AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031208.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031208.01.T01 MTR_6g017270 74.064 374 38 4 1 373 27 342 0.0 531
MsG0680031208.01.T01 MTR_6g017280 70.400 375 97 5 1 373 27 389 0.0 513
MsG0680031208.01.T01 MTR_7g009265 77.607 326 71 2 49 373 1 325 0.0 512
MsG0680031208.01.T01 MTR_6g017295 72.424 330 74 2 39 352 1 329 4.70e-172 491
MsG0680031208.01.T01 MTR_6g017305 71.831 284 78 2 90 373 2 283 3.34e-143 407
MsG0680031208.01.T01 MTR_7g445890 56.728 379 130 5 1 373 34 384 1.00e-140 405
MsG0680031208.01.T01 MTR_7g035295 55.906 381 123 8 3 373 36 381 2.00e-131 382
MsG0680031208.01.T01 MTR_7g052670 52.764 398 147 11 3 372 41 425 8.73e-118 349
MsG0680031208.01.T01 MTR_2g437110 51.948 385 141 9 1 372 40 393 4.50e-113 338
MsG0680031208.01.T01 MTR_5g043160 49.630 405 157 11 1 372 68 458 8.39e-112 334
MsG0680031208.01.T01 MTR_4g129160 48.000 350 146 11 1 329 26 360 5.97e-88 270
MsG0680031208.01.T01 MTR_4g024890 44.892 372 183 11 4 371 31 384 5.61e-87 268
MsG0680031208.01.T01 MTR_2g043410 41.832 404 179 13 1 373 40 418 5.46e-85 264
MsG0680031208.01.T01 MTR_7g055870 43.237 414 172 14 3 373 33 426 5.72e-85 264
MsG0680031208.01.T01 MTR_6g055210 43.112 392 192 10 1 372 40 420 1.22e-84 264
MsG0680031208.01.T01 MTR_7g091630 42.750 400 185 11 1 373 50 432 4.74e-84 262
MsG0680031208.01.T01 MTR_7g055930 41.262 412 183 12 3 373 33 426 3.46e-83 259
MsG0680031208.01.T01 MTR_7g056503 40.420 381 197 9 1 372 39 398 2.07e-82 257
MsG0680031208.01.T01 MTR_2g043400 40.988 405 181 12 1 373 41 419 4.42e-82 256
MsG0680031208.01.T01 MTR_7g055977 42.895 373 188 9 4 371 28 380 1.15e-81 254
MsG0680031208.01.T01 MTR_4g030090 42.559 383 195 13 1 372 32 400 3.43e-81 254
MsG0680031208.01.T01 MTR_5g069760 42.706 377 179 11 1 371 24 369 5.49e-81 252
MsG0680031208.01.T01 MTR_4g030830 41.026 390 190 13 1 372 27 394 1.55e-80 252
MsG0680031208.01.T01 MTR_3g464470 40.157 381 196 10 1 373 25 381 3.67e-80 250
MsG0680031208.01.T01 MTR_7g056003 42.750 400 179 15 1 373 33 409 1.34e-79 250
MsG0680031208.01.T01 MTR_7g056290 39.506 405 189 13 1 372 40 421 1.34e-79 250
MsG0680031208.01.T01 MTR_3g464500 41.099 382 194 11 1 373 45 404 1.53e-78 247
MsG0680031208.01.T01 MTR_1g442850 41.710 386 177 13 1 371 23 375 2.09e-78 246
MsG0680031208.01.T01 MTR_4g013180 43.258 356 178 9 3 350 31 370 3.61e-78 248
MsG0680031208.01.T01 MTR_4g019990 42.010 388 187 13 1 372 24 389 3.95e-78 246
MsG0680031208.01.T01 MTR_5g056020 42.893 394 194 13 2 372 36 421 3.41e-76 244
MsG0680031208.01.T01 MTR_5g069930 41.689 379 185 12 1 370 24 375 5.29e-76 239
MsG0680031208.01.T01 MTR_7g062100 41.995 381 189 13 1 373 42 398 8.29e-76 240
MsG0680031208.01.T01 MTR_1g088120 39.206 403 197 13 1 373 28 412 1.42e-75 239
MsG0680031208.01.T01 MTR_7g078840 39.467 413 199 14 1 371 28 431 2.34e-75 240
MsG0680031208.01.T01 MTR_4g013185 38.425 419 189 14 1 371 28 425 6.14e-75 238
MsG0680031208.01.T01 MTR_0242s0060 39.651 401 196 12 3 370 29 416 6.46e-75 238
MsG0680031208.01.T01 MTR_0242s0040 39.651 401 196 12 3 370 29 416 6.46e-75 238
MsG0680031208.01.T01 MTR_4g129190 39.793 387 196 11 1 371 24 389 6.58e-75 237
MsG0680031208.01.T01 MTR_4g013175 39.036 415 186 12 3 370 30 424 1.67e-74 237
MsG0680031208.01.T01 MTR_7g077970 38.670 406 201 13 3 371 27 421 3.88e-74 236
MsG0680031208.01.T01 MTR_7g055987 44.985 329 147 10 1 326 38 335 4.26e-74 234
MsG0680031208.01.T01 MTR_7g078900 37.965 403 208 8 1 371 30 422 5.80e-74 236
MsG0680031208.01.T01 MTR_7g056390 38.821 407 187 15 1 371 36 416 2.01e-73 234
MsG0680031208.01.T01 MTR_7g070830 37.838 407 186 13 4 371 42 420 3.36e-73 234
MsG0680031208.01.T01 MTR_6g016285 40.256 390 199 10 4 372 42 418 4.52e-73 234
MsG0680031208.01.T01 MTR_7g061050 41.818 385 178 13 1 371 31 383 5.01e-73 232
MsG0680031208.01.T01 MTR_7g060940 39.535 387 183 10 1 370 40 392 5.89e-73 232
MsG0680031208.01.T01 MTR_7g056710 40.584 377 180 11 3 370 38 379 9.98e-73 231
MsG0680031208.01.T01 MTR_7g079160 38.619 391 191 14 1 354 26 404 1.25e-72 234
MsG0680031208.01.T01 MTR_3g072470 40.050 402 191 14 1 372 37 418 2.98e-72 231
MsG0680031208.01.T01 MTR_7g078040 37.805 410 208 9 3 371 29 432 6.74e-72 231
MsG0680031208.01.T01 MTR_3g437520 40.153 391 171 14 1 353 41 406 7.44e-72 231
MsG0680031208.01.T01 MTR_0464s0020 39.024 410 193 15 1 373 41 430 8.54e-72 230
MsG0680031208.01.T01 MTR_7g057270 39.005 382 210 9 1 371 44 413 9.67e-72 230
MsG0680031208.01.T01 MTR_7g066850 41.192 386 194 12 1 373 41 406 9.95e-72 231
MsG0680031208.01.T01 MTR_7g028660 40.310 387 174 12 3 371 31 378 2.42e-71 228
MsG0680031208.01.T01 MTR_7g061090 41.221 393 178 13 3 371 42 405 3.49e-71 228
MsG0680031208.01.T01 MTR_4g033495 40.665 391 177 14 1 369 45 402 4.50e-71 229
MsG0680031208.01.T01 MTR_4g031020 38.780 410 199 12 1 372 33 428 7.61e-71 228
MsG0680031208.01.T01 MTR_0128s0010 39.842 379 204 11 1 373 39 399 8.11e-71 227
MsG0680031208.01.T01 MTR_4g030980 38.049 410 202 12 1 372 33 428 1.31e-70 227
MsG0680031208.01.T01 MTR_6g092560 42.119 387 185 14 3 372 32 396 1.41e-70 228
MsG0680031208.01.T01 MTR_1g071010 39.637 386 190 12 1 373 33 388 2.44e-70 225
MsG0680031208.01.T01 MTR_7g070880 37.717 403 192 13 4 371 42 420 4.73e-70 226
