Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033237.01.T02 | AES75523.1 | 85.256 | 312 | 41 | 1 | 1 | 307 | 1 | 312 | 0 | 546 |
| MsG0680033237.01.T01 | AES75523.1 | 81.41 | 312 | 40 | 1 | 1 | 294 | 1 | 312 | 0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033237.01.T01 | Q8GXC7 | 25.685 | 292 | 163 | 11 | 38 | 295 | 35 | 306 | 2.33E-15 | 79.7 |
| MsG0680033237.01.T02 | Q8GXC7 | 26.531 | 294 | 171 | 12 | 38 | 308 | 35 | 306 | 4.68E-16 | 82 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033237.01.T01 | G7KKI7 | 81.410 | 312 | 40 | 1 | 1 | 294 | 1 | 312 | 0.0 | 518 |
| MsG0680033237.01.T02 | A0A072TEQ8 | 91.379 | 290 | 23 | 2 | 1 | 289 | 1 | 289 | 0.0 | 546 |
| MsG0680033237.01.T02 | G7KKI7 | 85.256 | 312 | 41 | 1 | 1 | 307 | 1 | 312 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033237.01.T02 | MTR_6g046320 | 85.256 | 312 | 41 | 1 | 1 | 307 | 1 | 312 | 0.0 | 546 |
| MsG0680033237.01.T02 | MTR_0627s0010 | 91.379 | 290 | 23 | 2 | 1 | 289 | 1 | 289 | 0.0 | 546 |
| MsG0680033237.01.T02 | MTR_5g021880 | 62.121 | 330 | 97 | 5 | 1 | 307 | 1 | 325 | 4.98e-133 | 387 |
| MsG0680033237.01.T02 | MTR_5g021880 | 62.121 | 330 | 97 | 5 | 1 | 307 | 1 | 325 | 7.65e-133 | 387 |
| MsG0680033237.01.T02 | MTR_5g021880 | 62.121 | 330 | 97 | 5 | 1 | 307 | 1 | 325 | 1.65e-132 | 387 |
| MsG0680033237.01.T02 | MTR_5g021920 | 71.910 | 267 | 65 | 4 | 1 | 257 | 1 | 267 | 2.46e-129 | 371 |
| MsG0680033237.01.T02 | MTR_5g021860 | 62.727 | 330 | 84 | 7 | 1 | 307 | 1 | 314 | 1.22e-126 | 370 |
| MsG0680033237.01.T02 | MTR_5g021860 | 62.727 | 330 | 84 | 7 | 1 | 307 | 1 | 314 | 1.89e-126 | 372 |
| MsG0680033237.01.T02 | MTR_4g027370 | 61.212 | 330 | 89 | 7 | 1 | 307 | 1 | 314 | 8.04e-123 | 363 |
| MsG0680033237.01.T02 | MTR_5g007940 | 58.006 | 331 | 97 | 6 | 1 | 307 | 1 | 313 | 1.82e-115 | 342 |
| MsG0680033237.01.T02 | MTR_5g022040 | 57.186 | 334 | 115 | 6 | 1 | 307 | 1 | 333 | 5.40e-115 | 342 |
| MsG0680033237.01.T02 | MTR_5g010610 | 58.491 | 318 | 111 | 6 | 1 | 307 | 1 | 308 | 1.08e-112 | 338 |
| MsG0680033237.01.T02 | MTR_5g022900 | 55.689 | 334 | 103 | 9 | 1 | 307 | 1 | 316 | 8.09e-108 | 323 |
| MsG0680033237.01.T02 | MTR_5g010550 | 54.572 | 339 | 118 | 8 | 1 | 307 | 1 | 335 | 8.91e-105 | 316 |
| MsG0680033237.01.T02 | MTR_5g010560 | 57.003 | 307 | 112 | 7 | 15 | 307 | 19 | 319 | 1.78e-102 | 309 |
| MsG0680033237.01.T02 | MTR_5g010550 | 57.329 | 307 | 113 | 7 | 15 | 307 | 19 | 321 | 3.51e-102 | 308 |
| MsG0680033237.01.T02 | MTR_5g022045 | 56.090 | 312 | 112 | 7 | 1 | 307 | 1 | 292 | 3.26e-100 | 303 |
| MsG0680033237.01.T02 | MTR_5g022750 | 51.780 | 309 | 102 | 5 | 1 | 307 | 1 | 264 | 9.61e-91 | 278 |
| MsG0680033237.01.T02 | MTR_7g090810 | 52.469 | 324 | 102 | 9 | 1 | 307 | 1 | 289 | 1.51e-90 | 277 |
| MsG0680033237.01.T02 | MTR_5g010660 | 49.226 | 323 | 98 | 7 | 1 | 313 | 1 | 267 | 1.32e-84 | 263 |
| MsG0680033237.01.T02 | MTR_7g117100 | 60.000 | 230 | 64 | 5 | 101 | 307 | 1 | 225 | 9.62e-84 | 254 |
| MsG0680033237.01.T02 | MTR_7g117100 | 60.000 | 230 | 64 | 5 | 101 | 307 | 1 | 225 | 5.83e-83 | 256 |
| MsG0680033237.01.T02 | MTR_5g022090 | 50.000 | 312 | 89 | 10 | 1 | 307 | 1 | 250 | 4.67e-82 | 254 |
| MsG0680033237.01.T02 | MTR_5g027370 | 45.806 | 310 | 139 | 9 | 1 | 307 | 1 | 284 | 1.30e-73 | 234 |
| MsG0680033237.01.T02 | MTR_5g027330 | 45.484 | 310 | 140 | 9 | 1 | 307 | 12 | 295 | 6.25e-73 | 233 |
| MsG0680033237.01.T02 | MTR_7g090810 | 60.000 | 135 | 50 | 3 | 175 | 307 | 13 | 145 | 7.02e-44 | 153 |
| MsG0680033237.01.T02 | MTR_3g463170 | 47.000 | 100 | 53 | 0 | 1 | 100 | 54 | 153 | 3.78e-23 | 94.4 |
| MsG0680033237.01.T02 | MTR_5g074870 | 51.000 | 100 | 49 | 0 | 1 | 100 | 44 | 143 | 9.68e-22 | 90.5 |
| MsG0680033237.01.T02 | MTR_3g006670 | 31.439 | 264 | 141 | 13 | 39 | 297 | 49 | 277 | 8.02e-20 | 90.1 |
| MsG0680033237.01.T02 | MTR_0115s0020 | 28.148 | 270 | 142 | 12 | 39 | 290 | 10 | 245 | 2.10e-19 | 88.6 |
| MsG0680033237.01.T02 | MTR_7g407070 | 27.888 | 251 | 148 | 6 | 39 | 282 | 32 | 256 | 4.52e-18 | 84.7 |
| MsG0680033237.01.T02 | MTR_2g021155 | 30.279 | 251 | 128 | 9 | 39 | 282 | 33 | 243 | 7.07e-18 | 85.1 |
| MsG0680033237.01.T02 | MTR_3g011060 | 26.950 | 282 | 167 | 10 | 39 | 310 | 28 | 280 | 4.83e-17 | 81.6 |
| MsG0680033237.01.T02 | MTR_3g436150 | 29.839 | 248 | 143 | 11 | 39 | 282 | 32 | 252 | 8.56e-17 | 80.9 |
| MsG0680033237.01.T02 | MTR_1g017970 | 38.462 | 169 | 60 | 5 | 1 | 169 | 1 | 125 | 1.46e-16 | 75.5 |
| MsG0680033237.01.T02 | MTR_0064s0160 | 26.510 | 298 | 161 | 12 | 39 | 312 | 42 | 305 | 2.12e-16 | 80.1 |
| MsG0680033237.01.T02 | MTR_4g055060 | 29.134 | 254 | 136 | 9 | 38 | 282 | 29 | 247 | 3.06e-16 | 79.3 |
| MsG0680033237.01.T02 | MTR_3g011100 | 26.667 | 285 | 160 | 11 | 39 | 310 | 235 | 483 | 6.43e-16 | 79.0 |
| MsG0680033237.01.T02 | MTR_3g058480 | 26.756 | 299 | 171 | 11 | 39 | 326 | 39 | 300 | 1.03e-15 | 77.4 |
| MsG0680033237.01.T02 | MTR_3g058440 | 29.391 | 279 | 156 | 13 | 39 | 310 | 35 | 279 | 1.47e-15 | 76.6 |
| MsG0680033237.01.T02 | MTR_3g007430 | 27.376 | 263 | 147 | 10 | 42 | 298 | 46 | 270 | 4.01e-15 | 75.9 |
| MsG0680033237.01.T02 | MTR_3g024040 | 26.217 | 267 | 151 | 9 | 45 | 310 | 37 | 258 | 5.78e-15 | 75.5 |
| MsG0680033237.01.T02 | MTR_3g014540 | 27.206 | 272 | 145 | 14 | 36 | 297 | 26 | 254 | 8.01e-15 | 75.1 |
