AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039154.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039154.01.T01 MTR_7g066850 82.258 372 61 3 1 371 41 408 0.0 615
MsG0780039154.01.T01 MTR_7g066840 65.867 375 110 7 1 371 41 401 7.60e-160 454
MsG0780039154.01.T01 MTR_2g043410 42.677 396 183 16 1 369 40 418 4.81e-84 261
MsG0780039154.01.T01 MTR_4g129190 39.948 388 190 12 1 367 24 389 1.27e-81 254
MsG0780039154.01.T01 MTR_5g069760 41.270 378 179 11 1 367 24 369 7.35e-81 252
MsG0780039154.01.T01 MTR_5g069930 38.947 380 190 11 1 366 24 375 5.51e-78 244
MsG0780039154.01.T01 MTR_7g057270 39.332 389 195 10 1 367 44 413 5.78e-78 246
MsG0780039154.01.T01 MTR_7g091630 40.806 397 189 14 1 367 50 430 2.14e-77 245
MsG0780039154.01.T01 MTR_7g055870 40.920 413 181 16 2 369 32 426 3.84e-76 241
MsG0780039154.01.T01 MTR_8g066440 40.204 393 177 14 1 367 41 401 3.54e-75 238
MsG0780039154.01.T01 MTR_1g442850 39.583 384 184 11 1 367 23 375 5.15e-75 237
MsG0780039154.01.T01 MTR_7g056290 38.557 402 193 17 1 368 40 421 1.52e-74 237
MsG0780039154.01.T01 MTR_7g056003 40.152 396 191 16 1 369 33 409 1.58e-74 237
MsG0780039154.01.T01 MTR_7g055930 40.194 413 184 16 2 369 32 426 7.36e-74 236
MsG0780039154.01.T01 MTR_2g043400 39.098 399 193 16 1 369 41 419 2.95e-73 234
MsG0780039154.01.T01 MTR_4g013175 38.537 410 193 15 2 366 29 424 3.65e-73 234
MsG0780039154.01.T01 MTR_7g056390 37.406 401 197 18 1 367 36 416 3.75e-73 233
MsG0780039154.01.T01 MTR_7g056710 40.212 378 180 14 1 366 36 379 8.42e-73 231
MsG0780039154.01.T01 MTR_7g056717 41.161 379 178 13 1 367 40 385 4.50e-72 230
MsG0780039154.01.T01 MTR_6g055210 41.000 400 191 15 1 371 40 423 6.66e-72 231
MsG0780039154.01.T01 MTR_0128s0020 40.263 380 190 11 1 366 36 392 4.09e-71 228
MsG0780039154.01.T01 MTR_7g060940 40.155 386 178 17 1 366 40 392 7.78e-71 227
MsG0780039154.01.T01 MTR_3g072470 37.783 397 203 16 1 368 37 418 7.82e-71 228
MsG0780039154.01.T01 MTR_5g043160 39.756 410 186 16 1 368 68 458 1.36e-70 228
MsG0780039154.01.T01 MTR_4g013185 39.078 412 192 17 1 367 28 425 1.50e-70 227
MsG0780039154.01.T01 MTR_0649s0020 39.276 387 187 14 2 368 30 388 2.63e-70 225
MsG0780039154.01.T01 MTR_7g056503 40.921 391 177 14 1 368 39 398 2.91e-70 225
MsG0780039154.01.T01 MTR_5g068040 40.933 386 168 16 1 366 34 379 8.20e-70 224
MsG0780039154.01.T01 MTR_2g010950 37.922 385 203 13 1 367 38 404 3.41e-69 223
MsG0780039154.01.T01 MTR_3g464500 38.442 385 196 14 1 369 45 404 8.83e-69 222
MsG0780039154.01.T01 MTR_3g464470 38.482 382 197 13 1 369 25 381 1.02e-68 221
MsG0780039154.01.T01 MTR_7g445890 40.722 388 174 15 1 369 34 384 2.40e-68 220
MsG0780039154.01.T01 MTR_7g052150 38.421 380 199 16 1 366 40 398 5.07e-67 217
MsG0780039154.01.T01 MTR_0128s0010 39.386 391 185 14 1 369 39 399 7.69e-67 216
MsG0780039154.01.T01 MTR_5g096710 37.532 389 194 11 1 369 41 400 1.42e-66 216
MsG0780039154.01.T01 MTR_2g047892 38.220 382 198 14 1 368 40 397 1.44e-66 216
MsG0780039154.01.T01 MTR_7g056737 39.946 368 176 14 1 356 40 374 1.51e-66 216
MsG0780039154.01.T01 MTR_7g078900 37.713 411 194 17 1 367 30 422 2.17e-66 216
MsG0780039154.01.T01 MTR_3g080370 39.206 403 193 11 1 371 39 421 2.45e-66 217
MsG0780039154.01.T01 MTR_2g010920 35.840 399 212 13 1 367 38 424 3.46e-66 216
MsG0780039154.01.T01 MTR_7g056760 37.949 390 195 16 1 368 41 405 4.04e-66 215
MsG0780039154.01.T01 MTR_1g071010 38.601 386 190 13 1 369 33 388 1.20e-65 213
MsG0780039154.01.T01 MTR_7g062100 37.302 378 203 11 1 367 42 396 2.39e-65 213
MsG0780039154.01.T01 MTR_1g088120 39.163 406 185 17 1 367 28 410 2.72e-65 213
MsG0780039154.01.T01 MTR_0128s0070 37.302 378 203 10 1 366 40 395 3.26e-65 212
MsG0780039154.01.T01 MTR_7g055987 42.424 330 150 13 1 322 38 335 4.71e-65 211
MsG0780039154.01.T01 MTR_5g056020 39.558 407 183 16 3 368 37 421 9.99e-65 214
MsG0780039154.01.T01 MTR_7g050480 38.259 379 191 15 1 366 40 388 1.68e-64 210
MsG0780039154.01.T01 MTR_7g055977 41.193 352 181 12 4 347 28 361 2.49e-64 209
MsG0780039154.01.T01 MTR_4g034860 36.915 363 185 9 10 347 49 392 2.81e-64 210
MsG0780039154.01.T01 MTR_7g050520 38.522 379 190 16 1 366 40 388 3.44e-64 209
MsG0780039154.01.T01 MTR_7g091640 43.042 309 146 13 1 292 53 348 3.72e-64 209
MsG0780039154.01.T01 MTR_7g052670 37.530 413 189 12 1 369 39 426 6.52e-64 210
MsG0780039154.01.T01 MTR_4g033495 38.346 399 183 18 1 371 45 408 7.46e-64 210
MsG0780039154.01.T01 MTR_7g078040 35.322 419 206 11 1 367 27 432 1.65e-63 209
MsG0780039154.01.T01 MTR_4g030830 38.046 389 199 16 1 368 27 394 1.69e-63 208
MsG0780039154.01.T01 MTR_6g016285 38.557 402 195 15 2 371 40 421 1.89e-63 209
MsG0780039154.01.T01 MTR_4g030980 36.451 417 195 18 1 368 33 428 1.98e-63 209
MsG0780039154.01.T01 MTR_0097s0030 37.984 387 191 13 1 368 32 388 3.18e-63 207
MsG0780039154.01.T01 MTR_2g047240 37.984 387 191 13 1 368 32 388 3.18e-63 207
MsG0780039154.01.T01 MTR_4g013180 39.084 371 174 14 1 347 29 371 4.08e-63 209
MsG0780039154.01.T01 MTR_2g010900 37.255 357 182 13 1 335 1 337 8.86e-63 206
MsG0780039154.01.T01 MTR_7g056570 38.802 384 189 14 1 371 36 386 1.21e-62 207
MsG0780039154.01.T01 MTR_0707s0020 37.123 431 182 16 2 371 45 447 3.61e-62 206
MsG0780039154.01.T01 MTR_4g030090 37.337 383 211 12 1 368 32 400 7.07e-62 204
MsG0780039154.01.T01 MTR_7g028660 38.677 393 172 16 1 367 29 378 7.31e-62 203
