AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038460.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038460.01.T01 MTR_7g056260 81.979 283 21 3 3 258 38 317 1.07e-156 442
MsG0780038460.01.T01 MTR_2g043410 54.474 380 126 9 3 342 46 418 1.19e-132 385
MsG0780038460.01.T01 MTR_7g056290 53.646 384 125 12 3 341 46 421 4.33e-125 365
MsG0780038460.01.T01 MTR_7g056003 53.968 378 129 12 3 342 39 409 1.49e-121 356
MsG0780038460.01.T01 MTR_2g043400 52.493 381 132 9 3 342 47 419 9.89e-121 354
MsG0780038460.01.T01 MTR_7g056390 52.219 383 130 12 3 340 42 416 2.13e-119 351
MsG0780038460.01.T01 MTR_3g072470 51.832 382 135 12 3 341 43 418 3.31e-117 345
MsG0780038460.01.T01 MTR_0464s0020 50.633 395 129 13 3 342 47 430 8.44e-112 332
MsG0780038460.01.T01 MTR_3g437520 51.070 374 115 12 3 322 47 406 5.93e-106 318
MsG0780038460.01.T01 MTR_7g055987 51.948 308 106 10 3 287 44 332 2.33e-90 275
MsG0780038460.01.T01 MTR_5g069760 43.597 367 151 13 3 340 30 369 3.31e-88 270
MsG0780038460.01.T01 MTR_7g057270 42.400 375 166 10 4 340 51 413 3.13e-85 264
MsG0780038460.01.T01 MTR_7g091630 42.487 386 169 12 3 343 56 433 1.47e-82 257
MsG0780038460.01.T01 MTR_1g442850 43.396 371 151 14 4 340 30 375 3.39e-81 252
MsG0780038460.01.T01 MTR_7g050520 42.818 369 155 13 2 339 45 388 1.15e-80 251
MsG0780038460.01.T01 MTR_7g056717 42.703 370 153 15 2 340 44 385 3.24e-80 249
MsG0780038460.01.T01 MTR_7g055870 40.695 403 161 12 4 342 38 426 4.98e-80 250
MsG0780038460.01.T01 MTR_7g050480 42.276 369 157 13 2 339 45 388 1.85e-78 245
MsG0780038460.01.T01 MTR_7g055930 40.394 406 158 13 4 342 38 426 2.13e-78 246
MsG0780038460.01.T01 MTR_7g056760 41.333 375 168 12 3 341 47 405 9.86e-78 244
MsG0780038460.01.T01 MTR_5g069930 39.837 369 167 12 3 339 30 375 1.29e-77 243
MsG0780038460.01.T01 MTR_4g013185 39.494 395 169 12 8 340 39 425 3.55e-77 243
MsG0780038460.01.T01 MTR_7g056503 41.398 372 157 13 8 341 50 398 5.39e-77 242
MsG0780038460.01.T01 MTR_6g042600 44.737 342 100 13 3 336 60 320 5.47e-77 242
MsG0780038460.01.T01 MTR_3g080370 41.818 385 165 13 4 341 46 418 5.14e-76 241
MsG0780038460.01.T01 MTR_7g077910 44.638 345 132 11 43 340 3 335 3.96e-75 235
MsG0780038460.01.T01 MTR_7g061090 41.645 377 162 16 4 340 47 405 6.60e-75 237
MsG0780038460.01.T01 MTR_1g088120 39.642 391 165 12 7 342 38 412 1.34e-74 236
MsG0780038460.01.T01 MTR_6g055210 38.961 385 177 10 4 341 47 420 1.45e-74 237
MsG0780038460.01.T01 MTR_4g033495 40.323 372 166 13 3 338 51 402 1.60e-74 237
MsG0780038460.01.T01 MTR_4g129190 41.019 373 170 14 4 340 31 389 2.08e-74 235
MsG0780038460.01.T01 MTR_4g013175 38.442 398 173 12 4 338 35 423 2.47e-74 236
MsG0780038460.01.T01 MTR_4g034860 39.831 354 162 10 7 320 50 392 3.86e-74 234
MsG0780038460.01.T01 MTR_7g061060 42.486 346 154 14 4 320 38 367 5.15e-74 234
MsG0780038460.01.T01 MTR_7g061050 41.417 367 164 14 4 340 38 383 6.12e-74 233
MsG0780038460.01.T01 MTR_8g066440 39.895 381 162 11 4 342 48 403 6.16e-74 234
MsG0780038460.01.T01 MTR_7g056737 42.319 345 149 12 4 320 47 369 5.57e-73 232
MsG0780038460.01.T01 MTR_0128s0010 39.130 368 173 13 8 342 50 399 1.03e-72 231
MsG0780038460.01.T01 MTR_7g060940 39.623 371 166 14 3 339 46 392 1.61e-72 230
MsG0780038460.01.T01 MTR_4g011660 38.205 390 178 10 3 342 43 419 1.75e-72 231
MsG0780038460.01.T01 MTR_7g056710 41.689 367 153 17 4 339 43 379 6.54e-72 228
MsG0780038460.01.T01 MTR_5g056020 40.102 394 166 13 4 341 42 421 1.78e-71 231
MsG0780038460.01.T01 MTR_7g052150 39.566 369 177 14 2 339 45 398 1.58e-70 225
MsG0780038460.01.T01 MTR_7g078040 38.875 409 168 12 4 340 34 432 2.50e-70 226
MsG0780038460.01.T01 MTR_5g068040 38.904 365 170 10 3 339 40 379 3.89e-70 224
MsG0780038460.01.T01 MTR_4g024890 39.946 368 172 14 4 340 35 384 4.03e-70 224
MsG0780038460.01.T01 MTR_5g043160 39.646 396 169 11 4 341 75 458 4.95e-70 226
MsG0780038460.01.T01 MTR_7g062100 41.962 367 164 15 4 340 49 396 1.29e-69 223
MsG0780038460.01.T01 MTR_7g055977 40.323 372 166 14 3 340 31 380 2.24e-69 222
MsG0780038460.01.T01 MTR_7g078900 38.636 396 174 14 4 340 37 422 6.40e-69 222
MsG0780038460.01.T01 MTR_7g056200 38.649 370 164 11 3 342 47 383 8.09e-69 220
MsG0780038460.01.T01 MTR_2g010950 38.196 377 178 12 3 340 44 404 1.97e-68 220
MsG0780038460.01.T01 MTR_6g086920 37.440 414 177 12 4 341 63 470 3.72e-68 222
MsG0780038460.01.T01 MTR_0242s0060 38.442 398 168 15 4 339 34 416 5.80e-68 219
MsG0780038460.01.T01 MTR_0242s0040 38.442 398 168 15 4 339 34 416 5.80e-68 219
MsG0780038460.01.T01 MTR_3g013470 40.000 380 153 14 4 335 20 372 6.08e-68 218
MsG0780038460.01.T01 MTR_7g066850 40.270 370 179 12 3 341 47 405 8.36e-68 220
MsG0780038460.01.T01 MTR_5g096710 38.814 371 175 12 5 342 49 400 1.20e-67 218
MsG0780038460.01.T01 MTR_7g022600 39.175 388 173 14 4 341 48 422 2.00e-67 218
MsG0780038460.01.T01 MTR_7g062060 39.687 383 165 14 4 340 37 399 2.65e-67 217
MsG0780038460.01.T01 MTR_0128s0070 39.612 361 181 9 4 339 47 395 3.79e-67 216
MsG0780038460.01.T01 MTR_4g030830 39.096 376 176 13 4 341 34 394 3.90e-67 216