| MsG0680033237.01.T02 | MTR_7g060940 | 30.400 | 250 | 122 | 10 | 38 | 282 | 21 | 223 | 1.16e-14 | 74.7 |
| MsG0680033237.01.T02 | MTR_2g426070 | 28.261 | 322 | 177 | 13 | 37 | 333 | 4 | 296 | 1.29e-14 | 74.7 |
| MsG0680033237.01.T02 | MTR_7g061050 | 28.105 | 306 | 138 | 12 | 38 | 320 | 12 | 258 | 2.44e-14 | 73.6 |
| MsG0680033237.01.T02 | MTR_3g034180 | 26.829 | 287 | 155 | 11 | 39 | 308 | 123 | 371 | 3.59e-14 | 73.6 |
| MsG0680033237.01.T02 | MTR_3g009310 | 29.536 | 237 | 129 | 10 | 29 | 262 | 32 | 233 | 4.09e-14 | 73.2 |
| MsG0680033237.01.T02 | MTR_2g078900 | 27.986 | 293 | 139 | 15 | 39 | 310 | 33 | 274 | 4.54e-14 | 72.8 |
| MsG0680033237.01.T02 | MTR_1g054575 | 28.464 | 267 | 136 | 12 | 38 | 298 | 51 | 268 | 5.07e-14 | 73.2 |
| MsG0680033237.01.T02 | MTR_0134s0060 | 26.182 | 275 | 152 | 11 | 37 | 282 | 10 | 262 | 8.40e-14 | 72.0 |
| MsG0680033237.01.T02 | MTR_5g096910 | 22.939 | 279 | 186 | 7 | 39 | 308 | 17 | 275 | 1.03e-13 | 71.6 |
| MsG0680033237.01.T02 | MTR_5g057790 | 28.916 | 249 | 133 | 12 | 39 | 282 | 46 | 255 | 2.84e-13 | 70.5 |
| MsG0680033237.01.T02 | MTR_6g027910 | 27.985 | 268 | 152 | 11 | 43 | 298 | 13 | 251 | 3.81e-13 | 70.1 |
| MsG0680033237.01.T02 | MTR_5g011200 | 26.721 | 247 | 142 | 11 | 39 | 282 | 17 | 227 | 5.83e-13 | 69.3 |
| MsG0680033237.01.T02 | MTR_6g053260 | 27.797 | 295 | 168 | 13 | 23 | 310 | 322 | 578 | 6.73e-13 | 70.1 |
| MsG0680033237.01.T02 | MTR_2g046920 | 25.969 | 258 | 128 | 8 | 38 | 282 | 23 | 230 | 7.27e-13 | 69.3 |
| MsG0680033237.01.T02 | MTR_3g034130 | 27.273 | 286 | 153 | 11 | 39 | 307 | 9 | 256 | 7.38e-13 | 68.9 |
| MsG0680033237.01.T02 | MTR_0760s0010 | 27.559 | 254 | 140 | 11 | 45 | 298 | 53 | 262 | 7.50e-13 | 69.3 |
| MsG0680033237.01.T02 | MTR_7g061060 | 25.987 | 304 | 150 | 11 | 38 | 320 | 12 | 261 | 8.15e-13 | 69.3 |
| MsG0680033237.01.T02 | MTR_5g057690 | 26.829 | 246 | 132 | 10 | 39 | 282 | 46 | 245 | 8.57e-13 | 68.9 |
| MsG0680033237.01.T02 | MTR_4g023080 | 25.632 | 277 | 150 | 11 | 39 | 308 | 9 | 236 | 9.28e-13 | 68.6 |
| MsG0680033237.01.T02 | MTR_5g007610 | 26.154 | 260 | 144 | 8 | 39 | 285 | 41 | 265 | 9.68e-13 | 68.9 |
| MsG0680033237.01.T02 | MTR_4g107820 | 28.175 | 252 | 132 | 11 | 39 | 282 | 36 | 246 | 9.73e-13 | 68.9 |
| MsG0680033237.01.T02 | MTR_4g107780 | 28.175 | 252 | 132 | 11 | 39 | 282 | 36 | 246 | 9.73e-13 | 68.9 |
| MsG0680033237.01.T02 | MTR_4g107780 | 28.175 | 252 | 132 | 11 | 39 | 282 | 36 | 246 | 1.02e-12 | 68.9 |
| MsG0680033237.01.T02 | MTR_7g017040 | 28.148 | 270 | 152 | 13 | 23 | 281 | 3 | 241 | 1.03e-12 | 68.9 |
| MsG0680033237.01.T02 | MTR_4g107820 | 28.175 | 252 | 132 | 11 | 39 | 282 | 36 | 246 | 1.06e-12 | 68.9 |
| MsG0680033237.01.T02 | MTR_2g031720 | 24.638 | 276 | 163 | 9 | 38 | 307 | 5 | 241 | 1.50e-12 | 68.2 |
| MsG0680033237.01.T02 | MTR_0667s0010 | 27.586 | 290 | 150 | 14 | 37 | 308 | 4 | 251 | 1.61e-12 | 68.2 |
| MsG0680033237.01.T02 | MTR_1g094210 | 25.325 | 308 | 170 | 12 | 9 | 308 | 30 | 285 | 1.72e-12 | 68.2 |
| MsG0680033237.01.T02 | MTR_3g010430 | 28.696 | 230 | 115 | 9 | 39 | 260 | 36 | 224 | 1.87e-12 | 68.2 |
| MsG0680033237.01.T02 | MTR_1g094210 | 25.448 | 279 | 151 | 11 | 38 | 308 | 56 | 285 | 1.99e-12 | 68.2 |
| MsG0680033237.01.T02 | MTR_3g014570 | 26.493 | 268 | 146 | 14 | 39 | 297 | 29 | 254 | 2.02e-12 | 67.8 |
| MsG0680033237.01.T02 | MTR_7g066850 | 25.084 | 299 | 154 | 10 | 38 | 320 | 22 | 266 | 2.02e-12 | 68.2 |
| MsG0680033237.01.T02 | MTR_8g013010 | 25.275 | 273 | 150 | 10 | 39 | 299 | 54 | 284 | 2.11e-12 | 67.4 |
| MsG0680033237.01.T02 | MTR_5g057643 | 29.148 | 223 | 116 | 11 | 39 | 258 | 46 | 229 | 3.18e-12 | 66.2 |
| MsG0680033237.01.T02 | MTR_4g109270 | 28.346 | 254 | 130 | 11 | 39 | 284 | 8 | 217 | 3.26e-12 | 67.0 |
| MsG0680033237.01.T02 | MTR_2g021252 | 28.444 | 225 | 118 | 11 | 42 | 261 | 50 | 236 | 3.41e-12 | 67.4 |
| MsG0680033237.01.T02 | MTR_2g025420 | 27.931 | 290 | 161 | 12 | 37 | 307 | 4 | 264 | 4.02e-12 | 67.0 |
| MsG0680033237.01.T02 | MTR_3g009240 | 27.174 | 276 | 156 | 10 | 39 | 308 | 36 | 272 | 5.11e-12 | 66.6 |
| MsG0680033237.01.T02 | MTR_1g055070 | 25.498 | 251 | 163 | 8 | 39 | 285 | 49 | 279 | 5.55e-12 | 66.6 |
| MsG0680033237.01.T02 | MTR_3g036290 | 24.898 | 245 | 139 | 7 | 38 | 282 | 21 | 220 | 6.53e-12 | 66.2 |
| MsG0680033237.01.T02 | MTR_0128s0020 | 25.087 | 287 | 146 | 11 | 38 | 300 | 17 | 258 | 6.64e-12 | 66.2 |
| MsG0680033237.01.T02 | MTR_6g048140 | 28.968 | 252 | 137 | 10 | 39 | 284 | 39 | 254 | 6.85e-12 | 66.2 |
| MsG0680033237.01.T02 | MTR_7g056760 | 30.531 | 226 | 126 | 9 | 38 | 258 | 22 | 221 | 7.19e-12 | 66.2 |
| MsG0680033237.01.T02 | MTR_2g047832 | 27.778 | 252 | 134 | 11 | 38 | 284 | 28 | 236 | 7.44e-12 | 66.2 |
| MsG0680033237.01.T02 | MTR_1g068835 | 25.685 | 292 | 169 | 8 | 39 | 323 | 4 | 254 | 1.17e-11 | 65.5 |
| MsG0680033237.01.T02 | MTR_8g467140 | 27.338 | 278 | 152 | 10 | 39 | 308 | 32 | 267 | 1.30e-11 | 65.1 |
| MsG0680033237.01.T02 | MTR_5g046300 | 27.306 | 271 | 135 | 12 | 39 | 298 | 4 | 223 | 1.36e-11 | 65.1 |
| MsG0680033237.01.T02 | MTR_5g046290 | 27.306 | 271 | 135 | 12 | 39 | 298 | 4 | 223 | 1.36e-11 | 65.1 |
| MsG0680033237.01.T02 | MTR_5g070080 | 25.532 | 282 | 170 | 10 | 39 | 307 | 10 | 264 | 1.36e-11 | 65.5 |
| MsG0680033237.01.T02 | MTR_4g102410 | 25.197 | 254 | 164 | 9 | 39 | 281 | 61 | 299 | 1.67e-11 | 65.5 |