MsG0780039154.01.T01 MTR_7g056797 37.371 388 198 13 1 368 41 403 9.45e-62 204
MsG0780039154.01.T01 MTR_0464s0020 37.838 407 198 19 1 369 41 430 9.94e-62 204
MsG0780039154.01.T01 MTR_2g047200 37.371 388 190 17 2 368 39 394 1.27e-61 203
MsG0780039154.01.T01 MTR_7g070830 36.496 411 188 16 1 367 39 420 1.36e-61 204
MsG0780039154.01.T01 MTR_4g019990 37.817 394 193 19 1 369 24 390 2.64e-61 202
MsG0780039154.01.T01 MTR_6g017280 37.789 389 196 14 1 369 27 389 2.74e-61 202
MsG0780039154.01.T01 MTR_7g056200 37.726 387 179 14 1 369 41 383 2.84e-61 202
MsG0780039154.01.T01 MTR_7g062060 38.404 401 182 17 1 367 30 399 5.89e-61 201
MsG0780039154.01.T01 MTR_7g070880 36.275 408 193 15 1 367 39 420 9.82e-61 201
MsG0780039154.01.T01 MTR_3g437520 37.438 406 197 20 1 370 41 425 1.02e-60 202
MsG0780039154.01.T01 MTR_7g061090 37.150 393 194 16 1 367 40 405 1.30e-60 201
MsG0780039154.01.T01 MTR_7g061010 39.947 378 184 17 1 366 40 386 1.62e-60 200
MsG0780039154.01.T01 MTR_4g008790 37.284 405 184 15 2 364 58 434 1.68e-60 202
MsG0780039154.01.T01 MTR_7g022600 36.500 400 204 16 1 368 41 422 1.96e-60 201
MsG0780039154.01.T01 MTR_7g061060 38.292 363 182 12 1 347 31 367 1.99e-60 200
MsG0780039154.01.T01 MTR_4g031020 35.266 414 204 18 1 368 33 428 2.45e-60 201
MsG0780039154.01.T01 MTR_7g078860 38.070 373 183 14 1 347 27 377 3.95e-60 199
MsG0780039154.01.T01 MTR_7g055830 43.082 318 144 12 80 371 54 360 4.02e-60 198
MsG0780039154.01.T01 MTR_7g056260 43.289 298 145 11 1 287 32 316 4.10e-60 197
MsG0780039154.01.T01 MTR_0242s0060 36.585 369 202 11 1 346 27 386 6.04e-60 199
MsG0780039154.01.T01 MTR_0242s0040 36.585 369 202 11 1 346 27 386 6.04e-60 199
MsG0780039154.01.T01 MTR_7g061050 37.337 383 194 12 1 367 31 383 1.34e-59 197
MsG0780039154.01.T01 MTR_6g065510 43.463 283 131 12 95 367 67 330 2.64e-59 195
MsG0780039154.01.T01 MTR_7g066100 36.386 404 181 17 1 367 29 393 6.27e-59 196
MsG0780039154.01.T01 MTR_4g024890 38.947 380 196 15 1 367 28 384 6.58e-59 196
MsG0780039154.01.T01 MTR_7g056170 35.084 419 172 10 1 369 93 461 1.20e-58 197
MsG0780039154.01.T01 MTR_7g078840 37.532 389 191 16 1 350 28 403 6.45e-58 194
MsG0780039154.01.T01 MTR_7g066830 55.090 167 72 2 4 168 16 181 6.47e-58 187
MsG0780039154.01.T01 MTR_2g047878 38.303 389 156 17 1 368 39 364 1.22e-57 192
MsG0780039154.01.T01 MTR_7g060960 38.235 374 166 16 1 366 50 366 1.28e-57 192
MsG0780039154.01.T01 MTR_4g011660 36.957 414 185 17 1 369 37 419 2.24e-57 192
MsG0780039154.01.T01 MTR_7g079160 35.714 406 184 19 1 353 26 407 2.45e-57 194
MsG0780039154.01.T01 MTR_7g066030 35.354 396 197 14 1 368 39 403 3.61e-57 191
MsG0780039154.01.T01 MTR_7g009265 41.337 329 165 9 57 367 5 323 5.62e-57 189
MsG0780039154.01.T01 MTR_1g029650 35.354 396 203 15 3 366 28 402 7.14e-57 191
MsG0780039154.01.T01 MTR_6g086920 36.111 432 193 18 2 368 57 470 2.32e-56 192
MsG0780039154.01.T01 MTR_7g077990 37.430 358 187 15 1 346 35 367 6.63e-56 188
MsG0780039154.01.T01 MTR_7g035295 34.577 402 180 13 1 371 34 383 7.14e-56 188
MsG0780039154.01.T01 MTR_7g077070 35.366 410 208 17 1 367 34 429 7.24e-56 189
MsG0780039154.01.T01 MTR_7g066000 35.219 389 199 14 1 366 43 401 3.58e-55 186
MsG0780039154.01.T01 MTR_6g092560 37.310 394 192 16 2 368 31 396 4.40e-55 187
MsG0780039154.01.T01 MTR_6g017305 41.993 281 144 7 99 369 12 283 2.10e-54 181
MsG0780039154.01.T01 MTR_2g437110 35.149 404 178 14 1 369 40 394 1.01e-53 185
MsG0780039154.01.T01 MTR_6g017295 41.325 317 140 11 65 347 24 328 3.37e-53 184
MsG0780039154.01.T01 MTR_7g055953 42.972 249 112 9 126 367 89 314 1.11e-52 177
MsG0780039154.01.T01 MTR_3g013470 34.805 385 192 15 2 362 14 363 5.55e-52 177
MsG0780039154.01.T01 MTR_7g077970 32.512 406 226 14 1 367 25 421 1.13e-51 177
MsG0780039154.01.T01 MTR_7g056820 35.635 362 188 14 1 347 25 356 1.41e-51 176
MsG0780039154.01.T01 MTR_7g022670 33.784 370 184 10 1 368 41 351 1.68e-51 175
MsG0780039154.01.T01 MTR_7g113500 36.455 299 166 8 82 367 94 381 2.36e-51 176
MsG0780039154.01.T01 MTR_7g056173 43.651 252 125 7 126 369 26 268 3.32e-51 174
MsG0780039154.01.T01 MTR_4g030110 36.957 368 172 17 1 347 48 376 6.00e-51 175
MsG0780039154.01.T01 MTR_4g129160 36.517 356 174 15 1 325 26 360 1.02e-50 174
MsG0780039154.01.T01 MTR_2g006360 37.135 377 147 17 1 366 64 361 1.47e-50 173
MsG0780039154.01.T01 MTR_2g461450 36.944 360 178 13 1 350 36 356 7.30e-50 171
MsG0780039154.01.T01 MTR_1g112010 36.096 374 181 13 5 369 2 326 4.96e-49 168
MsG0780039154.01.T01 MTR_7g034310 44.215 242 105 8 126 367 16 227 2.09e-48 163
MsG0780039154.01.T01 MTR_7g077910 39.296 341 155 18 59 367 15 335 4.82e-48 166
MsG0780039154.01.T01 MTR_8g101940 37.662 385 189 16 1 369 20 369 8.77e-48 166
MsG0780039154.01.T01 MTR_7g066010 33.418 395 169 15 3 368 41 370 5.15e-47 164
MsG0780039154.01.T01 MTR_7g066060 35.369 393 201 16 3 369 43 408 8.46e-47 167
MsG0780039154.01.T01 MTR_5g058620 39.437 284 138 11 107 368 11 282 1.32e-46 160
MsG0780039154.01.T01 MTR_1g058870 39.437 284 138 11 107 368 11 282 1.32e-46 160
MsG0780039154.01.T01 MTR_4g030760 34.383 381 197 15 1 368 91 431 3.38e-46 163
MsG0780039154.01.T01 MTR_1g015730 33.575 414 180 19 1 366 27 393 4.11e-46 162
MsG0780039154.01.T01 MTR_2g047895 38.462 299 132 14 68 346 23 289 9.03e-46 160
MsG0780039154.01.T01 MTR_6g088385 38.255 298 138 12 96 371 49 322 7.00e-45 157
