AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037914.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037914.01.T01 MTR_5g043160 55.233 344 129 8 4 340 131 456 2.46e-119 353
MsG0780037914.01.T01 MTR_7g445890 53.268 306 123 5 45 340 86 381 1.10e-105 315
MsG0780037914.01.T01 MTR_4g129160 56.811 301 100 8 8 299 81 360 6.19e-105 313
MsG0780037914.01.T01 MTR_7g009265 51.351 333 144 6 15 340 1 322 2.92e-103 307
MsG0780037914.01.T01 MTR_6g017305 53.147 286 117 4 61 340 6 280 3.33e-101 300
MsG0780037914.01.T01 MTR_6g017280 50.301 332 141 7 15 340 73 386 3.07e-99 299
MsG0780037914.01.T01 MTR_6g017295 47.778 360 152 7 15 350 11 358 1.97e-98 302
MsG0780037914.01.T01 MTR_7g052670 46.875 352 144 10 15 340 89 423 3.29e-90 278
MsG0780037914.01.T01 MTR_2g043410 45.098 357 149 12 7 340 83 415 1.64e-84 262
MsG0780037914.01.T01 MTR_7g035295 45.378 357 133 11 15 356 83 392 4.19e-84 260
MsG0780037914.01.T01 MTR_2g437110 44.838 339 138 7 15 340 89 391 1.13e-80 254
MsG0780037914.01.T01 MTR_4g013175 42.135 356 165 10 10 341 87 425 4.26e-80 251
MsG0780037914.01.T01 MTR_6g055210 44.253 348 162 12 11 340 85 418 3.01e-78 247
MsG0780037914.01.T01 MTR_2g043400 44.507 355 154 14 7 340 84 416 1.69e-76 241
MsG0780037914.01.T01 MTR_4g013185 41.408 355 167 10 10 340 87 424 2.37e-76 241
MsG0780037914.01.T01 MTR_7g078840 42.535 355 165 10 12 340 89 430 2.89e-75 239
MsG0780037914.01.T01 MTR_7g055930 46.082 319 135 9 46 340 118 423 3.27e-75 238
MsG0780037914.01.T01 MTR_7g056290 44.507 355 149 16 11 340 88 419 4.22e-75 238
MsG0780037914.01.T01 MTR_7g078900 42.165 351 165 9 10 340 89 421 6.15e-75 238
MsG0780037914.01.T01 MTR_7g055870 46.082 319 135 8 46 340 118 423 1.11e-74 237
MsG0780037914.01.T01 MTR_1g088120 41.808 354 166 11 10 340 73 409 2.29e-74 236
MsG0780037914.01.T01 MTR_1g442850 43.402 341 146 11 16 342 69 376 2.72e-74 234
MsG0780037914.01.T01 MTR_7g061050 44.868 341 140 12 16 342 78 384 3.34e-74 234
MsG0780037914.01.T01 MTR_7g060940 43.143 350 135 9 12 340 86 392 4.82e-74 234
MsG0780037914.01.T01 MTR_0464s0020 43.014 365 164 15 2 340 81 427 1.28e-73 234
MsG0780037914.01.T01 MTR_7g056717 44.248 339 149 8 12 343 82 387 1.29e-73 233
MsG0780037914.01.T01 MTR_7g056003 43.605 344 167 10 8 340 79 406 1.68e-73 234
MsG0780037914.01.T01 MTR_4g024890 42.553 329 160 10 17 340 79 383 1.66e-71 228
MsG0780037914.01.T01 MTR_3g080370 42.165 351 165 8 11 340 83 416 2.36e-71 229
MsG0780037914.01.T01 MTR_5g056020 41.926 353 167 11 12 340 81 419 5.98e-71 229
MsG0780037914.01.T01 MTR_4g033495 42.151 344 162 10 8 339 84 402 8.31e-71 228
MsG0780037914.01.T01 MTR_7g056503 42.075 347 158 10 9 340 78 396 3.48e-70 225
MsG0780037914.01.T01 MTR_7g056390 42.363 347 153 14 11 340 99 415 1.22e-69 224
MsG0780037914.01.T01 MTR_7g056710 41.935 341 153 10 12 343 78 382 1.89e-69 222
MsG0780037914.01.T01 MTR_4g034860 43.620 337 140 10 6 321 85 392 2.21e-69 223
MsG0780037914.01.T01 MTR_7g057270 39.710 345 171 9 11 340 90 412 2.69e-69 223
MsG0780037914.01.T01 MTR_3g437520 43.195 338 152 12 7 322 86 405 2.97e-69 224
MsG0780037914.01.T01 MTR_7g091630 40.223 358 164 12 10 340 95 429 4.08e-69 223
MsG0780037914.01.T01 MTR_4g031020 41.562 320 159 8 33 340 123 426 6.56e-69 222
MsG0780037914.01.T01 MTR_3g072470 42.493 353 156 14 11 339 86 415 8.63e-69 222
MsG0780037914.01.T01 MTR_6g065510 44.558 294 134 9 54 340 58 329 9.31e-69 219
MsG0780037914.01.T01 MTR_7g061060 42.985 335 144 11 1 321 66 367 1.47e-68 221
MsG0780037914.01.T01 MTR_2g010950 39.589 341 172 11 14 340 83 403 2.29e-68 220
MsG0780037914.01.T01 MTR_4g030830 40.580 345 164 13 11 340 74 392 2.85e-68 219
MsG0780037914.01.T01 MTR_6g016285 42.405 316 147 6 46 340 115 416 4.73e-68 221
MsG0780037914.01.T01 MTR_8g066440 45.098 306 133 10 46 340 119 400 1.33e-67 218
MsG0780037914.01.T01 MTR_7g055830 41.667 336 150 8 29 340 42 355 2.32e-67 216
MsG0780037914.01.T01 MTR_7g066850 44.776 335 138 13 24 340 98 403 2.46e-67 219
MsG0780037914.01.T01 MTR_5g069760 42.353 340 151 12 10 340 65 368 2.57e-67 216
MsG0780037914.01.T01 MTR_3g464500 41.791 335 158 10 15 340 95 401 3.58e-67 217
MsG0780037914.01.T01 MTR_7g079160 41.520 342 151 13 10 324 85 404 3.77e-67 219
MsG0780037914.01.T01 MTR_4g030980 40.125 319 165 7 33 340 123 426 5.59e-67 217
MsG0780037914.01.T01 MTR_7g077910 43.228 347 162 11 11 340 6 334 5.75e-67 214
MsG0780037914.01.T01 MTR_0128s0010 40.351 342 169 11 8 340 81 396 7.63e-67 216
MsG0780037914.01.T01 MTR_0649s0020 43.402 341 158 10 10 340 71 386 9.36e-67 216
MsG0780037914.01.T01 MTR_4g129190 44.194 310 138 10 46 340 99 388 1.56e-66 215
MsG0780037914.01.T01 MTR_7g028660 40.634 347 156 10 8 340 67 377 2.21e-66 214
MsG0780037914.01.T01 MTR_0128s0020 41.159 345 163 12 5 340 79 392 2.37e-66 215
MsG0780037914.01.T01 MTR_0128s0070 42.679 321 147 12 28 340 104 395 2.63e-66 214
MsG0780037914.01.T01 MTR_7g066840 43.168 322 145 11 28 340 104 396 2.75e-66 215
MsG0780037914.01.T01 MTR_7g078860 43.438 320 147 10 8 320 84 376 2.79e-66 214
MsG0780037914.01.T01 MTR_4g013180 45.296 287 133 9 43 320 99 370 2.88e-66 217