| MsG0680033237.01.T02 | MTR_4g021785 | 25.000 | 280 | 145 | 12 | 39 | 307 | 9 | 234 | 1.71e-11 | 65.1 |
| MsG0680033237.01.T02 | MTR_3g036335 | 27.778 | 252 | 140 | 10 | 39 | 285 | 41 | 255 | 2.21e-11 | 64.7 |
| MsG0680033237.01.T02 | MTR_2g043420 | 34.586 | 133 | 62 | 6 | 38 | 168 | 25 | 134 | 2.36e-11 | 62.0 |
| MsG0680033237.01.T02 | MTR_5g057020 | 26.829 | 246 | 127 | 10 | 39 | 282 | 46 | 240 | 2.92e-11 | 64.3 |
| MsG0680033237.01.T02 | MTR_2g034700 | 28.030 | 264 | 161 | 11 | 39 | 297 | 14 | 253 | 2.95e-11 | 64.3 |
| MsG0680033237.01.T02 | MTR_7g061090 | 27.273 | 242 | 123 | 8 | 38 | 264 | 21 | 224 | 3.12e-11 | 64.3 |
| MsG0680033237.01.T02 | MTR_6g017280 | 25.600 | 250 | 148 | 9 | 38 | 281 | 8 | 225 | 3.28e-11 | 64.3 |
| MsG0680033237.01.T02 | MTR_3g013740 | 27.477 | 222 | 130 | 8 | 39 | 256 | 44 | 238 | 5.32e-11 | 63.5 |
| MsG0680033237.01.T02 | MTR_2g046800 | 26.224 | 286 | 176 | 11 | 38 | 308 | 13 | 278 | 6.91e-11 | 63.2 |
| MsG0680033237.01.T02 | MTR_3g013770 | 27.241 | 290 | 161 | 14 | 34 | 310 | 28 | 280 | 9.50e-11 | 62.8 |
| MsG0680033237.01.T01 | MTR_6g046320 | 81.410 | 312 | 40 | 1 | 1 | 294 | 1 | 312 | 0.0 | 518 |
| MsG0680033237.01.T01 | MTR_0627s0010 | 87.586 | 290 | 21 | 3 | 1 | 276 | 1 | 289 | 0.0 | 516 |
| MsG0680033237.01.T01 | MTR_5g021880 | 60.303 | 330 | 90 | 5 | 1 | 294 | 1 | 325 | 4.11e-128 | 374 |
| MsG0680033237.01.T01 | MTR_5g021880 | 60.303 | 330 | 90 | 5 | 1 | 294 | 1 | 325 | 4.98e-128 | 375 |
| MsG0680033237.01.T01 | MTR_5g021880 | 60.303 | 330 | 90 | 5 | 1 | 294 | 1 | 325 | 1.03e-127 | 374 |
| MsG0680033237.01.T01 | MTR_5g021860 | 60.909 | 330 | 77 | 7 | 1 | 294 | 1 | 314 | 1.30e-121 | 359 |
| MsG0680033237.01.T01 | MTR_5g021860 | 60.909 | 330 | 77 | 7 | 1 | 294 | 1 | 314 | 1.31e-121 | 357 |
| MsG0680033237.01.T01 | MTR_5g021920 | 68.165 | 267 | 62 | 4 | 1 | 244 | 1 | 267 | 3.32e-120 | 347 |
| MsG0680033237.01.T01 | MTR_4g027370 | 59.394 | 330 | 82 | 7 | 1 | 294 | 1 | 314 | 5.65e-118 | 350 |
| MsG0680033237.01.T01 | MTR_5g022040 | 55.689 | 334 | 107 | 6 | 1 | 294 | 1 | 333 | 4.29e-110 | 329 |
| MsG0680033237.01.T01 | MTR_5g007940 | 55.891 | 331 | 91 | 6 | 1 | 294 | 1 | 313 | 6.11e-110 | 327 |
| MsG0680033237.01.T01 | MTR_5g010610 | 56.289 | 318 | 105 | 6 | 1 | 294 | 1 | 308 | 1.26e-106 | 322 |
| MsG0680033237.01.T01 | MTR_5g022900 | 53.892 | 334 | 96 | 7 | 1 | 294 | 1 | 316 | 3.85e-104 | 313 |
| MsG0680033237.01.T01 | MTR_5g010550 | 52.663 | 338 | 113 | 8 | 1 | 294 | 1 | 335 | 3.95e-100 | 303 |
| MsG0680033237.01.T01 | MTR_5g010560 | 54.902 | 306 | 107 | 7 | 15 | 294 | 19 | 319 | 7.41e-98 | 297 |
| MsG0680033237.01.T01 | MTR_5g010550 | 55.229 | 306 | 108 | 7 | 15 | 294 | 19 | 321 | 1.23e-97 | 296 |
| MsG0680033237.01.T01 | MTR_5g022045 | 55.034 | 298 | 124 | 4 | 1 | 294 | 1 | 292 | 6.46e-97 | 294 |
| MsG0680033237.01.T01 | MTR_5g022750 | 54.054 | 296 | 102 | 4 | 1 | 294 | 1 | 264 | 2.28e-94 | 286 |
| MsG0680033237.01.T01 | MTR_7g090810 | 50.000 | 324 | 97 | 8 | 1 | 294 | 1 | 289 | 3.38e-85 | 263 |
| MsG0680033237.01.T01 | MTR_5g022090 | 51.333 | 300 | 90 | 9 | 1 | 294 | 1 | 250 | 1.37e-82 | 255 |
| MsG0680033237.01.T01 | MTR_7g117100 | 57.391 | 230 | 57 | 5 | 101 | 294 | 1 | 225 | 5.21e-79 | 242 |
| MsG0680033237.01.T01 | MTR_5g010660 | 49.835 | 303 | 113 | 8 | 1 | 300 | 1 | 267 | 1.17e-78 | 247 |
| MsG0680033237.01.T01 | MTR_7g117100 | 57.391 | 230 | 57 | 5 | 101 | 294 | 1 | 225 | 3.85e-78 | 243 |
| MsG0680033237.01.T01 | MTR_5g027370 | 45.246 | 305 | 135 | 9 | 1 | 294 | 1 | 284 | 8.90e-71 | 226 |
| MsG0680033237.01.T01 | MTR_5g027330 | 44.918 | 305 | 136 | 9 | 1 | 294 | 12 | 295 | 4.45e-70 | 225 |
| MsG0680033237.01.T01 | MTR_7g090810 | 60.000 | 135 | 50 | 3 | 162 | 294 | 13 | 145 | 4.81e-44 | 153 |
| MsG0680033237.01.T01 | MTR_3g463170 | 47.000 | 100 | 53 | 0 | 1 | 100 | 54 | 153 | 2.42e-23 | 94.7 |
| MsG0680033237.01.T01 | MTR_5g074870 | 51.000 | 100 | 49 | 0 | 1 | 100 | 44 | 143 | 6.64e-22 | 90.5 |
| MsG0680033237.01.T01 | MTR_3g006670 | 31.474 | 251 | 145 | 11 | 39 | 284 | 49 | 277 | 1.73e-21 | 94.4 |
| MsG0680033237.01.T01 | MTR_0115s0020 | 28.846 | 260 | 140 | 11 | 39 | 277 | 10 | 245 | 7.55e-20 | 89.7 |
| MsG0680033237.01.T01 | MTR_7g407070 | 29.796 | 245 | 138 | 7 | 39 | 269 | 32 | 256 | 2.16e-19 | 88.2 |
| MsG0680033237.01.T01 | MTR_3g436150 | 30.165 | 242 | 137 | 9 | 39 | 269 | 32 | 252 | 4.02e-19 | 87.4 |
| MsG0680033237.01.T01 | MTR_1g017970 | 39.744 | 156 | 63 | 4 | 1 | 156 | 1 | 125 | 3.00e-18 | 79.7 |
| MsG0680033237.01.T01 | MTR_3g011060 | 28.731 | 268 | 167 | 8 | 39 | 297 | 28 | 280 | 3.91e-18 | 84.7 |
| MsG0680033237.01.T01 | MTR_2g021155 | 30.894 | 246 | 120 | 9 | 39 | 269 | 33 | 243 | 8.85e-18 | 84.7 |
| MsG0680033237.01.T01 | MTR_5g048160 | 28.182 | 220 | 129 | 7 | 39 | 248 | 4 | 204 | 1.51e-17 | 82.8 |
| MsG0680033237.01.T01 | MTR_3g011100 | 27.239 | 268 | 167 | 9 | 39 | 297 | 235 | 483 | 2.24e-17 | 83.2 |
| MsG0680033237.01.T01 | MTR_3g058440 | 29.304 | 273 | 151 | 12 | 39 | 297 | 35 | 279 | 7.78e-17 | 80.1 |
| MsG0680033237.01.T01 | MTR_0064s0160 | 27.368 | 285 | 162 | 11 | 39 | 299 | 42 | 305 | 7.99e-17 | 81.3 |
| MsG0680033237.01.T01 | MTR_7g061050 | 29.644 | 253 | 115 | 8 | 38 | 269 | 12 | 222 | 2.90e-16 | 79.3 |