MsG0680031208.01.T01 MTR_7g022600 37.500 392 215 10 1 372 41 422 8.03e-70 225
MsG0680031208.01.T01 MTR_7g061060 41.257 366 173 12 1 352 31 368 8.35e-70 224
MsG0680031208.01.T01 MTR_1g112010 41.287 373 165 11 5 372 2 325 9.74e-70 222
MsG0680031208.01.T01 MTR_3g080370 40.051 392 197 10 4 372 42 418 1.48e-69 225
MsG0680031208.01.T01 MTR_8g066440 38.961 385 197 9 3 373 43 403 2.56e-69 223
MsG0680031208.01.T01 MTR_2g047200 39.948 383 189 14 3 372 40 394 3.48e-69 223
MsG0680031208.01.T01 MTR_5g068040 40.584 377 186 12 1 370 34 379 9.32e-69 221
MsG0680031208.01.T01 MTR_7g056717 40.957 376 181 12 4 371 43 385 1.31e-68 221
MsG0680031208.01.T01 MTR_4g034860 39.835 364 181 11 10 353 49 394 1.39e-68 221
MsG0680031208.01.T01 MTR_7g052150 37.270 381 206 12 1 370 40 398 6.83e-68 219
MsG0680031208.01.T01 MTR_7g066840 39.075 389 191 15 1 373 41 399 7.21e-68 219
MsG0680031208.01.T01 MTR_7g062060 37.084 391 205 9 1 371 30 399 2.15e-67 218
MsG0680031208.01.T01 MTR_0128s0020 40.921 391 176 15 1 370 36 392 2.22e-67 218
MsG0680031208.01.T01 MTR_2g010950 37.401 377 220 9 1 371 38 404 4.05e-67 218
MsG0680031208.01.T01 MTR_7g055830 46.128 297 118 9 105 373 76 358 7.18e-67 216
MsG0680031208.01.T01 MTR_6g065510 46.667 285 123 8 99 371 63 330 5.24e-66 213
MsG0680031208.01.T01 MTR_7g056570 40.584 377 182 12 4 371 39 382 6.40e-66 215
MsG0680031208.01.T01 MTR_4g011660 39.356 404 189 14 3 373 39 419 8.55e-66 214
MsG0680031208.01.T01 MTR_0128s0070 39.332 389 184 14 1 370 40 395 1.35e-65 213
MsG0680031208.01.T01 MTR_3g013470 39.295 397 169 14 3 366 15 372 1.92e-65 212
MsG0680031208.01.T01 MTR_0097s0030 38.281 384 194 8 3 372 34 388 6.83e-65 211
MsG0680031208.01.T01 MTR_2g047240 38.281 384 194 8 3 372 34 388 6.83e-65 211
MsG0680031208.01.T01 MTR_7g056737 41.076 353 179 10 4 352 43 370 7.56e-65 212
MsG0680031208.01.T01 MTR_5g096710 37.270 381 210 10 1 373 41 400 9.94e-65 211
MsG0680031208.01.T01 MTR_0649s0020 37.662 385 198 9 3 372 31 388 2.46e-64 210
MsG0680031208.01.T01 MTR_7g060960 40.323 372 159 11 4 370 53 366 3.73e-64 209
MsG0680031208.01.T01 MTR_7g066030 36.761 389 201 11 3 372 41 403 4.42e-64 209
MsG0680031208.01.T01 MTR_7g056760 37.887 388 202 14 1 372 41 405 5.12e-64 209
MsG0680031208.01.T01 MTR_4g008790 36.410 390 171 11 3 350 59 413 4.14e-63 209
MsG0680031208.01.T01 MTR_2g010920 36.341 399 214 13 1 371 38 424 4.98e-63 207
MsG0680031208.01.T01 MTR_0707s0020 35.322 419 200 12 4 372 47 444 5.55e-63 208
MsG0680031208.01.T01 MTR_4g030760 36.815 383 189 14 1 372 91 431 6.15e-63 207
MsG0680031208.01.T01 MTR_7g050480 37.302 378 200 11 1 370 40 388 9.57e-63 206
MsG0680031208.01.T01 MTR_4g030110 38.544 371 184 11 1 360 48 385 1.05e-62 206
MsG0680031208.01.T01 MTR_7g066100 38.243 387 199 13 3 372 31 394 1.45e-62 206
MsG0680031208.01.T01 MTR_7g078860 38.378 370 184 14 3 350 29 376 1.51e-62 205
MsG0680031208.01.T01 MTR_7g050520 37.037 378 201 11 1 370 40 388 2.20e-62 205
MsG0680031208.01.T01 MTR_7g056200 37.250 400 167 12 1 373 41 383 2.68e-62 204
MsG0680031208.01.T01 MTR_7g055953 47.521 242 113 5 130 371 87 314 3.48e-62 202
MsG0680031208.01.T01 MTR_2g047892 37.371 388 197 14 1 372 40 397 6.73e-62 204
MsG0680031208.01.T01 MTR_7g056797 36.148 379 219 9 1 372 41 403 9.50e-62 204
MsG0680031208.01.T01 MTR_7g056170 37.681 414 166 13 4 373 96 461 9.65e-62 205
MsG0680031208.01.T01 MTR_1g015730 37.905 401 180 16 3 370 29 393 1.98e-61 202
MsG0680031208.01.T01 MTR_6g086920 35.529 425 205 14 4 372 59 470 2.83e-61 205
MsG0680031208.01.T01 MTR_2g047878 38.786 379 172 12 1 372 39 364 4.70e-61 201
MsG0680031208.01.T01 MTR_2g010900 36.765 340 197 8 1 332 1 330 1.02e-60 200
MsG0680031208.01.T01 MTR_7g066000 36.979 384 199 15 3 370 45 401 1.33e-60 201
MsG0680031208.01.T01 MTR_7g077070 35.980 403 213 16 4 371 37 429 1.53e-60 201
MsG0680031208.01.T01 MTR_7g091640 43.137 306 153 9 1 296 53 347 5.68e-60 198
MsG0680031208.01.T01 MTR_7g056173 45.560 259 118 5 124 370 18 265 9.51e-59 194
MsG0680031208.01.T01 MTR_7g066060 35.550 391 207 11 3 373 43 408 1.87e-58 198
MsG0680031208.01.T01 MTR_7g061010 36.911 382 188 11 4 370 43 386 7.55e-58 193
MsG0680031208.01.T01 MTR_7g030040 40.063 317 100 10 62 372 105 337 8.90e-58 191
MsG0680031208.01.T01 MTR_1g029650 35.750 400 198 16 4 370 29 402 8.97e-58 193
MsG0680031208.01.T01 MTR_7g113500 38.535 314 171 8 67 371 81 381 6.24e-57 191
MsG0680031208.01.T01 MTR_5g058620 40.972 288 135 9 108 372 7 282 7.05e-57 187
MsG0680031208.01.T01 MTR_1g058870 40.972 288 135 9 108 372 7 282 7.05e-57 187
MsG0680031208.01.T01 MTR_7g077990 34.278 388 203 10 1 368 35 390 2.82e-56 189
MsG0680031208.01.T01 MTR_8g101940 37.565 386 190 13 1 372 20 368 7.71e-56 187
MsG0680031208.01.T01 MTR_7g077910 38.968 349 168 15 48 371 7 335 7.95e-56 186
MsG0680031208.01.T01 MTR_7g066080 36.070 402 205 13 3 373 36 416 2.50e-55 188
MsG0680031208.01.T01 MTR_2g461450 35.854 357 174 10 1 346 36 348 3.68e-55 185
MsG0680031208.01.T01 MTR_7g022670 33.156 377 181 9 1 372 41 351 3.88e-55 185
MsG0680031208.01.T01 MTR_2g006360 38.874 373 150 14 1 370 64 361 1.51e-54 184
MsG0680031208.01.T01 MTR_7g056260 39.806 309 147 9 1 293 32 317 1.37e-53 180
MsG0680031208.01.T01 MTR_7g056820 34.218 377 203 12 6 370 30 373 1.78e-52 179