MsG0780038460.01.T01 MTR_2g047200 39.410 373 168 16 4 341 45 394 5.92e-67 216
MsG0780038460.01.T01 MTR_7g060960 40.385 364 139 13 2 339 55 366 1.82e-66 214
MsG0780038460.01.T01 MTR_7g070830 37.406 401 161 14 4 340 46 420 3.28e-66 214
MsG0780038460.01.T01 MTR_0128s0020 41.322 363 173 11 4 339 43 392 6.12e-66 213
MsG0780038460.01.T01 MTR_3g464470 37.838 370 179 11 4 342 32 381 7.12e-66 213
MsG0780038460.01.T01 MTR_6g016285 37.726 387 178 13 4 341 46 418 8.64e-66 214
MsG0780038460.01.T01 MTR_2g010920 37.056 394 179 13 3 340 44 424 9.59e-66 214
MsG0780038460.01.T01 MTR_4g019990 37.166 374 184 10 4 341 31 389 1.47e-65 212
MsG0780038460.01.T01 MTR_3g464500 39.892 371 173 15 4 342 52 404 1.57e-65 213
MsG0780038460.01.T01 MTR_4g031020 35.750 400 184 10 4 341 40 428 1.66e-65 213
MsG0780038460.01.T01 MTR_6g065510 47.232 271 101 10 100 340 72 330 2.01e-65 210
MsG0780038460.01.T01 MTR_2g047892 39.189 370 174 12 4 341 47 397 2.64e-65 212
MsG0780038460.01.T01 MTR_7g079160 38.642 383 157 16 4 321 33 402 4.10e-65 213
MsG0780038460.01.T01 MTR_7g077070 38.191 398 176 15 4 340 41 429 5.57e-65 212
MsG0780038460.01.T01 MTR_7g077970 37.406 401 176 13 4 340 32 421 1.22e-64 211
MsG0780038460.01.T01 MTR_7g035295 38.843 363 178 13 3 342 40 381 2.13e-64 209
MsG0780038460.01.T01 MTR_0649s0020 37.867 375 174 11 4 341 36 388 2.19e-64 209
MsG0780038460.01.T01 MTR_4g030980 35.000 400 187 10 4 341 40 428 3.58e-64 209
MsG0780038460.01.T01 MTR_0097s0030 38.503 374 170 11 4 341 39 388 3.74e-64 208
MsG0780038460.01.T01 MTR_2g047240 38.503 374 170 11 4 341 39 388 3.74e-64 208
MsG0780038460.01.T01 MTR_7g056570 38.398 362 176 11 4 340 43 382 4.75e-64 209
MsG0780038460.01.T01 MTR_7g066100 39.267 382 163 16 4 340 36 393 1.20e-63 207
MsG0780038460.01.T01 MTR_7g091640 43.345 293 125 9 7 262 60 348 1.93e-63 206
MsG0780038460.01.T01 MTR_7g061010 40.274 365 166 11 3 339 46 386 2.07e-63 206
MsG0780038460.01.T01 MTR_7g078840 37.438 406 176 14 4 340 35 431 3.19e-63 207
MsG0780038460.01.T01 MTR_7g070880 37.157 401 162 15 4 340 46 420 3.93e-63 207
MsG0780038460.01.T01 MTR_4g013180 41.463 369 131 17 4 320 36 371 6.65e-63 207
MsG0780038460.01.T01 MTR_7g052670 39.055 402 161 18 3 341 45 425 8.23e-63 206
MsG0780038460.01.T01 MTR_7g056797 40.267 375 170 16 3 341 47 403 1.67e-62 204
MsG0780038460.01.T01 MTR_1g071010 37.197 371 179 13 4 342 40 388 2.26e-62 204
MsG0780038460.01.T01 MTR_7g055830 40.798 326 130 9 70 342 43 358 2.82e-62 202
MsG0780038460.01.T01 MTR_2g047878 39.377 353 167 12 3 341 45 364 3.67e-62 202
MsG0780038460.01.T01 MTR_7g066030 38.320 381 167 14 4 340 46 402 4.55e-62 203
MsG0780038460.01.T01 MTR_7g066000 38.032 376 169 14 4 339 50 401 4.70e-62 203
MsG0780038460.01.T01 MTR_6g017280 39.788 377 170 12 3 342 33 389 1.61e-61 201
MsG0780038460.01.T01 MTR_7g078860 39.665 358 161 13 4 320 34 377 1.90e-61 201
MsG0780038460.01.T01 MTR_7g055953 49.580 238 85 9 126 340 89 314 3.28e-61 199
MsG0780038460.01.T01 MTR_0707s0020 36.341 410 173 12 4 341 51 444 4.07e-61 202
MsG0780038460.01.T01 MTR_1g112010 39.888 356 168 15 1 341 1 325 4.07e-61 199
MsG0780038460.01.T01 MTR_6g017270 39.167 360 147 14 4 342 34 342 2.78e-60 197
MsG0780038460.01.T01 MTR_7g113500 36.915 363 171 12 16 340 39 381 3.28e-60 198
MsG0780038460.01.T01 MTR_4g008790 36.898 374 158 11 4 321 64 415 3.74e-60 200
MsG0780038460.01.T01 MTR_7g077990 38.522 379 158 14 4 337 42 390 5.66e-60 198
MsG0780038460.01.T01 MTR_4g030090 37.433 374 186 14 4 341 39 400 1.46e-59 197
MsG0780038460.01.T01 MTR_7g066840 37.466 371 181 12 3 341 47 398 2.76e-59 196
MsG0780038460.01.T01 MTR_7g445890 36.719 384 160 12 3 342 40 384 5.94e-59 195
MsG0780038460.01.T01 MTR_2g437110 41.067 375 158 18 3 341 46 393 1.13e-58 197
MsG0780038460.01.T01 MTR_2g010900 38.209 335 147 13 3 292 7 326 2.31e-58 193
MsG0780038460.01.T01 MTR_6g092560 35.696 381 187 14 1 341 34 396 2.44e-58 195
MsG0780038460.01.T01 MTR_7g028660 34.771 371 180 10 4 340 36 378 2.77e-58 193
MsG0780038460.01.T01 MTR_4g129160 39.053 338 148 13 4 293 33 360 1.81e-57 190
MsG0780038460.01.T01 MTR_7g009265 39.697 330 155 10 51 342 2 325 2.02e-55 184
MsG0780038460.01.T01 MTR_7g066060 34.545 385 182 14 4 342 48 408 1.31e-54 187
MsG0780038460.01.T01 MTR_1g029650 36.939 379 187 15 4 339 33 402 2.22e-54 183
MsG0780038460.01.T01 MTR_7g056173 43.775 249 102 6 122 338 22 264 6.59e-54 180
MsG0780038460.01.T01 MTR_4g030760 36.338 355 188 13 4 341 98 431 2.30e-53 181
MsG0780038460.01.T01 MTR_2g047895 38.608 316 127 13 61 335 16 305 5.78e-53 178
MsG0780038460.01.T01 MTR_5g058620 45.312 256 91 10 126 339 32 280 1.03e-52 176
MsG0780038460.01.T01 MTR_1g058870 45.312 256 91 10 126 339 32 280 1.03e-52 176
MsG0780038460.01.T01 MTR_7g066080 34.456 386 196 12 4 342 41 416 1.60e-52 180
MsG0780038460.01.T01 MTR_7g066010 35.340 382 144 15 4 340 46 369 1.78e-52 177
MsG0780038460.01.T01 MTR_7g022670 34.890 364 153 11 3 341 47 351 2.31e-52 177
MsG0780038460.01.T01 MTR_7g056170 34.793 411 147 15 3 341 99 460 2.45e-52 179
MsG0780038460.01.T01 MTR_2g006360 35.530 349 156 12 3 339 70 361 1.51e-50 172