| MsG0680033237.01.T01 | MTR_3g058480 | 26.207 | 290 | 171 | 10 | 39 | 313 | 39 | 300 | 3.29e-16 | 78.6 |
| MsG0680033237.01.T01 | MTR_4g133170 | 27.966 | 236 | 137 | 10 | 39 | 269 | 4 | 211 | 3.34e-16 | 79.0 |
| MsG0680033237.01.T01 | MTR_3g007410 | 28.679 | 265 | 157 | 11 | 42 | 297 | 55 | 296 | 5.74e-16 | 78.6 |
| MsG0680033237.01.T01 | MTR_3g009310 | 27.473 | 273 | 167 | 10 | 29 | 294 | 32 | 280 | 8.59e-16 | 77.8 |
| MsG0680033237.01.T01 | MTR_3g014540 | 28.571 | 259 | 145 | 12 | 36 | 284 | 26 | 254 | 9.25e-16 | 77.8 |
| MsG0680033237.01.T01 | MTR_3g007430 | 27.200 | 250 | 151 | 8 | 42 | 285 | 46 | 270 | 1.01e-15 | 77.4 |
| MsG0680033237.01.T01 | MTR_3g007360 | 28.464 | 267 | 155 | 10 | 42 | 297 | 55 | 296 | 1.07e-15 | 77.8 |
| MsG0680033237.01.T01 | MTR_2g426070 | 28.571 | 315 | 172 | 13 | 37 | 320 | 4 | 296 | 3.01e-15 | 76.3 |
| MsG0680033237.01.T01 | MTR_2g046920 | 27.917 | 240 | 133 | 7 | 38 | 269 | 23 | 230 | 3.72e-15 | 75.9 |
| MsG0680033237.01.T01 | MTR_1g054575 | 29.921 | 254 | 136 | 11 | 38 | 285 | 51 | 268 | 3.79e-15 | 76.6 |
| MsG0680033237.01.T01 | MTR_3g024040 | 27.734 | 256 | 148 | 9 | 45 | 297 | 37 | 258 | 3.86e-15 | 75.9 |
| MsG0680033237.01.T01 | MTR_7g060940 | 30.705 | 241 | 120 | 10 | 38 | 269 | 21 | 223 | 5.48e-15 | 75.5 |
| MsG0680033237.01.T01 | MTR_5g057790 | 27.798 | 277 | 161 | 11 | 39 | 304 | 46 | 294 | 6.39e-15 | 75.1 |
| MsG0680033237.01.T01 | MTR_6g053260 | 28.873 | 284 | 166 | 11 | 23 | 297 | 322 | 578 | 1.18e-14 | 75.1 |
| MsG0680033237.01.T01 | MTR_7g061060 | 26.780 | 295 | 146 | 10 | 38 | 307 | 12 | 261 | 1.30e-14 | 74.3 |
| MsG0680033237.01.T01 | MTR_4g107820 | 28.926 | 242 | 130 | 10 | 39 | 269 | 36 | 246 | 1.66e-14 | 73.9 |
| MsG0680033237.01.T01 | MTR_4g107780 | 28.926 | 242 | 130 | 10 | 39 | 269 | 36 | 246 | 1.66e-14 | 73.9 |
| MsG0680033237.01.T01 | MTR_3g034180 | 27.273 | 275 | 156 | 11 | 39 | 295 | 123 | 371 | 1.74e-14 | 74.3 |
| MsG0680033237.01.T01 | MTR_4g107820 | 28.926 | 242 | 130 | 10 | 39 | 269 | 36 | 246 | 1.88e-14 | 73.9 |
| MsG0680033237.01.T01 | MTR_5g057690 | 27.234 | 235 | 132 | 8 | 39 | 269 | 46 | 245 | 1.95e-14 | 73.9 |
| MsG0680033237.01.T01 | MTR_4g107780 | 28.926 | 242 | 130 | 10 | 39 | 269 | 36 | 246 | 1.97e-14 | 73.9 |
| MsG0680033237.01.T01 | MTR_2g031720 | 25.856 | 263 | 163 | 9 | 38 | 294 | 5 | 241 | 2.76e-14 | 73.2 |
| MsG0680033237.01.T01 | MTR_5g057643 | 29.245 | 212 | 117 | 8 | 39 | 245 | 46 | 229 | 4.82e-14 | 71.6 |
| MsG0680033237.01.T01 | MTR_1g094210 | 26.689 | 296 | 168 | 12 | 9 | 295 | 30 | 285 | 6.79e-14 | 72.4 |
| MsG0680033237.01.T01 | MTR_4g031770 | 29.098 | 244 | 129 | 11 | 39 | 271 | 4 | 214 | 8.36e-14 | 71.6 |
| MsG0680033237.01.T01 | MTR_1g094210 | 27.715 | 267 | 147 | 11 | 38 | 295 | 56 | 285 | 8.54e-14 | 72.0 |
| MsG0680033237.01.T01 | MTR_0134s0060 | 27.668 | 253 | 134 | 10 | 37 | 255 | 10 | 247 | 8.99e-14 | 72.0 |
| MsG0680033237.01.T01 | MTR_7g017040 | 28.794 | 257 | 154 | 12 | 23 | 268 | 3 | 241 | 9.23e-14 | 71.6 |
| MsG0680033237.01.T01 | MTR_3g007270 | 28.390 | 236 | 153 | 7 | 38 | 269 | 46 | 269 | 9.56e-14 | 71.6 |
| MsG0680033237.01.T01 | MTR_3g034130 | 28.102 | 274 | 153 | 11 | 39 | 294 | 9 | 256 | 1.31e-13 | 71.2 |
| MsG0680033237.01.T01 | MTR_3g009240 | 28.030 | 264 | 156 | 10 | 39 | 295 | 36 | 272 | 1.58e-13 | 70.9 |
| MsG0680033237.01.T01 | MTR_8g013010 | 26.437 | 261 | 149 | 10 | 39 | 286 | 54 | 284 | 1.84e-13 | 70.5 |
| MsG0680033237.01.T01 | MTR_0760s0010 | 27.160 | 243 | 142 | 9 | 45 | 285 | 53 | 262 | 2.21e-13 | 70.5 |
| MsG0680033237.01.T01 | MTR_2g047832 | 28.151 | 238 | 138 | 8 | 38 | 271 | 28 | 236 | 2.30e-13 | 70.9 |
| MsG0680033237.01.T01 | MTR_5g007610 | 27.236 | 246 | 146 | 7 | 39 | 272 | 41 | 265 | 2.60e-13 | 70.5 |
| MsG0680033237.01.T01 | MTR_5g057710 | 26.050 | 238 | 141 | 8 | 39 | 269 | 46 | 255 | 3.38e-13 | 70.1 |
| MsG0680033237.01.T01 | MTR_2g021252 | 29.767 | 215 | 115 | 11 | 42 | 248 | 50 | 236 | 3.44e-13 | 70.1 |
| MsG0680033237.01.T01 | MTR_2g025420 | 27.798 | 277 | 165 | 10 | 37 | 294 | 4 | 264 | 3.53e-13 | 70.1 |
| MsG0680033237.01.T01 | MTR_7g056717 | 28.287 | 251 | 119 | 10 | 38 | 270 | 22 | 229 | 4.22e-13 | 69.7 |
| MsG0680033237.01.T01 | MTR_5g011200 | 26.050 | 238 | 142 | 9 | 39 | 269 | 17 | 227 | 4.53e-13 | 69.7 |
| MsG0680033237.01.T01 | MTR_7g056760 | 31.455 | 213 | 128 | 8 | 38 | 245 | 22 | 221 | 4.89e-13 | 69.7 |
| MsG0680033237.01.T01 | MTR_7g061090 | 27.948 | 229 | 125 | 7 | 38 | 251 | 21 | 224 | 6.53e-13 | 69.3 |
| MsG0680033237.01.T01 | MTR_5g057020 | 27.234 | 235 | 127 | 8 | 39 | 269 | 46 | 240 | 7.11e-13 | 68.9 |
| MsG0680033237.01.T01 | MTR_4g070550 | 27.055 | 292 | 175 | 13 | 39 | 310 | 5 | 278 | 7.54e-13 | 68.9 |
| MsG0680033237.01.T01 | MTR_2g046900 | 28.839 | 267 | 158 | 11 | 38 | 295 | 27 | 270 | 8.12e-13 | 68.9 |
| MsG0680033237.01.T01 | MTR_1g112930 | 26.587 | 252 | 155 | 9 | 39 | 286 | 25 | 250 | 8.69e-13 | 68.9 |
| MsG0680033237.01.T01 | MTR_5g046300 | 28.287 | 251 | 145 | 10 | 39 | 285 | 4 | 223 | 8.83e-13 | 68.6 |
| MsG0680033237.01.T01 | MTR_5g046290 | 28.287 | 251 | 145 | 10 | 39 | 285 | 4 | 223 | 8.83e-13 | 68.6 |
| MsG0680033237.01.T01 | MTR_1g050542 | 27.660 | 235 | 131 | 9 | 38 | 269 | 57 | 255 | 9.75e-13 | 68.9 |
| MsG0680033237.01.T01 | MTR_3g010430 | 29.439 | 214 | 121 | 7 | 39 | 247 | 36 | 224 | 1.24e-12 | 68.6 |