MsG0680031208.01.T01 MTR_4g030790 38.436 307 126 11 1 298 37 289 6.90e-51 173
MsG0680031208.01.T01 MTR_1g015740 33.077 390 151 10 1 370 26 325 7.06e-51 173
MsG0680031208.01.T01 MTR_3g013950 32.143 392 207 15 4 370 27 384 9.51e-50 172
MsG0680031208.01.T01 MTR_6g088385 38.732 284 141 7 103 372 55 319 3.50e-49 168
MsG0680031208.01.T01 MTR_0267s0050 31.969 391 207 14 4 370 27 382 3.84e-48 167
MsG0680031208.01.T01 MTR_7g066010 32.737 391 185 13 1 372 39 370 3.96e-48 167
MsG0680031208.01.T01 MTR_7g034310 43.254 252 111 5 122 371 6 227 6.60e-48 162
MsG0680031208.01.T01 MTR_2g047895 37.342 316 145 12 68 366 26 305 8.79e-47 162
MsG0680031208.01.T01 MTR_4g037465 33.596 381 205 16 6 370 44 392 2.10e-46 163
MsG0680031208.01.T01 MTR_7g445750 36.700 297 163 7 3 282 43 331 5.55e-46 160
MsG0680031208.01.T01 MTR_4g020000 39.113 248 125 7 133 371 113 343 4.22e-42 151
MsG0680031208.01.T01 MTR_7g091610 44.974 189 89 5 192 373 68 248 5.59e-42 147
MsG0680031208.01.T01 MTR_2g021150 32.987 385 196 18 1 371 32 368 6.89e-42 150
MsG0680031208.01.T01 MTR_4g006350 30.816 331 200 6 48 370 564 873 3.48e-41 154
MsG0680031208.01.T01 MTR_1g097560 33.133 332 160 10 4 329 57 332 4.17e-41 149
MsG0680031208.01.T01 MTR_7g078960 36.897 290 139 10 105 373 22 288 6.00e-41 146
MsG0680031208.01.T01 MTR_2g017720 43.602 211 97 7 163 367 102 296 1.06e-40 149
MsG0680031208.01.T01 MTR_1g047490 36.877 301 126 11 3 284 42 297 1.28e-40 146
MsG0680031208.01.T01 MTR_2g010935 39.095 243 117 7 131 371 36 249 4.14e-40 142
MsG0680031208.01.T01 MTR_7g037670 32.708 373 168 11 1 371 41 332 9.79e-39 141
MsG0680031208.01.T01 MTR_6g081280 38.211 246 122 6 133 371 18 240 1.51e-38 138
MsG0680031208.01.T01 MTR_7g058630 44.785 163 80 2 213 373 27 181 3.75e-38 135
MsG0680031208.01.T01 MTR_8g030630 40.609 197 89 4 153 349 272 440 2.97e-37 139
MsG0680031208.01.T01 MTR_8g030630 40.838 191 101 3 187 372 77 260 9.29e-34 130
MsG0680031208.01.T01 MTR_7g061940 42.180 211 98 6 134 342 78 266 2.07e-36 133
MsG0680031208.01.T01 MTR_8g101580 30.541 370 213 11 4 371 67 394 2.33e-36 136
MsG0680031208.01.T01 MTR_2g029990 30.239 377 214 15 1 371 69 402 4.52e-36 135
MsG0680031208.01.T01 MTR_1g097330 31.215 362 192 15 4 356 37 350 7.01e-36 135
MsG0680031208.01.T01 MTR_5g011350 39.300 257 115 9 23 272 24 246 1.02e-35 131
MsG0680031208.01.T01 MTR_7g070440 31.481 378 213 12 4 370 28 370 1.19e-35 134
MsG0680031208.01.T01 MTR_7g056023 37.975 237 127 7 45 275 56 278 2.71e-35 130
MsG0680031208.01.T01 MTR_5g069950 42.211 199 83 5 103 299 35 203 1.96e-34 127
MsG0680031208.01.T01 MTR_1g050542 32.292 384 188 18 3 371 78 404 9.44e-34 129
MsG0680031208.01.T01 MTR_7g056793 36.187 257 97 10 119 370 36 230 9.71e-34 125
MsG0680031208.01.T01 MTR_4g024870 38.462 247 125 11 4 237 65 297 1.22e-33 129
MsG0680031208.01.T01 MTR_7g078940 35.254 295 140 14 5 257 54 339 2.15e-33 128
MsG0680031208.01.T01 MTR_1g054575 33.007 306 158 13 1 297 70 337 2.54e-33 131
MsG0680031208.01.T01 MTR_3g014540 32.013 303 164 12 1 293 47 317 3.41e-32 125
MsG0680031208.01.T01 MTR_6g042600 45.062 162 70 5 214 367 170 320 5.03e-32 125
MsG0680031208.01.T01 MTR_7g078880 35.124 242 111 9 149 368 94 311 2.33e-31 122
MsG0680031208.01.T01 MTR_4g128320 33.846 260 133 7 98 354 38 261 4.41e-31 119
MsG0680031208.01.T01 MTR_2g055970 29.326 341 197 14 1 333 229 533 6.17e-31 124
MsG0680031208.01.T01 MTR_2g046900 27.882 373 227 13 4 371 49 384 1.20e-30 120
MsG0680031208.01.T01 MTR_0354s0030 61.224 98 37 1 276 373 1 97 1.41e-30 112
MsG0680031208.01.T01 MTR_2g021252 29.630 378 201 18 1 371 65 384 4.30e-30 119
MsG0680031208.01.T01 MTR_2g046920 26.954 371 225 11 4 371 45 372 4.41e-30 119
MsG0680031208.01.T01 MTR_1g097490 31.627 332 171 13 4 329 70 351 4.52e-30 119
MsG0680031208.01.T01 MTR_7g061100 33.200 250 113 8 1 246 31 230 8.66e-30 117
MsG0680031208.01.T01 MTR_3g014570 31.746 315 165 13 1 301 47 325 1.68e-29 117
MsG0680031208.01.T01 MTR_8g467140 32.000 300 168 13 4 297 53 322 2.50e-29 116
MsG0680031208.01.T01 MTR_4g107820 30.435 299 169 12 4 296 57 322 2.55e-29 117
MsG0680031208.01.T01 MTR_4g107780 30.435 299 169 12 4 296 57 322 2.55e-29 117
MsG0680031208.01.T01 MTR_4g024910 46.154 143 69 3 228 370 130 264 2.82e-29 115
MsG0680031208.01.T01 MTR_4g024910 40.606 165 85 6 1 163 1 154 4.53e-22 95.9
MsG0680031208.01.T01 MTR_4g107820 30.435 299 169 12 4 296 57 322 3.64e-29 117
MsG0680031208.01.T01 MTR_6g007135 29.894 378 226 19 1 371 44 389 3.66e-29 116
MsG0680031208.01.T01 MTR_4g107780 30.435 299 169 12 4 296 57 322 3.86e-29 117
MsG0680031208.01.T01 MTR_0128s0110 35.185 216 114 9 164 370 4 202 4.80e-29 112
MsG0680031208.01.T01 MTR_1g115160 30.446 381 197 19 3 371 42 366 5.29e-29 115
MsG0680031208.01.T01 MTR_2g027820 40.323 186 97 3 191 370 122 299 9.24e-29 114
MsG0680031208.01.T01 MTR_6g048150 52.475 101 35 2 273 368 13 105 3.90e-28 107
MsG0680031208.01.T01 MTR_2g060555 33.829 269 124 10 105 360 49 276 4.00e-28 111
MsG0680031208.01.T01 MTR_0044s0300 30.612 294 171 10 3 293 58 321 5.85e-28 113
MsG0680031208.01.T01 MTR_3g007410 31.229 301 169 13 1 293 70 340 9.53e-28 113
MsG0680031208.01.T01 MTR_2g078900 30.921 304 156 11 3 293 53 315 1.11e-27 112
MsG0680031208.01.T01 MTR_3g083640 29.319 382 207 17 1 371 73 402 1.15e-27 112