MsG0780038460.01.T01 MTR_7g445750 39.100 289 126 8 4 247 48 331 1.54e-50 171
MsG0780038460.01.T01 MTR_6g017305 41.818 275 116 9 104 342 17 283 2.07e-50 169
MsG0780038460.01.T01 MTR_6g017295 39.275 331 150 12 51 333 12 339 2.33e-50 176
MsG0780038460.01.T01 MTR_5g011350 46.829 205 85 6 46 230 38 238 6.58e-50 167
MsG0780038460.01.T01 MTR_7g034310 47.009 234 83 8 126 340 16 227 1.22e-49 166
MsG0780038460.01.T01 MTR_1g015730 37.302 378 177 16 4 339 34 393 1.01e-47 166
MsG0780038460.01.T01 MTR_2g461450 37.025 316 158 11 4 299 43 337 8.07e-47 162
MsG0780038460.01.T01 MTR_6g088385 39.510 286 120 8 95 341 48 319 1.86e-46 160
MsG0780038460.01.T01 MTR_7g006360 32.277 347 126 10 4 343 34 278 2.85e-45 156
MsG0780038460.01.T01 MTR_4g030110 33.609 363 172 12 4 329 55 385 3.08e-45 159
MsG0780038460.01.T01 MTR_2g027820 35.000 340 169 11 4 339 8 299 5.17e-45 156
MsG0780038460.01.T01 MTR_4g037465 32.361 377 184 16 4 339 46 392 3.69e-44 156
MsG0780038460.01.T01 MTR_1g015740 34.085 355 153 10 4 339 33 325 1.61e-43 153
MsG0780038460.01.T01 MTR_7g037670 34.903 361 135 16 4 340 48 332 1.92e-43 153
MsG0780038460.01.T01 MTR_1g047490 37.276 279 136 9 3 259 46 307 3.71e-43 152
MsG0780038460.01.T01 MTR_7g078960 36.913 298 137 11 86 342 1 288 6.64e-43 150
MsG0780038460.01.T01 MTR_7g056820 31.781 365 197 11 4 339 32 373 1.77e-40 146
MsG0780038460.01.T01 MTR_2g010935 38.813 219 112 7 132 340 43 249 2.76e-38 137
MsG0780038460.01.T01 MTR_7g091610 44.444 162 80 3 183 343 97 249 1.58e-37 135
MsG0780038460.01.T01 MTR_7g050490 46.784 171 67 7 2 161 31 188 6.98e-37 131
MsG0780038460.01.T01 MTR_8g101940 32.000 375 185 16 4 341 27 368 9.63e-37 136
MsG0780038460.01.T01 MTR_5g069950 41.176 187 78 7 101 268 34 207 1.02e-36 132
MsG0780038460.01.T01 MTR_6g081280 36.694 248 106 8 123 340 14 240 3.60e-36 131
MsG0780038460.01.T01 MTR_0267s0050 31.551 374 196 18 4 339 31 382 6.76e-36 134
MsG0780038460.01.T01 MTR_3g013950 30.789 380 193 18 4 339 31 384 8.96e-36 134
MsG0780038460.01.T01 MTR_7g056023 38.356 219 98 7 46 233 56 268 8.20e-35 129
MsG0780038460.01.T01 MTR_7g056793 36.889 225 96 10 123 339 44 230 1.01e-34 127
MsG0780038460.01.T01 MTR_7g061940 38.914 221 100 8 110 311 62 266 1.30e-34 128
MsG0780038460.01.T01 MTR_4g030790 39.070 215 98 9 78 261 75 287 3.45e-34 129
MsG0780038460.01.T01 MTR_7g070440 31.467 375 182 12 4 339 32 370 4.51e-34 129
MsG0780038460.01.T01 MTR_4g128320 37.402 254 88 11 101 320 42 258 6.93e-34 126
MsG0780038460.01.T01 MTR_2g017720 35.743 249 115 11 118 336 63 296 7.41e-34 129
MsG0780038460.01.T01 MTR_7g030040 35.338 266 116 7 79 341 125 337 2.67e-33 126
MsG0780038460.01.T01 MTR_7g078940 31.296 409 145 15 4 340 57 401 1.26e-32 125
MsG0780038460.01.T01 MTR_2g060555 37.262 263 105 12 101 332 46 279 4.07e-32 121
MsG0780038460.01.T01 MTR_8g030630 40.462 173 87 6 147 317 281 439 2.74e-31 122
MsG0780038460.01.T01 MTR_8g030630 37.500 184 96 5 144 326 80 245 4.22e-26 108
MsG0780038460.01.T01 MTR_4g006350 29.697 330 175 11 47 338 562 872 2.89e-30 122
MsG0780038460.01.T01 MTR_2g021150 30.245 367 191 14 3 340 38 368 4.56e-29 115
MsG0780038460.01.T01 MTR_7g058630 42.038 157 80 4 187 342 35 181 8.15e-29 110
MsG0780038460.01.T01 MTR_7g078880 30.079 379 123 13 2 337 32 311 6.02e-28 112
MsG0780038460.01.T01 MTR_4g020000 34.855 241 112 8 115 324 101 327 8.02e-28 112
MsG0780038460.01.T01 MTR_2g021190 33.096 281 148 9 3 258 45 310 1.65e-27 111
MsG0780038460.01.T01 MTR_6g021880 30.195 308 182 9 3 284 44 344 7.69e-27 109
MsG0780038460.01.T01 MTR_2g029990 30.351 313 182 11 3 290 75 376 1.26e-26 109
MsG0780038460.01.T01 MTR_1g094210 31.734 271 149 9 3 256 81 332 1.85e-26 108
MsG0780038460.01.T01 MTR_1g094210 31.734 271 149 9 3 256 81 332 1.96e-26 108
MsG0780038460.01.T01 MTR_0128s0110 33.333 213 106 8 149 339 4 202 1.99e-26 104
MsG0780038460.01.T01 MTR_7g066830 39.881 168 90 5 3 165 19 180 6.53e-26 102
MsG0780038460.01.T01 MTR_7g061100 35.747 221 86 8 4 204 38 222 9.89e-26 105
MsG0780038460.01.T01 MTR_8g467140 33.808 281 147 12 3 260 56 320 2.95e-25 104
MsG0780038460.01.T01 MTR_4g024910 45.390 141 69 5 4 143 8 141 4.36e-25 103
MsG0780038460.01.T01 MTR_4g024910 38.776 147 77 5 194 339 130 264 1.73e-18 85.5
MsG0780038460.01.T01 MTR_4g024870 34.043 235 114 6 4 203 69 297 6.49e-25 104
MsG0780038460.01.T01 MTR_1g097560 28.519 270 172 7 3 263 60 317 7.75e-25 103
MsG0780038460.01.T01 MTR_2g021155 32.028 281 145 11 3 256 60 321 7.83e-25 106
MsG0780038460.01.T01 MTR_2g021155 28.761 226 121 8 83 280 695 908 6.05e-16 79.3
MsG0780038460.01.T01 MTR_1g016960 30.380 316 133 12 38 339 12 254 2.17e-24 100
MsG0780038460.01.T01 MTR_3g055000 37.333 150 68 5 193 340 1 126 5.74e-24 95.5
MsG0780038460.01.T01 MTR_7g013590 28.841 371 202 13 4 340 61 403 9.88e-24 101
MsG0780038460.01.T01 MTR_3g036290 35.233 193 96 8 79 257 117 294 1.36e-23 100
MsG0780038460.01.T01 MTR_3g007360 31.228 285 149 13 3 259 76 341 1.31e-22 98.2
MsG0780038460.01.T01 MTR_4g061340 31.228 285 150 12 3 258 50 317 1.45e-22 97.4
MsG0780038460.01.T01 MTR_2g046920 29.893 281 159 11 3 261 48 312 1.66e-22 97.4
