AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038489.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038489.01.T01 MTR_7g056290 78.035 346 65 3 7 345 80 421 0.0 543
MsG0780038489.01.T01 MTR_7g056390 77.208 351 68 4 1 344 71 416 0.0 538
MsG0780038489.01.T01 MTR_3g072470 71.388 353 87 6 1 345 72 418 1.71e-173 488
MsG0780038489.01.T01 MTR_2g043410 62.963 351 108 8 7 346 79 418 9.81e-151 431
MsG0780038489.01.T01 MTR_0464s0020 62.817 355 115 6 5 346 80 430 3.31e-149 427
MsG0780038489.01.T01 MTR_2g043400 64.223 341 102 7 16 346 89 419 3.57e-146 419
MsG0780038489.01.T01 MTR_7g056003 61.560 359 108 8 1 346 68 409 2.90e-144 414
MsG0780038489.01.T01 MTR_3g437520 63.030 330 104 7 11 328 86 409 1.62e-140 407
MsG0780038489.01.T01 MTR_7g055987 64.659 249 71 3 47 295 101 332 8.53e-111 327
MsG0780038489.01.T01 MTR_1g442850 46.418 349 135 10 13 344 62 375 1.03e-91 279
MsG0780038489.01.T01 MTR_7g056260 57.299 274 88 6 1 267 66 317 2.19e-91 276
MsG0780038489.01.T01 MTR_7g057270 42.286 350 160 9 13 344 88 413 2.08e-87 270
MsG0780038489.01.T01 MTR_1g088120 42.234 367 153 14 13 346 72 412 8.12e-85 263
MsG0780038489.01.T01 MTR_4g034860 43.491 338 135 9 11 323 86 392 1.64e-84 261
MsG0780038489.01.T01 MTR_5g069930 45.679 324 143 12 32 343 73 375 3.67e-84 259
MsG0780038489.01.T01 MTR_5g069760 44.058 345 149 10 9 344 60 369 9.37e-84 258
MsG0780038489.01.T01 MTR_4g013185 41.192 369 165 12 6 344 79 425 1.87e-83 259
MsG0780038489.01.T01 MTR_4g013175 42.818 369 157 13 6 343 79 424 1.51e-82 257
MsG0780038489.01.T01 MTR_7g055870 43.716 366 166 10 13 346 69 426 1.52e-82 257
MsG0780038489.01.T01 MTR_7g056503 44.000 350 146 11 15 345 80 398 8.04e-82 254
MsG0780038489.01.T01 MTR_7g078900 43.360 369 152 12 6 344 81 422 3.38e-81 253
MsG0780038489.01.T01 MTR_7g055930 42.782 381 171 12 4 346 55 426 7.67e-81 253
MsG0780038489.01.T01 MTR_4g129190 42.697 356 155 13 10 344 62 389 1.44e-80 251
MsG0780038489.01.T01 MTR_7g060940 44.728 313 134 6 47 343 103 392 9.00e-80 249
MsG0780038489.01.T01 MTR_7g050520 42.941 340 156 10 11 343 80 388 9.95e-80 249
MsG0780038489.01.T01 MTR_7g056717 43.966 348 148 11 6 344 76 385 1.10e-79 248
MsG0780038489.01.T01 MTR_7g050480 45.875 303 140 8 47 343 104 388 1.22e-79 248
MsG0780038489.01.T01 MTR_4g013180 48.014 277 124 6 61 322 99 370 7.63e-79 249
MsG0780038489.01.T01 MTR_8g066440 42.775 346 150 7 22 346 85 403 6.86e-78 244
MsG0780038489.01.T01 MTR_6g065510 50.554 271 113 8 85 344 70 330 8.58e-78 242
MsG0780038489.01.T01 MTR_7g056710 43.567 342 145 12 13 343 75 379 1.48e-77 243
MsG0780038489.01.T01 MTR_7g060960 44.850 301 131 6 51 343 93 366 6.72e-77 241
MsG0780038489.01.T01 MTR_7g061090 42.297 357 153 13 6 344 84 405 6.83e-77 242
