AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038413.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038413.01.T01 MTR_7g055830 76.398 322 48 3 1 294 18 339 2.19e-177 494
MsG0780038413.01.T01 MTR_7g055870 86.420 243 32 1 53 294 165 407 7.00e-155 439
MsG0780038413.01.T01 MTR_7g055870 94.545 55 3 0 1 55 18 72 7.28e-26 106
MsG0780038413.01.T01 MTR_7g055930 85.185 243 35 1 53 294 165 407 3.66e-153 435
MsG0780038413.01.T01 MTR_7g055930 90.909 55 5 0 1 55 18 72 4.94e-25 103
MsG0780038413.01.T01 MTR_7g056173 59.912 227 85 3 70 293 25 248 1.74e-87 265
MsG0780038413.01.T01 MTR_7g056200 47.143 350 110 10 3 293 30 363 9.65e-82 252
MsG0780038413.01.T01 MTR_6g065510 47.458 295 138 7 1 290 28 310 1.31e-78 242
MsG0780038413.01.T01 MTR_2g043410 51.515 231 95 5 69 291 175 396 3.44e-69 221
MsG0780038413.01.T01 MTR_2g043410 56.667 60 26 0 1 60 27 86 3.13e-12 67.0
MsG0780038413.01.T01 MTR_2g043400 53.712 229 90 6 71 291 177 397 1.44e-68 219
MsG0780038413.01.T01 MTR_2g043400 66.667 48 16 0 1 48 28 75 3.84e-11 63.5
MsG0780038413.01.T01 MTR_5g058620 50.431 232 97 7 70 293 31 252 4.60e-68 213
MsG0780038413.01.T01 MTR_1g058870 50.431 232 97 7 70 293 31 252 4.60e-68 213
MsG0780038413.01.T01 MTR_7g056003 52.489 221 92 5 74 287 168 382 2.88e-67 215
MsG0780038413.01.T01 MTR_7g056003 61.290 62 22 2 1 60 20 81 5.19e-12 66.2
MsG0780038413.01.T01 MTR_7g445890 40.341 352 137 11 3 292 23 363 2.16e-66 212
MsG0780038413.01.T01 MTR_7g055987 41.742 333 105 11 1 266 25 335 2.26e-66 212
MsG0780038413.01.T01 MTR_1g088120 38.583 381 136 10 1 295 15 383 3.33e-66 213
MsG0780038413.01.T01 MTR_2g006360 41.768 328 121 8 3 295 53 345 3.48e-66 211
MsG0780038413.01.T01 MTR_3g437520 51.111 225 106 3 70 292 183 405 4.27e-66 214
MsG0780038413.01.T01 MTR_3g437520 76.596 47 10 1 3 48 30 76 6.65e-14 72.0
MsG0780038413.01.T01 MTR_3g072470 53.275 229 92 7 70 291 176 396 4.73e-66 213
MsG0780038413.01.T01 MTR_3g072470 70.000 50 14 1 3 51 26 75 1.83e-13 70.5
MsG0780038413.01.T01 MTR_0464s0020 50.655 229 102 4 71 292 184 408 9.08e-65 209
MsG0780038413.01.T01 MTR_0464s0020 76.596 47 10 1 3 48 30 76 8.46e-14 71.6
MsG0780038413.01.T01 MTR_3g464470 36.667 360 147 7 3 293 14 361 8.52e-64 206
MsG0780038413.01.T01 MTR_3g464500 44.726 237 112 5 64 293 160 384 1.06e-63 206
MsG0780038413.01.T01 MTR_3g464500 58.000 50 21 0 3 52 34 83 1.27e-11 65.1
MsG0780038413.01.T01 MTR_7g056290 50.661 227 98 6 71 291 181 399 1.43e-63 206
MsG0780038413.01.T01 MTR_7g056290 69.231 52 15 1 1 51 27 78 1.33e-14 73.9
MsG0780038413.01.T01 MTR_6g055210 47.917 240 104 5 70 293 167 401 7.16e-63 205
MsG0780038413.01.T01 MTR_7g055953 50.000 226 95 7 66 289 84 293 1.28e-62 201
MsG0780038413.01.T01 MTR_7g055977 50.901 222 96 5 74 294 155 364 6.26e-62 201
MsG0780038413.01.T01 MTR_7g055977 63.830 47 17 0 3 49 14 60 2.89e-11 63.9
MsG0780038413.01.T01 MTR_7g056390 49.123 228 102 6 70 291 176 395 6.34e-62 202
MsG0780038413.01.T01 MTR_7g056390 74.000 50 12 1 3 51 25 74 3.94e-15 75.5
MsG0780038413.01.T01 MTR_4g031020 42.975 242 115 4 63 293 180 409 9.35e-61 199
MsG0780038413.01.T01 MTR_4g013180 48.918 231 105 7 70 295 153 375 1.56e-60 199
MsG0780038413.01.T01 MTR_4g013180 60.377 53 20 1 3 54 18 70 5.82e-12 66.2
MsG0780038413.01.T01 MTR_4g030830 46.522 230 101 6 72 291 155 372 2.32e-60 197
MsG0780038413.01.T01 MTR_7g060960 38.235 340 135 9 1 293 37 348 5.05e-60 195
MsG0780038413.01.T01 MTR_4g013175 48.458 227 101 6 72 290 175 393 9.83e-60 196
MsG0780038413.01.T01 MTR_7g070880 45.528 246 101 7 62 294 177 402 1.74e-59 196
MsG0780038413.01.T01 MTR_7g070880 53.846 52 24 0 1 52 26 77 9.06e-11 62.4
MsG0780038413.01.T01 MTR_4g013185 48.261 230 101 7 75 295 178 398 8.28e-59 194
MsG0780038413.01.T01 MTR_4g030980 41.909 241 117 4 64 293 181 409 1.22e-58 193
MsG0780038413.01.T01 MTR_7g078900 47.458 236 98 7 68 293 173 392 4.16e-58 192
MsG0780038413.01.T01 MTR_7g077970 44.758 248 112 8 57 293 158 391 6.70e-58 191
MsG0780038413.01.T01 MTR_7g077970 66.000 50 16 1 1 49 12 61 2.78e-11 63.9
MsG0780038413.01.T01 MTR_7g070830 45.082 244 105 7 62 294 177 402 6.75e-58 191
MsG0780038413.01.T01 MTR_7g070830 53.846 52 24 0 1 52 26 77 4.35e-11 63.5
MsG0780038413.01.T01 MTR_3g080370 44.186 258 106 6 60 293 156 399 6.93e-58 192
MsG0780038413.01.T01 MTR_3g080370 69.231 39 12 0 10 48 35 73 9.78e-11 62.4
MsG0780038413.01.T01 MTR_7g061060 47.556 225 91 5 74 293 167 369 1.45e-57 190
MsG0780038413.01.T01 MTR_7g056737 36.667 360 138 7 4 292 30 370 1.88e-57 190
MsG0780038413.01.T01 MTR_7g078840 47.345 226 109 4 70 290 179 399 2.11e-57 190
MsG0780038413.01.T01 MTR_7g078840 63.462 52 18 1 1 51 15 66 6.77e-11 62.8
MsG0780038413.01.T01 MTR_7g057270 44.167 240 115 6 62 293 167 395 2.55e-57 190
MsG0780038413.01.T01 MTR_7g057270 64.583 48 17 0 1 48 31 78 5.86e-13 68.9
MsG0780038413.01.T01 MTR_7g078860 49.561 228 97 7 72 293 164 379 3.55e-57 189
MsG0780038413.01.T01 MTR_7g078860 61.538 52 19 1 1 51 14 65 7.90e-11 62.4
MsG0780038413.01.T01 MTR_4g033495 47.556 225 102 3 67 291 179 387 3.68e-57 190
MsG0780038413.01.T01 MTR_7g061050 48.198 222 96 4 74 293 164 368 5.66e-57 188
MsG0780038413.01.T01 MTR_7g056170 51.528 229 69 6 70 292 248 440 1.04e-56 189
MsG0780038413.01.T01 MTR_7g056170 78.261 46 10 0 3 48 82 127 7.09e-16 77.8
MsG0780038413.01.T01 MTR_7g056717 36.740 362 139 6 1 291 27 369 1.12e-56 187
MsG0780038413.01.T01 MTR_5g068040 39.769 347 138 11 3 289 23 358 1.16e-56 187
MsG0780038413.01.T01 MTR_2g461450 36.000 350 146 9 3 293 25 355 1.17e-56 186
MsG0780038413.01.T01 MTR_5g069760 46.222 225 95 5 68 290 149 349 1.69e-56 186
MsG0780038413.01.T01 MTR_5g069760 61.224 49 19 0 1 49 11 59 1.41e-13 70.9