MsG0780038460.01.T01 MTR_3g007410 31.818 286 146 14 3 259 76 341 1.77e-22 97.8
MsG0780038460.01.T01 MTR_3g030350 27.577 359 210 12 4 340 60 390 2.00e-22 97.4
MsG0780038460.01.T01 MTR_7g407070 29.333 300 156 12 3 260 56 341 2.80e-22 97.1
MsG0780038460.01.T01 MTR_3g010970 29.513 349 206 14 3 340 72 391 3.07e-22 97.1
MsG0780038460.01.T01 MTR_7g022580 58.571 70 27 1 48 115 22 91 3.71e-22 92.0
MsG0780038460.01.T01 MTR_6g007135 26.923 364 214 14 4 340 51 389 4.27e-22 96.3
MsG0780038460.01.T01 MTR_7g021580 29.014 355 126 15 2 340 56 300 4.62e-22 95.1
MsG0780038460.01.T01 MTR_0354s0030 47.573 103 47 3 241 342 1 97 5.55e-22 89.4
MsG0780038460.01.T01 MTR_3g014570 32.872 289 141 17 3 260 53 319 6.37e-22 95.9
MsG0780038460.01.T01 MTR_3g007330 31.429 280 146 13 3 258 72 329 6.54e-22 95.9
MsG0780038460.01.T01 MTR_6g065980 27.577 359 199 12 3 340 40 358 1.36e-21 94.7
MsG0780038460.01.T01 MTR_3g009240 31.148 244 133 9 80 298 127 360 1.37e-21 94.7
MsG0780038460.01.T01 MTR_3g024040 30.403 273 154 12 3 259 55 307 1.43e-21 94.7
MsG0780038460.01.T01 MTR_2g021252 29.562 274 153 11 3 258 71 322 1.46e-21 94.7
MsG0780038460.01.T01 MTR_8g101580 27.507 349 186 12 3 319 70 383 2.35e-21 94.4
MsG0780038460.01.T01 MTR_3g030310 29.620 368 205 17 4 340 46 390 2.55e-21 94.4
MsG0780038460.01.T01 MTR_3g006570 30.142 282 152 9 3 258 45 307 2.71e-21 94.0
MsG0780038460.01.T01 MTR_3g013770 31.359 287 144 15 3 256 57 323 3.64e-21 94.0
MsG0780038460.01.T01 MTR_3g083640 30.693 303 165 12 3 280 79 361 5.22e-21 93.6
MsG0780038460.01.T01 MTR_4g031770 26.558 369 212 16 3 340 28 368 5.67e-21 92.8
MsG0780038460.01.T01 MTR_3g014540 32.872 289 137 17 3 258 53 317 6.62e-21 92.8
MsG0780038460.01.T01 MTR_5g022420 27.707 314 177 13 3 297 51 333 9.39e-21 92.4
MsG0780038460.01.T01 MTR_3g006530 27.401 354 212 14 7 340 68 396 1.84e-20 91.7
MsG0780038460.01.T01 MTR_3g436150 28.475 295 159 12 3 260 56 335 2.86e-20 91.3
MsG0780038460.01.T01 MTR_6g048150 44.000 100 49 1 238 337 13 105 3.84e-20 85.5
MsG0780038460.01.T01 MTR_3g011060 29.936 314 169 15 3 280 52 350 4.23e-20 90.9
MsG0780038460.01.T01 MTR_2g078900 32.210 267 162 9 3 258 57 315 4.30e-20 90.5
MsG0780038460.01.T01 MTR_5g070380 38.519 135 67 4 7 132 44 171 5.08e-20 86.7
MsG0780038460.01.T01 MTR_3g011020 28.763 299 129 11 3 259 52 308 5.74e-20 90.1
MsG0780038460.01.T01 MTR_1g097490 28.329 353 188 15 3 327 73 388 5.85e-20 90.5
MsG0780038460.01.T01 MTR_6g007150 32.000 200 107 6 79 254 69 263 6.21e-20 89.7
MsG0780038460.01.T01 MTR_3g006640 29.730 222 107 6 78 262 17 226 7.82e-20 88.6
MsG0780038460.01.T01 MTR_3g009310 30.909 275 157 11 3 257 66 327 1.15e-19 89.4
MsG0780038460.01.T01 MTR_3g024110 30.515 272 156 10 3 258 125 379 1.25e-19 89.7
MsG0780038460.01.T01 MTR_7g089830 43.966 116 49 3 185 298 31 132 1.38e-19 84.3
MsG0780038460.01.T01 MTR_6g048140 28.338 367 211 16 4 343 64 405 1.40e-19 89.4
MsG0780038460.01.T01 MTR_1g046600 40.000 165 69 7 4 147 72 227 1.81e-19 87.8
MsG0780038460.01.T01 MTR_6g004660 30.389 283 164 8 3 258 40 316 2.19e-19 88.6
MsG0780038460.01.T01 MTR_3g024150 29.097 299 174 12 3 280 59 340 2.20e-19 88.6
MsG0780038460.01.T01 MTR_2g055970 29.373 303 177 11 3 283 235 522 2.75e-19 89.4
MsG0780038460.01.T01 MTR_5g046300 27.171 357 205 16 4 340 29 350 3.68e-19 87.4
MsG0780038460.01.T01 MTR_5g046290 27.171 357 205 16 4 340 29 350 3.68e-19 87.4
MsG0780038460.01.T01 MTR_7g066040 34.574 188 72 7 64 204 13 196 3.93e-19 85.9
MsG0780038460.01.T01 MTR_1g097330 29.021 286 164 11 3 264 40 310 4.79e-19 87.8
MsG0780038460.01.T01 MTR_6g053260 28.674 279 161 11 4 258 362 626 5.45e-19 88.6
MsG0780038460.01.T01 MTR_1g050542 30.035 283 154 13 1 261 80 340 5.60e-19 87.4
MsG0780038460.01.T01 MTR_3g010920 28.198 344 211 12 3 340 68 381 6.52e-19 87.0
MsG0780038460.01.T01 MTR_7g055850 35.260 173 70 6 4 143 38 201 6.73e-19 85.9
MsG0780038460.01.T01 MTR_8g030660 33.971 209 88 8 4 169 52 253 7.70e-19 85.5
MsG0780038460.01.T01 MTR_4g107820 29.044 272 161 9 3 256 60 317 8.74e-19 87.0
MsG0780038460.01.T01 MTR_4g107780 29.044 272 161 9 3 256 60 317 8.74e-19 87.0
MsG0780038460.01.T01 MTR_4g107780 29.044 272 161 9 3 256 60 317 1.01e-18 87.0
MsG0780038460.01.T01 MTR_3g007270 32.338 201 106 7 80 257 151 344 1.02e-18 87.0
MsG0780038460.01.T01 MTR_4g107820 29.044 272 161 9 3 256 60 317 1.14e-18 86.7
MsG0780038460.01.T01 MTR_3g010620 29.502 261 162 8 3 256 60 305 1.26e-18 86.7
MsG0780038460.01.T01 MTR_5g011200 28.490 351 191 18 3 317 41 367 1.63e-18 85.9
MsG0780038460.01.T01 MTR_4g053470 28.981 314 139 11 5 296 48 299 1.99e-18 85.1
MsG0780038460.01.T01 MTR_0760s0010 27.762 353 212 13 3 343 71 392 2.08e-18 85.9
MsG0780038460.01.T01 MTR_2g078870 28.322 286 171 10 71 340 40 307 2.69e-18 84.7
MsG0780038460.01.T01 MTR_2g046800 29.139 302 162 11 3 260 38 331 4.01e-18 85.1
MsG0780038460.01.T01 MTR_3g010590 29.758 289 162 14 3 274 63 327 7.61e-18 84.0
MsG0780038460.01.T01 MTR_3g030320 32.243 214 118 9 67 263 31 234 1.30e-17 82.4
MsG0780038460.01.T01 MTR_2g046830 28.929 280 163 10 3 261 49 313 1.35e-17 83.6
MsG0780038460.01.T01 MTR_3g013740 29.066 289 162 13 3 259 68 345 1.38e-17 83.6