MsG0780038489.01.T01 MTR_7g091630 41.484 364 154 13 15 346 96 432 7.65e-77 243
MsG0780038489.01.T01 MTR_5g056020 45.031 322 134 9 60 345 107 421 8.36e-77 244
MsG0780038489.01.T01 MTR_7g056737 45.775 284 132 5 48 323 100 369 1.18e-76 241
MsG0780038489.01.T01 MTR_0128s0010 42.994 314 151 10 47 346 100 399 2.21e-76 240
MsG0780038489.01.T01 MTR_0649s0020 45.541 314 148 10 46 345 84 388 3.58e-76 239
MsG0780038489.01.T01 MTR_5g068040 47.682 302 132 9 56 343 90 379 4.56e-76 239
MsG0780038489.01.T01 MTR_6g055210 42.149 363 151 15 15 345 85 420 4.65e-76 241
MsG0780038489.01.T01 MTR_7g077910 44.915 354 153 10 12 344 3 335 7.59e-76 237
MsG0780038489.01.T01 MTR_7g052150 41.570 344 167 10 8 343 81 398 9.28e-76 239
MsG0780038489.01.T01 MTR_7g078040 40.947 359 167 9 22 344 83 432 2.27e-75 239
MsG0780038489.01.T01 MTR_4g030830 41.322 363 167 10 1 345 60 394 4.39e-75 237
MsG0780038489.01.T01 MTR_7g056173 50.413 242 111 5 110 343 25 265 4.09e-74 232
MsG0780038489.01.T01 MTR_7g055830 48.592 284 117 7 91 346 76 358 4.52e-74 233
MsG0780038489.01.T01 MTR_7g078840 40.751 373 165 11 8 344 79 431 1.98e-73 234
MsG0780038489.01.T01 MTR_4g033495 44.654 318 135 9 46 342 105 402 2.18e-73 234
MsG0780038489.01.T01 MTR_7g077970 40.327 367 162 10 12 344 78 421 2.48e-73 233
MsG0780038489.01.T01 MTR_7g055953 52.137 234 104 5 111 344 89 314 5.33e-73 229
MsG0780038489.01.T01 MTR_2g047892 40.909 308 154 8 51 345 105 397 3.55e-72 229
MsG0780038489.01.T01 MTR_7g079160 42.229 341 150 13 9 322 80 400 7.51e-72 231
MsG0780038489.01.T01 MTR_0242s0060 37.912 364 179 7 19 343 61 416 1.07e-71 229
MsG0780038489.01.T01 MTR_0242s0040 37.912 364 179 7 19 343 61 416 1.07e-71 229
MsG0780038489.01.T01 MTR_6g016285 42.183 339 137 11 47 345 99 418 1.10e-71 229
MsG0780038489.01.T01 MTR_7g061050 41.888 339 145 11 22 344 81 383 1.34e-71 228
MsG0780038489.01.T01 MTR_7g055977 42.169 332 169 8 19 344 66 380 1.39e-71 228
MsG0780038489.01.T01 MTR_7g066850 43.730 311 152 11 49 346 106 406 1.80e-71 229
MsG0780038489.01.T01 MTR_2g010950 38.728 346 169 10 18 344 83 404 1.86e-71 228
MsG0780038489.01.T01 MTR_7g077990 41.124 338 161 10 11 341 84 390 1.22e-70 226
MsG0780038489.01.T01 MTR_3g080370 41.617 334 146 10 47 345 99 418 1.43e-70 227
MsG0780038489.01.T01 MTR_6g092560 40.184 326 152 10 46 345 88 396 2.85e-70 226
MsG0780038489.01.T01 MTR_4g030980 40.556 360 172 14 15 345 82 428 3.16e-70 225
MsG0780038489.01.T01 MTR_7g113500 38.617 347 161 12 17 344 68 381 5.51e-70 223
MsG0780038489.01.T01 MTR_4g031020 43.082 318 146 11 51 345 123 428 7.29e-70 224
MsG0780038489.01.T01 MTR_7g062060 42.373 354 138 15 16 344 87 399 7.75e-70 223
MsG0780038489.01.T01 MTR_4g019990 41.926 353 153 15 12 345 70 389 1.07e-69 223