MsG0780039154.01.T01 MTR_4g037465 32.199 382 215 15 1 366 39 392 1.81e-44 158
MsG0780039154.01.T01 MTR_7g037670 43.277 238 100 10 1 230 41 251 4.44e-42 150
MsG0780039154.01.T01 MTR_7g066080 34.140 413 198 20 1 369 34 416 7.24e-42 152
MsG0780039154.01.T01 MTR_1g015740 31.771 384 160 13 1 366 26 325 1.04e-41 149
MsG0780039154.01.T01 MTR_7g061940 43.111 225 106 8 114 338 64 266 1.19e-41 147
MsG0780039154.01.T01 MTR_7g445750 35.987 314 141 12 1 277 41 331 1.83e-40 145
MsG0780039154.01.T01 MTR_0267s0050 29.974 387 220 15 2 366 25 382 3.56e-40 146
MsG0780039154.01.T01 MTR_7g078960 36.452 310 142 12 89 367 1 286 9.55e-40 142
MsG0780039154.01.T01 MTR_6g017270 32.011 378 186 14 1 369 27 342 3.33e-39 142
MsG0780039154.01.T01 MTR_4g030790 34.754 305 131 11 1 291 37 287 5.40e-38 139
MsG0780039154.01.T01 MTR_7g070440 30.203 394 199 14 1 366 25 370 8.53e-38 139
MsG0780039154.01.T01 MTR_3g013950 28.792 389 224 15 2 366 25 384 3.61e-37 138
MsG0780039154.01.T01 MTR_5g011350 42.640 197 85 7 75 257 57 239 2.74e-36 132
MsG0780039154.01.T01 MTR_7g056023 40.789 228 115 10 53 269 59 277 5.22e-36 132
MsG0780039154.01.T01 MTR_7g091610 37.443 219 115 8 155 367 44 246 5.72e-36 131
MsG0780039154.01.T01 MTR_2g021150 31.481 378 207 16 1 367 32 368 1.08e-35 134
MsG0780039154.01.T01 MTR_5g069950 39.109 202 91 6 101 298 34 207 1.23e-35 130
MsG0780039154.01.T01 MTR_2g010935 34.167 240 121 5 132 367 43 249 1.26e-34 128
MsG0780039154.01.T01 MTR_2g060555 36.594 276 116 12 101 359 46 279 3.72e-34 127
MsG0780039154.01.T01 MTR_7g078940 35.034 294 142 14 1 249 50 339 1.79e-33 129
MsG0780039154.01.T01 MTR_1g097560 27.701 361 184 14 1 345 54 353 1.47e-32 125
MsG0780039154.01.T01 MTR_8g101580 28.421 380 210 15 1 367 64 394 1.06e-31 124
MsG0780039154.01.T01 MTR_2g017720 38.189 254 126 13 115 363 69 296 1.11e-31 124
MsG0780039154.01.T01 MTR_3g007360 30.278 360 186 13 1 342 70 382 1.42e-31 123
MsG0780039154.01.T01 MTR_1g094210 31.034 377 197 20 1 367 75 398 1.75e-31 123
MsG0780039154.01.T01 MTR_6g081280 33.200 250 133 6 126 367 17 240 3.87e-31 119
MsG0780039154.01.T01 MTR_4g006350 30.933 375 218 16 10 366 522 873 5.38e-31 125
MsG0780039154.01.T01 MTR_4g128320 35.606 264 122 10 99 353 40 264 1.03e-30 118
MsG0780039154.01.T01 MTR_1g094210 30.946 349 183 18 1 341 75 373 1.54e-30 120
MsG0780039154.01.T01 MTR_3g007410 31.475 305 160 11 1 289 70 341 1.73e-30 120
MsG0780039154.01.T01 MTR_1g050542 29.211 380 205 17 1 367 76 404 3.69e-30 119
MsG0780039154.01.T01 MTR_1g097330 27.720 386 214 15 1 371 34 369 4.91e-30 119
MsG0780039154.01.T01 MTR_3g014570 29.348 368 184 17 1 345 47 361 8.16e-30 118
MsG0780039154.01.T01 MTR_5g022420 28.070 342 197 15 1 338 45 341 9.21e-30 118
MsG0780039154.01.T01 MTR_7g030040 34.247 292 108 8 82 368 125 337 1.80e-29 116
MsG0780039154.01.T01 MTR_7g056793 32.794 247 97 6 126 366 47 230 4.36e-29 112
MsG0780039154.01.T01 MTR_3g014540 30.449 312 152 14 1 288 47 317 1.29e-28 115
MsG0780039154.01.T01 MTR_2g021190 27.949 390 202 17 1 367 39 372 1.44e-28 114
MsG0780039154.01.T01 MTR_3g013770 30.195 308 158 12 1 286 51 323 3.47e-28 114
MsG0780039154.01.T01 MTR_2g021252 28.682 387 189 19 1 367 65 384 3.47e-28 114
MsG0780039154.01.T01 MTR_4g020000 33.803 284 132 11 108 367 92 343 4.16e-28 113
MsG0780039154.01.T01 MTR_3g007270 29.126 309 170 12 1 288 65 345 6.89e-28 113
MsG0780039154.01.T01 MTR_7g058630 41.139 158 81 5 212 369 36 181 9.04e-28 108
MsG0780039154.01.T01 MTR_7g061100 34.498 229 112 6 1 228 31 222 1.80e-27 110
MsG0780039154.01.T01 MTR_2g047832 27.649 387 224 15 1 368 47 396 1.94e-27 112
MsG0780039154.01.T01 MTR_3g007330 30.519 308 150 15 1 288 66 329 3.77e-27 111
MsG0780039154.01.T01 MTR_1g047490 30.492 305 139 11 1 279 40 297 4.53e-27 109
MsG0780039154.01.T01 MTR_1g097490 26.722 363 188 14 1 345 67 369 4.82e-27 110
MsG0780039154.01.T01 MTR_8g030630 39.594 197 80 7 150 345 282 440 5.23e-27 111
MsG0780039154.01.T01 MTR_8g030630 37.368 190 90 8 165 347 72 239 5.96e-25 105
MsG0780039154.01.T01 MTR_2g046900 27.731 357 209 16 1 345 46 365 5.36e-27 110
MsG0780039154.01.T01 MTR_8g467140 29.167 312 167 14 1 294 50 325 7.79e-27 109
MsG0780039154.01.T01 MTR_0044s0300 27.907 387 206 19 1 367 56 389 1.54e-26 109
MsG0780039154.01.T01 MTR_2g029990 27.013 385 212 16 1 367 69 402 1.64e-26 109
MsG0780039154.01.T01 MTR_2g046920 28.011 357 200 16 1 345 42 353 1.89e-26 108
MsG0780039154.01.T01 MTR_7g050490 39.157 166 95 3 1 163 26 188 2.84e-26 104
MsG0780039154.01.T01 MTR_4g107820 27.213 305 172 11 1 291 54 322 3.46e-26 108
MsG0780039154.01.T01 MTR_4g107780 27.213 305 172 11 1 291 54 322 3.46e-26 108
MsG0780039154.01.T01 MTR_3g083640 27.632 380 212 17 1 367 73 402 4.34e-26 108
MsG0780039154.01.T01 MTR_4g107820 27.213 305 172 11 1 291 54 322 5.61e-26 108
MsG0780039154.01.T01 MTR_4g107780 27.213 305 172 11 1 291 54 322 6.01e-26 108
MsG0780039154.01.T01 MTR_3g009310 29.191 346 185 17 1 321 60 370 9.97e-26 107
MsG0780039154.01.T01 MTR_3g011020 27.964 329 155 12 1 301 46 320 1.36e-25 106
MsG0780039154.01.T01 MTR_7g407070 27.097 310 184 11 1 288 50 339 1.39e-25 107
MsG0780039154.01.T01 MTR_3g436150 29.206 315 165 15 1 288 50 333 1.50e-25 106
MsG0780039154.01.T01 MTR_6g065980 29.293 297 159 13 1 288 34 288 3.27e-25 105