MsG0780038460.01.T01 MTR_4g108820 27.885 312 137 10 3 291 66 312 1.70e-17 82.4
MsG0780038460.01.T01 MTR_1g054725 27.526 287 159 12 3 258 44 312 1.90e-17 82.8
MsG0780038460.01.T01 MTR_5g007610 28.956 297 147 14 3 258 65 338 2.20e-17 82.8
MsG0780038460.01.T01 MTR_1g057890 28.571 273 156 12 3 260 43 291 2.59e-17 82.4
MsG0780038460.01.T01 MTR_1g054575 29.710 276 160 12 4 261 77 336 2.99e-17 83.2
MsG0780038460.01.T01 MTR_2g043420 47.191 89 45 1 3 91 50 136 3.17e-17 78.2
MsG0780038460.01.T01 MTR_3g006670 27.946 297 162 11 3 268 73 348 5.16e-17 82.0
MsG0780038460.01.T01 MTR_6g053240 29.861 288 151 15 4 258 53 322 5.59e-17 81.6
MsG0780038460.01.T01 MTR_7g056723 39.823 113 59 4 62 166 19 130 1.55e-16 76.6
MsG0780038460.01.T01 MTR_7g078050 37.313 134 73 3 3 136 30 152 1.66e-16 78.6
MsG0780038460.01.T01 MTR_7g445580 60.656 61 23 1 202 261 42 102 1.69e-16 75.9
MsG0780038460.01.T01 MTR_5g009060 29.870 231 125 9 69 270 134 356 2.86e-16 79.7
MsG0780038460.01.T01 MTR_2g021210 29.545 308 178 14 4 290 109 398 3.45e-16 79.3
MsG0780038460.01.T01 MTR_0044s0300 29.167 288 144 13 3 258 62 321 4.24e-16 79.0
MsG0780038460.01.T01 MTR_1004s0010 27.675 271 160 9 82 343 119 362 5.69e-16 78.6
MsG0780038460.01.T01 MTR_5g046280 27.599 279 154 12 82 340 3 253 6.38e-16 77.0
MsG0780038460.01.T01 MTR_3g007430 33.333 213 97 12 79 259 132 331 6.53e-16 78.6
MsG0780038460.01.T01 MTR_5g057790 28.058 278 163 14 3 258 70 332 6.78e-16 78.6
MsG0780038460.01.T01 MTR_3g009260 30.935 278 146 14 4 258 66 320 1.02e-15 77.8
MsG0780038460.01.T01 MTR_1g056710 25.405 370 205 13 3 340 58 388 1.05e-15 77.8
MsG0780038460.01.T01 MTR_3g055070 35.115 131 58 5 193 321 1 106 1.19e-15 73.9
MsG0780038460.01.T01 MTR_4g006840 34.247 219 97 12 4 200 24 217 1.85e-15 75.1
MsG0780038460.01.T01 MTR_7g061012 33.582 134 61 2 6 139 1 106 1.99e-15 73.6
MsG0780038460.01.T01 MTR_6g004210 26.578 301 165 11 4 258 50 340 2.35e-15 77.0
MsG0780038460.01.T01 MTR_7g060930 52.459 61 28 1 185 244 18 78 2.50e-15 70.5
MsG0780038460.01.T01 MTR_6g027890 33.498 203 99 8 103 280 92 283 2.69e-15 76.3
MsG0780038460.01.T01 MTR_6g027910 29.252 294 152 12 3 256 33 310 5.00e-15 75.9
MsG0780038460.01.T01 MTR_7g056727 44.545 110 46 4 46 142 24 131 5.65e-15 73.6
MsG0780038460.01.T01 MTR_3g036430 25.352 355 192 14 3 340 44 342 7.44e-15 75.1
MsG0780038460.01.T01 MTR_2g078850 28.674 279 159 11 3 258 54 315 7.88e-15 75.1
MsG0780038460.01.T01 MTR_4g055060 29.553 291 155 14 3 262 54 325 9.20e-15 75.1
MsG0780038460.01.T01 MTR_3g010430 28.859 298 137 11 3 258 60 324 1.08e-14 75.1
MsG0780038460.01.T01 MTR_3g009300 31.034 203 104 10 80 257 98 289 4.24e-14 72.8
MsG0780038460.01.T01 MTR_3g030330 27.820 266 167 10 3 256 44 296 4.80e-14 72.8
MsG0780038460.01.T01 MTR_7g058660 37.168 113 64 3 226 336 103 210 5.65e-14 70.5
MsG0780038460.01.T01 MTR_7g058660 42.857 105 47 4 61 156 1 101 7.61e-12 64.3
MsG0780038460.01.T01 MTR_3g010390 29.054 296 153 16 3 257 57 336 7.51e-14 72.4
MsG0780038460.01.T01 MTR_3g024130 28.641 206 110 8 79 258 58 252 7.80e-14 71.6
MsG0780038460.01.T01 MTR_6g013270 26.902 368 217 14 3 343 53 395 1.01e-13 72.0
MsG0780038460.01.T01 MTR_7g067680 26.022 269 158 8 3 256 73 315 1.15e-13 71.6
MsG0780038460.01.T01 MTR_7g062070 37.500 120 60 5 196 311 75 183 1.21e-13 69.3
MsG0780038460.01.T01 MTR_3g058470 27.306 271 150 10 4 256 62 303 2.25e-13 70.9
MsG0780038460.01.T01 MTR_3g006500 29.180 305 168 14 3 280 41 324 3.47e-13 70.1
MsG0780038460.01.T01 MTR_1g114650 30.939 181 92 7 120 281 16 182 3.77e-13 68.6
MsG0780038460.01.T01 MTR_4g132560 31.677 161 81 4 128 261 39 197 4.81e-13 68.6
MsG0780038460.01.T01 MTR_6g014720 25.902 305 177 12 63 343 98 377 4.85e-13 69.7
MsG0780038460.01.T01 MTR_4g053510 43.529 85 45 2 3 87 46 127 9.90e-13 65.1
MsG0780038460.01.T01 MTR_3g007300 28.839 267 144 12 3 258 73 304 1.02e-12 68.9
MsG0780038460.01.T01 MTR_5g046260 25.430 291 159 14 4 281 29 274 3.01e-12 66.6
MsG0780038460.01.T01 MTR_1g115185 35.862 145 79 5 124 256 184 326 9.64e-12 65.9
MsG0780038460.01.T01 MTR_1g097510 30.120 166 87 6 104 261 64 208 9.82e-12 65.1
MsG0780038460.01.T01 MTR_2g046860 30.924 249 122 15 79 298 7 234 1.81e-11 64.7
MsG0780038460.01.T01 MTR_7g038710 43.548 62 30 1 280 341 92 148 2.91e-11 61.6
MsG0780038460.01.T01 MTR_6g048120 27.490 251 128 11 73 293 131 357 3.97e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 87 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAACCAAATGTGAATT+TGG 0.215133 7:-47144167 None:intergenic
CTCGGTTATTCTTCCGTTGC+CGG 0.252201 7:+47144061 MsG0780038460.01.T01:CDS
TGTCATCCATTTGTGAATAA+AGG 0.276068 7:+47144325 MsG0780038460.01.T01:CDS
TATTTCAACTAAAACTTATA+AGG 0.287812 7:+47144189 MsG0780038460.01.T01:CDS
AATTTGGAGTTCAAGATTCT+TGG 0.292046 7:+47144604 MsG0780038460.01.T01:CDS
AGAGAATTGCATGCTGATTA+TGG 0.303864 7:-47144782 None:intergenic
TTATGGAAGATGATGGAATT+TGG 0.305300 7:+47144588 MsG0780038460.01.T01:CDS
CGAAGGCGGGATCAGAGATT+AGG 0.333293 7:-47143817 None:intergenic
CGACGCACCAAATTCACATT+TGG 0.367478 7:+47144160 MsG0780038460.01.T01:CDS