MsG0680031208.01.T01 MTR_3g007360 28.689 366 200 16 1 352 70 388 1.39e-27 112
MsG0680031208.01.T01 MTR_3g013740 30.065 306 178 11 1 293 62 344 3.21e-27 111
MsG0680031208.01.T01 MTR_7g006360 50.806 124 47 3 250 371 164 275 4.74e-27 108
MsG0680031208.01.T01 MTR_7g006360 32.911 237 91 10 1 226 27 206 4.27e-17 81.3
MsG0680031208.01.T01 MTR_2g021190 28.871 381 214 16 1 371 39 372 5.58e-27 110
MsG0680031208.01.T01 MTR_6g004660 30.287 383 219 17 1 371 34 380 6.30e-27 110
MsG0680031208.01.T01 MTR_3g055000 42.466 146 63 3 227 371 1 126 1.19e-26 103
MsG0680031208.01.T01 MTR_5g022420 29.971 347 182 17 4 342 48 341 1.30e-26 109
MsG0680031208.01.T01 MTR_4g108820 30.619 307 143 12 4 306 63 303 1.83e-26 107
MsG0680031208.01.T01 MTR_5g046300 29.568 301 167 13 3 295 24 287 2.25e-26 108
MsG0680031208.01.T01 MTR_5g046290 29.568 301 167 13 3 295 24 287 2.25e-26 108
MsG0680031208.01.T01 MTR_7g013590 27.559 381 228 19 1 373 54 394 4.01e-26 108
MsG0680031208.01.T01 MTR_7g050490 37.989 179 92 5 1 176 26 188 1.51e-25 102
MsG0680031208.01.T01 MTR_1g094210 28.788 330 181 13 4 328 78 358 2.27e-25 106
MsG0680031208.01.T01 MTR_3g009310 30.303 297 167 13 4 292 63 327 2.65e-25 106
MsG0680031208.01.T01 MTR_1g094210 28.440 327 180 12 4 325 78 355 2.83e-25 106
MsG0680031208.01.T01 MTR_3g010590 30.435 322 161 12 3 310 59 331 3.83e-25 105
MsG0680031208.01.T01 MTR_3g010520 28.495 372 206 15 3 371 45 359 4.02e-25 105
MsG0680031208.01.T01 MTR_3g030240 29.023 348 184 16 3 336 60 358 4.35e-25 105
MsG0680031208.01.T01 MTR_3g007330 30.000 300 167 13 1 293 66 329 5.03e-25 105
MsG0680031208.01.T01 MTR_3g011020 28.391 317 162 12 1 300 46 314 5.12e-25 105
MsG0680031208.01.T01 MTR_3g006570 28.814 295 178 10 3 293 41 307 6.31e-25 104
MsG0680031208.01.T01 MTR_3g030330 30.033 303 176 11 3 303 40 308 7.42e-25 104
MsG0680031208.01.T01 MTR_2g046800 27.340 406 211 16 3 371 34 392 9.23e-25 104
MsG0680031208.01.T01 MTR_6g027910 27.171 357 200 13 1 328 27 352 1.07e-24 104
MsG0680031208.01.T01 MTR_3g006530 29.134 381 214 15 3 371 60 396 1.14e-24 104
MsG0680031208.01.T01 MTR_2g047832 26.648 364 210 12 4 347 50 376 1.52e-24 104
MsG0680031208.01.T01 MTR_3g010870 26.913 379 216 15 3 371 57 384 1.93e-24 103
MsG0680031208.01.T01 MTR_3g023930 27.540 374 206 16 3 371 54 367 2.91e-24 102
MsG0680031208.01.T01 MTR_3g006670 29.118 340 160 16 1 305 67 360 3.53e-24 103
MsG0680031208.01.T01 MTR_3g024040 31.507 292 163 12 3 293 51 306 5.19e-24 102
MsG0680031208.01.T01 MTR_3g011100 30.820 305 169 14 1 293 253 527 5.50e-24 103
MsG0680031208.01.T01 MTR_4g031770 26.873 387 223 15 3 371 24 368 5.58e-24 102
MsG0680031208.01.T01 MTR_6g065980 29.430 316 168 10 3 305 36 309 7.26e-24 101
MsG0680031208.01.T01 MTR_0760s0010 28.571 371 213 13 4 371 68 389 7.37e-24 102
MsG0680031208.01.T01 MTR_3g011060 27.922 308 180 13 1 293 46 326 1.21e-23 101
MsG0680031208.01.T01 MTR_2g021155 30.303 396 191 24 1 373 54 387 1.23e-23 103
MsG0680031208.01.T01 MTR_2g021155 29.146 199 112 9 104 293 710 888 1.58e-12 69.3
MsG0680031208.01.T01 MTR_7g407070 29.126 309 178 11 4 293 53 339 1.51e-23 101
MsG0680031208.01.T01 MTR_2g046830 28.097 331 194 12 4 329 46 337 2.36e-23 100
MsG0680031208.01.T01 MTR_3g006500 29.043 303 156 13 3 288 37 297 4.16e-23 99.8
MsG0680031208.01.T01 MTR_5g011200 29.470 302 171 13 1 291 35 305 4.50e-23 99.8
MsG0680031208.01.T01 MTR_3g007270 30.000 310 171 14 1 293 65 345 5.16e-23 99.8
MsG0680031208.01.T01 MTR_6g053260 29.831 295 178 11 3 293 357 626 6.18e-23 100
MsG0680031208.01.T01 MTR_4g055060 29.936 314 155 15 3 292 50 322 8.28e-23 99.0
MsG0680031208.01.T01 MTR_8g062660 30.844 308 152 12 1 285 40 309 1.07e-22 100
MsG0680031208.01.T01 MTR_5g046260 26.888 331 161 13 3 316 24 290 1.19e-22 97.1
MsG0680031208.01.T01 MTR_2g079810 31.621 253 134 11 4 245 27 251 2.16e-22 96.7
MsG0680031208.01.T01 MTR_7g066040 34.659 176 103 5 76 239 22 197 2.21e-22 95.1
MsG0680031208.01.T01 MTR_3g024110 28.956 297 167 11 3 293 121 379 2.28e-22 98.2
MsG0680031208.01.T01 MTR_3g009240 29.226 349 183 17 3 327 56 364 2.35e-22 97.8
MsG0680031208.01.T01 MTR_3g010390 29.870 308 178 12 1 292 51 336 2.78e-22 97.8
MsG0680031208.01.T01 MTR_3g030350 28.052 385 212 15 3 371 55 390 3.75e-22 97.1
MsG0680031208.01.T01 MTR_7g070900 37.647 170 70 5 133 296 237 376 3.79e-22 97.8
MsG0680031208.01.T01 MTR_3g013770 30.392 306 159 14 4 291 54 323 4.59e-22 97.1
MsG0680031208.01.T01 MTR_3g010920 27.586 377 206 17 3 371 64 381 5.09e-22 96.7
MsG0680031208.01.T01 MTR_1g055375 28.947 380 218 20 5 371 26 366 5.47e-22 96.3
MsG0680031208.01.T01 MTR_3g010970 28.939 311 169 12 3 308 68 331 5.62e-22 96.7
MsG0680031208.01.T01 MTR_3g036335 31.353 303 167 15 3 296 61 331 5.73e-22 96.7
MsG0680031208.01.T01 MTR_3g024150 28.669 293 174 10 3 291 55 316 6.13e-22 96.7
MsG0680031208.01.T01 MTR_3g024130 33.484 221 115 9 79 293 58 252 7.01e-22 95.1
MsG0680031208.01.T01 MTR_7g070937 41.045 134 63 4 133 255 12 140 7.90e-22 91.7
MsG0680031208.01.T01 MTR_3g023940 28.032 371 224 14 3 371 54 383 9.01e-22 95.9
MsG0680031208.01.T01 MTR_4g061340 31.270 307 160 16 3 293 46 317 9.43e-22 95.9
MsG0680031208.01.T01 MTR_1g054725 28.267 375 222 18 4 371 41 375 1.16e-21 95.5
MsG0680031208.01.T01 MTR_6g053240 28.947 304 174 12 3 293 48 322 2.48e-21 95.1