| MsG0680033237.01.T01 | MTR_1g055070 | 25.714 | 245 | 157 | 7 | 39 | 272 | 49 | 279 | 1.32e-12 | 68.2 |
| MsG0680033237.01.T01 | MTR_1g097330 | 27.907 | 258 | 136 | 10 | 38 | 285 | 15 | 232 | 1.41e-12 | 68.2 |
| MsG0680033237.01.T01 | MTR_3g014570 | 27.652 | 264 | 135 | 13 | 39 | 284 | 29 | 254 | 1.78e-12 | 67.8 |
| MsG0680033237.01.T01 | MTR_2g078900 | 28.671 | 286 | 133 | 16 | 39 | 297 | 33 | 274 | 2.35e-12 | 67.4 |
| MsG0680033237.01.T01 | MTR_4g109270 | 28.631 | 241 | 133 | 10 | 39 | 271 | 8 | 217 | 2.40e-12 | 67.4 |
| MsG0680033237.01.T01 | MTR_0128s0020 | 25.912 | 274 | 147 | 10 | 38 | 287 | 17 | 258 | 2.64e-12 | 67.4 |
| MsG0680033237.01.T01 | MTR_6g053240 | 27.143 | 280 | 158 | 12 | 39 | 301 | 28 | 278 | 3.70e-12 | 67.0 |
| MsG0680033237.01.T01 | MTR_3g036290 | 26.809 | 235 | 134 | 7 | 38 | 269 | 21 | 220 | 3.79e-12 | 66.6 |
| MsG0680033237.01.T01 | MTR_3g036335 | 27.500 | 240 | 143 | 8 | 39 | 272 | 41 | 255 | 5.55e-12 | 66.6 |
| MsG0680033237.01.T01 | MTR_5g069760 | 25.271 | 277 | 134 | 10 | 38 | 287 | 5 | 235 | 6.43e-12 | 66.2 |
| MsG0680033237.01.T01 | MTR_5g070088 | 27.985 | 268 | 169 | 9 | 39 | 294 | 7 | 262 | 7.30e-12 | 65.9 |
| MsG0680033237.01.T01 | MTR_2g028110 | 24.756 | 307 | 176 | 14 | 39 | 320 | 4 | 280 | 7.61e-12 | 65.9 |
| MsG0680033237.01.T01 | MTR_4g021785 | 25.283 | 265 | 150 | 12 | 39 | 294 | 9 | 234 | 7.65e-12 | 65.9 |
| MsG0680033237.01.T01 | MTR_5g022420 | 26.715 | 277 | 146 | 10 | 39 | 302 | 27 | 259 | 7.70e-12 | 65.9 |
| MsG0680033237.01.T01 | MTR_3g006530 | 26.939 | 245 | 151 | 10 | 39 | 276 | 40 | 263 | 8.18e-12 | 65.9 |
| MsG0680033237.01.T01 | MTR_4g023080 | 26.136 | 264 | 152 | 11 | 39 | 295 | 9 | 236 | 9.77e-12 | 65.5 |
| MsG0680033237.01.T01 | MTR_3g010450 | 27.734 | 256 | 149 | 10 | 45 | 297 | 3 | 225 | 1.09e-11 | 64.3 |
| MsG0680033237.01.T01 | MTR_7g069550 | 26.966 | 267 | 164 | 11 | 37 | 284 | 12 | 266 | 1.17e-11 | 65.5 |
| MsG0680033237.01.T01 | MTR_7g066850 | 25.524 | 286 | 156 | 11 | 38 | 307 | 22 | 266 | 1.20e-11 | 65.5 |
| MsG0680033237.01.T01 | MTR_5g057040 | 26.977 | 215 | 119 | 8 | 36 | 245 | 48 | 229 | 1.29e-11 | 65.9 |
| MsG0680033237.01.T01 | MTR_4g024890 | 23.509 | 285 | 166 | 10 | 38 | 307 | 9 | 256 | 1.31e-11 | 65.1 |
| MsG0680033237.01.T01 | MTR_2g043420 | 36.290 | 124 | 59 | 6 | 38 | 155 | 25 | 134 | 1.37e-11 | 62.4 |
| MsG0680033237.01.T01 | MTR_3g013770 | 27.599 | 279 | 161 | 13 | 34 | 297 | 28 | 280 | 1.37e-11 | 65.1 |
| MsG0680033237.01.T01 | MTR_8g073550 | 27.523 | 218 | 132 | 5 | 38 | 253 | 29 | 222 | 1.67e-11 | 63.5 |
| MsG0680033237.01.T01 | MTR_8g467140 | 27.715 | 267 | 152 | 11 | 39 | 295 | 32 | 267 | 2.53e-11 | 63.9 |
| MsG0680033237.01.T01 | MTR_1g097490 | 33.721 | 172 | 93 | 8 | 39 | 209 | 49 | 200 | 2.98e-11 | 64.3 |
| MsG0680033237.01.T01 | MTR_3g013950 | 26.316 | 247 | 151 | 7 | 36 | 271 | 3 | 229 | 3.18e-11 | 64.3 |
| MsG0680033237.01.T01 | MTR_3g010390 | 26.374 | 273 | 166 | 12 | 39 | 297 | 33 | 284 | 3.29e-11 | 63.9 |
| MsG0680033237.01.T01 | MTR_3g013740 | 28.302 | 212 | 128 | 7 | 39 | 243 | 44 | 238 | 3.31e-11 | 64.3 |
| MsG0680033237.01.T01 | MTR_6g013270 | 26.033 | 242 | 156 | 8 | 38 | 277 | 28 | 248 | 3.48e-11 | 63.9 |
| MsG0680033237.01.T01 | MTR_2g034700 | 26.459 | 257 | 161 | 8 | 39 | 284 | 14 | 253 | 3.69e-11 | 63.9 |
| MsG0680033237.01.T01 | MTR_2g104340 | 26.104 | 249 | 147 | 10 | 39 | 268 | 14 | 244 | 3.76e-11 | 63.9 |
| MsG0680033237.01.T01 | MTR_3g010440 | 26.506 | 249 | 160 | 10 | 39 | 284 | 26 | 254 | 4.08e-11 | 63.5 |
| MsG0680033237.01.T01 | MTR_5g070080 | 24.823 | 282 | 159 | 10 | 39 | 294 | 10 | 264 | 4.20e-11 | 63.9 |
| MsG0680033237.01.T01 | MTR_7g022670 | 33.600 | 125 | 64 | 4 | 37 | 155 | 21 | 132 | 4.47e-11 | 63.5 |
| MsG0680033237.01.T01 | MTR_4g116330 | 27.473 | 273 | 144 | 11 | 39 | 295 | 23 | 257 | 5.37e-11 | 63.5 |
| MsG0680033237.01.T01 | MTR_7g022600 | 26.119 | 268 | 140 | 11 | 39 | 276 | 23 | 262 | 5.44e-11 | 63.5 |
| MsG0680033237.01.T01 | MTR_7g013590 | 27.869 | 244 | 142 | 9 | 8 | 245 | 5 | 220 | 5.91e-11 | 63.5 |
| MsG0680033237.01.T01 | MTR_4g011660 | 27.778 | 198 | 94 | 6 | 39 | 213 | 19 | 190 | 6.96e-11 | 63.2 |
| MsG0680033237.01.T01 | MTR_6g065980 | 25.483 | 259 | 159 | 7 | 39 | 296 | 16 | 241 | 7.13e-11 | 62.8 |
| MsG0680033237.01.T01 | MTR_4g030830 | 26.587 | 252 | 151 | 9 | 31 | 273 | 2 | 228 | 7.45e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033237.01.T02 | AT3G06240 | 26.531 | 294 | 171 | 12 | 38 | 308 | 35 | 306 | 4.77e-17 | 82.0 |
| MsG0680033237.01.T02 | AT3G07870 | 24.585 | 301 | 175 | 9 | 39 | 322 | 28 | 293 | 6.53e-13 | 69.7 |
| MsG0680033237.01.T02 | AT1G53370 | 25.442 | 283 | 157 | 10 | 20 | 294 | 9 | 245 | 7.87e-13 | 69.3 |
| MsG0680033237.01.T02 | AT1G53550 | 25.758 | 264 | 158 | 11 | 35 | 294 | 31 | 260 | 1.06e-12 | 68.9 |
| MsG0680033237.01.T01 | AT3G06240 | 25.685 | 292 | 163 | 11 | 38 | 295 | 35 | 306 | 2.37e-16 | 79.7 |
| MsG0680033237.01.T01 | AT1G53370 | 26.667 | 270 | 157 | 10 | 20 | 281 | 9 | 245 | 1.31e-14 | 74.3 |
| MsG0680033237.01.T01 | AT1G53550 | 27.490 | 251 | 157 | 11 | 35 | 281 | 31 | 260 | 3.57e-14 | 73.2 |
| MsG0680033237.01.T01 | AT3G07870 | 25.000 | 288 | 177 | 8 | 39 | 309 | 28 | 293 | 4.08e-14 | 73.2 |
| MsG0680033237.01.T01 | AT3G16210 | 23.656 | 279 | 147 | 9 | 38 | 302 | 4 | 230 | 8.26e-13 | 68.9 |