MsG0780037914.01.T01 MTR_4g019990 41.176 340 167 11 10 340 72 387 2.93e-66 214
MsG0780037914.01.T01 MTR_7g030040 42.333 300 87 5 42 340 121 335 3.89e-66 213
MsG0780037914.01.T01 MTR_7g061090 42.398 342 157 10 12 342 94 406 3.99e-66 214
MsG0780037914.01.T01 MTR_7g055953 47.410 251 107 7 92 340 86 313 7.41e-66 211
MsG0780037914.01.T01 MTR_7g077970 39.510 367 175 11 2 340 73 420 8.76e-66 214
MsG0780037914.01.T01 MTR_3g464470 43.092 304 140 9 46 340 99 378 1.05e-65 213
MsG0780037914.01.T01 MTR_4g011660 38.674 362 179 10 1 340 76 416 1.10e-65 214
MsG0780037914.01.T01 MTR_7g056737 44.631 298 129 8 32 322 102 370 2.12e-65 213
MsG0780037914.01.T01 MTR_7g052150 41.964 336 158 11 15 340 90 398 2.80e-65 212
MsG0780037914.01.T01 MTR_7g055977 41.840 337 167 9 7 338 65 377 9.29e-65 210
MsG0780037914.01.T01 MTR_7g077990 40.341 352 167 11 6 349 83 399 2.09e-64 210
MsG0780037914.01.T01 MTR_7g078040 37.838 370 182 10 1 340 80 431 3.15e-64 210
MsG0780037914.01.T01 MTR_0242s0060 38.187 364 175 9 4 340 76 416 3.57e-64 210
MsG0780037914.01.T01 MTR_0242s0040 38.187 364 175 9 4 340 76 416 3.57e-64 210
MsG0780037914.01.T01 MTR_7g055987 44.876 283 121 7 15 296 87 335 3.88e-64 208
MsG0780037914.01.T01 MTR_7g056570 42.598 331 153 12 16 340 82 381 4.07e-64 210
MsG0780037914.01.T01 MTR_7g050480 39.763 337 164 9 11 340 84 388 4.54e-64 209
MsG0780037914.01.T01 MTR_7g062100 40.950 337 167 12 10 340 85 395 5.00e-64 209
MsG0780037914.01.T01 MTR_5g058620 46.360 261 117 7 93 340 30 280 9.78e-64 204
MsG0780037914.01.T01 MTR_1g058870 46.360 261 117 7 93 340 30 280 9.78e-64 204
MsG0780037914.01.T01 MTR_1g112010 41.337 329 138 12 16 340 46 323 3.42e-63 204
MsG0780037914.01.T01 MTR_4g030090 39.316 351 183 14 1 340 67 398 5.20e-63 206
MsG0780037914.01.T01 MTR_7g056173 45.560 259 109 7 95 340 26 265 1.06e-62 203
MsG0780037914.01.T01 MTR_4g008790 42.857 322 136 11 10 320 129 413 1.89e-62 206
MsG0780037914.01.T01 MTR_7g050520 38.235 340 171 9 11 343 84 391 2.52e-62 204
MsG0780037914.01.T01 MTR_7g113500 40.752 319 162 12 34 342 81 382 4.32e-62 203
MsG0780037914.01.T01 MTR_7g070830 39.510 367 164 13 10 343 81 422 5.35e-62 204
MsG0780037914.01.T01 MTR_5g069930 40.653 337 151 12 20 341 74 376 8.63e-62 202
MsG0780037914.01.T01 MTR_7g056760 38.166 338 172 12 14 340 92 403 8.68e-62 203
MsG0780037914.01.T01 MTR_0707s0020 40.351 342 169 10 12 340 123 442 9.20e-62 204
MsG0780037914.01.T01 MTR_7g022600 39.769 347 171 12 14 340 92 420 1.21e-61 203
MsG0780037914.01.T01 MTR_7g066100 41.108 343 163 13 12 340 75 392 1.22e-61 202
MsG0780037914.01.T01 MTR_1g071010 36.578 339 179 7 10 340 75 385 2.10e-61 202
MsG0780037914.01.T01 MTR_7g077070 39.011 364 182 14 3 340 79 428 2.36e-61 202
MsG0780037914.01.T01 MTR_7g061010 39.941 338 158 8 12 341 87 387 2.48e-61 201
MsG0780037914.01.T01 MTR_5g068040 44.850 301 137 11 48 340 100 379 6.55e-61 200
MsG0780037914.01.T01 MTR_7g060960 41.298 339 145 12 12 340 72 366 9.53e-61 199
MsG0780037914.01.T01 MTR_5g096710 40.000 340 170 12 8 340 85 397 1.05e-60 200
MsG0780037914.01.T01 MTR_7g070880 39.669 363 169 14 10 343 81 422 1.22e-60 201
MsG0780037914.01.T01 MTR_6g086920 39.255 349 177 10 12 340 135 468 1.26e-60 202
MsG0780037914.01.T01 MTR_3g013470 43.416 281 120 8 46 324 106 349 4.70e-60 197
MsG0780037914.01.T01 MTR_7g062060 39.943 353 147 12 12 340 87 398 9.40e-59 195
MsG0780037914.01.T01 MTR_2g047892 43.831 308 128 12 47 340 119 395 1.08e-58 195
MsG0780037914.01.T01 MTR_2g010920 39.062 320 154 10 43 340 123 423 1.71e-58 195
MsG0780037914.01.T01 MTR_0097s0030 40.857 350 145 14 11 340 79 386 1.74e-58 194
MsG0780037914.01.T01 MTR_2g047240 40.857 350 145 14 11 340 79 386 1.74e-58 194
MsG0780037914.01.T01 MTR_7g056797 36.499 337 185 9 10 340 88 401 3.78e-58 194
MsG0780037914.01.T01 MTR_7g066030 39.535 344 167 13 12 340 84 401 2.07e-57 192
MsG0780037914.01.T01 MTR_7g056820 36.752 351 172 13 3 344 68 377 2.34e-56 188
MsG0780037914.01.T01 MTR_2g461450 38.438 320 156 10 12 325 73 357 2.39e-56 187
MsG0780037914.01.T01 MTR_2g047200 40.517 348 149 15 12 340 84 392 8.72e-56 187
MsG0780037914.01.T01 MTR_7g056200 37.283 346 151 11 10 340 86 380 2.14e-55 186
MsG0780037914.01.T01 MTR_2g010900 38.369 331 155 13 12 316 44 351 6.91e-55 184
MsG0780037914.01.T01 MTR_6g092560 39.683 315 151 9 42 340 103 394 9.08e-55 186
MsG0780037914.01.T01 MTR_7g034310 46.400 250 93 9 94 340 15 226 9.71e-55 179
MsG0780037914.01.T01 MTR_6g088385 41.404 285 137 7 67 340 52 317 1.23e-54 182
MsG0780037914.01.T01 MTR_2g006360 41.639 305 120 13 46 343 111 364 4.58e-53 179
MsG0780037914.01.T01 MTR_7g091640 39.583 288 144 10 6 283 91 358 7.20e-52 176
MsG0780037914.01.T01 MTR_7g066080 38.147 367 156 14 12 340 80 413 4.22e-51 176
MsG0780037914.01.T01 MTR_2g047895 39.009 323 147 13 37 347 28 312 1.01e-50 172
MsG0780037914.01.T01 MTR_5g011350 43.096 239 102 6 11 245 38 246 1.41e-50 169
MsG0780037914.01.T01 MTR_4g030110 39.498 319 139 12 17 322 100 377 2.88e-50 172
MsG0780037914.01.T01 MTR_2g047878 40.924 303 125 11 43 340 109 362 4.70e-50 171