MsG0680031208.01.T01 MTR_1g016960 34.146 205 103 7 189 370 59 254 3.27e-21 92.0
MsG0680031208.01.T01 MTR_6g021880 27.273 385 225 18 1 371 38 381 3.75e-21 94.4
MsG0680031208.01.T01 MTR_8g030660 33.040 227 115 6 5 202 49 267 4.18e-21 92.0
MsG0680031208.01.T01 MTR_3g030250 28.767 292 161 11 3 288 57 307 5.10e-21 93.6
MsG0680031208.01.T01 MTR_7g445580 44.828 116 53 2 236 351 42 146 6.35e-21 88.6
MsG0680031208.01.T01 MTR_6g048120 27.848 395 216 18 3 371 56 407 7.87e-21 93.6
MsG0680031208.01.T01 MTR_3g036430 28.191 376 188 19 4 371 41 342 7.96e-21 92.8
MsG0680031208.01.T01 MTR_5g007610 26.433 314 178 10 1 294 59 339 1.46e-20 92.8
MsG0680031208.01.T01 MTR_5g057690 29.114 316 169 15 1 302 64 338 1.61e-20 92.4
MsG0680031208.01.T01 MTR_7g066830 33.854 192 89 7 2 180 14 180 2.26e-20 88.2
MsG0680031208.01.T01 MTR_3g010620 28.025 314 173 12 3 309 56 323 3.78e-20 91.3
MsG0680031208.01.T01 MTR_2g046860 27.509 269 164 8 79 347 7 244 5.68e-20 90.1
MsG0680031208.01.T01 MTR_3g036290 28.378 296 163 14 3 292 42 294 5.93e-20 90.5
MsG0680031208.01.T01 MTR_3g007430 29.688 320 176 14 1 305 61 346 8.06e-20 90.5
MsG0680031208.01.T01 MTR_7g038710 62.712 59 22 0 314 372 90 148 1.84e-19 84.7
MsG0680031208.01.T01 MTR_2g078850 28.525 305 165 11 3 293 50 315 2.14e-19 89.0
MsG0680031208.01.T01 MTR_2g028160 24.857 350 208 13 4 330 26 343 2.26e-19 89.4
MsG0680031208.01.T01 MTR_6g048140 26.822 343 188 14 3 329 59 354 3.47e-19 88.6
MsG0680031208.01.T01 MTR_2g021210 27.586 290 178 9 4 293 105 362 3.65e-19 89.0
MsG0680031208.01.T01 MTR_5g057790 28.354 328 166 18 1 302 64 348 4.83e-19 88.2
MsG0680031208.01.T01 MTR_7g089830 40.397 151 72 5 194 342 7 141 6.99e-19 82.8
MsG0680031208.01.T01 MTR_5g057710 26.911 327 173 16 1 302 64 349 1.24e-18 87.0
MsG0680031208.01.T01 MTR_6g004210 27.389 314 199 14 1 297 43 344 3.11e-18 85.9
MsG0680031208.01.T01 MTR_4g006840 30.544 239 119 7 3 234 19 217 3.19e-18 83.2
MsG0680031208.01.T01 MTR_4g023120 26.471 340 201 13 1 328 21 323 3.89e-18 85.1
MsG0680031208.01.T01 MTR_4g023070 26.627 338 203 13 1 328 21 323 5.50e-18 84.7
MsG0680031208.01.T01 MTR_3g010430 27.632 304 172 14 3 293 56 324 7.18e-18 84.7
MsG0680031208.01.T01 MTR_7g067680 29.333 300 152 12 1 291 67 315 7.48e-18 84.7
MsG0680031208.01.T01 MTR_7g055850 37.791 172 73 7 4 147 34 199 8.75e-18 83.2
MsG0680031208.01.T01 MTR_3g034130 28.904 301 178 13 4 292 30 306 9.19e-18 84.3
MsG0680031208.01.T01 MTR_1g058190 26.910 301 157 11 5 293 57 306 1.10e-17 84.0
MsG0680031208.01.T01 MTR_4g023080 25.145 346 200 14 4 344 30 321 1.30e-17 83.6
MsG0680031208.01.T01 MTR_3g058470 28.446 341 161 15 3 329 57 328 2.13e-17 83.2
MsG0680031208.01.T01 MTR_3g009260 29.598 348 176 17 3 325 61 364 2.85e-17 82.8
MsG0680031208.01.T01 MTR_4g053470 28.940 349 162 16 1 341 40 310 4.30e-17 81.6
MsG0680031208.01.T01 MTR_7g021580 51.064 94 35 4 278 371 218 300 4.94e-17 81.3
MsG0680031208.01.T01 MTR_7g021580 31.102 254 117 13 1 238 51 262 6.38e-15 75.1
MsG0680031208.01.T01 MTR_5g057020 24.516 310 161 12 1 293 64 317 5.77e-17 81.6
MsG0680031208.01.T01 MTR_7g007300 24.668 377 220 15 4 371 124 445 6.21e-17 82.4
MsG0680031208.01.T01 MTR_2g028140 25.159 314 191 11 4 291 26 321 6.42e-17 82.0
MsG0680031208.01.T01 MTR_3g055070 35.971 139 63 4 227 364 1 114 7.78e-17 77.4
MsG0680031208.01.T01 MTR_2g028130 24.069 349 210 13 4 330 26 341 1.08e-16 81.3
MsG0680031208.01.T01 MTR_6g007150 27.852 298 181 15 79 371 69 337 1.96e-16 80.1
MsG0680031208.01.T01 MTR_7g062070 37.692 130 70 5 231 356 76 198 2.22e-16 77.4
MsG0680031208.01.T01 MTR_5g070380 39.535 129 67 5 10 134 43 164 5.34e-16 75.9
MsG0680031208.01.T01 MTR_1g056710 28.831 385 212 21 1 371 52 388 5.38e-16 79.0
MsG0680031208.01.T01 MTR_2g078870 30.493 223 120 9 75 295 51 240 9.16e-16 77.8
MsG0680031208.01.T01 MTR_6g013270 29.739 306 162 14 3 291 49 318 1.22e-15 78.2
MsG0680031208.01.T01 MTR_7g058660 37.615 109 66 1 259 367 104 210 1.26e-15 75.5
MsG0680031208.01.T01 MTR_3g030320 30.709 254 129 13 80 330 44 253 2.91e-15 75.9
MsG0680031208.01.T01 MTR_3g034180 27.852 298 185 11 4 292 144 420 2.98e-15 77.4
MsG0680031208.01.T01 MTR_2g025420 24.570 407 227 18 4 371 27 392 3.26e-15 77.0
MsG0680031208.01.T01 MTR_6g027890 27.848 316 161 15 79 371 53 324 4.65e-15 75.9
MsG0680031208.01.T01 MTR_5g046280 28.934 197 106 10 105 295 22 190 7.25e-15 74.3
MsG0680031208.01.T01 MTR_8g073550 29.245 212 115 9 4 208 51 234 7.75e-15 73.6
MsG0680031208.01.T01 MTR_4g108810 35.393 178 95 9 195 371 78 236 8.78e-15 73.6
MsG0680031208.01.T01 MTR_1004s0010 28.028 289 162 11 86 371 114 359 1.02e-14 75.1
MsG0680031208.01.T01 MTR_4g023200 24.672 381 217 16 3 371 30 352 1.21e-14 74.7
MsG0680031208.01.T01 MTR_1g068835 23.177 384 230 17 4 373 25 357 1.41e-14 74.7
MsG0680031208.01.T01 MTR_1g097370 29.508 244 133 11 113 346 119 333 1.65e-14 75.1
MsG0680031208.01.T01 MTR_2g025960 23.529 272 155 11 79 330 3 241 2.39e-14 73.6
MsG0680031208.01.T01 MTR_4g053510 43.820 89 47 2 1 87 40 127 2.92e-14 69.3
MsG0680031208.01.T01 MTR_4g122850 25.000 332 203 13 4 328 22 314 4.30e-14 73.2
MsG0680031208.01.T01 MTR_1g055070 25.954 393 202 18 1 371 67 392 4.72e-14 73.2
MsG0680031208.01.T01 MTR_4g023190 25.373 335 198 14 3 333 30 316 7.71e-14 72.4