Find 81 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGCCATATTTATCAATT+TGG | 0.171054 | 6:-60205402 | None:intergenic |
| GTAAATGTGTGTGCAAAATT+TGG | 0.230841 | 6:+60204628 | MsG0680033237.01.T02:CDS |
| GTTCGAATCATGAGACTAAT+TGG | 0.246505 | 6:-60204702 | None:intergenic |
| AATATAAGGTAATACATATT+TGG | 0.267747 | 6:+60205111 | MsG0680033237.01.T02:CDS |
| AATGACACGGTTCGTGTAAT+AGG | 0.270939 | 6:+60205050 | MsG0680033237.01.T02:CDS |
| TATTAGCATGGGAGAATTAA+AGG | 0.273494 | 6:+60205441 | MsG0680033237.01.T02:CDS |
| TCCTAAAACTAATGAATATA+AGG | 0.275555 | 6:+60205097 | MsG0680033237.01.T02:CDS |
| ACATGACTGCCAACCCCAAC+TGG | 0.282330 | 6:-60205373 | None:intergenic |
| TCTCTGTTGCAAGCAATATA+AGG | 0.283111 | 6:-60204885 | None:intergenic |
| CATCTTTGGCTAGCCCTAAC+AGG | 0.301650 | 6:-60204480 | None:intergenic |
| CAGGACCAAATTGATAAATA+TGG | 0.308143 | 6:+60205397 | MsG0680033237.01.T02:CDS |
| AGGGTTCAATCACCCCTGTT+AGG | 0.338613 | 6:+60204466 | MsG0680033237.01.T02:CDS |
| ATAGGACAAGAAGCTGGTTT+TGG | 0.341685 | 6:+60205068 | MsG0680033237.01.T02:CDS |
| GCTAGCCAAAGATGCAATAA+AGG | 0.378022 | 6:+60204489 | MsG0680033237.01.T02:CDS |
| AGTGATCTGCAACCCATTCA+TGG | 0.389927 | 6:+60204983 | MsG0680033237.01.T02:CDS |
| CAAAGATGCAATAAAGGAAA+AGG | 0.394832 | 6:+60204495 | MsG0680033237.01.T02:CDS |
| ACTAAAGGGTTTCCAGTAGT+TGG | 0.417091 | 6:-60204963 | None:intergenic |
| ACAAATGAGAAGAGACTTGA+TGG | 0.428308 | 6:-60204607 | None:intergenic |
| CTTCATTGGATCAGATTTGA+GGG | 0.430753 | 6:+60205287 | MsG0680033237.01.T02:CDS |
| GTGTGAATGGTGCACTTCAT+TGG | 0.443289 | 6:+60205273 | MsG0680033237.01.T02:CDS |
| AGACATGAAAATGAAATTTG+AGG | 0.447128 | 6:-60205236 | None:intergenic |
| CGAAGAGGAAGCCTGAATAT+AGG | 0.448133 | 6:-60204819 | None:intergenic |
| TGAAGCTTGAGCCTATATTC+AGG | 0.453785 | 6:+60204808 | MsG0680033237.01.T02:CDS |
| GATCCTGAAAAGTTTGAGAT+TGG | 0.461475 | 6:+60204771 | MsG0680033237.01.T02:CDS |
| AGTATTGTGAATTCTTGTAA+TGG | 0.464840 | 6:+60204921 | MsG0680033237.01.T02:CDS |
| ATTACACGAACCGTGTCATT+CGG | 0.466156 | 6:-60205047 | None:intergenic |
| ATGAATCCCACTTGTGTGAA+TGG | 0.466445 | 6:+60205260 | MsG0680033237.01.T02:CDS |
| CTCTGTTGCAAGCAATATAA+GGG | 0.469694 | 6:-60204884 | None:intergenic |
| ATATTCAGGCTTCCTCTTCG+TGG | 0.472954 | 6:+60204822 | MsG0680033237.01.T02:CDS |
| TGTTTGTCTCAACCAACTAC+TGG | 0.475095 | 6:+60204951 | MsG0680033237.01.T02:CDS |
| ATCTTTGGCTAGCCCTAACA+GGG | 0.475313 | 6:-60204479 | None:intergenic |
| TGGGGTTGGCAGTCATGTCC+AGG | 0.478359 | 6:+60205378 | MsG0680033237.01.T02:CDS |
| ATGTGGGCGGTGAGGTGGGA+TGG | 0.484801 | 6:-60204570 | None:intergenic |
| GGGTTCAATCACCCCTGTTA+GGG | 0.488394 | 6:+60204467 | MsG0680033237.01.T02:CDS |
| AATGGGTTGCAGATCACTAA+AGG | 0.491916 | 6:-60204978 | None:intergenic |
| ATGGAAGAATATCAAAATAG+TGG | 0.492761 | 6:-60204551 | None:intergenic |
| CATATTTATCAATTTGGTCC+TGG | 0.492897 | 6:-60205396 | None:intergenic |
| GTGATCTGCAACCCATTCAT+GGG | 0.493175 | 6:+60204984 | MsG0680033237.01.T02:CDS |
| ATGGGTTGCAGATCACTAAA+GGG | 0.499946 | 6:-60204977 | None:intergenic |
| ACTTCATTGGATCAGATTTG+AGG | 0.504033 | 6:+60205286 | MsG0680033237.01.T02:CDS |
| AAAGATGCAATAAAGGAAAA+GGG | 0.505845 | 6:+60204496 | MsG0680033237.01.T02:CDS |
| TTGGATCAGATTTGAGGGAA+AGG | 0.514735 | 6:+60205292 | MsG0680033237.01.T02:CDS |
| ACATTGATATTTCTCCATGT+TGG | 0.515176 | 6:-60205209 | None:intergenic |
| GCAAAATGTGGGCGGTGAGG+TGG | 0.515225 | 6:-60204575 | None:intergenic |
| CATGACTGCCAACCCCAACT+GGG | 0.525354 | 6:-60205372 | None:intergenic |
| CAAAATGTGGGCGGTGAGGT+GGG | 0.534960 | 6:-60204574 | None:intergenic |
| TTTCAGGATCGCACTCAAGA+AGG | 0.539105 | 6:-60204758 | None:intergenic |
| ATGCTAATATGTATGTTACT+TGG | 0.548079 | 6:-60205427 | None:intergenic |
| ATACGAACTATAGTAGCTTC+AGG | 0.550118 | 6:-60205023 | None:intergenic |
| ATAAGGTAATACATATTTGG+AGG | 0.557384 | 6:+60205114 | MsG0680033237.01.T02:CDS |
| AGGAAAAGGGAAAGTTGAGG+AGG | 0.566325 | 6:+60204509 | MsG0680033237.01.T02:CDS |
| GATCGCACTCAAGAAGGTAG+AGG | 0.575897 | 6:-60204752 | None:intergenic |
| TGTTATACATGTCAATTCCT+CGG | 0.577840 | 6:+60205142 | MsG0680033237.01.T02:CDS |
| AAGTGCACCATTCACACAAG+TGG | 0.585491 | 6:-60205267 | None:intergenic |
| AAGTAACATACATATTAGCA+TGG | 0.586965 | 6:+60205429 | MsG0680033237.01.T02:CDS |
| CGTGTAATAGGACAAGAAGC+TGG | 0.589080 | 6:+60205062 | MsG0680033237.01.T02:CDS |
| AGTTCGTATGCCGAATGACA+CGG | 0.590736 | 6:+60205037 | MsG0680033237.01.T02:CDS |
| CCTTGCTGAGATACACACAC+TGG | 0.607072 | 6:+60205181 | MsG0680033237.01.T02:CDS |
| ATGACTGCCAACCCCAACTG+GGG | 0.608140 | 6:-60205371 | None:intergenic |
| GTGGTGATGTCAAATCACTT+AGG | 0.608927 | 6:+60204841 | MsG0680033237.01.T02:CDS |
| CAAATGAGAAGAGACTTGAT+GGG | 0.614627 | 6:-60204606 | None:intergenic |
| GAACACATGCTCAGAGTCCG+AGG | 0.621957 | 6:-60205159 | None:intergenic |
| ATCGCACTCAAGAAGGTAGA+GGG | 0.626102 | 6:-60204751 | None:intergenic |
| CTTGCTGAGATACACACACT+GGG | 0.629213 | 6:+60205182 | MsG0680033237.01.T02:CDS |
| AGTAACATACATATTAGCAT+GGG | 0.629764 | 6:+60205430 | MsG0680033237.01.T02:CDS |
| ACACACTGGGAACACCAACA+TGG | 0.640562 | 6:+60205195 | MsG0680033237.01.T02:CDS |
| TGATCTGCAACCCATTCATG+GGG | 0.645282 | 6:+60204985 | MsG0680033237.01.T02:CDS |