MsG0780038413.01.T01 MTR_5g043160 46.939 245 101 8 63 292 208 438 2.22e-56 188
MsG0780038413.01.T01 MTR_5g043160 65.957 47 16 0 3 49 57 103 3.40e-11 63.9
MsG0780038413.01.T01 MTR_7g079160 45.815 227 107 6 72 293 188 403 2.89e-56 189
MsG0780038413.01.T01 MTR_7g079160 54.945 91 25 5 1 88 13 90 1.20e-14 74.3
MsG0780038413.01.T01 MTR_7g056710 47.706 218 95 4 74 291 166 364 5.28e-56 185
MsG0780038413.01.T01 MTR_2g010920 44.490 245 116 7 58 293 173 406 5.81e-56 186
MsG0780038413.01.T01 MTR_2g010920 73.913 46 12 0 3 48 27 72 4.87e-15 75.1
MsG0780038413.01.T01 MTR_6g017305 45.217 230 108 7 71 292 43 262 7.21e-56 182
MsG0780038413.01.T01 MTR_7g078040 44.490 245 112 8 62 293 169 402 9.59e-56 186
MsG0780038413.01.T01 MTR_7g078040 65.306 49 16 1 1 48 14 62 6.58e-12 65.9
MsG0780038413.01.T01 MTR_5g056020 44.800 250 105 7 66 293 164 402 1.31e-55 187
MsG0780038413.01.T01 MTR_6g016285 44.922 256 103 6 60 291 156 397 1.53e-55 186
MsG0780038413.01.T01 MTR_6g016285 65.217 46 16 0 3 48 28 73 3.52e-12 66.6
MsG0780038413.01.T01 MTR_7g022670 39.748 317 143 12 1 287 28 326 2.75e-55 182
MsG0780038413.01.T01 MTR_7g061090 49.107 224 97 3 72 293 182 390 4.01e-55 184
MsG0780038413.01.T01 MTR_7g034310 48.636 220 87 6 71 290 16 209 4.99e-55 178
MsG0780038413.01.T01 MTR_8g066440 46.957 230 91 6 71 290 174 382 6.42e-55 183
MsG0780038413.01.T01 MTR_4g024890 44.978 229 103 6 71 291 151 364 1.17e-54 182
MsG0780038413.01.T01 MTR_7g078880 40.667 300 139 8 3 295 16 283 1.51e-54 182
MsG0780038413.01.T01 MTR_2g017720 41.554 296 119 10 33 295 9 283 2.36e-54 182
MsG0780038413.01.T01 MTR_7g009265 46.087 230 107 6 71 292 84 304 3.61e-54 179
MsG0780038413.01.T01 MTR_5g069930 47.297 222 92 7 72 290 157 356 4.14e-54 180
MsG0780038413.01.T01 MTR_5g069930 59.184 49 20 0 1 49 11 59 2.32e-12 67.0
MsG0780038413.01.T01 MTR_1g015740 37.048 332 119 9 3 293 15 297 6.46e-54 178
MsG0780038413.01.T01 MTR_3g013470 45.494 233 107 8 60 287 125 342 8.85e-54 179
MsG0780038413.01.T01 MTR_7g113500 41.736 242 127 6 57 293 131 363 1.01e-53 179
MsG0780038413.01.T01 MTR_7g077990 35.734 361 152 12 1 293 22 370 1.20e-53 180
MsG0780038413.01.T01 MTR_2g047892 35.342 365 146 10 1 291 27 375 1.28e-53 179
MsG0780038413.01.T01 MTR_2g010950 41.870 246 128 6 54 293 150 386 1.73e-53 179
MsG0780038413.01.T01 MTR_2g010950 76.087 46 11 0 3 48 27 72 1.50e-14 73.6
MsG0780038413.01.T01 MTR_7g060940 43.154 241 98 5 62 290 158 371 1.84e-53 179
MsG0780038413.01.T01 MTR_7g060940 62.000 50 19 0 1 50 27 76 2.03e-13 70.5
MsG0780038413.01.T01 MTR_0242s0060 42.259 239 119 6 62 292 161 388 2.07e-53 179
MsG0780038413.01.T01 MTR_0242s0060 68.627 51 14 1 1 49 14 64 1.86e-13 70.5
MsG0780038413.01.T01 MTR_0242s0040 42.259 239 119 6 62 292 161 388 2.07e-53 179
MsG0780038413.01.T01 MTR_0242s0040 68.627 51 14 1 1 49 14 64 1.86e-13 70.5
MsG0780038413.01.T01 MTR_4g034860 45.045 222 105 4 71 291 187 392 1.23e-52 177
MsG0780038413.01.T01 MTR_7g028660 42.259 239 98 5 65 291 149 359 1.49e-52 176
MsG0780038413.01.T01 MTR_7g028660 65.217 46 16 0 4 49 19 64 1.67e-11 64.7
MsG0780038413.01.T01 MTR_4g129190 46.186 236 105 10 67 292 148 371 3.19e-52 176
MsG0780038413.01.T01 MTR_7g077070 43.388 242 121 10 59 293 167 399 4.27e-52 176
MsG0780038413.01.T01 MTR_7g077070 60.000 55 21 1 1 54 21 75 7.20e-11 62.8
MsG0780038413.01.T01 MTR_4g008790 45.374 227 96 6 72 293 213 416 5.86e-52 177
MsG0780038413.01.T01 MTR_4g030790 39.785 279 110 10 1 236 24 287 8.76e-52 173
MsG0780038413.01.T01 MTR_4g019990 42.735 234 104 6 72 293 155 370 1.37e-51 174
MsG0780038413.01.T01 MTR_2g047200 45.536 224 97 7 70 289 170 372 2.00e-51 174
MsG0780038413.01.T01 MTR_2g047200 60.417 48 19 0 1 48 25 72 5.85e-12 65.9
MsG0780038413.01.T01 MTR_7g091630 41.667 252 113 6 57 286 166 405 2.30e-51 174
MsG0780038413.01.T01 MTR_7g091630 69.388 49 15 0 3 51 39 87 1.54e-15 76.6
MsG0780038413.01.T01 MTR_7g056503 42.424 231 106 4 70 293 169 379 2.65e-51 174
MsG0780038413.01.T01 MTR_1g442850 43.379 219 106 3 74 292 159 359 4.66e-51 172
MsG0780038413.01.T01 MTR_1g442850 62.000 50 19 0 1 50 10 59 7.25e-12 65.5
MsG0780038413.01.T01 MTR_7g056260 55.828 163 67 3 71 233 160 317 4.88e-51 171
MsG0780038413.01.T01 MTR_7g066100 39.431 246 117 5 58 295 155 376 1.67e-50 171
MsG0780038413.01.T01 MTR_6g017295 42.915 247 105 9 71 292 94 329 2.41e-50 174
MsG0780038413.01.T01 MTR_6g088385 43.644 236 94 6 72 289 82 296 8.22e-50 167
MsG0780038413.01.T01 MTR_7g062100 44.395 223 107 5 72 293 173 379 9.73e-50 169
MsG0780038413.01.T01 MTR_7g062100 56.452 62 22 2 3 62 31 89 3.48e-12 66.6
MsG0780038413.01.T01 MTR_0128s0070 34.921 378 135 12 1 293 27 378 2.11e-49 169
MsG0780038413.01.T01 MTR_4g030090 44.635 233 103 9 72 291 160 379 2.35e-49 169
MsG0780038413.01.T01 MTR_7g056820 44.444 225 100 6 74 293 154 358 3.14e-49 167
MsG0780038413.01.T01 MTR_7g091640 46.667 180 83 4 64 236 174 347 4.01e-49 167
MsG0780038413.01.T01 MTR_7g091640 62.069 58 18 2 3 60 42 95 5.47e-12 65.9
MsG0780038413.01.T01 MTR_0097s0030 44.749 219 97 5 68 286 158 352 4.02e-49 167
MsG0780038413.01.T01 MTR_2g047240 44.749 219 97 5 68 286 158 352 4.02e-49 167
MsG0780038413.01.T01 MTR_7g066030 42.373 236 115 4 58 290 165 382 4.83e-49 168
MsG0780038413.01.T01 MTR_7g066030 52.830 53 25 0 1 53 26 78 2.27e-12 67.4
MsG0780038413.01.T01 MTR_7g077910 45.378 238 110 8 67 293 82 310 5.12e-49 166
MsG0780038413.01.T01 MTR_6g017280 42.731 227 107 5 72 292 159 368 8.36e-49 167
MsG0780038413.01.T01 MTR_7g066000 43.644 236 101 7 67 292 169 382 1.27e-48 167
MsG0780038413.01.T01 MTR_7g066000 55.769 52 23 0 3 54 32 83 2.57e-11 63.9
MsG0780038413.01.T01 MTR_0128s0020 45.205 219 99 5 72 290 175 372 2.50e-48 166
MsG0780038413.01.T01 MTR_7g091610 45.198 177 91 2 113 288 52 223 2.90e-48 161
