAACCACCTTATATTTGT+TGG + Chr8:76652139-76652158 None:intergenic 40.0%
GTCAAGAAAGGATAGGACTT+CGG + Chr8:76651677-76651696 None:intergenic 40.0%
GTGAATTGAGGATGTTGTTC+TGG + Chr8:76651841-76651860 None:intergenic 40.0%
TCAAATGTGTGAGCAAGTCA+TGG - Chr8:76651716-76651735 MsG0880046678.01.T01:CDS 40.0%
TGAGAATCTGAAAGAGTCAG+TGG + Chr8:76652097-76652116 None:intergenic 40.0%
! GACGTGAGAGTTTTCACTTT+GGG - Chr8:76652171-76652190 MsG0880046678.01.T01:CDS 40.0%
! TGACGTGAGAGTTTTCACTT+TGG - Chr8:76652170-76652189 MsG0880046678.01.T01:CDS 40.0%
!! AATTTCGAGTTGAAGCGTCT+TGG - Chr8:76652541-76652560 MsG0880046678.01.T01:CDS 40.0%
!! ACAGTTGTTGGTTCTTGCAA+TGG - Chr8:76651940-76651959 MsG0880046678.01.T01:CDS 40.0%
!! ACTTGTTGTCCATCGTCATA+CGG + Chr8:76651915-76651934 None:intergenic 40.0%
!! TGAGGATGTTGTTCTGGAAA+CGG + Chr8:76651835-76651854 None:intergenic 40.0%
!!! ACTCGTCAGTTTTGGAATCA+TGG + Chr8:76651981-76652000 None:intergenic 40.0%
ACTTCGGTGATGAGATCATC+CGG + Chr8:76651661-76651680 None:intergenic 45.0%
CCAACAATGATCTCATGGCT+GGG + Chr8:76652032-76652051 None:intergenic 45.0%
TCCAACAATGATCTCATGGC+TGG + Chr8:76652033-76652052 None:intergenic 45.0%
! GTCTCGATACTCGTCAGTTT+TGG + Chr8:76651989-76652008 None:intergenic 45.0%
ATGCTGAGGGCAGTGAATTG+AGG + Chr8:76651853-76651872 None:intergenic 50.0%
CCCAGCCATGAGATCATTGT+TGG - Chr8:76652029-76652048 MsG0880046678.01.T01:CDS 50.0%
GAGACTTCTCTCTCCGTTTC+TGG - Chr8:76652004-76652023 MsG0880046678.01.T01:CDS 50.0%
GGTGATGAGATCATCCGGAA+GGG + Chr8:76651656-76651675 None:intergenic 50.0%
TCATGGCTGGGTTCCAGAAA+CGG + Chr8:76652020-76652039 None:intergenic 50.0%
TCTCACGTCACTAAGACGGA+AGG + Chr8:76652160-76652179 None:intergenic 50.0%
AGATCATCCGGAAGGGTCAC+TGG + Chr8:76651649-76651668 None:intergenic 55.0%
CGGTGATGAGATCATCCGGA+AGG + Chr8:76651657-76651676 None:intergenic 55.0%
TCATCCGGAAGGGTCACTGG+CGG + Chr8:76651646-76651665 None:intergenic 60.0%
TTCGCCGCCAGTGACCCTTC+CGG - Chr8:76651639-76651658 MsG0880046678.01.T01:CDS 65.0%
AGGGTCACTGGCGGCGAAGG+AGG + Chr8:76651637-76651656 None:intergenic 70.0%
GGAAGGGTCACTGGCGGCGA+AGG + Chr8:76651640-76651659 None:intergenic 70.0%
GGGTCACTGGCGGCGAAGGA+GGG + Chr8:76651636-76651655 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 76651595 76652794 76651595 ID=MsG0880046678.01;Name=MsG0880046678.01
Chr8 mRNA 76651595 76652794 76651595 ID=MsG0880046678.01.T01;Parent=MsG0880046678.01;Name=MsG0880046678.01.T01;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|399
Chr8 exon 76651595 76652794 76651595 ID=MsG0880046678.01.T01:exon:32594;Parent=MsG0880046678.01.T01
Chr8 CDS 76651595 76652794 76651595 ID=MsG0880046678.01.T01:cds;Parent=MsG0880046678.01.T01
Gene Sequence