ACGAAGCCAGTTTCTATTCC+CGG 0.374003 7:-47144080 None:intergenic
CCAGGCATGTCGGACCAGTT+AGG 0.377248 7:-47143890 None:intergenic
ATAACAAAGTGGGGAAAGTT+AGG 0.377608 7:+47144817 MsG0780038460.01.T01:CDS
TTTGATGTTGTGCCTCCTAA+TGG 0.385027 7:+47144298 MsG0780038460.01.T01:CDS
ACAACATCAAAAGGAACAAC+AGG 0.392273 7:-47144286 None:intergenic
TACACACCTTTATTCACAAA+TGG 0.401137 7:-47144331 None:intergenic
GAAGGCGGGATCAGAGATTA+GGG 0.402823 7:-47143816 None:intergenic
CAAGCTTTCAACATATTCTT+CGG 0.405777 7:-47144868 None:intergenic
CCGTTGCCGGGAATAGAAAC+TGG 0.406513 7:+47144074 MsG0780038460.01.T01:CDS
TCGGTTATTCTTCCGTTGCC+GGG 0.409949 7:+47144062 MsG0780038460.01.T01:CDS
AAGGAACAACAGGGAAACTT+TGG 0.410941 7:-47144276 None:intergenic
GAGTAGGAACACACTAATAA+TGG 0.415950 7:+47144737 MsG0780038460.01.T01:CDS
CGAAGAATATGTTGAAAGCT+TGG 0.420489 7:+47144869 MsG0780038460.01.T01:CDS
GCCTCGCACTTATCCCTAAC+TGG 0.421806 7:+47143876 MsG0780038460.01.T01:CDS
TGTGATTGTCTCGCTTGATC+TGG 0.426892 7:+47144440 MsG0780038460.01.T01:CDS
AGCATGCAATTCTCTATGAT+TGG 0.427258 7:+47144790 MsG0780038460.01.T01:CDS
AAGAGGAACTTACTTTCAAA+AGG 0.434001 7:-47144901 None:intergenic
GCCGTCGGTTACTGTATTGA+TGG 0.435640 7:+47144524 MsG0780038460.01.T01:CDS
AACTAAAACTTATAAGGTGG+TGG 0.439138 7:+47144195 MsG0780038460.01.T01:CDS
TCACCTTGGGTGATAATGTC+TGG 0.441121 7:+47144245 MsG0780038460.01.T01:CDS
TCAGATAATGCATGAGTGGC+CGG 0.445801 7:-47144112 None:intergenic
TTATCACTCATTAGATAGTA+AGG 0.447513 7:-47143992 None:intergenic
CTGCAACTCAAGTCCTGGCC+AGG 0.466579 7:-47143908 None:intergenic
CAGATAATGCATGAGTGGCC+GGG 0.470317 7:-47144111 None:intergenic
CAGGCATGTCGGACCAGTTA+GGG 0.471000 7:-47143889 None:intergenic
GTTAGGGATAAGTGCGAGGC+TGG 0.479168 7:-47143873 None:intergenic
AATGGATGACAATTGCCATT+AGG 0.480365 7:-47144313 None:intergenic
TGATTTCTGAAGACGCACTT+TGG 0.491301 7:-47143840 None:intergenic
AAGATGGTTGGTTCATGTAA+TGG 0.492076 7:+47144025 MsG0780038460.01.T01:CDS
CCTAACTGGTCCGACATGCC+TGG 0.494299 7:+47143890 MsG0780038460.01.T01:CDS
CTGAAGACGCACTTTGGCGA+AGG 0.496979 7:-47143834 None:intergenic
TTCCGCATCTTCTATTAAGC+GGG 0.499471 7:-47143951 None:intergenic
ATCTTCTATTAAGCGGGACA+TGG 0.500754 7:-47143945 None:intergenic
TTACTATCTAATGAGTGATA+AGG 0.507589 7:+47143994 MsG0780038460.01.T01:CDS
TTAGGAGGCACAACATCAAA+AGG 0.507738 7:-47144295 None:intergenic
CTGGTCCGACATGCCTGGCC+AGG 0.508694 7:+47143895 MsG0780038460.01.T01:CDS
CAATGTGAAAATTCTCACCT+TGG 0.509873 7:+47144231 MsG0780038460.01.T01:CDS
AAGAACAACTGAGAATCATA+TGG 0.510306 7:-47144693 None:intergenic
AATGGCTTGATTTGCTTGCT+CGG 0.512358 7:+47144043 MsG0780038460.01.T01:CDS
AAACTATTCTTGTTAGGCCA+TGG 0.514082 7:+47144136 MsG0780038460.01.T01:CDS
AATGTGAAAATTCTCACCTT+GGG 0.518427 7:+47144232 MsG0780038460.01.T01:CDS
TATTAAGCGGGACATGGGAA+AGG 0.539931 7:-47143939 None:intergenic
AAGACGCACTTTGGCGAAGG+CGG 0.541562 7:-47143831 None:intergenic
CATTGTGTGTTTCTGAGAGT+AGG 0.543599 7:+47144721 MsG0780038460.01.T01:CDS
TACTCTCAGAAACACACAAT+GGG 0.543760 7:-47144719 None:intergenic
TGATAAGGATTGTTGTAAGA+TGG 0.545415 7:+47144009 MsG0780038460.01.T01:CDS
AGACGCACTTTGGCGAAGGC+GGG 0.548679 7:-47143830 None:intergenic
CAACGCTGCAACTCAAGTCC+TGG 0.550519 7:-47143913 None:intergenic
CAACAGCTGCTGCCACCTGA+GGG 0.552196 7:+47144477 MsG0780038460.01.T01:CDS
GATTGGATAGATAACAAAGT+GGG 0.559449 7:+47144807 MsG0780038460.01.T01:CDS
TCCATAAAACAAAATAACCC+TGG 0.567870 7:-47144572 None:intergenic
ATAGTAAGGATCATTGTCAA+TGG 0.569828 7:-47143978 None:intergenic
ATTAAGCGGGACATGGGAAA+GGG 0.570232 7:-47143938 None:intergenic
AAGGATTGTTGTAAGATGGT+TGG 0.574667 7:+47144013 MsG0780038460.01.T01:CDS
TCAACAGCTGCTGCCACCTG+AGG 0.577890 7:+47144476 MsG0780038460.01.T01:CDS
TTCAACTAAAACTTATAAGG+TGG 0.581011 7:+47144192 MsG0780038460.01.T01:CDS
TCTTCTATTAAGCGGGACAT+GGG 0.584690 7:-47143944 None:intergenic
CCAGTTTCTATTCCCGGCAA+CGG 0.585580 7:-47144074 None:intergenic
TGTCTCGCTTGATCTGGCTA+CGG 0.592732 7:+47144446 MsG0780038460.01.T01:CDS
GGATGACAATTGCCATTAGG+AGG 0.599539 7:-47144310 None:intergenic
GTCCCGCTTAATAGAAGATG+CGG 0.600039 7:+47143949 MsG0780038460.01.T01:CDS
AGTACCAACTGTTGAGCCGT+CGG 0.607093 7:+47144509 MsG0780038460.01.T01:CDS
CAAGTCCTGGCCAGGCATGT+CGG 0.608929 7:-47143900 None:intergenic
TTTCCGCATCTTCTATTAAG+CGG 0.609640 7:-47143952 None:intergenic
GGTACTTCAACAAACCCCTC+AGG 0.611582 7:-47144492 None:intergenic
GGTCTAAGAATGAAGTGCTG+TGG 0.617456 7:+47144838 MsG0780038460.01.T01:CDS
GTAACCGACGGCTCAACAGT+TGG 0.627477 7:-47144513 None:intergenic
ATTGGATAGATAACAAAGTG+GGG 0.628962 7:+47144808 MsG0780038460.01.T01:CDS
TGAATTTGGTGCGTCGACCA+TGG 0.640628 7:-47144153 None:intergenic
CCTCCAGACATTATCACCCA+AGG 0.643293 7:-47144248 None:intergenic
ACCAGTTAGGGATAAGTGCG+AGG 0.655026 7:-47143877 None:intergenic
TCCATCAATACAGTAACCGA+CGG 0.656580 7:-47144525 None:intergenic
CAACATCAAAAGGAACAACA+GGG 0.657525 7:-47144285 None:intergenic
AACAGCTGCTGCCACCTGAG+GGG 0.663438 7:+47144478 MsG0780038460.01.T01:CDS
ACTTCAACAAACCCCTCAGG+TGG 0.663994 7:-47144489 None:intergenic
TGATTGGATAGATAACAAAG+TGG 0.664007 7:+47144806 MsG0780038460.01.T01:CDS