MsG0780039154.01.T01 MTR_5g011200 29.373 303 165 13 1 286 35 305 5.09e-25 105
MsG0780039154.01.T01 MTR_5g057790 29.592 294 172 10 1 286 64 330 5.18e-25 105
MsG0780039154.01.T01 MTR_3g011100 30.619 307 162 13 1 288 253 527 5.97e-25 106
MsG0780039154.01.T01 MTR_6g027910 29.154 319 162 14 1 288 27 312 6.17e-25 104
MsG0780039154.01.T01 MTR_2g027820 41.489 188 90 8 184 366 127 299 7.72e-25 103
MsG0780039154.01.T01 MTR_4g055060 29.450 309 164 14 1 288 48 323 8.03e-25 104
MsG0780039154.01.T01 MTR_7g007300 28.684 380 203 20 1 367 121 445 1.19e-24 104
MsG0780039154.01.T01 MTR_6g004660 27.387 398 207 16 1 367 34 380 2.05e-24 103
MsG0780039154.01.T01 MTR_3g036290 30.272 294 161 13 1 288 40 295 2.08e-24 103
MsG0780039154.01.T01 MTR_4g024870 34.836 244 134 9 1 227 62 297 2.15e-24 103
MsG0780039154.01.T01 MTR_3g010520 26.667 375 209 16 1 367 43 359 5.39e-24 102
MsG0780039154.01.T01 MTR_3g013740 29.206 315 164 14 1 288 62 344 8.61e-24 102
MsG0780039154.01.T01 MTR_5g057710 30.169 295 169 12 1 286 64 330 9.17e-24 101
MsG0780039154.01.T01 MTR_6g042600 36.464 181 89 7 193 363 156 320 1.04e-23 101
MsG0780039154.01.T01 MTR_6g007135 25.954 393 218 17 1 367 44 389 1.10e-23 101
MsG0780039154.01.T01 MTR_3g011060 27.322 366 189 16 1 338 46 362 1.13e-23 101
MsG0780039154.01.T01 MTR_3g030250 24.607 382 214 17 2 367 56 379 1.16e-23 101
MsG0780039154.01.T01 MTR_1g054725 27.273 396 201 22 1 367 38 375 1.28e-23 101
MsG0780039154.01.T01 MTR_2g046830 27.273 352 209 13 1 345 43 354 1.50e-23 101
MsG0780039154.01.T01 MTR_5g046300 27.532 316 181 14 1 301 22 304 3.20e-23 99.8
MsG0780039154.01.T01 MTR_5g046290 27.532 316 181 14 1 301 22 304 3.20e-23 99.8
MsG0780039154.01.T01 MTR_1g054575 28.289 304 168 14 1 291 70 336 3.74e-23 101
MsG0780039154.01.T01 MTR_3g030350 29.085 306 169 12 1 293 53 323 3.81e-23 100
MsG0780039154.01.T01 MTR_2g055970 28.339 307 170 15 1 291 229 501 4.45e-23 100
MsG0780039154.01.T01 MTR_3g010590 26.913 379 215 20 1 367 57 385 4.48e-23 99.8
MsG0780039154.01.T01 MTR_3g036335 27.415 383 215 16 1 367 59 394 5.37e-23 99.8
MsG0780039154.01.T01 MTR_4g006840 32.353 238 110 7 1 224 17 217 6.13e-23 96.3
MsG0780039154.01.T01 MTR_3g007430 29.276 304 161 13 1 286 61 328 6.25e-23 99.4
MsG0780039154.01.T01 MTR_7g013590 26.263 396 212 17 1 370 54 395 7.62e-23 99.4
MsG0780039154.01.T01 MTR_3g009240 28.431 306 160 13 1 288 54 318 9.01e-23 99.0
MsG0780039154.01.T01 MTR_3g006570 25.193 389 226 13 1 371 39 380 9.52e-23 98.6
MsG0780039154.01.T01 MTR_2g021155 28.291 357 188 15 1 340 54 359 1.12e-22 100
MsG0780039154.01.T01 MTR_2g021155 26.690 281 153 12 104 367 711 955 3.94e-15 77.4
MsG0780039154.01.T01 MTR_1g115160 27.105 380 211 17 1 367 40 366 1.56e-22 97.8
MsG0780039154.01.T01 MTR_3g006670 28.086 324 179 13 1 305 67 355 1.99e-22 98.2
MsG0780039154.01.T01 MTR_3g030330 27.822 381 214 19 1 367 38 371 2.01e-22 97.8
MsG0780039154.01.T01 MTR_2g046800 26.543 324 180 11 1 290 32 331 2.84e-22 97.4
MsG0780039154.01.T01 MTR_0760s0010 25.654 382 212 16 1 367 65 389 3.68e-22 97.1
MsG0780039154.01.T01 MTR_7g066040 36.000 175 83 7 81 228 24 196 3.85e-22 94.4
MsG0780039154.01.T01 MTR_2g078900 28.669 293 176 12 1 288 51 315 4.27e-22 96.7
MsG0780039154.01.T01 MTR_3g007300 29.054 296 144 12 1 288 67 304 7.51e-22 95.9
MsG0780039154.01.T01 MTR_4g061340 29.260 311 160 13 1 288 44 317 9.45e-22 95.9
MsG0780039154.01.T01 MTR_7g078880 33.816 207 96 8 149 347 106 279 1.48e-21 95.5
MsG0780039154.01.T01 MTR_7g021580 33.846 195 103 6 1 195 51 219 1.66e-21 94.0
MsG0780039154.01.T01 MTR_7g021580 42.373 118 51 6 253 367 197 300 1.05e-13 71.6
MsG0780039154.01.T01 MTR_3g010390 29.524 315 165 13 1 287 51 336 2.08e-21 95.1
MsG0780039154.01.T01 MTR_7g006360 34.118 170 64 3 1 167 27 151 2.25e-21 93.6
MsG0780039154.01.T01 MTR_7g006360 32.719 217 96 8 185 367 75 275 1.20e-19 88.6
MsG0780039154.01.T01 MTR_3g024040 25.197 381 214 16 1 367 49 372 2.98e-21 94.4
MsG0780039154.01.T01 MTR_1g055375 24.808 391 224 15 1 367 22 366 7.13e-21 93.2
MsG0780039154.01.T01 MTR_3g023930 27.105 380 200 19 1 367 52 367 1.04e-20 92.8
MsG0780039154.01.T01 MTR_3g055000 35.762 151 72 4 217 367 1 126 1.11e-20 87.0
MsG0780039154.01.T01 MTR_5g057690 28.231 294 166 11 1 286 64 320 1.44e-20 92.4
MsG0780039154.01.T01 MTR_3g010970 26.509 381 211 17 1 367 66 391 2.04e-20 92.0
MsG0780039154.01.T01 MTR_4g024910 43.709 151 67 7 1 143 1 141 2.95e-20 90.9
MsG0780039154.01.T01 MTR_4g024910 36.434 129 61 4 244 366 151 264 1.34e-11 65.5
MsG0780039154.01.T01 MTR_3g024150 25.195 385 218 16 1 367 53 385 3.16e-20 91.7
MsG0780039154.01.T01 MTR_1g058190 28.197 305 151 12 1 288 53 306 3.30e-20 91.3
MsG0780039154.01.T01 MTR_2g046860 28.364 275 151 13 82 345 7 246 3.45e-20 90.5
MsG0780039154.01.T01 MTR_6g069350 40.426 141 66 4 10 150 31 153 3.94e-20 86.7
MsG0780039154.01.T01 MTR_3g010870 27.063 303 172 14 1 290 55 321 4.21e-20 91.3
MsG0780039154.01.T01 MTR_4g133170 24.277 346 188 15 1 325 22 314 5.89e-20 90.9
MsG0780039154.01.T01 MTR_7g070900 36.111 180 64 6 126 292 236 377 6.43e-20 91.3
MsG0780039154.01.T01 MTR_6g021880 27.202 386 220 19 1 367 38 381 8.23e-20 90.1
MsG0780039154.01.T01 MTR_4g108820 25.166 302 147 11 1 291 60 293 8.55e-20 89.4
MsG0780039154.01.T01 MTR_4g031770 24.181 397 221 17 1 367 22 368 2.33e-19 89.0
MsG0780039154.01.T01 MTR_6g007150 28.758 306 161 17 82 367 69 337 2.85e-19 88.2