MsG0780038413.01.T01 MTR_0649s0020 41.975 243 126 6 54 293 139 369 6.52e-48 164
MsG0780038413.01.T01 MTR_0649s0020 66.667 48 16 0 1 48 16 63 3.60e-14 72.4
MsG0780038413.01.T01 MTR_0707s0020 42.917 240 88 7 72 289 209 421 1.28e-47 165
MsG0780038413.01.T01 MTR_0707s0020 62.500 48 18 0 1 48 31 78 8.96e-13 68.6
MsG0780038413.01.T01 MTR_1g015730 44.053 227 100 8 72 293 161 365 1.91e-47 163
MsG0780038413.01.T01 MTR_1g015730 59.649 57 20 1 3 56 16 72 2.95e-11 63.9
MsG0780038413.01.T01 MTR_2g010900 42.152 223 115 5 57 274 119 332 2.71e-47 163
MsG0780038413.01.T01 MTR_2g010900 79.412 34 7 0 15 48 2 35 4.67e-11 63.2
MsG0780038413.01.T01 MTR_7g062060 41.921 229 107 6 70 293 179 386 7.29e-47 162
MsG0780038413.01.T01 MTR_6g086920 41.935 248 101 7 72 293 221 451 1.10e-46 164
MsG0780038413.01.T01 MTR_6g086920 62.500 48 18 0 1 48 43 90 1.00e-12 68.6
MsG0780038413.01.T01 MTR_7g070900 37.000 300 107 9 1 288 186 415 1.30e-46 163
MsG0780038413.01.T01 MTR_7g070900 34.328 134 47 3 1 93 20 153 1.03e-13 71.6
MsG0780038413.01.T01 MTR_8g030630 49.189 185 78 5 110 293 72 241 1.92e-46 162
MsG0780038413.01.T01 MTR_8g030630 44.670 197 69 6 93 287 280 438 9.61e-44 155
MsG0780038413.01.T01 MTR_0128s0010 34.688 369 140 11 3 290 28 376 2.07e-46 160
MsG0780038413.01.T01 MTR_6g092560 42.739 241 97 8 71 293 160 377 3.41e-46 161
MsG0780038413.01.T01 MTR_7g066850 42.795 229 108 7 74 291 167 383 4.91e-46 161
MsG0780038413.01.T01 MTR_7g066850 56.604 53 23 0 3 55 30 82 2.03e-11 64.7
MsG0780038413.01.T01 MTR_7g052670 40.244 246 104 7 71 292 179 405 5.87e-46 160
MsG0780038413.01.T01 MTR_4g129160 44.444 225 89 9 60 269 157 360 7.63e-46 158
MsG0780038413.01.T01 MTR_7g050480 40.343 233 117 5 62 293 159 370 1.98e-45 158
MsG0780038413.01.T01 MTR_7g056570 42.661 218 107 4 74 291 167 366 2.41e-45 159
MsG0780038413.01.T01 MTR_7g078960 42.041 245 112 10 57 293 35 257 2.82e-45 155
MsG0780038413.01.T01 MTR_7g050520 41.629 221 107 5 74 293 171 370 4.60e-45 157
MsG0780038413.01.T01 MTR_6g042600 40.594 303 124 12 3 291 43 303 1.06e-44 156
MsG0780038413.01.T01 MTR_7g061940 44.976 209 94 5 74 282 79 266 1.74e-44 152
MsG0780038413.01.T01 MTR_4g030110 41.322 242 103 6 63 294 167 379 2.28e-44 155
MsG0780038413.01.T01 MTR_7g052150 40.455 220 118 3 74 293 173 379 2.63e-44 155
MsG0780038413.01.T01 MTR_7g052150 60.417 48 19 0 1 48 27 74 2.66e-12 67.0
MsG0780038413.01.T01 MTR_2g047895 40.444 225 108 7 71 293 92 292 5.15e-44 153
MsG0780038413.01.T01 MTR_7g022600 43.038 237 105 9 70 290 178 400 8.54e-44 154
MsG0780038413.01.T01 MTR_7g022600 61.224 49 19 0 1 49 28 76 1.18e-12 68.2
MsG0780038413.01.T01 MTR_7g066840 42.081 221 112 5 74 291 169 376 1.74e-43 153
MsG0780038413.01.T01 MTR_7g066840 56.000 50 22 0 3 52 30 79 5.43e-11 63.2
MsG0780038413.01.T01 MTR_7g066080 42.105 247 104 9 72 294 169 400 3.86e-43 153
MsG0780038413.01.T01 MTR_5g096710 42.609 230 105 7 72 294 172 381 3.87e-43 152
MsG0780038413.01.T01 MTR_4g037465 40.000 235 117 6 64 292 159 375 6.97e-43 151
MsG0780038413.01.T01 MTR_7g035295 40.265 226 95 4 71 292 171 360 8.57e-43 151
MsG0780038413.01.T01 MTR_7g035295 76.596 47 10 1 3 48 23 69 9.33e-15 74.3
MsG0780038413.01.T01 MTR_7g066060 41.277 235 102 7 72 292 178 390 9.84e-43 153
MsG0780038413.01.T01 MTR_1g112010 41.256 223 84 5 71 287 119 300 1.12e-42 149
MsG0780038413.01.T01 MTR_1g029650 40.254 236 105 8 70 293 163 374 1.63e-42 150
MsG0780038413.01.T01 MTR_1g029650 63.265 49 18 0 1 49 13 61 9.80e-12 65.5
MsG0780038413.01.T01 MTR_2g027820 34.932 292 163 6 15 293 2 279 1.72e-42 148
MsG0780038413.01.T01 MTR_7g061010 41.518 224 101 6 74 293 171 368 1.95e-42 150
MsG0780038413.01.T01 MTR_7g061010 52.459 61 28 1 1 61 27 86 1.74e-11 64.7
MsG0780038413.01.T01 MTR_4g128320 38.983 236 102 7 60 290 59 257 2.70e-42 147
MsG0780038413.01.T01 MTR_4g006350 39.301 229 114 6 74 291 640 854 3.49e-42 155
MsG0780038413.01.T01 MTR_7g056760 40.693 231 99 8 70 286 173 379 2.08e-41 148
MsG0780038413.01.T01 MTR_7g056760 64.000 50 17 1 1 49 28 77 5.24e-11 63.2
MsG0780038413.01.T01 MTR_1g071010 38.462 234 111 6 70 293 158 368 3.28e-41 147
MsG0780038413.01.T01 MTR_6g081280 38.866 247 114 8 44 286 2 215 3.99e-41 143
MsG0780038413.01.T01 MTR_2g010935 39.035 228 99 6 72 293 38 231 1.01e-40 142
MsG0780038413.01.T01 MTR_4g011660 37.398 246 119 6 70 294 169 400 1.17e-40 146
MsG0780038413.01.T01 MTR_0128s0110 39.901 203 101 4 94 293 2 186 5.08e-40 139
MsG0780038413.01.T01 MTR_7g006360 36.519 293 138 8 1 292 14 259 8.40e-40 141
MsG0780038413.01.T01 MTR_4g020000 40.708 226 107 4 70 286 111 318 9.22e-40 142
MsG0780038413.01.T01 MTR_2g047878 38.696 230 99 6 64 293 158 345 1.80e-39 142
MsG0780038413.01.T01 MTR_0267s0050 36.864 236 121 4 65 293 152 366 8.98e-39 140
MsG0780038413.01.T01 MTR_3g013950 35.593 236 124 4 65 293 154 368 1.08e-36 135
MsG0780038413.01.T01 MTR_7g066010 35.165 273 113 7 21 290 139 350 2.22e-36 134
MsG0780038413.01.T01 MTR_7g066010 55.769 52 23 0 1 52 26 77 4.81e-12 66.2
MsG0780038413.01.T01 MTR_7g058630 44.937 158 74 4 138 294 17 162 6.35e-36 127
MsG0780038413.01.T01 MTR_7g445750 44.872 156 71 4 74 222 184 331 9.06e-36 131
MsG0780038413.01.T01 MTR_7g445750 47.541 61 31 1 1 61 28 87 1.97e-11 63.9
MsG0780038413.01.T01 MTR_5g069950 35.656 244 107 7 1 242 11 206 2.78e-35 127
MsG0780038413.01.T01 MTR_4g024910 34.276 283 145 9 15 293 2 247 1.04e-33 125
MsG0780038413.01.T01 MTR_4g030760 37.118 229 107 8 72 293 213 411 2.13e-33 127
MsG0780038413.01.T01 MTR_7g056797 37.778 225 112 9 70 286 173 377 2.76e-33 126
MsG0780038413.01.T01 MTR_7g061100 38.182 220 89 4 3 185 20 229 6.56e-33 123
MsG0780038413.01.T01 MTR_2g060555 39.462 223 93 9 66 287 81 262 1.02e-32 122