CCTTGGGTGATAATGTCTGG+AGG 0.680295 7:+47144248 MsG0780038460.01.T01:CDS
CTACTCTCAGAAACACACAA+TGG 0.693237 7:-47144720 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTCAACTAAAACTTATA+AGG + Chr7:47144189-47144208 MsG0780038460.01.T01:CDS 15.0%
! ATCATAACCAAATGTGAATT+TGG - Chr7:47144170-47144189 None:intergenic 25.0%
! TCTGAAAAACTATTCTTGTT+AGG + Chr7:47144130-47144149 MsG0780038460.01.T01:CDS 25.0%
! TTACTATCTAATGAGTGATA+AGG + Chr7:47143994-47144013 MsG0780038460.01.T01:CDS 25.0%
! TTATCACTCATTAGATAGTA+AGG - Chr7:47143995-47144014 None:intergenic 25.0%
! TTCAACTAAAACTTATAAGG+TGG + Chr7:47144192-47144211 MsG0780038460.01.T01:CDS 25.0%
!!! TTTTGTTTTATGGAAGATGA+TGG + Chr7:47144581-47144600 MsG0780038460.01.T01:CDS 25.0%
AACTAAAACTTATAAGGTGG+TGG + Chr7:47144195-47144214 MsG0780038460.01.T01:CDS 30.0%
AAGAACAACTGAGAATCATA+TGG - Chr7:47144696-47144715 None:intergenic 30.0%
AATGTGAAAATTCTCACCTT+GGG + Chr7:47144232-47144251 MsG0780038460.01.T01:CDS 30.0%
ATAGTAAGGATCATTGTCAA+TGG - Chr7:47143981-47144000 None:intergenic 30.0%
ATTGGATAGATAACAAAGTG+GGG + Chr7:47144808-47144827 MsG0780038460.01.T01:CDS 30.0%
CAAGCTTTCAACATATTCTT+CGG - Chr7:47144871-47144890 None:intergenic 30.0%
GATTGGATAGATAACAAAGT+GGG + Chr7:47144807-47144826 MsG0780038460.01.T01:CDS 30.0%
TACACACCTTTATTCACAAA+TGG - Chr7:47144334-47144353 None:intergenic 30.0%
TCCATAAAACAAAATAACCC+TGG - Chr7:47144575-47144594 None:intergenic 30.0%
TGAATACGACTGAATATCAA+TGG + Chr7:47144394-47144413 MsG0780038460.01.T01:intron 30.0%
TGATAAGGATTGTTGTAAGA+TGG + Chr7:47144009-47144028 MsG0780038460.01.T01:CDS 30.0%
TGATTGGATAGATAACAAAG+TGG + Chr7:47144806-47144825 MsG0780038460.01.T01:CDS 30.0%
TGTCATCCATTTGTGAATAA+AGG + Chr7:47144325-47144344 MsG0780038460.01.T01:CDS 30.0%
! AATTTGGAGTTCAAGATTCT+TGG + Chr7:47144604-47144623 MsG0780038460.01.T01:CDS 30.0%
!! GATTCTGAAAACTGATTTTG+AGG - Chr7:47144638-47144657 None:intergenic 30.0%
!! TTATGGAAGATGATGGAATT+TGG + Chr7:47144588-47144607 MsG0780038460.01.T01:CDS 30.0%
!! TTTTTCAGATAATGCATGAG+TGG - Chr7:47144119-47144138 None:intergenic 30.0%
!!! TCCAGGGTTATTTTGTTTTA+TGG + Chr7:47144571-47144590 MsG0780038460.01.T01:CDS 30.0%
AAACTATTCTTGTTAGGCCA+TGG + Chr7:47144136-47144155 MsG0780038460.01.T01:CDS 35.0%
AAGGATTGTTGTAAGATGGT+TGG + Chr7:47144013-47144032 MsG0780038460.01.T01:CDS 35.0%
AATGGATGACAATTGCCATT+AGG - Chr7:47144316-47144335 None:intergenic 35.0%
ACAACATCAAAAGGAACAAC+AGG - Chr7:47144289-47144308 None:intergenic 35.0%
AGCATGCAATTCTCTATGAT+TGG + Chr7:47144790-47144809 MsG0780038460.01.T01:CDS 35.0%
ATAACAAAGTGGGGAAAGTT+AGG + Chr7:47144817-47144836 MsG0780038460.01.T01:CDS 35.0%
ATGTGAGTGGTACTATTAAC+TGG + Chr7:47144353-47144372 MsG0780038460.01.T01:intron 35.0%
CAACATCAAAAGGAACAACA+GGG - Chr7:47144288-47144307 None:intergenic 35.0%
CAATGTGAAAATTCTCACCT+TGG + Chr7:47144231-47144250 MsG0780038460.01.T01:CDS 35.0%
CGAAGAATATGTTGAAAGCT+TGG + Chr7:47144869-47144888 MsG0780038460.01.T01:CDS 35.0%
GAGTAGGAACACACTAATAA+TGG + Chr7:47144737-47144756 MsG0780038460.01.T01:CDS 35.0%
TACTCTCAGAAACACACAAT+GGG - Chr7:47144722-47144741 None:intergenic 35.0%
TTTCCGCATCTTCTATTAAG+CGG - Chr7:47143955-47143974 None:intergenic 35.0%
! AAGATGGTTGGTTCATGTAA+TGG + Chr7:47144025-47144044 MsG0780038460.01.T01:CDS 35.0%
! AATAAAGGTGTGTATGTGAG+TGG + Chr7:47144340-47144359 MsG0780038460.01.T01:intron 35.0%
! AGAGAATTGCATGCTGATTA+TGG - Chr7:47144785-47144804 None:intergenic 35.0%
! TGTTTTTCTCACAGTTTCCA+GGG + Chr7:47144555-47144574 MsG0780038460.01.T01:CDS 35.0%
!! ATAGAAACTGGCTTCGTTTT+TGG + Chr7:47144086-47144105 MsG0780038460.01.T01:CDS 35.0%
AAGGAACAACAGGGAAACTT+TGG - Chr7:47144279-47144298 None:intergenic 40.0%
ATCTTCTATTAAGCGGGACA+TGG - Chr7:47143948-47143967 None:intergenic 40.0%
CTACTCTCAGAAACACACAA+TGG - Chr7:47144723-47144742 None:intergenic 40.0%
GAGTGGTACTATTAACTGGT+TGG + Chr7:47144357-47144376 MsG0780038460.01.T01:intron 40.0%
TCCATCAATACAGTAACCGA+CGG - Chr7:47144528-47144547 None:intergenic 40.0%
TCTTCTATTAAGCGGGACAT+GGG - Chr7:47143947-47143966 None:intergenic 40.0%
TTCCGCATCTTCTATTAAGC+GGG - Chr7:47143954-47143973 None:intergenic 40.0%
TTTGATGTTGTGCCTCCTAA+TGG + Chr7:47144298-47144317 MsG0780038460.01.T01:CDS 40.0%
! CATTGTGTGTTTCTGAGAGT+AGG + Chr7:47144721-47144740 MsG0780038460.01.T01:CDS 40.0%
! TGATTTCTGAAGACGCACTT+TGG - Chr7:47143843-47143862 None:intergenic 40.0%
! TTAGGAGGCACAACATCAAA+AGG - Chr7:47144298-47144317 None:intergenic 40.0%
!! AATGGCTTGATTTGCTTGCT+CGG + Chr7:47144043-47144062 MsG0780038460.01.T01:CDS 40.0%
!! CTGTTTTTCTCACAGTTTCC+AGG + Chr7:47144554-47144573 MsG0780038460.01.T01:CDS 40.0%
ACGAAGCCAGTTTCTATTCC+CGG - Chr7:47144083-47144102 None:intergenic 45.0%
ATTAAGCGGGACATGGGAAA+GGG - Chr7:47143941-47143960 None:intergenic 45.0%
CGACGCACCAAATTCACATT+TGG + Chr7:47144160-47144179 MsG0780038460.01.T01:CDS 45.0%
GGATGACAATTGCCATTAGG+AGG - Chr7:47144313-47144332 None:intergenic 45.0%
GTCCCGCTTAATAGAAGATG+CGG + Chr7:47143949-47143968 MsG0780038460.01.T01:CDS 45.0%