MsG0780039154.01.T01 MTR_8g062660 26.185 401 202 18 1 367 40 380 4.98e-19 89.0
MsG0780039154.01.T01 MTR_3g030310 25.700 393 225 19 1 367 39 390 5.42e-19 87.8
MsG0780039154.01.T01 MTR_0128s0110 30.222 225 122 11 151 366 4 202 8.79e-19 84.3
MsG0780039154.01.T01 MTR_5g057020 29.553 291 161 15 1 286 64 315 8.85e-19 87.0
MsG0780039154.01.T01 MTR_3g024130 30.804 224 109 11 82 288 58 252 8.99e-19 86.3
MsG0780039154.01.T01 MTR_5g007610 24.606 317 173 12 1 288 59 338 9.20e-19 87.4
MsG0780039154.01.T01 MTR_3g006640 25.237 317 166 14 82 368 18 293 1.05e-18 85.9
MsG0780039154.01.T01 MTR_7g089830 34.911 169 80 7 181 345 6 148 1.29e-18 82.0
MsG0780039154.01.T01 MTR_3g024110 24.658 292 181 10 1 286 119 377 1.46e-18 87.0
MsG0780039154.01.T01 MTR_3g009260 28.814 295 168 13 1 287 59 319 1.75e-18 86.3
MsG0780039154.01.T01 MTR_1g055070 30.000 260 129 12 1 230 67 303 2.75e-18 85.9
MsG0780039154.01.T01 MTR_3g006500 26.027 292 176 12 2 283 36 297 3.03e-18 85.5
MsG0780039154.01.T01 MTR_3g030320 32.127 221 114 10 83 295 44 236 4.08e-18 84.3
MsG0780039154.01.T01 MTR_0354s0030 45.455 99 52 2 271 369 1 97 4.47e-18 79.0
MsG0780039154.01.T01 MTR_7g070937 45.378 119 47 5 126 230 11 125 6.11e-18 80.9
MsG0780039154.01.T01 MTR_6g013270 23.907 389 231 16 1 367 47 392 6.40e-18 84.7
MsG0780039154.01.T01 MTR_3g030240 26.972 393 188 19 1 367 58 377 6.63e-18 84.7
MsG0780039154.01.T01 MTR_3g009300 27.600 250 143 10 50 288 68 290 1.41e-17 83.6
MsG0780039154.01.T01 MTR_2g079810 27.160 243 143 8 1 229 24 246 1.65e-17 82.4
MsG0780039154.01.T01 MTR_3g006530 28.481 316 155 16 1 288 58 330 1.70e-17 83.6
MsG0780039154.01.T01 MTR_1g055055 27.304 293 163 15 1 286 44 293 2.06e-17 82.8
MsG0780039154.01.T01 MTR_6g027890 29.218 243 107 11 80 288 51 262 2.24e-17 82.4
MsG0780039154.01.T01 MTR_6g048150 43.363 113 50 4 257 364 2 105 2.86e-17 77.8
MsG0780039154.01.T01 MTR_3g010620 26.460 291 170 11 1 286 54 305 3.01e-17 82.8
MsG0780039154.01.T01 MTR_5g009060 27.027 333 179 15 1 294 43 350 4.95e-17 82.4
MsG0780039154.01.T01 MTR_5g046280 28.017 232 125 11 85 301 3 207 5.10e-17 80.5
MsG0780039154.01.T01 MTR_4g023080 25.521 384 207 15 3 370 29 349 6.73e-17 81.3
MsG0780039154.01.T01 MTR_8g069515 32.716 162 83 6 1 144 34 187 7.55e-17 78.2
MsG0780039154.01.T01 MTR_3g036430 26.510 298 149 11 1 288 38 275 1.53e-16 80.5
MsG0780039154.01.T01 MTR_7g055850 33.161 193 79 9 2 153 32 215 1.57e-16 79.7
MsG0780039154.01.T01 MTR_5g046260 27.797 295 143 15 1 287 22 254 2.04e-16 79.3
MsG0780039154.01.T01 MTR_2g078850 27.055 292 185 10 1 288 48 315 2.88e-16 79.7
MsG0780039154.01.T01 MTR_1g097370 29.565 230 122 10 128 345 135 336 2.99e-16 80.5
MsG0780039154.01.T01 MTR_2g078870 26.073 303 173 12 74 367 47 307 5.20e-16 78.2
MsG0780039154.01.T01 MTR_6g053240 25.500 400 215 21 1 367 46 395 7.63e-16 78.6
MsG0780039154.01.T01 MTR_6g048140 26.100 341 193 19 1 325 57 354 1.68e-15 77.8
MsG0780039154.01.T01 MTR_3g096270 36.478 159 68 7 73 227 98 227 1.78e-15 76.6
MsG0780039154.01.T01 MTR_4g116330 25.141 354 210 15 1 345 41 348 1.85e-15 77.4
MsG0780039154.01.T01 MTR_1004s0010 25.256 293 157 13 85 367 119 359 2.51e-15 77.0
MsG0780039154.01.T01 MTR_5g057643 29.756 205 127 6 1 197 64 259 2.94e-15 75.5
MsG0780039154.01.T01 MTR_7g056723 34.000 150 81 5 59 197 10 152 3.71e-15 73.2
MsG0780039154.01.T01 MTR_8g030660 31.064 235 105 10 1 190 45 267 4.10e-15 75.1
MsG0780039154.01.T01 MTR_4g021785 26.316 380 210 17 3 370 29 350 4.86e-15 75.9
MsG0780039154.01.T01 MTR_4g023200 24.672 381 223 16 1 370 28 355 7.83e-15 75.5
MsG0780039154.01.T01 MTR_4g023150 23.622 381 227 15 1 370 28 355 1.12e-14 74.7
MsG0780039154.01.T01 MTR_7g067680 26.014 296 162 15 1 286 67 315 1.36e-14 75.1
MsG0780039154.01.T01 MTR_1g016960 36.646 161 72 8 38 192 15 151 3.12e-14 72.4
MsG0780039154.01.T01 MTR_1g016960 39.423 104 56 2 266 366 155 254 3.15e-14 72.4
MsG0780039154.01.T01 MTR_3g103020 24.543 383 229 12 1 370 38 373 3.25e-14 73.6
MsG0780039154.01.T01 MTR_3g083660 33.537 164 77 7 128 288 78 212 3.58e-14 72.4
MsG0780039154.01.T01 MTR_1g100763 26.596 282 152 15 1 278 16 246 3.66e-14 72.8
MsG0780039154.01.T01 MTR_8g073550 31.285 179 97 7 1 164 48 215 4.62e-14 71.2
MsG0780039154.01.T01 MTR_4g023130 23.861 373 186 13 3 370 29 308 4.67e-14 72.8
MsG0780039154.01.T01 MTR_6g060650 25.212 353 207 13 1 338 26 336 4.83e-14 73.2
MsG0780039154.01.T01 MTR_3g083010 23.274 391 216 16 1 347 24 374 5.07e-14 73.2
MsG0780039154.01.T01 MTR_1g113900 26.990 289 154 13 92 367 1 245 6.02e-14 71.2
MsG0780039154.01.T01 MTR_2g026010 22.164 379 204 16 2 347 23 343 6.72e-14 72.8
MsG0780039154.01.T01 MTR_7g445580 34.711 121 61 4 227 347 44 146 7.96e-14 68.6
MsG0780039154.01.T01 MTR_4g023120 25.063 395 217 17 3 370 23 365 8.88e-14 72.4
MsG0780039154.01.T01 MTR_3g034180 27.532 316 180 13 1 295 141 428 1.04e-13 72.8
MsG0780039154.01.T01 MTR_4g023070 24.112 394 226 16 1 370 21 365 2.67e-13 70.9
MsG0780039154.01.T01 MTR_2g426070 24.611 386 202 18 1 347 24 359 3.46e-13 70.9
MsG0780039154.01.T01 MTR_2g426020 24.033 362 195 14 1 331 24 336 4.62e-13 70.5
MsG0780039154.01.T01 MTR_2g024110 24.713 348 190 15 1 326 22 319 4.64e-13 70.1
MsG0780039154.01.T01 MTR_4g013190 36.000 100 57 1 27 119 19 118 5.98e-13 65.5
MsG0780039154.01.T01 MTR_0667s0010 23.016 378 212 14 1 344 24 356 6.09e-13 70.1