MsG0680031208.01.T01 MTR_2g026010 24.603 378 205 18 4 357 25 346 8.28e-14 72.4
MsG0680031208.01.T01 MTR_2g043420 43.956 91 47 2 1 88 44 133 9.50e-14 68.9
MsG0680031208.01.T01 MTR_3g010870 29.126 206 118 8 3 204 57 238 1.01e-13 71.6
MsG0680031208.01.T01 MTR_1g097510 29.050 179 100 8 166 342 91 244 1.63e-13 70.5
MsG0680031208.01.T01 MTR_4g023150 24.179 335 203 13 3 333 30 317 2.04e-13 71.2
MsG0680031208.01.T01 MTR_4g070550 24.104 307 197 10 4 291 26 315 2.09e-13 71.2
MsG0680031208.01.T01 MTR_1g113900 33.742 163 82 6 133 293 41 179 2.80e-13 69.3
MsG0680031208.01.T01 MTR_2g426060 25.143 350 199 17 8 333 31 341 3.49e-13 70.9
MsG0680031208.01.T01 MTR_2g425980 22.626 358 207 16 4 333 26 341 6.28e-13 70.1
MsG0680031208.01.T01 MTR_1g112930 27.852 298 172 14 3 293 45 306 7.24e-13 69.7
MsG0680031208.01.T01 MTR_7g056727 36.424 151 79 6 23 165 3 144 9.90e-13 67.4
MsG0680031208.01.T01 MTR_1g114650 32.258 155 85 6 137 291 24 158 1.33e-12 67.4
MsG0680031208.01.T01 MTR_2g021050 24.064 374 214 14 4 364 26 342 2.29e-12 68.2
MsG0680031208.01.T01 MTR_3g006640 28.936 235 123 10 78 295 17 224 3.12e-12 67.0
MsG0680031208.01.T01 MTR_5g009060 30.769 221 123 10 80 291 143 342 4.50e-12 67.4
MsG0680031208.01.T01 MTR_2g024100 24.181 397 227 17 4 370 28 380 1.35e-11 65.9
MsG0680031208.01.T01 MTR_1g055135 25.552 317 181 14 3 297 33 316 1.39e-11 65.9
MsG0680031208.01.T01 MTR_8g102520 26.210 248 139 9 90 328 60 272 1.76e-11 65.1
MsG0680031208.01.T01 MTR_2g426090 21.154 312 194 10 4 291 27 310 1.78e-11 65.5
MsG0680031208.01.T01 MTR_2g426070 22.938 388 246 18 4 373 27 379 1.78e-11 65.5
MsG0680031208.01.T01 MTR_6g460450 43.333 90 48 2 1 87 47 136 2.60e-11 61.6
MsG0680031208.01.T01 MTR_3g007390 30.769 182 97 9 133 305 2 163 4.47e-11 62.4
MsG0680031208.01.T01 MTR_8g069515 31.852 135 71 5 1 120 34 162 4.68e-11 61.6
MsG0680031208.01.T01 MTR_7g060930 46.875 64 34 0 216 279 15 78 5.02e-11 58.9
MsG0680031208.01.T01 MTR_2g021770 24.444 360 208 15 5 321 34 372 5.32e-11 63.9
MsG0680031208.01.T01 MTR_1g068875 23.499 383 229 17 4 373 25 356 5.51e-11 63.9
MsG0680031208.01.T01 MTR_7g078050 38.739 111 55 6 4 110 27 128 5.62e-11 62.8
MsG0680031208.01.T01 MTR_3g034160 25.743 303 193 12 4 296 30 310 7.56e-11 63.5
MsG0680031208.01.T01 MTR_3g058440 27.757 263 144 13 3 250 55 286 7.56e-11 63.2
MsG0680031208.01.T01 MTR_7g061130 40.816 98 46 4 276 371 1 88 9.22e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031208.01.T01 AT3G06240 25.845 414 210 20 4 371 57 419 1.02e-14 75.5
MsG0680031208.01.T01 AT3G23880 25.085 295 186 10 4 291 35 301 3.95e-14 73.6

Find 61 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAGCAATTCTCTTTAAT+TGG 0.125388 6:-16046658 MsG0680031208.01.T01:CDS
CTGAAGGTTCGGGAGAATTT+AGG 0.157573 6:-16047546 MsG0680031208.01.T01:CDS
ATCTGGCAAATGAAGGAATT+TGG 0.226637 6:-16046848 MsG0680031208.01.T01:CDS
TTACTTTGGGTGATAATTAT+TGG 0.227366 6:-16047168 MsG0680031208.01.T01:CDS
TGAAGTAGGGATCGCATATT+AGG 0.245032 6:+16047629 None:intergenic
AGATTGCTTAAGGTGTATTT+TGG 0.264428 6:+16047606 None:intergenic
TCCAACTCTTTCTGTATTGA+TGG 0.266583 6:-16046915 MsG0680031208.01.T01:CDS
ACATACACTCGTTCTCTCTT+TGG 0.283045 6:-16047369 MsG0680031208.01.T01:CDS
TCATTTGCCAGATAACAAAA+TGG 0.287371 6:+16046858 None:intergenic
CTCAAACATGTCTGAAGGTT+CGG 0.307936 6:-16047557 MsG0680031208.01.T01:CDS
TGAAGGTTCGGGAGAATTTA+GGG 0.326558 6:-16047545 MsG0680031208.01.T01:CDS
CTCTTACTGCCGTTGTAATA+AGG 0.335351 6:+16047194 None:intergenic
TGTGATGATCTCACTTGATT+TGG 0.339561 6:-16046999 MsG0680031208.01.T01:CDS
AATTTGGAGTTGAAGAATCT+TGG 0.352551 6:-16046832 MsG0680031208.01.T01:CDS
TGATTGTTTGCCTGTGATAT+TGG 0.357938 6:-16047137 MsG0680031208.01.T01:CDS
AGGGTTGTTGGTTCAGTCAA+TGG 0.364986 6:-16047433 MsG0680031208.01.T01:CDS
AAAGTTTGCAACTTCACCTT+TGG 0.389193 6:-16047280 MsG0680031208.01.T01:CDS
AGTGCCCATCTCTCGTTTGC+TGG 0.406775 6:-16047521 MsG0680031208.01.T01:CDS
TATCAATGTATCACCATTCT+CGG 0.406957 6:+16046700 None:intergenic
TTGTGTTCTTATGTTTGAAA+AGG 0.408202 6:-16047228 MsG0680031208.01.T01:CDS
TCAAACATGTCTGAAGGTTC+GGG 0.412180 6:-16047556 MsG0680031208.01.T01:CDS
AATGACGCGGGTAGGGTTGT+TGG 0.416622 6:-16047445 MsG0680031208.01.T01:CDS
ATTTGAAAAGTAGTATTTGT+TGG 0.417792 6:-16047075 MsG0680031208.01.T01:CDS
GAAGTAGGGATCGCATATTA+GGG 0.422004 6:+16047630 None:intergenic
CCGCGTCATTGTAAAAGAAT+TGG 0.426673 6:+16047458 None:intergenic
TCTTCAAATGACAAATATAT+CGG 0.428925 6:+16047041 None:intergenic
TCCTTCGTCTAGATTGCTTA+AGG 0.431875 6:+16047596 None:intergenic
TTAAAGAGAATTGCTTGGTC+TGG 0.437503 6:+16046662 None:intergenic
CATTTGCCAGATAACAAAAT+GGG 0.451131 6:+16046859 None:intergenic
TTGTCATTTGAAGAATCTTA+CGG 0.460819 6:-16047032 MsG0680031208.01.T01:CDS
TTCGGTAAGTATGTGCGAAA+TGG 0.470962 6:-16047103 MsG0680031208.01.T01:CDS
TCCAATTAAAGAGAATTGCT+TGG 0.470966 6:+16046657 None:intergenic
TGTTGGTTCAGTCAATGGAT+TGG 0.474033 6:-16047428 MsG0680031208.01.T01:CDS
TGTGTTCTTATGTTTGAAAA+GGG 0.476615 6:-16047227 MsG0680031208.01.T01:CDS
AAGGACAAAATCTGAAACAT+TGG 0.478777 6:-16047335 MsG0680031208.01.T01:CDS
CAAGGGATATGTTGAAAGCT+TGG 0.488412 6:-16046579 MsG0680031208.01.T01:CDS
ACTCTCCAGCAAACGAGAGA+TGG 0.508526 6:+16047516 None:intergenic
CTCTCCAGCAAACGAGAGAT+GGG 0.518470 6:+16047517 None:intergenic