TATTAAGCGGGACATGGGAA+AGG - Chr7:47143942-47143961 None:intergenic 45.0%
TCAGATAATGCATGAGTGGC+CGG - Chr7:47144115-47144134 None:intergenic 45.0%
TGTGATTGTCTCGCTTGATC+TGG + Chr7:47144440-47144459 MsG0780038460.01.T01:CDS 45.0%
! TCACCTTGGGTGATAATGTC+TGG + Chr7:47144245-47144264 MsG0780038460.01.T01:CDS 45.0%
!! GGTCTAAGAATGAAGTGCTG+TGG + Chr7:47144838-47144857 MsG0780038460.01.T01:CDS 45.0%
ACCAGTTAGGGATAAGTGCG+AGG - Chr7:47143880-47143899 None:intergenic 50.0%
ACTTCAACAAACCCCTCAGG+TGG - Chr7:47144492-47144511 None:intergenic 50.0%
AGTACCAACTGTTGAGCCGT+CGG + Chr7:47144509-47144528 MsG0780038460.01.T01:CDS 50.0%
CAGATAATGCATGAGTGGCC+GGG - Chr7:47144114-47144133 None:intergenic 50.0%
CCAGTTTCTATTCCCGGCAA+CGG - Chr7:47144077-47144096 None:intergenic 50.0%
CCTCCAGACATTATCACCCA+AGG - Chr7:47144251-47144270 None:intergenic 50.0%
CTCGGTTATTCTTCCGTTGC+CGG + Chr7:47144061-47144080 MsG0780038460.01.T01:CDS 50.0%
GAAGGCGGGATCAGAGATTA+GGG - Chr7:47143819-47143838 None:intergenic 50.0%
GGTACTTCAACAAACCCCTC+AGG - Chr7:47144495-47144514 None:intergenic 50.0%
TCGGTTATTCTTCCGTTGCC+GGG + Chr7:47144062-47144081 MsG0780038460.01.T01:CDS 50.0%
TGTCTCGCTTGATCTGGCTA+CGG + Chr7:47144446-47144465 MsG0780038460.01.T01:CDS 50.0%
! CCTTGGGTGATAATGTCTGG+AGG + Chr7:47144248-47144267 MsG0780038460.01.T01:CDS 50.0%
! GCCGTCGGTTACTGTATTGA+TGG + Chr7:47144524-47144543 MsG0780038460.01.T01:CDS 50.0%
!! TGAATTTGGTGCGTCGACCA+TGG - Chr7:47144156-47144175 None:intergenic 50.0%
!!! CTGGCTTCGTTTTTGGAACC+CGG + Chr7:47144093-47144112 MsG0780038460.01.T01:CDS 50.0%
AAGACGCACTTTGGCGAAGG+CGG - Chr7:47143834-47143853 None:intergenic 55.0%
CAACGCTGCAACTCAAGTCC+TGG - Chr7:47143916-47143935 None:intergenic 55.0%
CAGGCATGTCGGACCAGTTA+GGG - Chr7:47143892-47143911 None:intergenic 55.0%
CCGTTGCCGGGAATAGAAAC+TGG + Chr7:47144074-47144093 MsG0780038460.01.T01:CDS 55.0%
CGAAGGCGGGATCAGAGATT+AGG - Chr7:47143820-47143839 None:intergenic 55.0%
CTGAAGACGCACTTTGGCGA+AGG - Chr7:47143837-47143856 None:intergenic 55.0%
GCCTCGCACTTATCCCTAAC+TGG + Chr7:47143876-47143895 MsG0780038460.01.T01:CDS 55.0%
GTAACCGACGGCTCAACAGT+TGG - Chr7:47144516-47144535 None:intergenic 55.0%
GTTAGGGATAAGTGCGAGGC+TGG - Chr7:47143876-47143895 None:intergenic 55.0%
AACAGCTGCTGCCACCTGAG+GGG + Chr7:47144478-47144497 MsG0780038460.01.T01:CDS 60.0%
AGACGCACTTTGGCGAAGGC+GGG - Chr7:47143833-47143852 None:intergenic 60.0%
CAACAGCTGCTGCCACCTGA+GGG + Chr7:47144477-47144496 MsG0780038460.01.T01:CDS 60.0%
CAAGTCCTGGCCAGGCATGT+CGG - Chr7:47143903-47143922 None:intergenic 60.0%
CCAGGCATGTCGGACCAGTT+AGG - Chr7:47143893-47143912 None:intergenic 60.0%
CCTAACTGGTCCGACATGCC+TGG + Chr7:47143890-47143909 MsG0780038460.01.T01:CDS 60.0%
CTGCAACTCAAGTCCTGGCC+AGG - Chr7:47143911-47143930 None:intergenic 60.0%
TCAACAGCTGCTGCCACCTG+AGG + Chr7:47144476-47144495 MsG0780038460.01.T01:CDS 60.0%
CTGGTCCGACATGCCTGGCC+AGG + Chr7:47143895-47143914 MsG0780038460.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 47143794 47144908 47143794 ID=MsG0780038460.01;Name=MsG0780038460.01
Chr7 mRNA 47143794 47144908 47143794 ID=MsG0780038460.01.T01;Parent=MsG0780038460.01;Name=MsG0780038460.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|1|1|2|0|343
Chr7 exon 47143794 47144346 47143794 ID=MsG0780038460.01.T01:exon:5954;Parent=MsG0780038460.01.T01
Chr7 exon 47144430 47144908 47144430 ID=MsG0780038460.01.T01:exon:5955;Parent=MsG0780038460.01.T01
Chr7 CDS 47143794 47144346 47143794 ID=MsG0780038460.01.T01:cds;Parent=MsG0780038460.01.T01
Chr7 CDS 47144430 47144908 47144430 ID=MsG0780038460.01.T01:cds;Parent=MsG0780038460.01.T01
Gene Sequence

>MsG0780038460.01.T01

ATGTGTTGCAAATCATTGAAAACCCTAATCTCTGATCCCGCCTTCGCCAAAGTGCGTCTTCAGAAATCATTATGTGACGCCAGCCTCGCACTTATCCCTAACTGGTCCGACATGCCTGGCCAGGACTTGAGTTGCAGCGTTGTACCCTTTCCCATGTCCCGCTTAATAGAAGATGCGGAAATCACCATTGACAATGATCCTTACTATCTAATGAGTGATAAGGATTGTTGTAAGATGGTTGGTTCATGTAATGGCTTGATTTGCTTGCTCGGTTATTCTTCCGTTGCCGGGAATAGAAACTGGCTTCGTTTTTGGAACCCGGCCACTCATGCATTATCTGAAAAACTATTCTTGTTAGGCCATGGTCGACGCACCAAATTCACATTTGGTTATGATATTTCAACTAAAACTTATAAGGTGGTGGCTTACTCTGCATACAATGTGAAAATTCTCACCTTGGGTGATAATGTCTGGAGGAATATCCAAAGTTTCCCTGTTGTTCCTTTTGATGTTGTGCCTCCTAATGGCAATTGTCATCCATTTGTGAATAAAGTTGAGCAATTTGTGATTGTCTCGCTTGATCTGGCTACGGAGACATATCAACAGCTGCTGCCACCTGAGGGGTTTGTTGAAGTACCAACTGTTGAGCCGTCGGTTACTGTATTGATGGACTGTCTCTGTTTTTCTCACAGTTTCCAGGGTTATTTTGTTTTATGGAAGATGATGGAATTTGGAGTTCAAGATTCTTGGACTCAATTCCTCAAAATCAGTTTTCAGAATCTTCAAATTGATGATTATGATTTTTATGATTTTCTACCATATGATTCTCAGTTGTTCTTGTTCCCATTGTGTGTTTCTGAGAGTAGGAACACACTAATAATGGCAAGCAATCAAGAAAGCGATTACCATAATCAGCATGCAATTCTCTATGATTGGATAGATAACAAAGTGGGGAAAGTTAGGTCTAAGAATGAAGTGCTGTGGTTTTTTGCCGAAGAATATGTTGAAAGCTTGGCTTCAACAACCTTTTGA
Protein sequence

>MsG0780038460.01.T01

MCCKSLKTLISDPAFAKVRLQKSLCDASLALIPNWSDMPGQDLSCSVVPFPMSRLIEDAEITIDNDPYYLMSDKDCCKMVGSCNGLICLLGYSSVAGNRNWLRFWNPATHALSEKLFLLGHGRRTKFTFGYDISTKTYKVVAYSAYNVKILTLGDNVWRNIQSFPVVPFDVVPPNGNCHPFVNKVEQFVIVSLDLATETYQQLLPPEGFVEVPTVEPSVTVLMDCLCFSHSFQGYFVLWKMMEFGVQDSWTQFLKISFQNLQIDDYDFYDFLPYDSQLFLFPLCVSESRNTLIMASNQESDYHNQHAILYDWIDNKVGKVRSKNEVLWFFAEEYVESLASTTF*