MsG0780039154.01.T01 MTR_6g004210 24.601 313 192 13 1 286 43 338 6.40e-13 70.1
MsG0780039154.01.T01 MTR_5g057040 31.343 201 115 9 1 192 64 250 9.48e-13 70.1
MsG0780039154.01.T01 MTR_3g009290 30.043 233 130 11 4 224 46 257 1.05e-12 67.8
MsG0780039154.01.T01 MTR_6g048120 24.207 347 198 16 1 325 54 357 1.08e-12 69.3
MsG0780039154.01.T01 MTR_4g117720 24.620 329 186 13 19 324 34 323 1.18e-12 68.9
MsG0780039154.01.T01 MTR_2g025420 22.821 390 219 15 1 347 24 374 1.68e-12 68.6
MsG0780039154.01.T01 MTR_1g112930 24.917 301 176 14 1 288 43 306 1.73e-12 68.6
MsG0780039154.01.T01 MTR_2g028160 24.317 366 202 15 1 331 23 348 2.35e-12 68.2
MsG0780039154.01.T01 MTR_4g094365 29.907 214 114 11 1 198 26 219 2.96e-12 67.8
MsG0780039154.01.T01 MTR_7g038710 54.386 57 26 0 312 368 92 148 3.38e-12 64.3
MsG0780039154.01.T01 MTR_7g062070 37.037 135 72 6 220 352 75 198 4.41e-12 65.1
MsG0780039154.01.T01 MTR_7g060930 47.692 65 29 2 210 274 19 78 4.81e-12 61.6
MsG0780039154.01.T01 MTR_5g010660 23.364 321 170 11 4 295 55 328 6.46e-12 67.0
MsG0780039154.01.T01 MTR_4g070550 25.159 314 186 10 1 286 23 315 7.49e-12 66.6
MsG0780039154.01.T01 MTR_4g053510 38.462 91 52 2 1 90 40 127 8.12e-12 62.4
MsG0780039154.01.T01 MTR_1g068835 24.281 313 171 12 1 288 22 293 8.29e-12 66.2
MsG0780039154.01.T01 MTR_3g096280 26.190 252 138 10 1 230 23 248 8.49e-12 66.2
MsG0780039154.01.T01 MTR_1g115185 26.073 303 178 14 1 288 57 328 9.67e-12 66.2
MsG0780039154.01.T01 MTR_2g021050 24.722 360 208 15 1 347 23 332 1.20e-11 65.9
MsG0780039154.01.T01 MTR_4g116330 26.923 208 130 8 1 199 41 235 1.22e-11 65.5
MsG0780039154.01.T01 MTR_4g108810 30.851 188 98 9 183 367 78 236 1.33e-11 64.3
MsG0780039154.01.T01 MTR_2g043420 38.710 93 54 2 1 92 44 134 2.34e-11 62.0
MsG0780039154.01.T01 MTR_3g058440 27.626 257 126 14 1 230 53 276 3.55e-11 63.9
MsG0780039154.01.T01 MTR_4g132560 30.811 185 83 10 127 291 38 197 4.60e-11 63.2
MsG0780039154.01.T01 MTR_4g109280 24.808 391 205 19 1 367 26 351 4.69e-11 63.9
MsG0780039154.01.T01 MTR_1g046600 30.994 171 81 7 8 149 72 234 4.78e-11 63.5
MsG0780039154.01.T01 MTR_2g028140 24.458 323 183 12 1 286 23 321 5.11e-11 64.3
MsG0780039154.01.T01 MTR_4g117850 25.220 341 179 17 2 321 42 327 7.98e-11 63.5
MsG0780039154.01.T01 MTR_2g031720 21.858 366 223 14 1 347 24 345 9.18e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039154.01.T01 AT3G06240 24.519 416 217 16 2 369 55 421 3.03e-20 92.0
MsG0780039154.01.T01 AT3G23880 28.428 299 170 11 2 286 33 301 1.73e-16 80.5

Find 67 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTGTAGCCAACTTTAA+AGG 0.166324 7:-58774824 None:intergenic
TGCGATTATCTCACTTGATT+TGG 0.224639 7:+58774945 MsG0780039154.01.T01:CDS
CAATAATTATATTGAAAGTT+TGG 0.253756 7:+58775383 MsG0780039154.01.T01:CDS
GCGATTATCTCACTTGATTT+GGG 0.271049 7:+58774946 MsG0780039154.01.T01:CDS
TGAATCTTCTTATGCAATTC+AGG 0.284281 7:+58774299 None:intergenic
TGTTTCGCTCAGATTTCTTT+TGG 0.285955 7:-58774378 None:intergenic
ATTTGAACGGCACTATTAAA+TGG 0.325214 7:+58774863 MsG0780039154.01.T01:CDS
CTACAATTGGAGGACTAATA+AGG 0.341411 7:+58775317 MsG0780039154.01.T01:CDS
GGAATTGACTATGAGACATT+TGG 0.367168 7:-58774446 None:intergenic
GACAACTAATTCTCTACAAT+TGG 0.375035 7:+58775304 MsG0780039154.01.T01:CDS
TATAAATCAAAGATAGCGTT+TGG 0.383937 7:+58774676 MsG0780039154.01.T01:CDS
TTAGTTTGGGCGATAATGTT+TGG 0.394600 7:+58774767 MsG0780039154.01.T01:CDS
GAAAGTTTGGTTTCAACAAA+TGG 0.402714 7:+58775396 MsG0780039154.01.T01:CDS
TTATAACTACGAAAAGAAAA+AGG 0.403043 7:+58775349 MsG0780039154.01.T01:CDS
TATGTTGTTGGTTCCTGCAA+TGG 0.404226 7:+58774550 MsG0780039154.01.T01:CDS
CTATTGTAGCCAACTTTAAA+GGG 0.413724 7:-58774823 None:intergenic
TCTGATACTTTCCTTGTGGC+CGG 0.430014 7:-58774628 None:intergenic
CGTCCACATGGGTGATCAAT+GGG 0.432472 7:-58774495 None:intergenic
AATGTCTCATAGTCAATTCC+TGG 0.433287 7:+58774449 MsG0780039154.01.T01:CDS
CAAACAAACCAAACCATTGC+AGG 0.433881 7:-58774563 None:intergenic
GAAGATAGGCTCTATGTTGT+TGG 0.434217 7:+58774538 MsG0780039154.01.T01:CDS
CTGGCCAGTTCGTGGTTTAG+TGG 0.447607 7:+58774468 MsG0780039154.01.T01:CDS
CTGATACTTTCCTTGTGGCC+GGG 0.451822 7:-58774627 None:intergenic
TTTATGCATTATCATATCGT+TGG 0.454432 7:+58775220 MsG0780039154.01.T01:CDS
TTGTCATCTTAAATTATACA+TGG 0.463626 7:+58775071 MsG0780039154.01.T01:CDS
TTATGCATTATCATATCGTT+GGG 0.465418 7:+58775221 MsG0780039154.01.T01:CDS
TGTTGGTTCCTGCAATGGTT+TGG 0.469659 7:+58774555 MsG0780039154.01.T01:CDS
GTCAATTCCTGGCCAGTTCG+TGG 0.470270 7:+58774460 MsG0780039154.01.T01:CDS
TATATGATGATTCGAAGAAA+AGG 0.471850 7:+58774908 MsG0780039154.01.T01:CDS
TCCATGAGCACACAAATTGT+TGG 0.471909 7:-58775036 None:intergenic
TCGTCCACATGGGTGATCAA+TGG 0.473546 7:-58774496 None:intergenic
AACTCTACATGGGAATCTCC+AGG 0.473841 7:-58774997 None:intergenic
ACTGCAGATTGACAGAAGAT+AGG 0.485732 7:+58774524 MsG0780039154.01.T01:CDS
CACTAAACCACGAACTGGCC+AGG 0.486308 7:-58774467 None:intergenic
TGCAGTGATGTTCGTCCACA+TGG 0.488655 7:-58774507 None:intergenic
ATGATAATCTTCAAATAAAG+TGG 0.489831 7:+58775172 MsG0780039154.01.T01:CDS
ATATGGAAGATGAAGAACTT+TGG 0.501243 7:+58775111 MsG0780039154.01.T01:CDS
GAATTAGTTGTCCTACTCTA+CGG 0.504274 7:-58775293 None:intergenic
TCAAGTTCATCAACTCTACA+TGG 0.504865 7:-58775008 None:intergenic
ATCTTCCATATAACAAAATG+TGG 0.506715 7:-58775099 None:intergenic