MsG0780037914.01.T01 MTR_7g056260 41.264 269 131 8 1 266 73 317 7.98e-50 169
MsG0780037914.01.T01 MTR_7g066000 36.127 346 176 14 10 340 86 401 1.37e-49 171
MsG0780037914.01.T01 MTR_7g066060 37.283 346 175 13 11 340 86 405 1.00e-48 171
MsG0780037914.01.T01 MTR_7g022670 35.224 335 134 10 13 340 91 349 1.56e-48 167
MsG0780037914.01.T01 MTR_8g101940 37.798 336 160 11 16 340 69 366 5.68e-48 166
MsG0780037914.01.T01 MTR_7g091610 39.914 233 122 5 114 340 25 245 6.59e-48 162
MsG0780037914.01.T01 MTR_4g030790 44.206 233 100 11 46 269 76 287 8.53e-48 165
MsG0780037914.01.T01 MTR_1g015730 39.355 310 134 10 46 340 123 393 2.61e-47 165
MsG0780037914.01.T01 MTR_0267s0050 35.043 351 184 12 9 344 65 386 4.66e-47 164
MsG0780037914.01.T01 MTR_4g006350 33.898 354 191 12 8 348 558 881 6.22e-46 168
MsG0780037914.01.T01 MTR_3g013950 33.994 353 187 13 9 344 65 388 6.79e-46 161
MsG0780037914.01.T01 MTR_1g029650 35.674 356 173 14 10 340 78 402 9.43e-46 161
MsG0780037914.01.T01 MTR_4g030760 35.103 339 162 15 12 340 139 429 9.47e-46 162
MsG0780037914.01.T01 MTR_7g056170 35.657 373 150 10 11 340 133 458 1.52e-44 159
MsG0780037914.01.T01 MTR_6g017270 62.698 126 43 2 219 340 214 339 8.36e-44 154
MsG0780037914.01.T01 MTR_6g017270 43.972 141 71 4 15 151 76 212 3.98e-27 110
MsG0780037914.01.T01 MTR_7g078960 36.859 312 146 10 53 340 1 285 3.95e-43 151
MsG0780037914.01.T01 MTR_7g061940 38.824 255 121 9 65 312 40 266 4.80e-43 150
MsG0780037914.01.T01 MTR_1g015740 34.203 345 119 10 10 340 75 325 4.49e-42 149
MsG0780037914.01.T01 MTR_6g081280 37.549 253 121 7 95 340 17 239 5.02e-42 147
MsG0780037914.01.T01 MTR_7g445750 37.548 261 135 8 10 255 84 331 7.56e-42 149
MsG0780037914.01.T01 MTR_7g058630 47.742 155 78 2 186 340 27 178 3.81e-41 142
MsG0780037914.01.T01 MTR_7g066010 36.207 348 140 19 12 340 84 368 1.05e-40 147
MsG0780037914.01.T01 MTR_4g037465 33.626 342 186 12 9 340 82 392 2.20e-40 147
MsG0780037914.01.T01 MTR_4g020000 41.277 235 105 10 95 320 112 322 3.21e-40 145
MsG0780037914.01.T01 MTR_7g070440 33.443 305 164 8 46 340 95 370 5.80e-40 145
MsG0780037914.01.T01 MTR_2g017720 42.449 245 103 10 100 337 83 296 1.13e-39 145
MsG0780037914.01.T01 MTR_2g010935 38.174 241 113 7 101 340 43 248 1.42e-39 140
MsG0780037914.01.T01 MTR_1g097560 32.353 306 147 12 17 319 105 353 8.09e-39 142
MsG0780037914.01.T01 MTR_6g042600 48.408 157 67 3 188 337 171 320 7.53e-38 140
MsG0780037914.01.T01 MTR_6g042600 53.030 66 26 2 46 110 109 170 1.34e-11 65.9
MsG0780037914.01.T01 MTR_7g037670 33.133 332 143 11 14 340 74 331 7.76e-38 138
MsG0780037914.01.T01 MTR_8g030630 36.948 249 136 7 82 320 1 238 9.58e-38 140
MsG0780037914.01.T01 MTR_8g030630 41.294 201 83 5 120 319 274 440 3.27e-36 136
MsG0780037914.01.T01 MTR_4g128320 36.667 270 117 10 64 324 37 261 2.31e-37 135
MsG0780037914.01.T01 MTR_2g060555 35.252 278 117 8 72 333 49 279 2.74e-37 135
MsG0780037914.01.T01 MTR_7g078880 37.447 235 103 5 123 338 102 311 1.78e-36 136
MsG0780037914.01.T01 MTR_5g069950 39.423 208 84 6 69 272 34 203 1.27e-35 129
MsG0780037914.01.T01 MTR_7g056023 37.931 232 118 7 24 248 66 278 2.90e-35 130
MsG0780037914.01.T01 MTR_2g046900 31.231 333 182 11 12 340 94 383 4.35e-35 132
MsG0780037914.01.T01 MTR_7g056793 33.213 277 106 9 79 340 18 230 9.51e-35 127
MsG0780037914.01.T01 MTR_2g027820 46.067 178 85 3 169 340 127 299 1.37e-34 129
MsG0780037914.01.T01 MTR_7g006360 55.645 124 46 3 218 340 159 274 6.80e-34 127
MsG0780037914.01.T01 MTR_1g047490 33.579 271 101 9 12 257 81 297 8.70e-33 124
MsG0780037914.01.T01 MTR_2g021150 33.000 300 153 13 45 340 112 367 1.18e-32 125
MsG0780037914.01.T01 MTR_6g048150 60.204 98 29 2 246 338 13 105 3.42e-31 115
MsG0780037914.01.T01 MTR_6g007135 29.450 309 182 11 35 340 113 388 5.54e-31 121
MsG0780037914.01.T01 MTR_1g097490 31.212 330 159 15 3 328 109 374 6.88e-30 118
MsG0780037914.01.T01 MTR_7g070900 38.249 217 86 9 62 270 201 377 1.17e-29 119
MsG0780037914.01.T01 MTR_1g097330 29.412 323 164 14 9 319 73 343 1.32e-29 118
MsG0780037914.01.T01 MTR_0354s0030 58.511 94 37 1 249 340 1 94 4.72e-29 108
MsG0780037914.01.T01 MTR_3g024130 35.983 239 107 12 45 273 57 259 1.34e-28 113
MsG0780037914.01.T01 MTR_1g050542 32.685 257 133 11 16 269 121 340 2.71e-28 114
MsG0780037914.01.T01 MTR_4g024910 44.828 145 71 3 201 343 130 267 2.85e-28 112
MsG0780037914.01.T01 MTR_4g024910 39.655 116 62 4 7 121 42 150 6.88e-12 66.2
MsG0780037914.01.T01 MTR_2g047832 30.032 313 185 11 12 319 95 378 6.00e-28 113
MsG0780037914.01.T01 MTR_0128s0110 31.982 222 126 5 129 344 4 206 6.62e-28 108
MsG0780037914.01.T01 MTR_7g078940 30.495 364 153 15 4 340 110 400 8.11e-28 112
MsG0780037914.01.T01 MTR_2g046920 28.829 333 182 13 12 340 90 371 1.67e-27 111
MsG0780037914.01.T01 MTR_3g055000 40.845 142 66 2 200 340 1 125 1.97e-27 105
MsG0780037914.01.T01 MTR_4g108820 33.205 259 130 12 18 274 81 298 2.44e-27 110
MsG0780037914.01.T01 MTR_2g046860 30.496 282 154 9 42 319 3 246 4.89e-27 109
MsG0780037914.01.T01 MTR_7g089830 44.286 140 58 4 166 301 6 129 6.43e-27 104