MsG0780038413.01.T01 MTR_7g056023 48.276 145 64 5 74 215 142 278 1.34e-32 121
MsG0780038413.01.T01 MTR_7g070937 50.758 132 54 3 70 193 10 138 2.38e-32 117
MsG0780038413.01.T01 MTR_8g101940 37.037 243 116 9 60 293 135 349 1.90e-31 120
MsG0780038413.01.T01 MTR_2g437110 34.310 239 97 8 71 292 178 373 6.92e-31 120
MsG0780038413.01.T01 MTR_1g047490 39.053 169 67 3 70 235 173 308 9.39e-30 115
MsG0780038413.01.T01 MTR_1g047490 61.224 49 19 0 1 49 27 75 3.95e-13 68.9
MsG0780038413.01.T01 MTR_7g056793 33.043 230 90 6 68 293 44 213 1.98e-29 112
MsG0780038413.01.T01 MTR_5g011350 44.444 144 62 4 70 212 120 246 2.51e-29 112
MsG0780038413.01.T01 MTR_7g070440 39.011 182 80 7 72 239 149 313 1.87e-28 112
MsG0780038413.01.T01 MTR_7g078940 43.836 146 72 4 57 197 194 334 2.33e-28 112
MsG0780038413.01.T01 MTR_7g066040 48.031 127 54 3 62 179 74 197 9.62e-28 108
MsG0780038413.01.T01 MTR_3g011020 29.773 309 123 11 1 241 33 315 3.84e-27 108
MsG0780038413.01.T01 MTR_2g021150 33.184 223 104 8 72 286 158 343 4.64e-27 108
MsG0780038413.01.T01 MTR_7g089830 44.681 141 60 2 131 271 7 129 6.71e-27 103
MsG0780038413.01.T01 MTR_7g055850 94.545 55 3 0 1 55 18 72 7.05e-27 106
MsG0780038413.01.T01 MTR_7g055850 74.419 43 10 1 53 94 165 207 9.77e-14 70.5
MsG0780038413.01.T01 MTR_4g108820 31.636 275 123 10 3 239 49 296 1.94e-26 106
MsG0780038413.01.T01 MTR_7g445580 45.690 116 52 2 176 291 42 146 2.76e-26 101
MsG0780038413.01.T01 MTR_3g083660 32.766 235 104 8 1 233 30 212 2.94e-26 105
MsG0780038413.01.T01 MTR_6g017270 53.846 104 44 2 191 292 220 321 6.82e-26 105
MsG0780038413.01.T01 MTR_2g021190 28.763 372 145 15 1 294 26 355 1.13e-25 105
MsG0780038413.01.T01 MTR_1g094210 28.116 345 143 12 4 282 65 370 3.94e-25 103
MsG0780038413.01.T01 MTR_1g094210 28.116 345 143 12 4 282 65 370 4.63e-25 103
MsG0780038413.01.T01 MTR_5g022420 29.023 348 148 15 4 288 35 346 6.34e-25 103
MsG0780038413.01.T01 MTR_3g055000 40.800 125 53 2 167 290 1 105 6.39e-24 94.7
MsG0780038413.01.T01 MTR_1g058190 31.228 285 122 15 3 233 42 306 1.15e-23 99.4
MsG0780038413.01.T01 MTR_3g036335 28.382 377 145 16 1 295 46 379 2.76e-23 99.0
MsG0780038413.01.T01 MTR_2g029990 33.333 231 106 10 72 293 193 384 3.45e-23 98.6
MsG0780038413.01.T01 MTR_1g097560 30.180 222 104 9 72 287 175 351 6.14e-23 97.4
MsG0780038413.01.T01 MTR_1g050542 35.503 169 81 5 74 236 194 340 1.19e-22 97.1
MsG0780038413.01.T01 MTR_3g036430 29.452 292 122 10 1 243 25 281 1.49e-22 95.9
MsG0780038413.01.T01 MTR_1g097330 31.441 229 113 8 74 293 154 347 1.74e-22 96.7
MsG0780038413.01.T01 MTR_3g030320 32.850 207 97 9 72 274 90 258 1.03e-21 93.2
MsG0780038413.01.T01 MTR_7g021580 29.605 304 139 12 3 291 40 283 1.03e-21 93.2
MsG0780038413.01.T01 MTR_7g062070 42.969 128 62 4 170 293 75 195 2.76e-21 89.7
MsG0780038413.01.T01 MTR_3g009240 30.225 311 106 13 1 233 41 318 3.61e-21 92.8
MsG0780038413.01.T01 MTR_2g046920 31.915 235 114 11 63 287 153 351 9.92e-21 91.3
MsG0780038413.01.T01 MTR_4g053470 28.710 310 140 11 3 271 29 298 1.22e-20 90.5
MsG0780038413.01.T01 MTR_2g046860 31.276 243 124 10 63 294 41 251 1.62e-20 90.1
MsG0780038413.01.T01 MTR_3g055070 41.322 121 49 3 167 286 1 100 1.65e-20 86.7
MsG0780038413.01.T01 MTR_3g007360 31.120 241 118 9 65 294 187 390 2.57e-20 90.5
MsG0780038413.01.T01 MTR_4g030880 35.122 205 80 8 90 293 45 197 3.23e-19 87.8
MsG0780038413.01.T01 MTR_0354s0030 54.545 77 34 1 216 292 1 76 3.68e-19 80.9
MsG0780038413.01.T01 MTR_3g010520 29.110 292 115 9 1 231 30 290 4.10e-19 86.7
MsG0780038413.01.T01 MTR_2g046900 30.864 243 124 9 63 292 157 368 4.23e-19 87.0
MsG0780038413.01.T01 MTR_2g047832 32.727 220 126 9 74 287 173 376 4.65e-19 87.0
MsG0780038413.01.T01 MTR_3g007410 30.705 241 119 9 65 294 187 390 5.15e-19 86.7
MsG0780038413.01.T01 MTR_6g065980 35.028 177 81 7 57 231 142 286 5.94e-19 86.3
MsG0780038413.01.T01 MTR_4g061340 35.326 184 73 7 67 233 163 317 8.35e-19 85.9
MsG0780038413.01.T01 MTR_6g048150 51.765 85 28 2 213 292 13 89 1.04e-18 80.9
MsG0780038413.01.T01 MTR_2g021155 29.646 226 111 8 72 286 173 361 1.94e-18 85.9
MsG0780038413.01.T01 MTR_2g021155 28.289 304 163 12 3 294 678 938 5.42e-17 81.6
MsG0780038413.01.T01 MTR_1g054575 33.929 168 84 5 74 236 191 336 2.39e-18 85.5
MsG0780038413.01.T01 MTR_0044s0300 36.527 167 74 7 72 233 182 321 4.31e-18 84.0
MsG0780038413.01.T01 MTR_3g010590 34.104 173 83 6 70 241 179 321 5.53e-18 83.6
MsG0780038413.01.T01 MTR_8g069515 66.038 53 18 0 1 53 21 73 5.76e-18 80.5
MsG0780038413.01.T01 MTR_5g057710 26.623 308 125 10 1 233 51 332 6.09e-18 83.6
MsG0780038413.01.T01 MTR_6g007135 33.617 235 116 14 65 291 167 369 6.31e-18 83.6
MsG0780038413.01.T01 MTR_3g024110 35.928 167 77 6 74 237 244 383 6.98e-18 83.6
MsG0780038413.01.T01 MTR_1g046600 33.333 270 137 11 21 282 72 306 7.68e-18 82.4
MsG0780038413.01.T01 MTR_5g046300 35.329 167 74 7 74 233 146 285 9.43e-18 82.8
MsG0780038413.01.T01 MTR_5g046290 35.329 167 74 7 74 233 146 285 9.43e-18 82.8
MsG0780038413.01.T01 MTR_1g097510 31.313 198 91 10 98 289 91 249 1.14e-17 81.6
MsG0780038413.01.T01 MTR_7g013590 31.169 231 114 12 75 294 177 373 1.90e-17 82.4
MsG0780038413.01.T01 MTR_1g097490 29.730 222 104 7 74 287 190 367 3.02e-17 81.6
MsG0780038413.01.T01 MTR_3g024040 26.299 308 127 10 2 240 37 313 3.08e-17 81.3
MsG0780038413.01.T01 MTR_5g057690 27.184 309 132 11 1 244 51 331 3.95e-17 81.3
MsG0780038413.01.T01 MTR_8g054320 30.488 246 129 9 1 240 37 246 4.02e-17 80.1
MsG0780038413.01.T01 MTR_3g010870 29.832 238 128 8 1 231 42 247 4.28e-17 80.5
MsG0780038413.01.T01 MTR_3g010440 29.365 252 144 9 3 241 33 263 4.40e-17 80.5
MsG0780038413.01.T01 MTR_6g027910 32.275 189 86 7 60 235 155 314 4.85e-17 80.9
MsG0780038413.01.T01 MTR_4g089125 62.264 53 20 0 1 53 17 69 5.05e-17 75.1