AACTAATTCTCTACAATTGG+AGG 0.512072 7:+58775307 MsG0780039154.01.T01:CDS
TTCTCCACTAAACCACGAAC+TGG 0.514656 7:-58774472 None:intergenic
TCAGGTGTGTTTGCAAGTCG+TGG 0.520598 7:+58774317 MsG0780039154.01.T01:CDS
GCCAACAATTTGTGTGCTCA+TGG 0.533412 7:+58775035 MsG0780039154.01.T01:CDS
CGTTCTCAGAATGACACAAT+GGG 0.542692 7:-58775248 None:intergenic
CGATTATCTCACTTGATTTG+GGG 0.556052 7:+58774947 MsG0780039154.01.T01:CDS
TCTTCCATATAACAAAATGT+GGG 0.573405 7:-58775098 None:intergenic
CCATTGTGTCATTCTGAGAA+CGG 0.579128 7:+58775249 MsG0780039154.01.T01:CDS
TTGGCTTTATTTCTATAACC+CGG 0.581725 7:+58774609 MsG0780039154.01.T01:CDS
TGTCATCTTAAATTATACAT+GGG 0.586766 7:+58775072 MsG0780039154.01.T01:CDS
CATGGTGGTGTGTATTTGAA+CGG 0.592989 7:+58774850 MsG0780039154.01.T01:CDS
ACTCTACATGGGAATCTCCA+GGG 0.595501 7:-58774996 None:intergenic
GTTGGCTACAATAGTCGTCA+TGG 0.603518 7:+58774832 MsG0780039154.01.T01:CDS
ATGTTGGCAAACCGTAGAGT+AGG 0.609050 7:+58775282 MsG0780039154.01.T01:CDS
ATTTCTATAACCCGGCCACA+AGG 0.619975 7:+58774617 MsG0780039154.01.T01:CDS
CTCTACATGGGAATCTCCAG+GGG 0.625518 7:-58774995 None:intergenic
CAATTGGAGGACTAATAAGG+TGG 0.631815 7:+58775320 MsG0780039154.01.T01:CDS
GAACGGTGATACATTGATGT+TGG 0.640128 7:+58775266 MsG0780039154.01.T01:CDS
CTTCCATATAACAAAATGTG+GGG 0.648239 7:-58775097 None:intergenic
CAAGTTCATCAACTCTACAT+GGG 0.657311 7:-58775007 None:intergenic
CCGTTCTCAGAATGACACAA+TGG 0.661998 7:-58775249 None:intergenic
GACTATGAGACATTTGGACA+CGG 0.680626 7:-58774440 None:intergenic
GGCTACAATAGTCGTCATGG+TGG 0.704933 7:+58774835 MsG0780039154.01.T01:CDS
GCAGTGATGTTCGTCCACAT+GGG 0.707936 7:-58774506 None:intergenic
GAACCCATTGATCACCCATG+TGG 0.711784 7:+58774492 MsG0780039154.01.T01:CDS
TATGAGACATTTGGACACGG+TGG 0.723970 7:-58774437 None:intergenic
TCTACATGGGAATCTCCAGG+GGG 0.762809 7:-58774994 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATAATTATATTGAAAGTT+TGG + Chr7:58775383-58775402 MsG0780039154.01.T01:CDS 15.0%
!!! GTTTTAATCAATTAGAAAAT+TGG + Chr7:58774590-58774609 MsG0780039154.01.T01:CDS 15.0%
!! ATGATAATCTTCAAATAAAG+TGG + Chr7:58775172-58775191 MsG0780039154.01.T01:CDS 20.0%
!! TGTCATCTTAAATTATACAT+GGG + Chr7:58775072-58775091 MsG0780039154.01.T01:CDS 20.0%
!! TTAAAGGGAATAAAAACATT+GGG - Chr7:58774811-58774830 None:intergenic 20.0%
!! TTATAACTACGAAAAGAAAA+AGG + Chr7:58775349-58775368 MsG0780039154.01.T01:CDS 20.0%
!! TTGTCATCTTAAATTATACA+TGG + Chr7:58775071-58775090 MsG0780039154.01.T01:CDS 20.0%
!! TTTAAAGGGAATAAAAACAT+TGG - Chr7:58774812-58774831 None:intergenic 20.0%
!!! ATTTAAGATGACAAAAACAA+AGG - Chr7:58775065-58775084 None:intergenic 20.0%
! ATCTTCCATATAACAAAATG+TGG - Chr7:58775102-58775121 None:intergenic 25.0%
! TATAAATCAAAGATAGCGTT+TGG + Chr7:58774676-58774695 MsG0780039154.01.T01:CDS 25.0%
! TATATGATGATTCGAAGAAA+AGG + Chr7:58774908-58774927 MsG0780039154.01.T01:CDS 25.0%
! TCTTCCATATAACAAAATGT+GGG - Chr7:58775101-58775120 None:intergenic 25.0%
! TTATGCATTATCATATCGTT+GGG + Chr7:58775221-58775240 MsG0780039154.01.T01:CDS 25.0%
! TTTATGCATTATCATATCGT+TGG + Chr7:58775220-58775239 MsG0780039154.01.T01:CDS 25.0%
!!! GGTGAATTTTGATAAAACTA+GGG - Chr7:58774360-58774379 None:intergenic 25.0%
!!! GTTTTTATTCCCTTTAAAGT+TGG + Chr7:58774814-58774833 MsG0780039154.01.T01:CDS 25.0%
!!! TGGTGAATTTTGATAAAACT+AGG - Chr7:58774361-58774380 None:intergenic 25.0%
AACTAATTCTCTACAATTGG+AGG + Chr7:58775307-58775326 MsG0780039154.01.T01:CDS 30.0%
ACTATTGTAGCCAACTTTAA+AGG - Chr7:58774827-58774846 None:intergenic 30.0%
ATATGGAAGATGAAGAACTT+TGG + Chr7:58775111-58775130 MsG0780039154.01.T01:CDS 30.0%
ATTTGAACGGCACTATTAAA+TGG + Chr7:58774863-58774882 MsG0780039154.01.T01:CDS 30.0%
CTATTGTAGCCAACTTTAAA+GGG - Chr7:58774826-58774845 None:intergenic 30.0%
CTTCCATATAACAAAATGTG+GGG - Chr7:58775100-58775119 None:intergenic 30.0%
GACAACTAATTCTCTACAAT+TGG + Chr7:58775304-58775323 MsG0780039154.01.T01:CDS 30.0%
TAACTACGAAAAGAAAAAGG+TGG + Chr7:58775352-58775371 MsG0780039154.01.T01:CDS 30.0%
! AAAAATCAGGGTCTTTTACA+AGG + Chr7:58774650-58774669 MsG0780039154.01.T01:CDS 30.0%
! GAAAGTTTGGTTTCAACAAA+TGG + Chr7:58775396-58775415 MsG0780039154.01.T01:CDS 30.0%
! TTTTTCTGATACTTTCCTTG+TGG - Chr7:58774635-58774654 None:intergenic 30.0%
!! ACTTTGGAGTTGAAAAATCT+TGG + Chr7:58775127-58775146 MsG0780039154.01.T01:CDS 30.0%
!! AGGAAAGTATCAGAAAAATC+AGG + Chr7:58774637-58774656 MsG0780039154.01.T01:CDS 30.0%
!! GGAAAGTATCAGAAAAATCA+GGG + Chr7:58774638-58774657 MsG0780039154.01.T01:CDS 30.0%
!! TTGGCTTTATTTCTATAACC+CGG + Chr7:58774609-58774628 MsG0780039154.01.T01:CDS 30.0%
!!! AGATGTGAGAGTTTTTAGTT+TGG + Chr7:58774753-58774772 MsG0780039154.01.T01:CDS 30.0%
!!! GATGTGAGAGTTTTTAGTTT+GGG + Chr7:58774754-58774773 MsG0780039154.01.T01:CDS 30.0%
AATGTCTCATAGTCAATTCC+TGG + Chr7:58774449-58774468 MsG0780039154.01.T01:CDS 35.0%
CAAGTTCATCAACTCTACAT+GGG - Chr7:58775010-58775029 None:intergenic 35.0%
CTACAATTGGAGGACTAATA+AGG + Chr7:58775317-58775336 MsG0780039154.01.T01:CDS 35.0%
GAATTAGTTGTCCTACTCTA+CGG - Chr7:58775296-58775315 None:intergenic 35.0%
GCGATTATCTCACTTGATTT+GGG + Chr7:58774946-58774965 MsG0780039154.01.T01:CDS 35.0%
GGAATTGACTATGAGACATT+TGG - Chr7:58774449-58774468 None:intergenic 35.0%
TCAAGTTCATCAACTCTACA+TGG - Chr7:58775011-58775030 None:intergenic 35.0%
TGCGATTATCTCACTTGATT+TGG + Chr7:58774945-58774964 MsG0780039154.01.T01:CDS 35.0%