MsG0780037914.01.T01 MTR_2g046830 29.712 313 170 11 10 319 89 354 2.39e-26 108
MsG0780037914.01.T01 MTR_8g101580 28.053 303 164 12 22 318 118 372 3.03e-26 108
MsG0780037914.01.T01 MTR_2g055970 30.530 321 157 14 9 319 275 539 4.13e-26 109
MsG0780037914.01.T01 MTR_2g021190 30.233 301 159 11 46 340 116 371 8.76e-26 107
MsG0780037914.01.T01 MTR_1g054575 31.022 274 142 10 24 293 123 353 1.78e-25 108
MsG0780037914.01.T01 MTR_3g036290 31.933 238 118 7 29 265 100 294 2.17e-25 105
MsG0780037914.01.T01 MTR_2g021252 28.289 304 149 11 45 340 141 383 2.25e-25 105
MsG0780037914.01.T01 MTR_2g029990 30.164 305 152 13 46 340 148 401 2.82e-25 105
MsG0780037914.01.T01 MTR_3g014570 32.000 250 123 9 34 274 114 325 1.65e-24 103
MsG0780037914.01.T01 MTR_2g021155 29.861 288 155 12 47 328 129 375 1.97e-24 105
MsG0780037914.01.T01 MTR_1g094210 28.767 292 147 13 9 295 120 355 3.40e-24 102
MsG0780037914.01.T01 MTR_8g467140 34.934 229 115 11 46 271 126 323 4.29e-24 101
MsG0780037914.01.T01 MTR_1g094210 28.425 292 148 12 9 295 120 355 6.12e-24 102
MsG0780037914.01.T01 MTR_6g007150 27.660 329 199 14 19 340 40 336 6.34e-24 100
MsG0780037914.01.T01 MTR_3g010390 30.370 270 151 9 8 265 92 336 1.26e-23 101
MsG0780037914.01.T01 MTR_2g046800 28.875 329 177 14 20 340 112 391 2.61e-23 100
MsG0780037914.01.T01 MTR_5g022420 28.483 323 171 14 9 325 88 356 2.73e-23 100
MsG0780037914.01.T01 MTR_7g061100 38.384 198 80 8 20 212 63 223 3.33e-23 99.0
MsG0780037914.01.T01 MTR_4g107820 31.250 256 130 12 24 271 107 324 3.77e-23 99.8
MsG0780037914.01.T01 MTR_4g107780 31.250 256 130 12 24 271 107 324 3.77e-23 99.8
MsG0780037914.01.T01 MTR_4g107820 31.250 256 130 12 24 271 107 324 4.40e-23 99.8
MsG0780037914.01.T01 MTR_4g107780 31.250 256 130 12 24 271 107 324 4.71e-23 99.8
MsG0780037914.01.T01 MTR_7g066040 35.556 180 96 7 46 212 25 197 6.61e-23 96.3
MsG0780037914.01.T01 MTR_7g070937 42.857 140 66 5 94 228 10 140 7.30e-23 94.0
MsG0780037914.01.T01 MTR_3g009300 28.526 312 161 14 25 326 83 342 1.49e-22 97.4
MsG0780037914.01.T01 MTR_3g009240 30.464 302 149 14 25 315 110 361 3.30e-22 97.1
MsG0780037914.01.T01 MTR_3g011100 28.571 301 177 10 46 340 332 600 3.53e-22 98.2
MsG0780037914.01.T01 MTR_3g007410 32.867 286 146 12 38 316 136 382 3.87e-22 97.1
MsG0780037914.01.T01 MTR_3g007360 30.132 302 169 10 21 316 117 382 4.31e-22 96.7
MsG0780037914.01.T01 MTR_3g014540 31.325 249 128 11 34 275 114 326 5.31e-22 96.3
MsG0780037914.01.T01 MTR_3g013770 32.143 224 115 8 46 264 132 323 9.14e-22 95.9
MsG0780037914.01.T01 MTR_4g061340 32.099 243 119 10 37 266 108 317 1.22e-21 95.1
MsG0780037914.01.T01 MTR_6g004660 28.097 331 194 15 18 340 85 379 1.28e-21 95.1
MsG0780037914.01.T01 MTR_3g030320 30.802 237 120 8 43 274 40 237 1.34e-21 94.0
MsG0780037914.01.T01 MTR_7g050490 43.609 133 59 3 11 141 70 188 3.45e-21 90.1
MsG0780037914.01.T01 MTR_3g009260 30.145 345 164 19 6 323 84 378 6.38e-21 93.2
MsG0780037914.01.T01 MTR_3g006640 30.165 242 117 11 47 270 19 226 7.96e-21 91.7
MsG0780037914.01.T01 MTR_7g445580 44.248 113 55 2 209 321 42 146 8.29e-21 87.8
MsG0780037914.01.T01 MTR_4g030880 33.750 240 111 9 117 356 39 230 8.70e-21 94.0
MsG0780037914.01.T01 MTR_6g027910 30.303 231 122 7 45 264 108 310 1.88e-20 91.7
MsG0780037914.01.T01 MTR_7g062070 40.310 129 67 5 203 326 75 198 2.45e-20 88.2
MsG0780037914.01.T01 MTR_7g058660 38.889 126 72 3 221 343 91 214 2.54e-20 88.6
MsG0780037914.01.T01 MTR_3g007270 29.958 237 107 12 47 266 151 345 3.19e-20 91.7
MsG0780037914.01.T01 MTR_1g016960 33.645 214 112 8 150 340 48 254 3.22e-20 89.4
MsG0780037914.01.T01 MTR_3g011020 30.952 252 130 9 96 341 157 370 3.27e-20 90.9
MsG0780037914.01.T01 MTR_3g013740 29.289 239 136 7 47 280 148 358 3.43e-20 91.3
MsG0780037914.01.T01 MTR_5g046300 27.948 229 130 10 49 276 100 294 4.04e-20 90.5
MsG0780037914.01.T01 MTR_5g046290 27.948 229 130 10 49 276 100 294 4.04e-20 90.5
MsG0780037914.01.T01 MTR_7g038710 40.146 137 66 4 210 340 20 146 4.63e-20 86.3
MsG0780037914.01.T01 MTR_4g024870 35.673 171 89 5 46 210 142 297 5.17e-20 90.9
MsG0780037914.01.T01 MTR_3g006670 30.396 227 116 9 46 264 144 336 5.23e-20 90.9
MsG0780037914.01.T01 MTR_5g046280 27.511 229 131 10 49 276 3 197 6.51e-20 88.2
MsG0780037914.01.T01 MTR_6g004210 29.183 257 146 11 25 266 105 340 9.33e-20 90.1
MsG0780037914.01.T01 MTR_6g460450 75.000 56 14 0 1 56 83 138 1.75e-19 84.3
MsG0780037914.01.T01 MTR_3g011060 30.864 243 122 11 44 275 128 335 1.84e-19 89.0
MsG0780037914.01.T01 MTR_1g097370 30.380 237 133 11 89 319 126 336 2.64e-19 89.4
MsG0780037914.01.T01 MTR_1g115160 27.090 299 162 12 47 340 118 365 2.71e-19 88.6
MsG0780037914.01.T01 MTR_0044s0300 31.304 230 110 11 44 266 133 321 4.70e-19 87.8
MsG0780037914.01.T01 MTR_3g007430 30.224 268 146 11 9 267 96 331 5.62e-19 87.8
MsG0780037914.01.T01 MTR_7g407070 31.048 248 115 11 42 268 129 341 7.91e-19 87.4
MsG0780037914.01.T01 MTR_7g013590 27.483 302 174 12 46 339 126 390 8.22e-19 87.4
MsG0780037914.01.T01 MTR_3g055070 37.500 136 62 4 200 334 1 114 8.32e-19 82.8