| ATATAGGCTCAAGCTTCACA+TGG | 0.645933 | 6:-60204803 | None:intergenic |
| TGTGTGTGCAAAATTTGGAA+AGG | 0.655005 | 6:+60204633 | MsG0680033237.01.T02:CDS |
| CCAGTGTGTGTATCTCAGCA+AGG | 0.657741 | 6:-60205181 | None:intergenic |
| GATTTGACATCACCACGAAG+AGG | 0.658795 | 6:-60204834 | None:intergenic |
| AGTGCACCATTCACACAAGT+GGG | 0.658959 | 6:-60205266 | None:intergenic |
| TAAAGGAAAAGGGAAAGTTG+AGG | 0.666320 | 6:+60204506 | MsG0680033237.01.T02:CDS |
| TGGGAAGTTGAAGCAAAATG+TGG | 0.672550 | 6:-60204587 | None:intergenic |
| TGACTGCCAACCCCAACTGG+GGG | 0.677369 | 6:-60205370 | None:intergenic |
| GGGAAGTTGAAGCAAAATGT+GGG | 0.696152 | 6:-60204586 | None:intergenic |
| AACATGGAGAAATATCAATG+TGG | 0.716841 | 6:+60205211 | MsG0680033237.01.T02:CDS |
| GAAGCAAAATGTGGGCGGTG+AGG | 0.717628 | 6:-60204578 | None:intergenic |
| AAGTTGAAGCAAAATGTGGG+CGG | 0.775595 | 6:-60204583 | None:intergenic |
| GATCTGCAACCCATTCATGG+GGG | 0.783717 | 6:+60204986 | MsG0680033237.01.T02:CDS |
| TCTTTGGCTAGCCCTAACAG+GGG | 0.791859 | 6:-60204478 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAGGTAATACATATT+TGG | + | Chr6:60205111-60205130 | MsG0680033237.01.T02:CDS | 15.0% |
| !! | AAAAGCCATATTTATCAATT+TGG | - | Chr6:60205405-60205424 | None:intergenic | 20.0% |
| !! | TCCTAAAACTAATGAATATA+AGG | + | Chr6:60205097-60205116 | MsG0680033237.01.T02:CDS | 20.0% |
| !!! | ACCTTATATTCATTAGTTTT+AGG | - | Chr6:60205101-60205120 | None:intergenic | 20.0% |
| ! | AAAGATGCAATAAAGGAAAA+GGG | + | Chr6:60204496-60204515 | MsG0680033237.01.T02:CDS | 25.0% |
| ! | AAGTAACATACATATTAGCA+TGG | + | Chr6:60205429-60205448 | MsG0680033237.01.T02:CDS | 25.0% |
| ! | AGACATGAAAATGAAATTTG+AGG | - | Chr6:60205239-60205258 | None:intergenic | 25.0% |
| ! | AGTAACATACATATTAGCAT+GGG | + | Chr6:60205430-60205449 | MsG0680033237.01.T02:CDS | 25.0% |
| ! | AGTATTGTGAATTCTTGTAA+TGG | + | Chr6:60204921-60204940 | MsG0680033237.01.T02:CDS | 25.0% |
| ! | ATAAGGTAATACATATTTGG+AGG | + | Chr6:60205114-60205133 | MsG0680033237.01.T02:CDS | 25.0% |
| ! | ATGCTAATATGTATGTTACT+TGG | - | Chr6:60205430-60205449 | None:intergenic | 25.0% |
| ! | ATGGAAGAATATCAAAATAG+TGG | - | Chr6:60204554-60204573 | None:intergenic | 25.0% |
| AACATGGAGAAATATCAATG+TGG | + | Chr6:60205211-60205230 | MsG0680033237.01.T02:CDS | 30.0% | |
| ACATTGATATTTCTCCATGT+TGG | - | Chr6:60205212-60205231 | None:intergenic | 30.0% | |
| CAAAGATGCAATAAAGGAAA+AGG | + | Chr6:60204495-60204514 | MsG0680033237.01.T02:CDS | 30.0% | |
| CAGGACCAAATTGATAAATA+TGG | + | Chr6:60205397-60205416 | MsG0680033237.01.T02:CDS | 30.0% | |
| CATATTTATCAATTTGGTCC+TGG | - | Chr6:60205399-60205418 | None:intergenic | 30.0% | |
| GTAAATGTGTGTGCAAAATT+TGG | + | Chr6:60204628-60204647 | MsG0680033237.01.T02:CDS | 30.0% | |
| TGTTATACATGTCAATTCCT+CGG | + | Chr6:60205142-60205161 | MsG0680033237.01.T02:CDS | 30.0% | |
| ! | CTTTTCCTTTATTGCATCTT+TGG | - | Chr6:60204497-60204516 | None:intergenic | 30.0% |
| ACAAATGAGAAGAGACTTGA+TGG | - | Chr6:60204610-60204629 | None:intergenic | 35.0% | |
| ACTTCATTGGATCAGATTTG+AGG | + | Chr6:60205286-60205305 | MsG0680033237.01.T02:CDS | 35.0% | |
| ATACGAACTATAGTAGCTTC+AGG | - | Chr6:60205026-60205045 | None:intergenic | 35.0% | |
| CAAATGAGAAGAGACTTGAT+GGG | - | Chr6:60204609-60204628 | None:intergenic | 35.0% | |
| CTCTGTTGCAAGCAATATAA+GGG | - | Chr6:60204887-60204906 | None:intergenic | 35.0% | |
| CTTCATTGGATCAGATTTGA+GGG | + | Chr6:60205287-60205306 | MsG0680033237.01.T02:CDS | 35.0% | |
| GTTCGAATCATGAGACTAAT+TGG | - | Chr6:60204705-60204724 | None:intergenic | 35.0% | |
| TAAAGGAAAAGGGAAAGTTG+AGG | + | Chr6:60204506-60204525 | MsG0680033237.01.T02:CDS | 35.0% | |
| TCTCTGTTGCAAGCAATATA+AGG | - | Chr6:60204888-60204907 | None:intergenic | 35.0% | |
| TGTGTGTGCAAAATTTGGAA+AGG | + | Chr6:60204633-60204652 | MsG0680033237.01.T02:CDS | 35.0% | |
| TTATGAATTCCCCCATGAAT+GGG | - | Chr6:60204998-60205017 | None:intergenic | 35.0% | |
| ! | CTTCCAATCTCAAACTTTTC+AGG | - | Chr6:60204777-60204796 | None:intergenic | 35.0% |
| ! | GATCCTGAAAAGTTTGAGAT+TGG | + | Chr6:60204771-60204790 | MsG0680033237.01.T02:CDS | 35.0% |
| AAGTTGAAGCAAAATGTGGG+CGG | - | Chr6:60204586-60204605 | None:intergenic | 40.0% | |
| AATGACACGGTTCGTGTAAT+AGG | + | Chr6:60205050-60205069 | MsG0680033237.01.T02:CDS | 40.0% | |
| ACTAAAGGGTTTCCAGTAGT+TGG | - | Chr6:60204966-60204985 | None:intergenic | 40.0% | |
| ATATAGGCTCAAGCTTCACA+TGG | - | Chr6:60204806-60204825 | None:intergenic | 40.0% | |
| ATGAATCCCACTTGTGTGAA+TGG | + | Chr6:60205260-60205279 | MsG0680033237.01.T02:CDS | 40.0% | |
| CTTATGAATTCCCCCATGAA+TGG | - | Chr6:60204999-60205018 | None:intergenic | 40.0% | |
| GCTAGCCAAAGATGCAATAA+AGG | + | Chr6:60204489-60204508 | MsG0680033237.01.T02:CDS | 40.0% | |
| GGGAAGTTGAAGCAAAATGT+GGG | - | Chr6:60204589-60204608 | None:intergenic | 40.0% | |
| TGAAGCTTGAGCCTATATTC+AGG | + | Chr6:60204808-60204827 | MsG0680033237.01.T02:CDS | 40.0% | |
| TGGGAAGTTGAAGCAAAATG+TGG | - | Chr6:60204590-60204609 | None:intergenic | 40.0% | |
| TGTTTGTCTCAACCAACTAC+TGG | + | Chr6:60204951-60204970 | MsG0680033237.01.T02:CDS | 40.0% | |
| TTGGATCAGATTTGAGGGAA+AGG | + | Chr6:60205292-60205311 | MsG0680033237.01.T02:CDS | 40.0% | |
| ! | ATGGGTTGCAGATCACTAAA+GGG | - | Chr6:60204980-60204999 | None:intergenic | 40.0% |