MsG0780038489.01.T01 MTR_4g008790 42.154 325 140 10 10 322 125 413 1.50e-69 224
MsG0780038489.01.T01 MTR_7g056570 43.322 307 144 8 48 344 96 382 1.56e-69 224
MsG0780038489.01.T01 MTR_6g042600 68.862 167 38 2 180 340 162 320 3.46e-69 222
MsG0780038489.01.T01 MTR_6g042600 61.538 65 24 1 62 126 107 170 4.52e-17 82.0
MsG0780038489.01.T01 MTR_2g047895 43.816 283 127 9 53 322 26 289 3.74e-69 220
MsG0780038489.01.T01 MTR_7g028660 39.377 353 145 10 16 344 71 378 1.77e-68 219
MsG0780038489.01.T01 MTR_7g056200 42.997 307 140 8 48 346 104 383 2.14e-68 219
MsG0780038489.01.T01 MTR_4g030090 42.075 347 161 15 19 345 74 400 3.03e-68 219
MsG0780038489.01.T01 MTR_0128s0020 43.322 307 141 10 51 343 105 392 2.64e-67 217
MsG0780038489.01.T01 MTR_7g078860 42.342 333 142 12 6 322 78 376 2.70e-67 217
MsG0780038489.01.T01 MTR_7g077070 37.875 367 175 10 11 344 83 429 3.27e-67 218
MsG0780038489.01.T01 MTR_7g061060 40.828 338 150 10 1 323 65 367 4.89e-67 216
MsG0780038489.01.T01 MTR_7g070830 44.099 322 129 13 61 344 112 420 1.65e-66 216
MsG0780038489.01.T01 MTR_2g047200 40.774 336 155 14 22 345 91 394 2.21e-66 214
MsG0780038489.01.T01 MTR_7g066100 41.737 357 142 13 16 344 75 393 3.14e-66 214
MsG0780038489.01.T01 MTR_7g009265 41.693 319 152 9 51 346 18 325 5.07e-66 211
MsG0780038489.01.T01 MTR_3g464470 42.574 303 134 11 64 346 99 381 7.82e-66 213
MsG0780038489.01.T01 MTR_2g010920 37.222 360 169 11 15 344 92 424 8.78e-66 214
MsG0780038489.01.T01 MTR_0707s0020 39.560 364 148 11 14 345 121 444 1.05e-65 214
MsG0780038489.01.T01 MTR_3g464500 41.806 299 150 10 62 346 116 404 1.35e-65 213
MsG0780038489.01.T01 MTR_0128s0070 40.984 305 150 8 51 343 109 395 2.01e-65 212
MsG0780038489.01.T01 MTR_6g086920 38.978 372 153 12 14 345 133 470 3.86e-65 214
MsG0780038489.01.T01 MTR_7g056760 37.705 366 164 12 4 345 80 405 4.81e-65 211
MsG0780038489.01.T01 MTR_7g091640 43.321 277 117 9 13 271 94 348 8.34e-65 210
MsG0780038489.01.T01 MTR_7g070880 43.478 322 131 12 61 344 112 420 1.87e-64 210
MsG0780038489.01.T01 MTR_5g058620 43.885 278 120 9 94 343 11 280 2.21e-64 206
MsG0780038489.01.T01 MTR_1g058870 43.885 278 120 9 94 343 11 280 2.21e-64 206
MsG0780038489.01.T01 MTR_5g096710 41.587 315 153 11 47 346 102 400 3.42e-64 209
MsG0780038489.01.T01 MTR_4g011660 39.820 334 157 11 44 346 99 419 7.81e-64 208
MsG0780038489.01.T01 MTR_4g024890 37.830 341 170 10 16 344 74 384 1.07e-63 207
MsG0780038489.01.T01 MTR_7g066840 40.323 310 160 9 47 346 105 399 1.09e-63 207
MsG0780038489.01.T01 MTR_7g445890 41.776 304 150 9 64 346 87 384 1.27e-63 207
MsG0780038489.01.T01 MTR_5g043160 39.726 365 183 12 8 345 104 458 2.26e-63 208
MsG0780038489.01.T01 MTR_1g071010 37.535 357 168 13 8 346 69 388 3.54e-63 206