ATATTGGTGAAACATCCTTT+CGG 0.520040 6:-16047121 MsG0680031208.01.T01:CDS
TGAAGTGTGTTTGCAAGTCA+TGG 0.521146 6:-16047657 MsG0680031208.01.T01:CDS
ATTGGTGGTAAGGATCGGTA+AGG 0.530003 6:+16047476 None:intergenic
TTGTAAAAGAATTGGTGGTA+AGG 0.534687 6:+16047466 None:intergenic
CAAGCTTTCAACATATCCCT+TGG 0.537010 6:+16046580 None:intergenic
CGTCATTGTAAAAGAATTGG+TGG 0.541360 6:+16047461 None:intergenic
AAACACATTGGTGTCATTCG+AGG 0.545134 6:+16046725 None:intergenic
CTCTTTGGAATCCTGCCACA+AGG 0.548262 6:-16047354 MsG0680031208.01.T01:CDS
TCCATCAATACAGAAAGAGT+TGG 0.559424 6:+16046914 None:intergenic
AAAGAATTGGTGGTAAGGAT+CGG 0.569885 6:+16047471 None:intergenic
GGATGTTTCACCAATATCAC+AGG 0.570175 6:+16047127 None:intergenic
ATCCTCTCAAACATGTCTGA+AGG 0.584349 6:-16047562 MsG0680031208.01.T01:CDS
AACACATTGGTGTCATTCGA+GGG 0.593892 6:+16046726 None:intergenic
AACCTTCAGACATGTTTGAG+AGG 0.596712 6:+16047560 None:intergenic
CGAGTGTATGTGATAGTAAG+CGG 0.607580 6:+16047381 None:intergenic
TGTTGAATTATCATAACCAA+AGG 0.615063 6:+16047264 None:intergenic
TTTCGCACATACTTACCGAA+AGG 0.631385 6:+16047106 None:intergenic
TTGGTGGTAAGGATCGGTAA+GGG 0.638749 6:+16047477 None:intergenic
ACATGTTTGAGAGGATTGCG+AGG 0.642241 6:+16047569 None:intergenic
GCTCTTCATCACAACATCGA+GGG 0.648253 6:+16046948 None:intergenic
ACCTTAAGCAATCTAGACGA+AGG 0.664735 6:-16047597 MsG0680031208.01.T01:CDS
TGATAGCGACCTTATTACAA+CGG 0.689930 6:-16047203 MsG0680031208.01.T01:CDS
AGCTCTTCATCACAACATCG+AGG 0.727977 6:+16046947 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAAAAGTAGTATTTGT+TGG - Chr6:16047154-16047173 MsG0680031208.01.T01:CDS 20.0%
!! TAGAATCATAAGAAAAATAG+AGG + Chr6:16047344-16047363 None:intergenic 20.0%
!! TCTTCAAATGACAAATATAT+CGG + Chr6:16047191-16047210 None:intergenic 20.0%
!!! AAAGTACCAATAAAATTTTG+TGG - Chr6:16047619-16047638 MsG0680031208.01.T01:CDS 20.0%
!!! GATTCGTATAACTAATTTTA+AGG + Chr6:16047431-16047450 None:intergenic 20.0%
! TGTGTTCTTATGTTTGAAAA+GGG - Chr6:16047002-16047021 MsG0680031208.01.T01:CDS 25.0%
! TGTTGAATTATCATAACCAA+AGG + Chr6:16046968-16046987 None:intergenic 25.0%
! TTACTTTGGGTGATAATTAT+TGG - Chr6:16047061-16047080 MsG0680031208.01.T01:CDS 25.0%
! TTGTGTTCTTATGTTTGAAA+AGG - Chr6:16047001-16047020 MsG0680031208.01.T01:CDS 25.0%
!! AGTGAACCACAAAATTTTAT+TGG + Chr6:16047628-16047647 None:intergenic 25.0%
!! TTGTCATTTGAAGAATCTTA+CGG - Chr6:16047197-16047216 MsG0680031208.01.T01:CDS 25.0%
!!! AAGTTGCAAACTTTTTTCTT+GGG + Chr6:16046943-16046962 None:intergenic 25.0%
!!! TCTAAACGATTTTAAAGATC+AGG - Chr6:16047452-16047471 MsG0680031208.01.T01:CDS 25.0%
ACCAAGCAATTCTCTTTAAT+TGG - Chr6:16047571-16047590 MsG0680031208.01.T01:CDS 30.0%
ATATTGGTGAAACATCCTTT+CGG - Chr6:16047108-16047127 MsG0680031208.01.T01:CDS 30.0%
CATTTGCCAGATAACAAAAT+GGG + Chr6:16047373-16047392 None:intergenic 30.0%
TATCAATGTATCACCATTCT+CGG + Chr6:16047532-16047551 None:intergenic 30.0%
TCATTTGCCAGATAACAAAA+TGG + Chr6:16047374-16047393 None:intergenic 30.0%
TCCAATTAAAGAGAATTGCT+TGG + Chr6:16047575-16047594 None:intergenic 30.0%
! AAGGACAAAATCTGAAACAT+TGG - Chr6:16046894-16046913 MsG0680031208.01.T01:CDS 30.0%
! AATTTGGAGTTGAAGAATCT+TGG - Chr6:16047397-16047416 MsG0680031208.01.T01:CDS 30.0%
! AGATTGCTTAAGGTGTATTT+TGG + Chr6:16046626-16046645 None:intergenic 30.0%
! GCAGTAAGAGTTTTTACTTT+GGG - Chr6:16047048-16047067 MsG0680031208.01.T01:CDS 30.0%
! TTGTAAAAGAATTGGTGGTA+AGG + Chr6:16046766-16046785 None:intergenic 30.0%
!! AGAAAACCCATTTTGTTATC+TGG - Chr6:16047364-16047383 MsG0680031208.01.T01:CDS 30.0%
!! TTTTGTTATCTGGCAAATGA+AGG - Chr6:16047374-16047393 MsG0680031208.01.T01:CDS 30.0%
!!! GAAGTTGCAAACTTTTTTCT+TGG + Chr6:16046944-16046963 None:intergenic 30.0%
AAAGTTTGCAACTTCACCTT+TGG - Chr6:16046949-16046968 MsG0680031208.01.T01:CDS 35.0%
ATCTGGCAAATGAAGGAATT+TGG - Chr6:16047381-16047400 MsG0680031208.01.T01:CDS 35.0%
CGTCATTGTAAAAGAATTGG+TGG + Chr6:16046771-16046790 None:intergenic 35.0%
TCCAACTCTTTCTGTATTGA+TGG - Chr6:16047314-16047333 MsG0680031208.01.T01:CDS 35.0%
TCCATCAATACAGAAAGAGT+TGG + Chr6:16047318-16047337 None:intergenic 35.0%
TGATTGTTTGCCTGTGATAT+TGG - Chr6:16047092-16047111 MsG0680031208.01.T01:CDS 35.0%
TGTGATGATCTCACTTGATT+TGG - Chr6:16047230-16047249 MsG0680031208.01.T01:CDS 35.0%
TTAAAGAGAATTGCTTGGTC+TGG + Chr6:16047570-16047589 None:intergenic 35.0%
! AAAGAATTGGTGGTAAGGAT+CGG + Chr6:16046761-16046780 None:intergenic 35.0%
! CAATTCTTTTACAATGACGC+GGG - Chr6:16046772-16046791 MsG0680031208.01.T01:CDS 35.0%
! CCAATTCTTTTACAATGACG+CGG - Chr6:16046771-16046790 MsG0680031208.01.T01:CDS 35.0%
! GGCAGTAAGAGTTTTTACTT+TGG - Chr6:16047047-16047066 MsG0680031208.01.T01:CDS 35.0%
! TGATAGCGACCTTATTACAA+CGG - Chr6:16047026-16047045 MsG0680031208.01.T01:CDS 35.0%
! TGTTTCAGATTTTGTCCTTG+TGG + Chr6:16046893-16046912 None:intergenic 35.0%
!! CTGAAACATTGGTGTCTTTT+TGG - Chr6:16046905-16046924 MsG0680031208.01.T01:CDS 35.0%
!!! AAGGTGTATTTTGGTGAAGT+AGG + Chr6:16046617-16046636 None:intergenic 35.0%
!!! AGGTGTATTTTGGTGAAGTA+GGG + Chr6:16046616-16046635 None:intergenic 35.0%
AACCTTCAGACATGTTTGAG+AGG + Chr6:16046672-16046691 None:intergenic 40.0%
ACATACACTCGTTCTCTCTT+TGG - Chr6:16046860-16046879 MsG0680031208.01.T01:CDS 40.0%
ACCTTAAGCAATCTAGACGA+AGG - Chr6:16046632-16046651 MsG0680031208.01.T01:CDS 40.0%