MsG0780037914.01.T01 MTR_5g057790 30.088 226 118 11 47 266 141 332 1.02e-18 87.0
MsG0780037914.01.T01 MTR_5g009060 31.696 224 123 7 47 264 143 342 1.14e-18 87.0
MsG0780037914.01.T01 MTR_2g078870 29.148 223 119 9 47 268 56 240 1.27e-18 85.5
MsG0780037914.01.T01 MTR_5g057710 30.043 233 123 11 40 266 134 332 2.31e-18 85.9
MsG0780037914.01.T01 MTR_5g057690 30.568 229 113 11 42 266 136 322 2.73e-18 85.5
MsG0780037914.01.T01 MTR_7g021580 55.556 90 32 3 251 340 218 299 2.90e-18 84.3
MsG0780037914.01.T01 MTR_5g007610 31.330 233 121 10 46 266 133 338 4.83e-18 85.1
MsG0780037914.01.T01 MTR_3g007330 31.225 253 130 13 29 274 120 335 6.13e-18 84.7
MsG0780037914.01.T01 MTR_2g078900 30.317 221 113 10 49 266 133 315 6.40e-18 84.3
MsG0780037914.01.T01 MTR_6g065980 28.311 219 115 7 47 264 109 286 8.09e-18 84.0
MsG0780037914.01.T01 MTR_6g021880 29.333 225 132 8 46 267 119 319 8.34e-18 84.3
MsG0780037914.01.T01 MTR_5g011200 28.889 225 120 10 46 264 115 305 9.67e-18 84.0
MsG0780037914.01.T01 MTR_3g030350 27.273 308 162 14 28 312 112 380 1.53e-17 83.6
MsG0780037914.01.T01 MTR_1g054725 26.557 305 169 16 46 340 115 374 1.53e-17 83.2
MsG0780037914.01.T01 MTR_3g006530 28.571 308 149 12 47 340 145 395 2.00e-17 83.2
MsG0780037914.01.T01 MTR_6g048120 29.073 313 157 12 48 340 139 406 2.82e-17 82.8
MsG0780037914.01.T01 MTR_4g031770 27.095 358 191 23 6 340 57 367 3.44e-17 82.4
MsG0780037914.01.T01 MTR_3g083640 25.872 344 198 12 2 340 110 401 5.91e-17 82.0
MsG0780037914.01.T01 MTR_4g055060 31.513 238 123 12 45 274 124 329 9.45e-17 81.3
MsG0780037914.01.T01 MTR_2g435950 29.667 300 156 15 46 340 46 295 1.05e-16 80.1
MsG0780037914.01.T01 MTR_3g010590 27.240 279 146 10 70 340 155 384 1.63e-16 80.5
MsG0780037914.01.T01 MTR_6g027890 33.333 174 89 6 96 266 113 262 1.71e-16 79.7
MsG0780037914.01.T01 MTR_7g061130 53.125 96 36 3 249 342 1 89 1.79e-16 74.3
MsG0780037914.01.T01 MTR_3g009310 30.531 226 113 10 47 265 139 327 2.81e-16 79.7
MsG0780037914.01.T01 MTR_2g078850 30.222 225 115 11 47 266 128 315 2.99e-16 79.3
MsG0780037914.01.T01 MTR_6g053260 32.035 231 111 14 45 266 433 626 3.57e-16 80.1
MsG0780037914.01.T01 MTR_6g048140 27.798 277 142 12 29 299 130 354 4.03e-16 79.3
MsG0780037914.01.T01 MTR_3g436150 28.512 242 130 11 39 268 125 335 5.82e-16 79.0
MsG0780037914.01.T01 MTR_4g108810 31.351 185 102 7 141 316 42 210 6.38e-16 76.6
MsG0780037914.01.T01 MTR_7g007300 25.987 304 156 13 45 340 202 444 6.96e-16 79.0
MsG0780037914.01.T01 MTR_3g024110 27.602 221 118 8 47 266 200 379 8.63e-16 78.6
MsG0780037914.01.T01 MTR_3g006570 27.928 222 124 9 49 266 118 307 9.07e-16 78.2
MsG0780037914.01.T01 MTR_1g097510 30.055 183 98 6 131 312 91 244 9.61e-16 77.0
MsG0780037914.01.T01 MTR_2g028160 24.731 279 162 9 47 310 105 350 1.14e-15 78.2
MsG0780037914.01.T01 MTR_4g023070 28.986 276 151 12 46 312 96 335 1.71e-15 77.4
MsG0780037914.01.T01 MTR_1g068835 22.318 233 141 7 45 265 88 292 1.95e-15 77.0
MsG0780037914.01.T01 MTR_7g060930 48.438 64 33 0 189 252 15 78 2.01e-15 70.9
MsG0780037914.01.T01 MTR_2g028130 23.607 305 180 12 16 300 70 341 2.05e-15 77.4
MsG0780037914.01.T01 MTR_6g053240 28.287 251 149 10 21 266 98 322 2.52e-15 77.0
MsG0780037914.01.T01 MTR_7g056727 42.636 129 56 6 11 128 24 145 3.85e-15 74.3
MsG0780037914.01.T01 MTR_5g057020 29.694 229 110 11 42 266 136 317 4.01e-15 75.9
MsG0780037914.01.T01 MTR_1g055375 26.299 308 171 14 44 340 103 365 6.18e-15 75.5
MsG0780037914.01.T01 MTR_4g023120 28.623 276 152 12 46 312 96 335 9.22e-15 75.1
MsG0780037914.01.T01 MTR_3g007300 28.889 225 105 9 46 266 131 304 9.84e-15 75.1
MsG0780037914.01.T01 MTR_7g066830 45.000 100 41 4 46 145 95 180 1.08e-14 72.0
MsG0780037914.01.T01 MTR_1g046600 55.072 69 31 0 244 312 238 306 1.76e-14 73.6
MsG0780037914.01.T01 MTR_7g056723 34.868 152 69 5 32 178 22 148 2.08e-14 70.9
MsG0780037914.01.T01 MTR_2g026010 23.734 316 172 10 6 304 64 327 2.18e-14 74.3
MsG0780037914.01.T01 MTR_4g133170 22.472 267 154 10 46 299 88 314 2.46e-14 73.9
MsG0780037914.01.T01 MTR_3g083660 32.597 181 83 7 90 266 67 212 2.49e-14 72.8
MsG0780037914.01.T01 MTR_8g062660 28.936 235 100 9 48 258 118 309 3.04e-14 74.3
MsG0780037914.01.T01 MTR_0760s0010 24.749 299 167 12 45 340 145 388 3.07e-14 73.6
MsG0780037914.01.T01 MTR_1g113900 28.807 243 128 9 100 340 45 244 3.44e-14 72.0
MsG0780037914.01.T01 MTR_3g010520 25.253 297 157 11 49 340 122 358 3.63e-14 73.2
MsG0780037914.01.T01 MTR_4g132560 27.234 235 127 9 93 318 35 234 5.34e-14 71.6
MsG0780037914.01.T01 MTR_2g025960 21.324 272 166 8 45 300 2 241 5.40e-14 72.4
MsG0780037914.01.T01 MTR_5g046260 26.068 234 110 9 39 270 87 259 8.66e-14 71.6
MsG0780037914.01.T01 MTR_1g114650 28.740 254 124 13 89 340 16 214 8.75e-14 70.5
MsG0780037914.01.T01 MTR_1004s0010 24.415 299 168 12 45 340 115 358 1.19e-13 71.6
MsG0780037914.01.T01 MTR_3g030240 27.092 251 124 10 94 340 181 376 1.30e-13 71.6
MsG0780037914.01.T01 MTR_1g058190 29.714 175 102 7 96 266 149 306 1.31e-13 71.6
MsG0780037914.01.T01 MTR_3g030250 24.595 309 159 13 40 340 136 378 1.39e-13 71.6