MsG0780038413.01.T01 MTR_3g007300 28.966 290 122 14 1 240 54 309 5.10e-17 80.9
MsG0780038413.01.T01 MTR_2g078850 27.922 308 120 12 1 233 35 315 5.10e-17 80.9
MsG0780038413.01.T01 MTR_1g097370 29.204 226 119 11 74 286 136 333 5.51e-17 81.3
MsG0780038413.01.T01 MTR_4g023130 27.547 265 140 9 3 241 16 254 6.51e-17 79.7
MsG0780038413.01.T01 MTR_5g046280 34.146 164 80 6 74 233 49 188 7.07e-17 79.0
MsG0780038413.01.T01 MTR_2g078900 34.132 167 79 7 72 233 175 315 8.11e-17 80.1
MsG0780038413.01.T01 MTR_3g007330 31.551 187 84 8 62 237 180 333 9.61e-17 80.1
MsG0780038413.01.T01 MTR_1g016960 48.235 85 41 1 209 293 153 234 1.17e-16 78.2
MsG0780038413.01.T01 MTR_3g014540 31.667 180 83 7 72 237 168 321 1.26e-16 79.7
MsG0780038413.01.T01 MTR_3g036290 35.119 168 78 8 72 237 161 299 1.30e-16 79.3
MsG0780038413.01.T01 MTR_3g006640 30.481 187 88 8 72 235 57 224 1.37e-16 78.6
MsG0780038413.01.T01 MTR_5g057790 26.332 319 132 13 1 244 51 341 1.54e-16 79.7
MsG0780038413.01.T01 MTR_7g056560 33.721 172 87 4 15 186 37 181 1.69e-16 76.6
MsG0780038413.01.T01 MTR_5g046260 26.481 287 117 10 1 233 9 255 1.77e-16 78.6
MsG0780038413.01.T01 MTR_0760s0010 39.645 169 66 10 72 234 187 325 1.99e-16 79.3
MsG0780038413.01.T01 MTR_6g027890 32.086 187 87 9 60 233 103 262 2.32e-16 78.6
MsG0780038413.01.T01 MTR_3g006530 30.693 202 96 7 71 269 193 353 2.87e-16 79.0
MsG0780038413.01.T01 MTR_3g010920 34.286 175 76 7 57 231 175 310 3.78e-16 78.2
MsG0780038413.01.T01 MTR_5g011200 33.333 168 80 9 72 231 162 305 4.11e-16 78.2
MsG0780038413.01.T01 MTR_1g054725 32.222 180 79 9 71 233 159 312 5.15e-16 77.8
MsG0780038413.01.T01 MTR_1004s0010 39.645 169 66 10 72 234 157 295 5.41e-16 77.8
MsG0780038413.01.T01 MTR_5g057020 27.303 304 133 11 1 244 51 326 7.30e-16 77.0
MsG0780038413.01.T01 MTR_3g024150 33.750 160 79 5 74 231 182 316 9.87e-16 77.0
MsG0780038413.01.T01 MTR_7g058660 42.529 87 50 0 200 286 103 189 1.09e-15 74.7
MsG0780038413.01.T01 MTR_3g009260 34.706 170 75 7 72 233 179 320 1.18e-15 77.0
MsG0780038413.01.T01 MTR_3g007270 32.086 187 85 9 61 237 195 349 1.21e-15 77.0
MsG0780038413.01.T01 MTR_1g055375 31.944 216 95 12 72 274 150 326 1.37e-15 76.6
MsG0780038413.01.T01 MTR_2g046830 30.594 219 112 9 74 287 169 352 1.74e-15 76.6
MsG0780038413.01.T01 MTR_3g009310 33.529 170 75 7 72 232 187 327 2.73e-15 75.9
MsG0780038413.01.T01 MTR_3g009300 32.812 192 85 9 62 242 141 299 2.94e-15 75.5
MsG0780038413.01.T01 MTR_1g115160 30.303 231 114 10 72 294 158 349 2.99e-15 75.5
MsG0780038413.01.T01 MTR_7g407070 33.702 181 81 9 74 237 185 343 3.74e-15 75.5
MsG0780038413.01.T01 MTR_2g046800 28.182 220 115 9 74 287 186 368 4.32e-15 75.1
MsG0780038413.01.T01 MTR_3g024130 33.155 187 77 9 72 241 105 260 5.45e-15 74.3
MsG0780038413.01.T01 MTR_3g030250 34.395 157 70 7 74 228 182 307 5.68e-15 74.7
MsG0780038413.01.T01 MTR_3g030240 33.544 158 71 5 74 231 185 308 5.79e-15 74.7
MsG0780038413.01.T01 MTR_4g031770 32.022 178 78 9 74 233 139 291 8.30e-15 74.3
MsG0780038413.01.T01 MTR_3g011100 32.143 196 85 8 68 246 376 540 9.41e-15 74.7
MsG0780038413.01.T01 MTR_3g013740 32.620 187 77 10 72 239 194 350 9.80e-15 74.3
MsG0780038413.01.T01 MTR_7g007300 31.000 200 98 10 41 233 214 380 1.39e-14 73.9
MsG0780038413.01.T01 MTR_2g043420 62.745 51 19 0 1 51 31 81 1.90e-14 70.1
MsG0780038413.01.T01 MTR_1g113900 34.375 160 78 6 76 233 45 179 2.07e-14 71.6
MsG0780038413.01.T01 MTR_3g006570 31.667 180 81 7 64 233 160 307 2.28e-14 73.2
MsG0780038413.01.T01 MTR_3g011060 31.720 186 78 9 67 233 171 326 2.84e-14 72.8
MsG0780038413.01.T01 MTR_3g436150 30.601 183 81 8 74 238 184 338 4.27e-14 72.4
MsG0780038413.01.T01 MTR_4g053510 58.491 53 22 0 3 55 29 81 4.53e-14 68.2
MsG0780038413.01.T01 MTR_3g030330 34.810 158 78 6 74 231 164 296 4.69e-14 72.0
MsG0780038413.01.T01 MTR_3g006670 29.787 188 84 9 72 242 191 347 4.74e-14 72.4
MsG0780038413.01.T01 MTR_6g460450 61.538 52 20 0 1 52 34 85 5.10e-14 68.6
MsG0780038413.01.T01 MTR_2g055970 29.680 219 114 9 74 286 351 535 5.11e-14 72.4
MsG0780038413.01.T01 MTR_4g055060 30.387 181 90 7 72 241 176 331 7.75e-14 71.6
MsG0780038413.01.T01 MTR_3g030310 32.530 166 81 7 71 233 175 312 9.05e-14 71.2
MsG0780038413.01.T01 MTR_8g101580 27.679 224 114 8 74 287 186 371 9.89e-14 71.2
MsG0780038413.01.T01 MTR_3g007430 31.148 183 86 7 64 234 177 331 1.02e-13 71.2
MsG0780038413.01.T01 MTR_3g007390 31.792 173 78 7 72 232 2 146 1.06e-13 68.9
MsG0780038413.01.T01 MTR_3g014570 31.694 183 79 8 72 237 168 321 1.12e-13 70.9
MsG0780038413.01.T01 MTR_7g056373 60.784 51 20 0 1 51 27 77 1.16e-13 67.0
MsG0780038413.01.T01 MTR_3g013770 30.500 200 86 9 61 237 160 329 1.40e-13 70.9
MsG0780038413.01.T01 MTR_4g107820 28.829 222 112 11 74 288 179 361 1.57e-13 70.9
MsG0780038413.01.T01 MTR_4g107780 28.829 222 112 11 74 288 179 361 1.61e-13 70.9
MsG0780038413.01.T01 MTR_4g107820 28.829 222 112 11 74 288 179 361 1.81e-13 70.5
MsG0780038413.01.T01 MTR_4g107780 28.829 222 112 11 74 288 179 361 1.81e-13 70.5
MsG0780038413.01.T01 MTR_3g083640 31.325 166 81 6 72 233 200 336 2.06e-13 70.5
MsG0780038413.01.T01 MTR_7g060930 42.647 68 39 0 152 219 11 78 2.34e-13 64.7
MsG0780038413.01.T01 MTR_6g004660 32.558 172 82 8 75 235 170 318 2.66e-13 70.1
MsG0780038413.01.T01 MTR_7g078050 66.000 50 16 1 1 49 11 60 2.77e-13 68.6
MsG0780038413.01.T01 MTR_3g010870 33.544 158 80 5 74 231 183 315 3.34e-13 69.7
MsG0780038413.01.T01 MTR_8g433030 29.297 256 136 11 3 239 47 276 5.64e-13 68.6
MsG0780038413.01.T01 MTR_3g006500 32.484 157 75 6 74 228 170 297 5.73e-13 68.9
MsG0780038413.01.T01 MTR_3g096280 33.129 163 57 6 74 231 157 272 5.93e-13 68.6
MsG0780038413.01.T01 MTR_1g058760 50.820 61 27 1 3 60 18 78 6.59e-13 63.5