>MsG0880046678.01.T01

ATGGGTATATGTACGTCTAAGTCTCGGCGTGAAATCAACCCTCCTTCGCCGCCAGTGACCCTTCCGGATGATCTCATCACCGAAGTCCTATCCTTTCTTGACGTGAAATCGCTTGTACGTCTCAAATGTGTGAGCAAGTCATGGTACTCGCTCATCTCCGATCCTTTATTCGTCAACTTGCATCTCCATAAATCTTCTTCACAAAAGCCACACTTAACAGTATTTTATTCATATTTTCCGTTTCCAGAACAACATCCTCAATTCACTGCCCTCAGCATACACCATTTACTTGAAAATCAGTCGGGTATTACTAATTACCGTATGACGATGGACAACAAGTATTACACAGTTGTTGGTTCTTGCAATGGATTGCTTTGCTTGCTCCATGATTCCAAAACTGACGAGTATCGAGACTTCTCTCTCCGTTTCTGGAACCCAGCCATGAGATCATTGTTGGATGAACGAAGCTGCTTTATACGCATTTCATGCAGCAACAACTCCACTGACTCTTTCAGATTCTCATTTGCTTATGATAATTTAACCAACAAATATAAGGTGGTTGCCTTCCGTCTTAGTGACGTGAGAGTTTTCACTTTGGGCGATAAATATAATAATGTTTGGAGAAATATCCAAAGTTTTCCTGTCATTCCTTATCTTAGTATTGGTCTTAATGGTGGTGTCTATGTGAGTAATAGTAGTCTTGTTTGGTTTTCCCTTCCCGATAACGTCTATTATGATTATGATCAATGGGACAATTTTAATCCAACCGTTGATCAATGTATGATTATCTCACTTGATTTGGGAACAGAGACTTACACGCAATTGCTTCCCCCTCGAGATTTTGATCAAGTTCCAGTTTTTATGCCAATTGTATCTGTGTTGATGAATTGTCTTTGTTTTAGTCATTGTTCCAAGGAAAATTATTTTATTATGTGGCAAATGACAGAATTTCGAGTTGAAGCGTCTTGGACTAAATTGTTTAAATTTAGTTATCAAAATCTATATCATCACATCAATGATCACTTTGGATATCGTCATTTGTTACCGTTACACTTTTTTGGGGATTCACTGATATTGGCAAGCAATACACAACAAGTTGTTCTCTATAATAGGAGAGAAAATAAAGTAGATGCTAGAAGTTCCAATACCTTCTATTGGTTTTTTGCCAAGCATTATGTTGAAAGTAAGTTCCTCTTATGA
Protein sequence

>MsG0880046678.01.T01

MGICTSKSRREINPPSPPVTLPDDLITEVLSFLDVKSLVRLKCVSKSWYSLISDPLFVNLHLHKSSSQKPHLTVFYSYFPFPEQHPQFTALSIHHLLENQSGITNYRMTMDNKYYTVVGSCNGLLCLLHDSKTDEYRDFSLRFWNPAMRSLLDERSCFIRISCSNNSTDSFRFSFAYDNLTNKYKVVAFRLSDVRVFTLGDKYNNVWRNIQSFPVIPYLSIGLNGGVYVSNSSLVWFSLPDNVYYDYDQWDNFNPTVDQCMIISLDLGTETYTQLLPPRDFDQVPVFMPIVSVLMNCLCFSHCSKENYFIMWQMTEFRVEASWTKLFKFSYQNLYHHINDHFGYRHLLPLHFFGDSLILASNTQQVVLYNRRENKVDARSSNTFYWFFAKHYVESKFLL*