MsG0780037914.01.T01 MTR_2g426090 20.307 261 172 5 21 264 69 310 2.32e-13 71.2
MsG0780037914.01.T01 MTR_1g097520 31.214 173 82 9 46 214 5 144 2.42e-13 67.8
MsG0780037914.01.T01 MTR_3g007390 32.184 174 85 7 96 265 2 146 2.99e-13 68.6
MsG0780037914.01.T01 MTR_1g068860 20.543 258 165 7 21 265 64 294 3.17e-13 70.5
MsG0780037914.01.T01 MTR_7g079370 27.490 251 140 11 27 265 67 287 4.72e-13 69.7
MsG0780037914.01.T01 MTR_1g115185 34.118 170 81 7 96 264 187 326 9.30e-13 69.3
MsG0780037914.01.T01 MTR_3g058470 26.070 257 120 9 46 299 139 328 1.36e-12 68.6
MsG0780037914.01.T01 MTR_2g031680 22.069 290 174 10 46 322 89 339 2.61e-12 67.8
MsG0780037914.01.T01 MTR_8g030660 30.952 168 80 7 11 146 87 250 2.90e-12 66.6
MsG0780037914.01.T01 MTR_2g024110 21.543 311 181 12 48 341 93 357 3.14e-12 67.4
MsG0780037914.01.T01 MTR_7g017130 28.261 230 125 10 48 261 124 329 5.48e-12 67.0
MsG0780037914.01.T01 MTR_3g010430 27.232 224 125 9 49 266 133 324 5.70e-12 67.0
MsG0780037914.01.T01 MTR_7g017170 28.261 230 125 10 48 261 124 329 5.79e-12 67.0
MsG0780037914.01.T01 MTR_2g028140 23.134 268 164 10 17 264 76 321 8.07e-12 66.6
MsG0780037914.01.T01 MTR_4g070550 22.269 238 145 9 46 264 99 315 8.45e-12 66.2
MsG0780037914.01.T01 MTR_2g426070 19.620 316 208 11 20 322 78 360 1.25e-11 65.9
MsG0780037914.01.T01 MTR_4g023090 26.908 249 141 9 46 285 110 326 1.42e-11 65.5
MsG0780037914.01.T01 MTR_1g055065 25.243 309 175 14 47 340 19 286 1.96e-11 64.3
MsG0780037914.01.T01 MTR_4g006840 32.222 180 69 9 37 207 82 217 2.74e-11 63.2
MsG0780037914.01.T01 MTR_6g060650 27.106 273 138 11 35 298 104 324 2.82e-11 64.7
MsG0780037914.01.T01 MTR_3g030330 28.319 226 118 12 46 270 118 300 3.22e-11 64.3
MsG0780037914.01.T01 MTR_4g023080 27.126 247 134 8 46 285 102 309 3.58e-11 64.3
MsG0780037914.01.T01 MTR_6g014720 28.889 225 118 10 45 264 113 300 4.11e-11 63.9
MsG0780037914.01.T01 MTR_3g009290 31.088 193 85 9 25 207 103 257 4.26e-11 63.2
MsG0780037914.01.T01 MTR_5g096910 24.823 282 159 12 48 321 131 367 5.61e-11 63.9
MsG0780037914.01.T01 MTR_2g025420 21.631 282 157 10 46 300 104 348 6.91e-11 63.5
MsG0780037914.01.T01 MTR_4g021785 26.522 230 131 9 46 273 102 295 8.39e-11 63.2
MsG0780037914.01.T01 MTR_0667s0010 19.928 276 167 8 45 300 91 332 8.41e-11 63.2
MsG0780037914.01.T01 MTR_8g054320 25.541 231 120 9 44 266 53 239 9.43e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037914.01.T01 AT4G12560 26.300 327 197 12 26 340 74 368 4.75e-21 94.0
MsG0780037914.01.T01 AT4G12560 26.300 327 197 12 26 340 74 368 4.75e-21 94.0
MsG0780037914.01.T01 AT4G12560 26.300 327 197 12 26 340 74 368 4.75e-21 94.0
MsG0780037914.01.T01 AT3G23880 26.991 226 122 8 46 264 112 301 8.88e-13 69.3
MsG0780037914.01.T01 AT3G06240 25.649 308 162 15 46 340 165 418 1.57e-12 68.6
MsG0780037914.01.T01 AT3G07870 28.975 283 140 16 46 299 119 369 8.43e-12 66.6

Find 65 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGCACTGGTTCTGTTTC+TGG 0.115004 7:+36307671 MsG0780037914.01.T01:CDS
TCACATGGACAACGGATATT+TGG 0.116964 7:+36307471 None:intergenic
TCACTTTGGGTGATAATATT+TGG 0.173469 7:+36307866 MsG0780037914.01.T01:CDS
GTTTCATCATCGTTGTTATT+TGG 0.238794 7:+36307921 MsG0780037914.01.T01:CDS
ATATGGCAAATGAAGGAATT+TGG 0.255945 7:+36308210 MsG0780037914.01.T01:CDS
TTGAATGTACCTATAGAATT+TGG 0.262313 7:+36308436 MsG0780037914.01.T01:CDS
CATCTCAGTGAGTCGTTTAC+TGG 0.272966 7:+36307516 MsG0780037914.01.T01:CDS
AAATTGCTTGGTCTCCTCTA+TGG 0.285847 7:-36308380 None:intergenic
GGATCTTCAACATCTGTTAT+AGG 0.314301 7:-36307553 None:intergenic
TCGAACTCTTTGTGTGTTGA+TGG 0.316384 7:+36308143 MsG0780037914.01.T01:CDS
ACAACGTCAAAGTCTGTTTC+TGG 0.326708 7:+36307703 MsG0780037914.01.T01:CDS
CACATGGACAACGGATATTT+GGG 0.335789 7:+36307472 None:intergenic
AAATGTCCACGCTTAGGTTT+GGG 0.350194 7:+36307743 MsG0780037914.01.T01:CDS
TGTGATTATCTCGCTTGATT+TGG 0.359092 7:+36308059 MsG0780037914.01.T01:CDS
CAAATGTCCACGCTTAGGTT+TGG 0.383544 7:+36307742 MsG0780037914.01.T01:CDS
AAAAGGAACTTACTTTCAAC+AGG 0.391176 7:-36308504 None:intergenic
TCTTACCATCACCACCTTGT+AGG 0.422233 7:-36307791 None:intergenic
TGTCACTGCCGCGGGATTGT+TGG 0.432891 7:+36307595 MsG0780037914.01.T01:CDS
TCAGAATTATGTTGAAAGCT+TGG 0.442034 7:+36308470 MsG0780037914.01.T01:CDS
TCCACGCTTAGGTTTGGGTT+CGG 0.443021 7:+36307748 MsG0780037914.01.T01:CDS
TCCATTGTGTCTTTCTGAGA+AGG 0.453056 7:+36308335 MsG0780037914.01.T01:CDS
ACTATACCACCAAATTCTAT+AGG 0.455768 7:-36308445 None:intergenic
TGTTATTTGGTTGAATTTCG+TGG 0.455899 7:+36307934 MsG0780037914.01.T01:CDS
CAACGTCAAAGTCTGTTTCT+GGG 0.468462 7:+36307704 MsG0780037914.01.T01:CDS
ATTATGTTGAAAGCTTGGTT+TGG 0.471758 7:+36308475 MsG0780037914.01.T01:CDS
ATGATCAAATGTCCACGCTT+AGG 0.473668 7:+36307737 MsG0780037914.01.T01:CDS
AACAATCCCGCGGCAGTGAC+AGG 0.477325 7:-36307593 None:intergenic
ACAGACTTTGACGTTGTGGC+AGG 0.478479 7:-36307697 None:intergenic
TGATGGTGACGATGGAGGTC+AGG 0.480109 7:+36307822 MsG0780037914.01.T01:CDS
ATTTAAGTAATAGTATTAGT+TGG 0.484849 7:+36307983 MsG0780037914.01.T01:CDS