MsG0780038413.01.T01 MTR_3g030350 32.727 165 83 6 74 233 177 318 1.13e-12 68.2
MsG0780038413.01.T01 MTR_8g467140 31.548 168 90 7 74 235 172 320 1.15e-12 67.8
MsG0780038413.01.T01 MTR_6g013270 30.409 171 90 7 67 231 171 318 1.27e-12 68.2
MsG0780038413.01.T01 MTR_3g010970 33.540 161 69 7 74 231 195 320 1.27e-12 67.8
MsG0780038413.01.T01 MTR_1g055065 30.114 176 82 8 72 231 68 218 1.96e-12 66.6
MsG0780038413.01.T01 MTR_8g062660 34.969 163 65 8 72 225 179 309 2.50e-12 67.4
MsG0780038413.01.T01 MTR_6g007150 31.034 174 91 8 64 229 111 263 2.90e-12 66.6
MsG0780038413.01.T01 MTR_3g010390 31.111 180 91 6 67 232 176 336 3.47e-12 66.6
MsG0780038413.01.T01 MTR_3g010620 32.500 160 71 6 74 231 181 305 4.21e-12 66.2
MsG0780038413.01.T01 MTR_2g010930 69.767 43 13 0 1 43 175 217 4.23e-12 64.7
MsG0780038413.01.T01 MTR_2g021210 28.194 227 117 10 74 294 221 407 4.63e-12 66.2
MsG0780038413.01.T01 MTR_2g028160 28.774 212 102 9 74 270 166 343 5.27e-12 66.2
MsG0780038413.01.T01 MTR_2g021252 27.542 236 103 11 72 294 187 367 8.36e-12 65.5
MsG0780038413.01.T01 MTR_7g445570 42.308 78 38 2 74 144 12 89 8.84e-12 60.8
MsG0780038413.01.T01 MTR_6g014720 30.000 170 91 6 67 231 154 300 9.99e-12 65.1
MsG0780038413.01.T01 MTR_7g077930 56.000 50 21 1 1 49 24 73 1.44e-11 60.5
MsG0780038413.01.T01 MTR_7g037670 40.833 120 43 7 70 180 151 251 1.71e-11 64.3
MsG0780038413.01.T01 MTR_3g023930 31.677 161 72 6 74 231 173 298 1.81e-11 64.3
MsG0780038413.01.T01 MTR_2g026010 25.778 225 123 8 65 274 132 327 2.13e-11 64.3
MsG0780038413.01.T01 MTR_3g010880 28.692 237 153 10 3 231 43 271 2.13e-11 63.9
MsG0780038413.01.T01 MTR_4g023080 27.647 170 100 6 74 241 147 295 2.47e-11 63.9
MsG0780038413.01.T01 MTR_6g053260 32.584 178 71 10 72 233 482 626 2.62e-11 64.3
MsG0780038413.01.T01 MTR_2g024110 25.822 213 107 10 74 270 142 319 2.66e-11 63.9
MsG0780038413.01.T01 MTR_5g056990 30.539 167 83 7 74 233 37 177 4.68e-11 62.0
MsG0780038413.01.T01 MTR_2g028130 26.667 210 107 11 74 270 166 341 5.17e-11 63.2
MsG0780038413.01.T01 MTR_2g021050 25.434 173 94 6 74 231 133 285 7.02e-11 62.8
MsG0780038413.01.T01 MTR_4g024870 60.870 46 18 0 3 48 51 96 7.87e-11 62.8
MsG0780038413.01.T01 MTR_2g028140 27.119 177 93 6 74 235 170 325 8.06e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 65 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATGCACGTTGGCGGTTT+TGG 0.179462 7:-46313767 MsG0780038413.01.T01:CDS
ATATGGCAGATGAAGGAATT+TGG 0.302672 7:-46313327 MsG0780038413.01.T01:CDS
AGAAAGACATAAAGGGAATA+AGG 0.315212 7:+46313200 None:intergenic
ACTCATCTGGGTATTAATTC+TGG 0.316600 7:-46313591 MsG0780038413.01.T01:CDS
ATTGACTACTATGGAAATAA+TGG 0.317757 7:-46313252 MsG0780038413.01.T01:CDS
AATTAATACCCAGATGAGTA+TGG 0.331789 7:+46313595 None:intergenic
GCCCACTCTAGCTTTCTTGA+TGG 0.335040 7:-46313394 MsG0780038413.01.T01:CDS
TCAATTTGGGCAATAATGTT+TGG 0.349822 7:-46313671 MsG0780038413.01.T01:CDS
GAATGGTGATACACTAATAT+TGG 0.350026 7:-46313175 MsG0780038413.01.T01:CDS
CACTAGTCCCCATACTCATC+TGG 0.351004 7:-46313604 MsG0780038413.01.T01:CDS
TGTTTCTTGCTGATCGCTTA+AGG 0.355257 7:+46314142 None:intergenic
CCTTTATGTCTTTCTGAGAA+TGG 0.363652 7:-46313192 MsG0780038413.01.T01:CDS
TTATTTCCATAGTAGTCAAT+AGG 0.398693 7:+46313255 None:intergenic
CTAGTGGAAATATCCATAAA+AGG 0.400537 7:+46313621 None:intergenic
AGTCTTCCTATTGACTACTA+TGG 0.401974 7:-46313261 MsG0780038413.01.T01:CDS
ATGGGACCCATCTTATCATA+TGG 0.411433 7:-46313344 MsG0780038413.01.T01:CDS
CCATTCTCAGAAAGACATAA+AGG 0.415471 7:+46313192 None:intergenic
TACACTAATATTGGCATTTG+AGG 0.428456 7:-46313166 MsG0780038413.01.T01:CDS
ATGTGAGTGGCACCGTTAAC+TGG 0.429890 7:-46313563 MsG0780038413.01.T01:CDS
CAAGGGAGATGATCACAAAT+TGG 0.432967 7:+46313484 None:intergenic
ACTTCACGTCAAGGAATGAT+AGG 0.435037 7:+46314238 None:intergenic
TCATCTGCCATATGATAAGA+TGG 0.460651 7:+46313337 None:intergenic
GTGCCCATGTGAATTTGAAT+TGG 0.467064 7:-46313523 MsG0780038413.01.T01:CDS
AATTTGGAGTTGACGAGTCA+TGG 0.469396 7:-46313311 MsG0780038413.01.T01:CDS
CATCATCATAAATTAATGTA+AGG 0.470652 7:+46314115 None:intergenic
ATCTCTCAAGTTATAGAGAA+TGG 0.471944 7:+46313131 None:intergenic
AGGTGGAGTTTGATGAATGT+AGG 0.481760 7:+46314162 None:intergenic
CATTCTCAGAAAGACATAAA+GGG 0.491399 7:+46313193 None:intergenic
ATGTCTCCGTACTCAAATCA+AGG 0.495570 7:+46313466 None:intergenic
GTTATAGAGAATGGCCGAGT+TGG 0.503885 7:+46313140 None:intergenic
AATTAACGATTATAAGATTG+TGG 0.508993 7:-46313727 MsG0780038413.01.T01:CDS
TCGAATGGCTAACCAGTTAA+CGG 0.509166 7:+46313551 None:intergenic
GGTGGAGTTTGATGAATGTA+GGG 0.513712 7:+46314163 None:intergenic
GGGAATAAGGACAGCGGACA+AGG 0.523633 7:+46313213 None:intergenic
TATAACTTGAGAGATAATAG+AGG 0.524653 7:-46313123 MsG0780038413.01.T01:CDS
AATCAATTTCTACTCCCTCA+TGG 0.527248 7:-46313441 MsG0780038413.01.T01:CDS
AGTAGTCAATAGGAAGACTT+TGG 0.529933 7:+46313265 None:intergenic
GGCATTTGAGGAAGCCAACT+CGG 0.532638 7:-46313154 MsG0780038413.01.T01:CDS
CATCTCCCTTGATTTGAGTA+CGG 0.540304 7:-46313472 MsG0780038413.01.T01:CDS
ACAGCGGACAAGGATACTGC+AGG 0.541962 7:+46313223 None:intergenic
ATTAATACCCAGATGAGTAT+GGG 0.543187 7:+46313596 None:intergenic
TCTTATCATATGGCAGATGA+AGG 0.548220 7:-46313334 MsG0780038413.01.T01:CDS
TGTCACTCTATGCACGTTGG+CGG 0.553389 7:-46313773 MsG0780038413.01.T01:CDS
TCAAGTGCGTCTGCAAGTCA+TGG 0.554114 7:-46314203 MsG0780038413.01.T01:CDS
ACATGGGCACGCGTTTCGAA+TGG 0.564688 7:+46313536 None:intergenic
GATTCCAATTCAAATTCACA+TGG 0.573336 7:+46313519 None:intergenic
CAGATGAGTATGGGGACTAG+TGG 0.577305 7:+46313605 None:intergenic
GTCCATCAAGAAAGCTAGAG+TGG 0.578299 7:+46313392 None:intergenic
ATATCCATAAAAGGAACCAC+AGG 0.583788 7:+46313630 None:intergenic