! CGATTATCTCACTTGATTTG+GGG + Chr7:58774947-58774966 MsG0780039154.01.T01:CDS 35.0%
! TGTTTCGCTCAGATTTCTTT+TGG - Chr7:58774381-58774400 None:intergenic 35.0%
! TTAGTTTGGGCGATAATGTT+TGG + Chr7:58774767-58774786 MsG0780039154.01.T01:CDS 35.0%
!! GAACCCCACATTTTGTTATA+TGG + Chr7:58775094-58775113 MsG0780039154.01.T01:CDS 35.0%
ACTGCAGATTGACAGAAGAT+AGG + Chr7:58774524-58774543 MsG0780039154.01.T01:CDS 40.0%
CAAACAAACCAAACCATTGC+AGG - Chr7:58774566-58774585 None:intergenic 40.0%
CAATTGGAGGACTAATAAGG+TGG + Chr7:58775320-58775339 MsG0780039154.01.T01:CDS 40.0%
CGTTCTCAGAATGACACAAT+GGG - Chr7:58775251-58775270 None:intergenic 40.0%
GAACGGTGATACATTGATGT+TGG + Chr7:58775266-58775285 MsG0780039154.01.T01:CDS 40.0%
GAAGATAGGCTCTATGTTGT+TGG + Chr7:58774538-58774557 MsG0780039154.01.T01:CDS 40.0%
GACTATGAGACATTTGGACA+CGG - Chr7:58774443-58774462 None:intergenic 40.0%
TCCATGAGCACACAAATTGT+TGG - Chr7:58775039-58775058 None:intergenic 40.0%
! CATGGTGGTGTGTATTTGAA+CGG + Chr7:58774850-58774869 MsG0780039154.01.T01:CDS 40.0%
! CCATTGTGTCATTCTGAGAA+CGG + Chr7:58775249-58775268 MsG0780039154.01.T01:CDS 40.0%
!! TATGTTGTTGGTTCCTGCAA+TGG + Chr7:58774550-58774569 MsG0780039154.01.T01:CDS 40.0%
AACTCTACATGGGAATCTCC+AGG - Chr7:58775000-58775019 None:intergenic 45.0%
ACTCTACATGGGAATCTCCA+GGG - Chr7:58774999-58775018 None:intergenic 45.0%
ATGTTGGCAAACCGTAGAGT+AGG + Chr7:58775282-58775301 MsG0780039154.01.T01:CDS 45.0%
ATTTCTATAACCCGGCCACA+AGG + Chr7:58774617-58774636 MsG0780039154.01.T01:CDS 45.0%
CCGTTCTCAGAATGACACAA+TGG - Chr7:58775252-58775271 None:intergenic 45.0%
GCCAACAATTTGTGTGCTCA+TGG + Chr7:58775035-58775054 MsG0780039154.01.T01:CDS 45.0%
GTTGGCTACAATAGTCGTCA+TGG + Chr7:58774832-58774851 MsG0780039154.01.T01:CDS 45.0%
TATGAGACATTTGGACACGG+TGG - Chr7:58774440-58774459 None:intergenic 45.0%
TCTGATACTTTCCTTGTGGC+CGG - Chr7:58774631-58774650 None:intergenic 45.0%
TTCTCCACTAAACCACGAAC+TGG - Chr7:58774475-58774494 None:intergenic 45.0%
!! TGTTGGTTCCTGCAATGGTT+TGG + Chr7:58774555-58774574 MsG0780039154.01.T01:CDS 45.0%
AGGGGGCAACAATTGTGTGT+AGG - Chr7:58774980-58774999 None:intergenic 50.0%
CGTCCACATGGGTGATCAAT+GGG - Chr7:58774498-58774517 None:intergenic 50.0%
CTCTACATGGGAATCTCCAG+GGG - Chr7:58774998-58775017 None:intergenic 50.0%
CTGATACTTTCCTTGTGGCC+GGG - Chr7:58774630-58774649 None:intergenic 50.0%
GAACCCATTGATCACCCATG+TGG + Chr7:58774492-58774511 MsG0780039154.01.T01:CDS 50.0%
GCAGTGATGTTCGTCCACAT+GGG - Chr7:58774509-58774528 None:intergenic 50.0%
GGCTACAATAGTCGTCATGG+TGG + Chr7:58774835-58774854 MsG0780039154.01.T01:CDS 50.0%
TACACACAATTGTTGCCCCC+TGG + Chr7:58774979-58774998 MsG0780039154.01.T01:CDS 50.0%
TCAGGTGTGTTTGCAAGTCG+TGG + Chr7:58774317-58774336 MsG0780039154.01.T01:CDS 50.0%
TCGTCCACATGGGTGATCAA+TGG - Chr7:58774499-58774518 None:intergenic 50.0%
TCTACATGGGAATCTCCAGG+GGG - Chr7:58774997-58775016 None:intergenic 50.0%
TGCAGTGATGTTCGTCCACA+TGG - Chr7:58774510-58774529 None:intergenic 50.0%
CACTAAACCACGAACTGGCC+AGG - Chr7:58774470-58774489 None:intergenic 55.0%
CTGGCCAGTTCGTGGTTTAG+TGG + Chr7:58774468-58774487 MsG0780039154.01.T01:CDS 55.0%
GTCAATTCCTGGCCAGTTCG+TGG + Chr7:58774460-58774479 MsG0780039154.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 58774310 58775425 58774310 ID=MsG0780039154.01;Name=MsG0780039154.01
Chr7 mRNA 58774310 58775425 58774310 ID=MsG0780039154.01.T01;Parent=MsG0780039154.01;Name=MsG0780039154.01.T01;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|0|1|0|371
Chr7 exon 58774310 58775425 58774310 ID=MsG0780039154.01.T01:exon:15820;Parent=MsG0780039154.01.T01
Chr7 CDS 58774310 58775425 58774310 ID=MsG0780039154.01.T01:cds;Parent=MsG0780039154.01.T01
Gene Sequence

>MsG0780039154.01.T01

ATGCAATTCAGGTGTGTTTGCAAGTCGTGGAATGCTTTAATCTATAGCCCTAGTTTTATCAAAATTCACCAAAAGAAATCTGAGCGAAACAAACAAATAATACGAATAGAGCACGACGACTTGACTTCCACCGTGTCCAAATGTCTCATAGTCAATTCCTGGCCAGTTCGTGGTTTAGTGGAGAACCCATTGATCACCCATGTGGACGAACATCACTGCAGATTGACAGAAGATAGGCTCTATGTTGTTGGTTCCTGCAATGGTTTGGTTTGTTTGCTTTGTTTTAATCAATTAGAAAATTGGCTTTATTTCTATAACCCGGCCACAAGGAAAGTATCAGAAAAATCAGGGTCTTTTACAAGGACATATAAATCAAAGATAGCGTTTGGTTTTGATAATTCAACTGACACGTATAAAGTAGTAGAGTTCTGTCAAAAGAGTAGAGATGTGAGAGTTTTTAGTTTGGGCGATAATGTTTGGAGAAATATTCAAAGTTTTCCCAATGTTTTTATTCCCTTTAAAGTTGGCTACAATAGTCGTCATGGTGGTGTGTATTTGAACGGCACTATTAAATGGTTGATCTTTCGAAATGATATTATATATGATGATTCGAAGAAAAGGAAGTTTGAGCATTATGCGATTATCTCACTTGATTTGGGGATAGAGACCTACACACAATTGTTGCCCCCTGGAGATTCCCATGTAGAGTTGATGAACTTGAATGAGCCAACAATTTGTGTGCTCATGGATTGCCTTTGTTTTTGTCATCTTAAATTATACATGGGAACCCCACATTTTGTTATATGGAAGATGAAGAACTTTGGAGTTGAAAAATCTTGGAGTCAATTTCTTAACATTAGTCATGATAATCTTCAAATAAAGTGGTTCGAACATCGTAAGATTAGTCAATTTTATGCATTATCATATCGTTGGGTGTTCCCATTGTGTCATTCTGAGAACGGTGATACATTGATGTTGGCAAACCGTAGAGTAGGACAACTAATTCTCTACAATTGGAGGACTAATAAGGTGGAGCGAGTTATAACTACGAAAAGAAAAAGGTGGATTTTTCTCAATAATTATATTGAAAGTTTGGTTTCAACAAATGGAAAGTAA
Protein sequence

>MsG0780039154.01.T01

MQFRCVCKSWNALIYSPSFIKIHQKKSERNKQIIRIEHDDLTSTVSKCLIVNSWPVRGLVENPLITHVDEHHCRLTEDRLYVVGSCNGLVCLLCFNQLENWLYFYNPATRKVSEKSGSFTRTYKSKIAFGFDNSTDTYKVVEFCQKSRDVRVFSLGDNVWRNIQSFPNVFIPFKVGYNSRHGGVYLNGTIKWLIFRNDIIYDDSKKRKFEHYAIISLDLGIETYTQLLPPGDSHVELMNLNEPTICVLMDCLCFCHLKLYMGTPHFVIWKMKNFGVEKSWSQFLNISHDNLQIKWFEHRKISQFYALSYRWVFPLCHSENGDTLMLANRRVGQLILYNWRTNKVERVITTKRKRWIFLNNYIESLVSTNGK*