TCCAATTATAGAAAATTGCT+TGG 0.490233 7:-36308392 None:intergenic
GGCAGTGACAGGCATGGAAT+CGG 0.491008 7:-36307582 None:intergenic
CCATTGTGTCTTTCTGAGAA+GGG 0.492815 7:+36308336 MsG0780037914.01.T01:CDS
GGGATTGTTGGTTCATGCAA+TGG 0.501220 7:+36307607 MsG0780037914.01.T01:CDS
AAACAAGTAAATCATTGAAA+AGG 0.506975 7:-36308521 None:intergenic
AATTTGGAGTTGAAGAGTCA+TGG 0.515584 7:+36308226 MsG0780037914.01.T01:CDS
TGTGGATTATGTTGGTCGAT+TGG 0.517838 7:+36308311 MsG0780037914.01.T01:CDS
CAGGCATGGAATCGGCAGTA+AGG 0.525927 7:-36307574 None:intergenic
AATGTACCTATAGAATTTGG+TGG 0.531895 7:+36308439 MsG0780037914.01.T01:CDS
TTCCATGCCTGTCACTGCCG+CGG 0.533730 7:+36307586 MsG0780037914.01.T01:CDS
GTCAGCGTTATAATTGTCAT+CGG 0.536204 7:+36308013 MsG0780037914.01.T01:CDS
GAAATTCATCACAACATTGA+GGG 0.540147 7:-36308110 None:intergenic
AGTAAACGACTCACTGAGAT+GGG 0.540699 7:-36307514 None:intergenic
TGATGAAACACTACTTGCAC+GGG 0.547863 7:-36307907 None:intergenic
CAGTAAACGACTCACTGAGA+TGG 0.547919 7:-36307515 None:intergenic
TCCATGCCTGTCACTGCCGC+GGG 0.553806 7:+36307587 MsG0780037914.01.T01:CDS
GGAAATTCATCACAACATTG+AGG 0.563077 7:-36308111 None:intergenic
TAAACTTCGTGAGTGGAATG+TGG 0.574939 7:+36308293 MsG0780037914.01.T01:CDS
ATGATGAAACACTACTTGCA+CGG 0.580784 7:-36307908 None:intergenic
AGACACCTACAAGGTGGTGA+TGG 0.585741 7:+36307786 MsG0780037914.01.T01:CDS
ACAGTAGTTATGAAGAGCAC+TGG 0.588775 7:+36307659 MsG0780037914.01.T01:CDS
CAGACTTTGACGTTGTGGCA+GGG 0.589451 7:-36307696 None:intergenic
CTGATTATAAACTTCGTGAG+TGG 0.593735 7:+36308286 MsG0780037914.01.T01:CDS
TCCCGCGGCAGTGACAGGCA+TGG 0.600514 7:-36307588 None:intergenic
TCTACTGATGGTGACGATGG+AGG 0.600749 7:+36307817 MsG0780037914.01.T01:CDS
AGAAACAGACTTTGACGTTG+TGG 0.613884 7:-36307701 None:intergenic
CTGATATTGACAATCCATAG+AGG 0.619203 7:+36308366 MsG0780037914.01.T01:CDS
TAATTCAACAGACACCTACA+AGG 0.634034 7:+36307777 MsG0780037914.01.T01:CDS
GAGTGGAATGTGGATTATGT+TGG 0.636757 7:+36308303 MsG0780037914.01.T01:CDS
CTCGCAATTCACATGGACAA+CGG 0.643289 7:+36307463 None:intergenic
ACCGAACCCAAACCTAAGCG+TGG 0.648684 7:-36307749 None:intergenic
CCCTTCTCAGAAAGACACAA+TGG 0.657045 7:-36308336 None:intergenic
GGTCGTTTAGATGAATACGC+AGG 0.713233 7:+36307955 MsG0780037914.01.T01:CDS
TGCATGAACCAACAATCCCG+CGG 0.715163 7:-36307603 None:intergenic
TTCAACAGACACCTACAAGG+TGG 0.745131 7:+36307780 MsG0780037914.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAGTAATAGTATTAGT+TGG + Chr7:36307983-36308002 MsG0780037914.01.T01:CDS 15.0%
!!! AAAAAACTCATTTTGTTATA+TGG + Chr7:36308193-36308212 MsG0780037914.01.T01:CDS 15.0%
!! AAACAAGTAAATCATTGAAA+AGG - Chr7:36308524-36308543 None:intergenic 20.0%
!!! GATTCTGATAACTAATTTTA+AGG - Chr7:36308260-36308279 None:intergenic 20.0%
! TCCAATTATAGAAAATTGCT+TGG - Chr7:36308395-36308414 None:intergenic 25.0%
! TTGAATGTACCTATAGAATT+TGG + Chr7:36308436-36308455 MsG0780037914.01.T01:CDS 25.0%
!! ACCAAGCAATTTTCTATAAT+TGG + Chr7:36308391-36308410 MsG0780037914.01.T01:CDS 25.0%
!! ATTGTCAAAGTTTTCACTTT+GGG + Chr7:36307853-36307872 MsG0780037914.01.T01:CDS 25.0%
!!! TTTTGTTATATGGCAAATGA+AGG + Chr7:36308203-36308222 MsG0780037914.01.T01:CDS 25.0%
AAAAGGAACTTACTTTCAAC+AGG - Chr7:36308507-36308526 None:intergenic 30.0%
AATGTACCTATAGAATTTGG+TGG + Chr7:36308439-36308458 MsG0780037914.01.T01:CDS 30.0%
ACTATACCACCAAATTCTAT+AGG - Chr7:36308448-36308467 None:intergenic 30.0%
ATATGGCAAATGAAGGAATT+TGG + Chr7:36308210-36308229 MsG0780037914.01.T01:CDS 30.0%
ATTATGTTGAAAGCTTGGTT+TGG + Chr7:36308475-36308494 MsG0780037914.01.T01:CDS 30.0%
GAAATTCATCACAACATTGA+GGG - Chr7:36308113-36308132 None:intergenic 30.0%
TCACTTTGGGTGATAATATT+TGG + Chr7:36307866-36307885 MsG0780037914.01.T01:CDS 30.0%
TCAGAATTATGTTGAAAGCT+TGG + Chr7:36308470-36308489 MsG0780037914.01.T01:CDS 30.0%
! ATGGTAAGATTTTCTACTGA+TGG + Chr7:36307805-36307824 MsG0780037914.01.T01:CDS 30.0%
! CATTGTCAAAGTTTTCACTT+TGG + Chr7:36307852-36307871 MsG0780037914.01.T01:CDS 30.0%
! GTTTCATCATCGTTGTTATT+TGG + Chr7:36307921-36307940 MsG0780037914.01.T01:CDS 30.0%
! TGTTATTTGGTTGAATTTCG+TGG + Chr7:36307934-36307953 MsG0780037914.01.T01:CDS 30.0%
ATGATGAAACACTACTTGCA+CGG - Chr7:36307911-36307930 None:intergenic 35.0%
CTGATATTGACAATCCATAG+AGG + Chr7:36308366-36308385 MsG0780037914.01.T01:CDS 35.0%
CTGATTATAAACTTCGTGAG+TGG + Chr7:36308286-36308305 MsG0780037914.01.T01:CDS 35.0%
GGAAATTCATCACAACATTG+AGG - Chr7:36308114-36308133 None:intergenic 35.0%
GGATCTTCAACATCTGTTAT+AGG - Chr7:36307556-36307575 None:intergenic 35.0%
GTCAGCGTTATAATTGTCAT+CGG + Chr7:36308013-36308032 MsG0780037914.01.T01:CDS 35.0%
TAATTCAACAGACACCTACA+AGG + Chr7:36307777-36307796 MsG0780037914.01.T01:CDS 35.0%
TGTGATTATCTCGCTTGATT+TGG + Chr7:36308059-36308078 MsG0780037914.01.T01:CDS 35.0%
! AATTTGGAGTTGAAGAGTCA+TGG + Chr7:36308226-36308245 MsG0780037914.01.T01:CDS 35.0%
!! CAAAGAGTTCGATTTTCAAG+TGG - Chr7:36308135-36308154 None:intergenic 35.0%
AAATGTCCACGCTTAGGTTT+GGG + Chr7:36307743-36307762 MsG0780037914.01.T01:CDS 40.0%
AAATTGCTTGGTCTCCTCTA+TGG - Chr7:36308383-36308402 None:intergenic 40.0%