ACTAGTCCCCATACTCATCT+GGG 0.587426 7:-46313603 MsG0780038413.01.T01:CDS
TTCTTGCTGATCGCTTAAGG+TGG 0.589459 7:+46314145 None:intergenic
CATCTGCCATATGATAAGAT+GGG 0.608931 7:+46313338 None:intergenic
GAAAGCTAGAGTGGGCTCAA+CGG 0.610475 7:+46313401 None:intergenic
TGTCTCCGTACTCAAATCAA+GGG 0.622972 7:+46313467 None:intergenic
CACTGTCACTCTATGCACGT+TGG 0.644781 7:-46313776 MsG0780038413.01.T01:CDS
TCCATCAAGAAAGCTAGAGT+GGG 0.645286 7:+46313393 None:intergenic
ATTCCAATTCAAATTCACAT+GGG 0.652601 7:+46313520 None:intergenic
TTAATACCCAGATGAGTATG+GGG 0.659190 7:+46313597 None:intergenic
GCGTAAGAGACTTCACGTCA+AGG 0.666057 7:+46314229 None:intergenic
CAGCGGACAAGGATACTGCA+GGG 0.668558 7:+46313224 None:intergenic
AATTCTGGCGTGTATGTGAG+TGG 0.674941 7:-46313576 MsG0780038413.01.T01:CDS
GTCACTTCATCAAAACCATG+AGG 0.685120 7:+46313426 None:intergenic
TCACTTCATCAAAACCATGA+GGG 0.687561 7:+46313427 None:intergenic
CATAAAGGGAATAAGGACAG+CGG 0.736473 7:+46313207 None:intergenic
GTACTATGACAAGATCAACG+AGG 0.871544 7:-46313703 MsG0780038413.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAGATTTTTCTATATTTA+TGG - Chr7:46313459-46313478 MsG0780038413.01.T01:CDS 15.0%
!! AAAATCATGAGAAAAACATA+GGG + Chr7:46313982-46314001 None:intergenic 20.0%
!! AATTAACGATTATAAGATTG+TGG - Chr7:46313620-46313639 MsG0780038413.01.T01:CDS 20.0%
!! CATCATCATAAATTAATGTA+AGG + Chr7:46313235-46313254 None:intergenic 20.0%
!!! TATTTTGTTAGATAATGTCT+TGG + Chr7:46313495-46313514 None:intergenic 20.0%
! AATCTCTTCATAATTAGAGT+TGG + Chr7:46313447-46313466 None:intergenic 25.0%
! ATTCCAATTCAAATTCACAT+GGG + Chr7:46313830-46313849 None:intergenic 25.0%
! ATTGACTACTATGGAAATAA+TGG - Chr7:46314095-46314114 MsG0780038413.01.T01:intron 25.0%
! GAAAATCATGAGAAAAACAT+AGG + Chr7:46313983-46314002 None:intergenic 25.0%
! TATAACTTGAGAGATAATAG+AGG - Chr7:46314224-46314243 MsG0780038413.01.T01:CDS 25.0%
! TTATTTCCATAGTAGTCAAT+AGG + Chr7:46314095-46314114 None:intergenic 25.0%
!! GTTTTTCTCATGATTTTCAT+GGG - Chr7:46313985-46314004 MsG0780038413.01.T01:intron 25.0%
!! TGTTTTTCTCATGATTTTCA+TGG - Chr7:46313984-46314003 MsG0780038413.01.T01:intron 25.0%
!!! GACTTTGGTAACTAATTTTA+AGG + Chr7:46314070-46314089 None:intergenic 25.0%
AATTAATACCCAGATGAGTA+TGG + Chr7:46313755-46313774 None:intergenic 30.0%
AGAAAGACATAAAGGGAATA+AGG + Chr7:46314150-46314169 None:intergenic 30.0%
ATCTCTCAAGTTATAGAGAA+TGG + Chr7:46314219-46314238 None:intergenic 30.0%
ATTAATACCCAGATGAGTAT+GGG + Chr7:46313754-46313773 None:intergenic 30.0%
CATTCTCAGAAAGACATAAA+GGG + Chr7:46314157-46314176 None:intergenic 30.0%
CTAGTGGAAATATCCATAAA+AGG + Chr7:46313729-46313748 None:intergenic 30.0%
GAATGGTGATACACTAATAT+TGG - Chr7:46314172-46314191 MsG0780038413.01.T01:CDS 30.0%
GATTCCAATTCAAATTCACA+TGG + Chr7:46313831-46313850 None:intergenic 30.0%
TACACTAATATTGGCATTTG+AGG - Chr7:46314181-46314200 MsG0780038413.01.T01:CDS 30.0%
TCAATTTGGGCAATAATGTT+TGG - Chr7:46313676-46313695 MsG0780038413.01.T01:CDS 30.0%
TTCATGAAAGTAAGGGTTAT+CGG + Chr7:46313315-46313334 None:intergenic 30.0%
! ACATATTCAAAGTTTTCCTG+TGG - Chr7:46313701-46313720 MsG0780038413.01.T01:CDS 30.0%
AAGCAAGGTTCATGAAAGTA+AGG + Chr7:46313323-46313342 None:intergenic 35.0%
AATCAATTTCTACTCCCTCA+TGG - Chr7:46313906-46313925 MsG0780038413.01.T01:intron 35.0%
ACTCATCTGGGTATTAATTC+TGG - Chr7:46313756-46313775 MsG0780038413.01.T01:CDS 35.0%
AGCAAGGTTCATGAAAGTAA+GGG + Chr7:46313322-46313341 None:intergenic 35.0%
AGTAGTCAATAGGAAGACTT+TGG + Chr7:46314085-46314104 None:intergenic 35.0%
ATATCCATAAAAGGAACCAC+AGG + Chr7:46313720-46313739 None:intergenic 35.0%
ATATGGCAGATGAAGGAATT+TGG - Chr7:46314020-46314039 MsG0780038413.01.T01:intron 35.0%
CATCTGCCATATGATAAGAT+GGG + Chr7:46314012-46314031 None:intergenic 35.0%
CCATTCTCAGAAAGACATAA+AGG + Chr7:46314158-46314177 None:intergenic 35.0%
TAGATAATGTCTTGGTTGCT+GGG + Chr7:46313487-46313506 None:intergenic 35.0%
TCACTTCATCAAAACCATGA+GGG + Chr7:46313923-46313942 None:intergenic 35.0%
TCATCTGCCATATGATAAGA+TGG + Chr7:46314013-46314032 None:intergenic 35.0%
TCTTATCATATGGCAGATGA+AGG - Chr7:46314013-46314032 MsG0780038413.01.T01:intron 35.0%
TTAATACCCAGATGAGTATG+GGG + Chr7:46313753-46313772 None:intergenic 35.0%
TTAGATAATGTCTTGGTTGC+TGG + Chr7:46313488-46313507 None:intergenic 35.0%
! AGTCTTCCTATTGACTACTA+TGG - Chr7:46314086-46314105 MsG0780038413.01.T01:intron 35.0%
! CCTTTATGTCTTTCTGAGAA+TGG - Chr7:46314155-46314174 MsG0780038413.01.T01:CDS 35.0%
! GAGGTGAGAGTTTTCAATTT+GGG - Chr7:46313663-46313682 MsG0780038413.01.T01:CDS 35.0%
! TTTTCCTGTGGTTCCTTTTA+TGG - Chr7:46313713-46313732 MsG0780038413.01.T01:CDS 35.0%
AATCATGACCACACTTACGA+AGG + Chr7:46313542-46313561 None:intergenic 40.0%
ACTTCACGTCAAGGAATGAT+AGG + Chr7:46313112-46313131 None:intergenic 40.0%
AGGTGGAGTTTGATGAATGT+AGG + Chr7:46313188-46313207 None:intergenic 40.0%
ATGGGACCCATCTTATCATA+TGG - Chr7:46314003-46314022 MsG0780038413.01.T01:intron 40.0%
ATGTCTCCGTACTCAAATCA+AGG + Chr7:46313884-46313903 None:intergenic 40.0%
CAAGGGAGATGATCACAAAT+TGG + Chr7:46313866-46313885 None:intergenic 40.0%
CATAAAGGGAATAAGGACAG+CGG + Chr7:46314143-46314162 None:intergenic 40.0%
GGTGGAGTTTGATGAATGTA+GGG + Chr7:46313187-46313206 None:intergenic 40.0%
GTACTATGACAAGATCAACG+AGG - Chr7:46313644-46313663 MsG0780038413.01.T01:CDS 40.0%
GTCACTTCATCAAAACCATG+AGG + Chr7:46313924-46313943 None:intergenic 40.0%
GTGCCCATGTGAATTTGAAT+TGG - Chr7:46313824-46313843 MsG0780038413.01.T01:intron 40.0%
TCCATCAAGAAAGCTAGAGT+GGG + Chr7:46313957-46313976 None:intergenic 40.0%
TCGAATGGCTAACCAGTTAA+CGG + Chr7:46313799-46313818 None:intergenic 40.0%
TGTCTCCGTACTCAAATCAA+GGG + Chr7:46313883-46313902 None:intergenic 40.0%
TGTTTCTTGCTGATCGCTTA+AGG + Chr7:46313208-46313227 None:intergenic 40.0%