| ! | ATTACACGAACCGTGTCATT+CGG | - | Chr6:60205050-60205069 | None:intergenic | 40.0% |
| ! | GTGGTGATGTCAAATCACTT+AGG | + | Chr6:60204841-60204860 | MsG0680033237.01.T02:CDS | 40.0% |
| !! | AATGGGTTGCAGATCACTAA+AGG | - | Chr6:60204981-60205000 | None:intergenic | 40.0% |
| !! | ATAGGACAAGAAGCTGGTTT+TGG | + | Chr6:60205068-60205087 | MsG0680033237.01.T02:CDS | 40.0% |
| AAGTGCACCATTCACACAAG+TGG | - | Chr6:60205270-60205289 | None:intergenic | 45.0% | |
| AGGAAAAGGGAAAGTTGAGG+AGG | + | Chr6:60204509-60204528 | MsG0680033237.01.T02:CDS | 45.0% | |
| AGTGATCTGCAACCCATTCA+TGG | + | Chr6:60204983-60205002 | MsG0680033237.01.T02:CDS | 45.0% | |
| AGTGCACCATTCACACAAGT+GGG | - | Chr6:60205269-60205288 | None:intergenic | 45.0% | |
| AGTTCGTATGCCGAATGACA+CGG | + | Chr6:60205037-60205056 | MsG0680033237.01.T02:CDS | 45.0% | |
| ATATTCAGGCTTCCTCTTCG+TGG | + | Chr6:60204822-60204841 | MsG0680033237.01.T02:CDS | 45.0% | |
| ATCGCACTCAAGAAGGTAGA+GGG | - | Chr6:60204754-60204773 | None:intergenic | 45.0% | |
| CGAAGAGGAAGCCTGAATAT+AGG | - | Chr6:60204822-60204841 | None:intergenic | 45.0% | |
| CGTGTAATAGGACAAGAAGC+TGG | + | Chr6:60205062-60205081 | MsG0680033237.01.T02:CDS | 45.0% | |
| CTTGCTGAGATACACACACT+GGG | + | Chr6:60205182-60205201 | MsG0680033237.01.T02:CDS | 45.0% | |
| GATTTGACATCACCACGAAG+AGG | - | Chr6:60204837-60204856 | None:intergenic | 45.0% | |
| GTGATCTGCAACCCATTCAT+GGG | + | Chr6:60204984-60205003 | MsG0680033237.01.T02:CDS | 45.0% | |
| GTGTGAATGGTGCACTTCAT+TGG | + | Chr6:60205273-60205292 | MsG0680033237.01.T02:CDS | 45.0% | |
| TGATCTGCAACCCATTCATG+GGG | + | Chr6:60204985-60205004 | MsG0680033237.01.T02:CDS | 45.0% | |
| TTTCAGGATCGCACTCAAGA+AGG | - | Chr6:60204761-60204780 | None:intergenic | 45.0% | |
| ! | ATCTTTGGCTAGCCCTAACA+GGG | - | Chr6:60204482-60204501 | None:intergenic | 45.0% |
| ACACACTGGGAACACCAACA+TGG | + | Chr6:60205195-60205214 | MsG0680033237.01.T02:CDS | 50.0% | |
| AGGGTTCAATCACCCCTGTT+AGG | + | Chr6:60204466-60204485 | MsG0680033237.01.T02:CDS | 50.0% | |
| CCAGTGTGTGTATCTCAGCA+AGG | - | Chr6:60205184-60205203 | None:intergenic | 50.0% | |
| CCTTGCTGAGATACACACAC+TGG | + | Chr6:60205181-60205200 | MsG0680033237.01.T02:CDS | 50.0% | |
| GATCGCACTCAAGAAGGTAG+AGG | - | Chr6:60204755-60204774 | None:intergenic | 50.0% | |
| GATCTGCAACCCATTCATGG+GGG | + | Chr6:60204986-60205005 | MsG0680033237.01.T02:CDS | 50.0% | |
| GGGTTCAATCACCCCTGTTA+GGG | + | Chr6:60204467-60204486 | MsG0680033237.01.T02:CDS | 50.0% | |
| ! | CATCTTTGGCTAGCCCTAAC+AGG | - | Chr6:60204483-60204502 | None:intergenic | 50.0% |
| ! | TCTTTGGCTAGCCCTAACAG+GGG | - | Chr6:60204481-60204500 | None:intergenic | 50.0% |
| ACATGACTGCCAACCCCAAC+TGG | - | Chr6:60205376-60205395 | None:intergenic | 55.0% | |
| ATGACTGCCAACCCCAACTG+GGG | - | Chr6:60205374-60205393 | None:intergenic | 55.0% | |
| ATTTCCCTCTCCCCCAGTTG+GGG | + | Chr6:60205360-60205379 | MsG0680033237.01.T02:CDS | 55.0% | |
| CAAAATGTGGGCGGTGAGGT+GGG | - | Chr6:60204577-60204596 | None:intergenic | 55.0% | |
| CATGACTGCCAACCCCAACT+GGG | - | Chr6:60205375-60205394 | None:intergenic | 55.0% | |
| CATTTCCCTCTCCCCCAGTT+GGG | + | Chr6:60205359-60205378 | MsG0680033237.01.T02:CDS | 55.0% | |
| GAACACATGCTCAGAGTCCG+AGG | - | Chr6:60205162-60205181 | None:intergenic | 55.0% | |
| GAAGCAAAATGTGGGCGGTG+AGG | - | Chr6:60204581-60204600 | None:intergenic | 55.0% | |
| TCATTTCCCTCTCCCCCAGT+TGG | + | Chr6:60205358-60205377 | MsG0680033237.01.T02:CDS | 55.0% | |
| GCAAAATGTGGGCGGTGAGG+TGG | - | Chr6:60204578-60204597 | None:intergenic | 60.0% | |
| TGACTGCCAACCCCAACTGG+GGG | - | Chr6:60205373-60205392 | None:intergenic | 60.0% | |
| ! | TGGGGTTGGCAGTCATGTCC+AGG | + | Chr6:60205378-60205397 | MsG0680033237.01.T02:CDS | 60.0% |
| ATGTGGGCGGTGAGGTGGGA+TGG | - | Chr6:60204573-60204592 | None:intergenic | 65.0% | |
| CCAACCCCAACTGGGGGAGA+GGG | - | Chr6:60205367-60205386 | None:intergenic | 65.0% | |
| CCCTCTCCCCCAGTTGGGGT+TGG | + | Chr6:60205364-60205383 | MsG0680033237.01.T02:CDS | 70.0% | |
| GCCAACCCCAACTGGGGGAG+AGG | - | Chr6:60205368-60205387 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 60204453 | 60205460 | 60204453 | ID=MsG0680033237.01;Name=MsG0680033237.01 |
| Chr6 | mRNA | 60204453 | 60205460 | 60204453 | ID=MsG0680033237.01.T01;Parent=MsG0680033237.01;Name=MsG0680033237.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|0|0|2|0|322 |
| Chr6 | exon | 60204870 | 60205460 | 60204870 | ID=MsG0680033237.01.T01:exon:19530;Parent=MsG0680033237.01.T01 |
| Chr6 | exon | 60204453 | 60204830 | 60204453 | ID=MsG0680033237.01.T01:exon:19529;Parent=MsG0680033237.01.T01 |
| Chr6 | CDS | 60204453 | 60204830 | 60204453 | ID=MsG0680033237.01.T01:cds;Parent=MsG0680033237.01.T01 |
| Chr6 | CDS | 60204870 | 60205460 | 60204870 | ID=MsG0680033237.01.T01:cds;Parent=MsG0680033237.01.T01 |
| Chr6 | mRNA | 60204453 | 60205460 | 60204453 | ID=MsG0680033237.01.T02;Parent=MsG0680033237.01;Name=MsG0680033237.01.T02;_AED=0.49;_eAED=0.52;_QI=0|-1|0|1|-1|0|1|0|335 |
| Chr6 | exon | 60204453 | 60205460 | 60204453 | ID=MsG0680033237.01.T02:exon:19531;Parent=MsG0680033237.01.T02 |
| Chr6 | CDS | 60204453 | 60205460 | 60204453 | ID=MsG0680033237.01.T02:cds;Parent=MsG0680033237.01.T02 |
| Gene Sequence |
| Protein sequence |