ACAACGTCAAAGTCTGTTTC+TGG + Chr7:36307703-36307722 MsG0780037914.01.T01:CDS 40.0%
AGAAACAGACTTTGACGTTG+TGG - Chr7:36307704-36307723 None:intergenic 40.0%
AGTAAACGACTCACTGAGAT+GGG - Chr7:36307517-36307536 None:intergenic 40.0%
ATGATCAAATGTCCACGCTT+AGG + Chr7:36307737-36307756 MsG0780037914.01.T01:CDS 40.0%
TAAACTTCGTGAGTGGAATG+TGG + Chr7:36308293-36308312 MsG0780037914.01.T01:CDS 40.0%
TCGAACTCTTTGTGTGTTGA+TGG + Chr7:36308143-36308162 MsG0780037914.01.T01:CDS 40.0%
TGATGAAACACTACTTGCAC+GGG - Chr7:36307910-36307929 None:intergenic 40.0%
! ACAGTAGTTATGAAGAGCAC+TGG + Chr7:36307659-36307678 MsG0780037914.01.T01:CDS 40.0%
! CAACGTCAAAGTCTGTTTCT+GGG + Chr7:36307704-36307723 MsG0780037914.01.T01:CDS 40.0%
! CCATTGTGTCTTTCTGAGAA+GGG + Chr7:36308336-36308355 MsG0780037914.01.T01:CDS 40.0%
! GAGTGGAATGTGGATTATGT+TGG + Chr7:36308303-36308322 MsG0780037914.01.T01:CDS 40.0%
! TCCATTGTGTCTTTCTGAGA+AGG + Chr7:36308335-36308354 MsG0780037914.01.T01:CDS 40.0%
! TGTGGATTATGTTGGTCGAT+TGG + Chr7:36308311-36308330 MsG0780037914.01.T01:CDS 40.0%
!! TTTTCTACTGATGGTGACGA+TGG + Chr7:36307814-36307833 MsG0780037914.01.T01:CDS 40.0%
CAAATGTCCACGCTTAGGTT+TGG + Chr7:36307742-36307761 MsG0780037914.01.T01:CDS 45.0%
CAGTAAACGACTCACTGAGA+TGG - Chr7:36307518-36307537 None:intergenic 45.0%
CATCTCAGTGAGTCGTTTAC+TGG + Chr7:36307516-36307535 MsG0780037914.01.T01:CDS 45.0%
CCCTTCTCAGAAAGACACAA+TGG - Chr7:36308339-36308358 None:intergenic 45.0%
GGTCGTTTAGATGAATACGC+AGG + Chr7:36307955-36307974 MsG0780037914.01.T01:CDS 45.0%
TCTTACCATCACCACCTTGT+AGG - Chr7:36307794-36307813 None:intergenic 45.0%
TTCAACAGACACCTACAAGG+TGG + Chr7:36307780-36307799 MsG0780037914.01.T01:CDS 45.0%
!! AAGAGCACTGGTTCTGTTTC+TGG + Chr7:36307671-36307690 MsG0780037914.01.T01:CDS 45.0%
!! GGGATTGTTGGTTCATGCAA+TGG + Chr7:36307607-36307626 MsG0780037914.01.T01:CDS 45.0%
ACAGACTTTGACGTTGTGGC+AGG - Chr7:36307700-36307719 None:intergenic 50.0%
AGACACCTACAAGGTGGTGA+TGG + Chr7:36307786-36307805 MsG0780037914.01.T01:CDS 50.0%
CAGACTTTGACGTTGTGGCA+GGG - Chr7:36307699-36307718 None:intergenic 50.0%
TGCATGAACCAACAATCCCG+CGG - Chr7:36307606-36307625 None:intergenic 50.0%
! TCCACGCTTAGGTTTGGGTT+CGG + Chr7:36307748-36307767 MsG0780037914.01.T01:CDS 50.0%
! TCTACTGATGGTGACGATGG+AGG + Chr7:36307817-36307836 MsG0780037914.01.T01:CDS 50.0%
ACCGAACCCAAACCTAAGCG+TGG - Chr7:36307752-36307771 None:intergenic 55.0%
CAGGCATGGAATCGGCAGTA+AGG - Chr7:36307577-36307596 None:intergenic 55.0%
GGCAGTGACAGGCATGGAAT+CGG - Chr7:36307585-36307604 None:intergenic 55.0%
! TGATGGTGACGATGGAGGTC+AGG + Chr7:36307822-36307841 MsG0780037914.01.T01:CDS 55.0%
AACAATCCCGCGGCAGTGAC+AGG - Chr7:36307596-36307615 None:intergenic 60.0%
TGTCACTGCCGCGGGATTGT+TGG + Chr7:36307595-36307614 MsG0780037914.01.T01:CDS 60.0%
TTCCATGCCTGTCACTGCCG+CGG + Chr7:36307586-36307605 MsG0780037914.01.T01:CDS 60.0%
TCCATGCCTGTCACTGCCGC+GGG + Chr7:36307587-36307606 MsG0780037914.01.T01:CDS 65.0%
TCCCGCGGCAGTGACAGGCA+TGG - Chr7:36307591-36307610 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 36307475 36308545 36307475 ID=MsG0780037914.01;Name=MsG0780037914.01
Chr7 mRNA 36307475 36308545 36307475 ID=MsG0780037914.01.T01;Parent=MsG0780037914.01;Name=MsG0780037914.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|356
Chr7 exon 36307475 36308545 36307475 ID=MsG0780037914.01.T01:exon:10339;Parent=MsG0780037914.01.T01
Chr7 CDS 36307475 36308545 36307475 ID=MsG0780037914.01.T01:cds;Parent=MsG0780037914.01.T01
Gene Sequence

>MsG0780037914.01.T01

ATGGACAACGGATATTTGGGATATACATATACTGTTGCACCCATCTCAGTGAGTCGTTTACTGGAGAGCATGTCGAATCCTATAACAGATGTTGAAGATCCTTACTGCCGATTCCATGCCTGTCACTGCCGCGGGATTGTTGGTTCATGCAATGGATTGATCTGTTTGCACAGTTATATTTACTACAGTAGTTATGAAGAGCACTGGTTCTGTTTCTGGAACCCTGCCACAACGTCAAAGTCTGTTTCTGGGTCTTTTCACTATGATCAAATGTCCACGCTTAGGTTTGGGTTCGGTTATGATAATTCAACAGACACCTACAAGGTGGTGATGGTAAGATTTTCTACTGATGGTGACGATGGAGGTCAGGTTAGAAACATTGTCAAAGTTTTCACTTTGGGTGATAATATTTGGAGAGAAATTGAAAGTTTTCCCGTGCAAGTAGTGTTTCATCATCGTTGTTATTTGGTTGAATTTCGTGGTCGTTTAGATGAATACGCAGGTGTGTATTTAAGTAATAGTATTAGTTGGTTGATTTGTCAGCGTTATAATTGTCATCGGAATAATATTATAATCGAGCAATTTGTGATTATCTCGCTTGATTTGGCGTCAGAGACATACACACAGTTGTTACTCCCTCAATGTTGTGATGAATTTCCACTTGAAAATCGAACTCTTTGTGTGTTGATGGATTGTATTTGTTTTTCTCATGATTTTAAAAAAACTCATTTTGTTATATGGCAAATGAAGGAATTTGGAGTTGAAGAGTCATGGACTCAATTCCTTAAAATTAGTTATCAGAATCTTCAAACTGATTATAAACTTCGTGAGTGGAATGTGGATTATGTTGGTCGATTGGTTCCATTGTGTCTTTCTGAGAAGGGCGATACACTGATATTGACAATCCATAGAGGAGACCAAGCAATTTTCTATAATTGGAGAGATAATAGACTAAATAGAATTGAATGTACCTATAGAATTTGGTGGTATAGTGCTCAGAATTATGTTGAAAGCTTGGTTTGGTATCAACCTGTTGAAAGTAAGTTCCTTTTCAATGATTTACTTGTTTGA
Protein sequence

>MsG0780037914.01.T01

MDNGYLGYTYTVAPISVSRLLESMSNPITDVEDPYCRFHACHCRGIVGSCNGLICLHSYIYYSSYEEHWFCFWNPATTSKSVSGSFHYDQMSTLRFGFGYDNSTDTYKVVMVRFSTDGDDGGQVRNIVKVFTLGDNIWREIESFPVQVVFHHRCYLVEFRGRLDEYAGVYLSNSISWLICQRYNCHRNNIIIEQFVIISLDLASETYTQLLLPQCCDEFPLENRTLCVLMDCICFSHDFKKTHFVIWQMKEFGVEESWTQFLKISYQNLQTDYKLREWNVDYVGRLVPLCLSEKGDTLILTIHRGDQAIFYNWRDNRLNRIECTYRIWWYSAQNYVESLVWYQPVESKFLFNDLLV*