ATCCTCTCAAACATGTCTGA+AGG - Chr6:16046667-16046686 MsG0680031208.01.T01:CDS 40.0%
CAAGCTTTCAACATATCCCT+TGG + Chr6:16047652-16047671 None:intergenic 40.0%
CAAGGGATATGTTGAAAGCT+TGG - Chr6:16047650-16047669 MsG0680031208.01.T01:CDS 40.0%
CCATTCTCGGAAAAACACAT+TGG + Chr6:16047519-16047538 None:intergenic 40.0%
CCGCGTCATTGTAAAAGAAT+TGG + Chr6:16046774-16046793 None:intergenic 40.0%
CGAGTGTATGTGATAGTAAG+CGG + Chr6:16046851-16046870 None:intergenic 40.0%
CTCAAACATGTCTGAAGGTT+CGG - Chr6:16046672-16046691 MsG0680031208.01.T01:CDS 40.0%
CTCTTACTGCCGTTGTAATA+AGG + Chr6:16047038-16047057 None:intergenic 40.0%
GAAGTAGGGATCGCATATTA+GGG + Chr6:16046602-16046621 None:intergenic 40.0%
GGATGTTTCACCAATATCAC+AGG + Chr6:16047105-16047124 None:intergenic 40.0%
TCAAACATGTCTGAAGGTTC+GGG - Chr6:16046673-16046692 MsG0680031208.01.T01:CDS 40.0%
TCCTTCGTCTAGATTGCTTA+AGG + Chr6:16046636-16046655 None:intergenic 40.0%
TGAAGGTTCGGGAGAATTTA+GGG - Chr6:16046684-16046703 MsG0680031208.01.T01:CDS 40.0%
TGAAGTAGGGATCGCATATT+AGG + Chr6:16046603-16046622 None:intergenic 40.0%
TGAAGTGTGTTTGCAAGTCA+TGG - Chr6:16046572-16046591 MsG0680031208.01.T01:CDS 40.0%
TTCGGTAAGTATGTGCGAAA+TGG - Chr6:16047126-16047145 MsG0680031208.01.T01:CDS 40.0%
TTTCGCACATACTTACCGAA+AGG + Chr6:16047126-16047145 None:intergenic 40.0%
! AATTTTGTGGTTCACTGCCA+AGG - Chr6:16047632-16047651 MsG0680031208.01.T01:CDS 40.0%
! ATTTTGTGGTTCACTGCCAA+GGG - Chr6:16047633-16047652 MsG0680031208.01.T01:CDS 40.0%
! CCAATGTGTTTTTCCGAGAA+TGG - Chr6:16047516-16047535 MsG0680031208.01.T01:CDS 40.0%
!! AAACACATTGGTGTCATTCG+AGG + Chr6:16047507-16047526 None:intergenic 40.0%
!! AACACATTGGTGTCATTCGA+GGG + Chr6:16047506-16047525 None:intergenic 40.0%
!! TGTTGGTTCAGTCAATGGAT+TGG - Chr6:16046801-16046820 MsG0680031208.01.T01:CDS 40.0%
!!! CAAACTTTTTTCTTGGGCGT+GGG + Chr6:16046937-16046956 None:intergenic 40.0%
ACATGTTTGAGAGGATTGCG+AGG + Chr6:16046663-16046682 None:intergenic 45.0%
AGCTCTTCATCACAACATCG+AGG + Chr6:16047285-16047304 None:intergenic 45.0%
CTGAAGGTTCGGGAGAATTT+AGG - Chr6:16046683-16046702 MsG0680031208.01.T01:CDS 45.0%
GCTCTTCATCACAACATCGA+GGG + Chr6:16047284-16047303 None:intergenic 45.0%
! ATTGGTGGTAAGGATCGGTA+AGG + Chr6:16046756-16046775 None:intergenic 45.0%
! CTTTTACAATGACGCGGGTA+GGG - Chr6:16046777-16046796 MsG0680031208.01.T01:CDS 45.0%
! TCAGATTTTGTCCTTGTGGC+AGG + Chr6:16046889-16046908 None:intergenic 45.0%
! TCTTTTACAATGACGCGGGT+AGG - Chr6:16046776-16046795 MsG0680031208.01.T01:CDS 45.0%
! TTGGTGGTAAGGATCGGTAA+GGG + Chr6:16046755-16046774 None:intergenic 45.0%
!! AGGGTTGTTGGTTCAGTCAA+TGG - Chr6:16046796-16046815 MsG0680031208.01.T01:CDS 45.0%
!!! GCAAACTTTTTTCTTGGGCG+TGG + Chr6:16046938-16046957 None:intergenic 45.0%
ACTCTCCAGCAAACGAGAGA+TGG + Chr6:16046716-16046735 None:intergenic 50.0%
CTCTCCAGCAAACGAGAGAT+GGG + Chr6:16046715-16046734 None:intergenic 50.0%
!! CTCTTTGGAATCCTGCCACA+AGG - Chr6:16046875-16046894 MsG0680031208.01.T01:CDS 50.0%
AATGACGCGGGTAGGGTTGT+TGG - Chr6:16046784-16046803 MsG0680031208.01.T01:CDS 55.0%
AGTGCCCATCTCTCGTTTGC+TGG - Chr6:16046708-16046727 MsG0680031208.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr6 gene 16046565 16047686 16046565 ID=MsG0680031208.01;Name=MsG0680031208.01
Chr6 mRNA 16046565 16047686 16046565 ID=MsG0680031208.01.T01;Parent=MsG0680031208.01;Name=MsG0680031208.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|373
Chr6 exon 16046565 16047686 16046565 ID=MsG0680031208.01.T01:exon:10801;Parent=MsG0680031208.01.T01
Chr6 CDS 16046565 16047686 16046565 ID=MsG0680031208.01.T01:cds;Parent=MsG0680031208.01.T01
Gene Sequence

>MsG0680031208.01.T01

ATGTTGATGAAGTGTGTTTGCAAGTCATGGAAAACCCTAATATGCGATCCCTACTTCACCAAAATACACCTTAAGCAATCTAGACGAAGGAGTCACCTCGCAATCCTCTCAAACATGTCTGAAGGTTCGGGAGAATTTAGGGCAGTGCCCATCTCTCGTTTGCTGGAGAGTAACTCACATTCTATAACCCTTACCGATCCTTACCACCAATTCTTTTACAATGACGCGGGTAGGGTTGTTGGTTCAGTCAATGGATTGGTCTGCAAGCAAGATTGTTCTTTCACCGCTTACTATCACATACACTCGTTCTCTCTTTGGAATCCTGCCACAAGGACAAAATCTGAAACATTGGTGTCTTTTTGGAACTATCCCACGCCCAAGAAAAAAGTTTGCAACTTCACCTTTGGTTATGATAATTCAACAGACACTTACAAGATTGTGTTCTTATGTTTGAAAAGGGATGATAGCGACCTTATTACAACGGCAGTAAGAGTTTTTACTTTGGGTGATAATTATTGGAGAGACATTGATTGTTTGCCTGTGATATTGGTGAAACATCCTTTCGGTAAGTATGTGCGAAATGGTGTTTATTTGAAAAGTAGTATTTGTTGGTGTGTTCGTCACCGATATATTTGTCATTTGAAGAATCTTACGGTTGAACAATTTGTGATGATCTCACTTGATTTGGAGACAGAGACATATACACAGCTGTTGCTCCCTCGATGTTGTGATGAAGAGCTACATGATGTTCCAACTCTTTCTGTATTGATGGATTGCCTCTATTTTTCTTATGATTCTAAGAAAACCCATTTTGTTATCTGGCAAATGAAGGAATTTGGAGTTGAAGAATCTTGGACTCAATTCCTTAAAATTAGTTATACGAATCTTCTAAACGATTTTAAAGATCAGGAGTTATATAATGATTCATTTTTTCGTCGCCCTCGAATGACACCAATGTGTTTTTCCGAGAATGGTGATACATTGATATTAGCGATCAATATACCAGACCAAGCAATTCTCTTTAATTGGAAAGATAATAGAGCAAAGAGAATTGAAAGTACCAATAAAATTTTGTGGTTCACTGCCAAGGGATATGTTGAAAGCTTGGTATCGACTTCTTGA
Protein sequence

>MsG0680031208.01.T01

MLMKCVCKSWKTLICDPYFTKIHLKQSRRRSHLAILSNMSEGSGEFRAVPISRLLESNSHSITLTDPYHQFFYNDAGRVVGSVNGLVCKQDCSFTAYYHIHSFSLWNPATRTKSETLVSFWNYPTPKKKVCNFTFGYDNSTDTYKIVFLCLKRDDSDLITTAVRVFTLGDNYWRDIDCLPVILVKHPFGKYVRNGVYLKSSICWCVRHRYICHLKNLTVEQFVMISLDLETETYTQLLLPRCCDEELHDVPTLSVLMDCLYFSYDSKKTHFVIWQMKEFGVEESWTQFLKISYTNLLNDFKDQELYNDSFFRRPRMTPMCFSENGDTLILAINIPDQAILFNWKDNRAKRIESTNKILWFTAKGYVESLVSTS*