TTCTGAATTAAGCGACGCAA+GGG + Chr7:46313275-46313294 None:intergenic 40.0%
! AATTTGGAGTTGACGAGTCA+TGG - Chr7:46314036-46314055 MsG0780038413.01.T01:intron 40.0%
! CATCTCCCTTGATTTGAGTA+CGG - Chr7:46313875-46313894 MsG0780038413.01.T01:intron 40.0%
! CGAGGTGAGAGTTTTCAATT+TGG - Chr7:46313662-46313681 MsG0780038413.01.T01:CDS 40.0%
AAAGTAAGGGTTATCGGCGA+GGG + Chr7:46313309-46313328 None:intergenic 45.0%
AAGTCAGGTTCCTGGAAGAA+AGG + Chr7:46313356-46313375 None:intergenic 45.0%
AATTCTGGCGTGTATGTGAG+TGG - Chr7:46313771-46313790 MsG0780038413.01.T01:CDS 45.0%
ACTAGTCCCCATACTCATCT+GGG - Chr7:46313744-46313763 MsG0780038413.01.T01:CDS 45.0%
AGTCAGGTTCCTGGAAGAAA+GGG + Chr7:46313355-46313374 None:intergenic 45.0%
GAGTTTCACCTTCGTAAGTG+TGG - Chr7:46313531-46313550 MsG0780038413.01.T01:CDS 45.0%
GTCCATCAAGAAAGCTAGAG+TGG + Chr7:46313958-46313977 None:intergenic 45.0%
GTTATAGAGAATGGCCGAGT+TGG + Chr7:46314210-46314229 None:intergenic 45.0%
TCTGAATTAAGCGACGCAAG+GGG + Chr7:46313274-46313293 None:intergenic 45.0%
TTCTTGCTGATCGCTTAAGG+TGG + Chr7:46313205-46313224 None:intergenic 45.0%
! GAAGTAGTTGGTTCCTGCAA+TGG - Chr7:46313395-46313414 MsG0780038413.01.T01:CDS 45.0%
! GTTCTGAATTAAGCGACGCA+AGG + Chr7:46313276-46313295 None:intergenic 45.0%
! TACTTCGAGGCGTCTGTATA+GGG + Chr7:46313381-46313400 None:intergenic 45.0%
!! AATGGACTGCTCTGCTTGTA+CGG - Chr7:46313413-46313432 MsG0780038413.01.T01:CDS 45.0%
ATGTGAGTGGCACCGTTAAC+TGG - Chr7:46313784-46313803 MsG0780038413.01.T01:CDS 50.0%
CACTAGTCCCCATACTCATC+TGG - Chr7:46313743-46313762 MsG0780038413.01.T01:CDS 50.0%
CACTGTCACTCTATGCACGT+TGG - Chr7:46313571-46313590 MsG0780038413.01.T01:CDS 50.0%
CAGATGAGTATGGGGACTAG+TGG + Chr7:46313745-46313764 None:intergenic 50.0%
GAAAGTAAGGGTTATCGGCG+AGG + Chr7:46313310-46313329 None:intergenic 50.0%
GCGTAAGAGACTTCACGTCA+AGG + Chr7:46313121-46313140 None:intergenic 50.0%
GGCATTTGAGGAAGCCAACT+CGG - Chr7:46314193-46314212 MsG0780038413.01.T01:CDS 50.0%
TACAGACGCCTCGAAGTAGT+TGG - Chr7:46313383-46313402 MsG0780038413.01.T01:CDS 50.0%
TCAAGTGCGTCTGCAAGTCA+TGG - Chr7:46313144-46313163 MsG0780038413.01.T01:CDS 50.0%
TGCAGGAACCAACTACTTCG+AGG + Chr7:46313394-46313413 None:intergenic 50.0%
TGTCACTCTATGCACGTTGG+CGG - Chr7:46313574-46313593 MsG0780038413.01.T01:CDS 50.0%
! ACTTCGAGGCGTCTGTATAG+GGG + Chr7:46313380-46313399 None:intergenic 50.0%
! CTACTTCGAGGCGTCTGTAT+AGG + Chr7:46313382-46313401 None:intergenic 50.0%
! GAAAGCTAGAGTGGGCTCAA+CGG + Chr7:46313949-46313968 None:intergenic 50.0%
! TCTATGCACGTTGGCGGTTT+TGG - Chr7:46313580-46313599 MsG0780038413.01.T01:CDS 50.0%
!! GCCCACTCTAGCTTTCTTGA+TGG - Chr7:46313953-46313972 MsG0780038413.01.T01:intron 50.0%
AAAGGGCTGTCGAGGAAGCA+AGG + Chr7:46313338-46313357 None:intergenic 55.0%
ACAGCGGACAAGGATACTGC+AGG + Chr7:46314127-46314146 None:intergenic 55.0%
ACATGGGCACGCGTTTCGAA+TGG + Chr7:46313814-46313833 None:intergenic 55.0%
ATAGGGGGAAGTCAGGTTCC+TGG + Chr7:46313364-46313383 None:intergenic 55.0%
CAAGCAGAGCAGTCCATTGC+AGG + Chr7:46313411-46313430 None:intergenic 55.0%
CAGCGGACAAGGATACTGCA+GGG + Chr7:46314126-46314145 None:intergenic 55.0%
CGTCTGTATAGGGGGAAGTC+AGG + Chr7:46313371-46313390 None:intergenic 55.0%
GGGAATAAGGACAGCGGACA+AGG + Chr7:46314137-46314156 None:intergenic 55.0%
! CTTCGAGGCGTCTGTATAGG+GGG + Chr7:46313379-46313398 None:intergenic 55.0%
!!! GCACGTTGGCGGTTTTGGTT+TGG - Chr7:46313585-46313604 MsG0780038413.01.T01:CDS 55.0%
AGGGTTATCGGCGAGGGTGA+TGG + Chr7:46313303-46313322 None:intergenic 60.0%
CCTCGACAGCCCTTTCTTCC+AGG - Chr7:46313343-46313362 MsG0780038413.01.T01:CDS 60.0%
CCTGGAAGAAAGGGCTGTCG+AGG + Chr7:46313346-46313365 None:intergenic 60.0%
! GTTATCGGCGAGGGTGATGG+AGG + Chr7:46313300-46313319 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 46313098 46314271 46313098 ID=MsG0780038413.01;Name=MsG0780038413.01
Chr7 mRNA 46313098 46314271 46313098 ID=MsG0780038413.01.T01;Parent=MsG0780038413.01;Name=MsG0780038413.01.T01;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|2|0|295
Chr7 exon 46314107 46314271 46314107 ID=MsG0780038413.01.T01:exon:14110;Parent=MsG0780038413.01.T01
Chr7 exon 46313098 46313820 46313098 ID=MsG0780038413.01.T01:exon:14109;Parent=MsG0780038413.01.T01
Chr7 CDS 46314107 46314271 46314107 ID=MsG0780038413.01.T01:cds;Parent=MsG0780038413.01.T01
Chr7 CDS 46313098 46313820 46313098 ID=MsG0780038413.01.T01:cds;Parent=MsG0780038413.01.T01
Gene Sequence

>MsG0780038413.01.T01

ATGGAAGAAATCCTATCATTCCTTGACGTGAAGTCTCTTACGCGATTCAAGTGCGTCTGCAAGTCATGGAAGACTCTCATATCTGACCCTACATTCATCAAACTCCACCTTAAGCGATCAGCAAGAAACACACACCTTACATTAATTTATGATGATGTTAAGATCTGTGGTCATGATTTTATACACACACTGTCACTCTATGCACGTTGGCGGTTTTGGTTTGGTTATGATGATTCAATTAACGATTATAAGATTGTGGCGTACTATGACAAGATCAACGAGGTGAGAGTTTTCAATTTGGGCAATAATGTTTGGAGACATATTCAAAGTTTTCCTGTGGTTCCTTTTATGGATATTTCCACTAGTCCCCATACTCATCTGGGTATTAATTCTGGCGTGTATGTGAGTGGCACCGTTAACTGGTTAGCCATTCGAAACGCGTGCCCATGTGAATTTGAATTGGAATCTATTACTATTGACCAATTTGTGATCATCTCCCTTGATTTGAGTACGGAGACATACAATCAATTTCTACTCCCTCATGGTTTTGATGAAGTGACATCCGTTGAGCCCACTCTAGCTTTCTTGATGGACTCCCTATGTTTTTCTCATGATTTTCATGGGACCCATCTTATCATATGGCAGATGAAGGAATTTGGAGTTGACGAGTCATGGACTCAGTTCCTTAAAATTAGTTACCAAAGTCTTCCTATTGACTACTATGGAAATAATGGAAGCTCCCTGCAGTATCCTTGTCCGCTGTCCTTATTCCCTTTATGTCTTTCTGAGAATGGTGATACACTAATATTGGCATTTGAGGAAGCCAACTCGGCCATTCTCTATAACTTGAGAGATAATAGAGGAGAGAAATTAGAATTAGAAATCTAG
Protein sequence

>MsG0780038413.01.T01

MEEILSFLDVKSLTRFKCVCKSWKTLISDPTFIKLHLKRSARNTHLTLIYDDVKICGHDFIHTLSLYARWRFWFGYDDSINDYKIVAYYDKINEVRVFNLGNNVWRHIQSFPVVPFMDISTSPHTHLGINSGVYVSGTVNWLAIRNACPCEFELESITIDQFVIISLDLSTETYNQFLLPHGFDEVTSVEPTLAFLMDSLCFSHDFHGTHLIIWQMKEFGVDESWTQFLKISYQSLPIDYYGNNGSSLQYPCPLSLFPLCLSENGDTLILAFEEANSAILYNLRDNRGEKLELEI*