MsG0780038489.01.T01 MTR_7g061010 41.503 306 147 6 47 343 104 386 5.01e-63 206
MsG0780038489.01.T01 MTR_2g047878 41.391 302 130 9 53 345 101 364 8.43e-63 204
MsG0780038489.01.T01 MTR_3g013470 40.000 310 143 9 47 339 89 372 8.28e-62 202
MsG0780038489.01.T01 MTR_2g010900 38.095 315 153 10 6 300 34 326 8.04e-61 200
MsG0780038489.01.T01 MTR_0097s0030 36.517 356 173 8 6 345 70 388 1.12e-60 199
MsG0780038489.01.T01 MTR_2g047240 36.517 356 173 8 6 345 70 388 1.12e-60 199
MsG0780038489.01.T01 MTR_7g066030 39.655 348 159 11 21 344 82 402 5.43e-60 198
MsG0780038489.01.T01 MTR_4g129160 42.466 292 136 8 28 301 83 360 1.19e-59 196
MsG0780038489.01.T01 MTR_2g006360 38.395 349 165 11 15 343 43 361 1.94e-59 196
MsG0780038489.01.T01 MTR_7g022600 37.135 377 176 14 1 345 75 422 3.00e-59 197
MsG0780038489.01.T01 MTR_7g066000 42.540 315 133 14 54 343 110 401 4.77e-59 196
MsG0780038489.01.T01 MTR_7g034310 46.610 236 102 4 110 344 15 227 6.42e-59 190
MsG0780038489.01.T01 MTR_2g461450 40.136 294 140 8 41 324 87 354 8.99e-59 194
MsG0780038489.01.T01 MTR_6g017280 38.028 355 173 11 9 346 65 389 2.30e-57 191
MsG0780038489.01.T01 MTR_4g030760 37.950 361 155 14 1 345 124 431 4.08e-57 191
MsG0780038489.01.T01 MTR_7g052670 36.968 376 169 13 8 345 80 425 4.90e-57 191
MsG0780038489.01.T01 MTR_6g088385 41.115 287 117 8 89 345 55 319 1.61e-56 187
MsG0780038489.01.T01 MTR_7g056797 39.104 335 168 11 28 345 88 403 3.98e-56 188
MsG0780038489.01.T01 MTR_2g027820 37.542 301 121 6 47 343 62 299 2.56e-55 183
MsG0780038489.01.T01 MTR_6g017295 39.550 311 140 9 51 323 28 328 4.61e-55 189
MsG0780038489.01.T01 MTR_7g078960 39.216 306 138 8 71 346 1 288 6.26e-55 181
MsG0780038489.01.T01 MTR_7g035295 35.593 354 167 10 8 346 74 381 7.36e-55 184
MsG0780038489.01.T01 MTR_6g017305 40.071 282 146 7 82 346 8 283 7.91e-55 181
MsG0780038489.01.T01 MTR_7g062100 37.464 347 178 13 10 346 81 398 1.23e-54 184
MsG0780038489.01.T01 MTR_5g011350 41.767 249 111 8 3 246 27 246 1.28e-54 179
MsG0780038489.01.T01 MTR_1g029650 37.079 356 169 14 13 343 77 402 4.00e-53 180
MsG0780038489.01.T01 MTR_1g112010 38.907 311 135 11 47 345 58 325 5.57e-53 177
MsG0780038489.01.T01 MTR_7g091610 42.453 212 112 4 138 346 44 248 1.19e-52 174
MsG0780038489.01.T01 MTR_2g437110 38.304 342 147 15 31 345 89 393 3.50e-51 177
MsG0780038489.01.T01 MTR_7g056820 35.294 340 165 12 16 343 77 373 8.71e-51 173
MsG0780038489.01.T01 MTR_4g128320 39.300 257 111 7 79 322 33 257 1.33e-49 167
MsG0780038489.01.T01 MTR_7g056170 33.248 391 162 12 4 346 122 461 2.50e-49 172
MsG0780038489.01.T01 MTR_6g081280 40.081 247 116 7 109 344 15 240 2.57e-49 166
MsG0780038489.01.T01 MTR_7g056023 39.098 266 133 9 5 246 13 273 7.70e-49 166
MsG0780038489.01.T01 MTR_8g101940 39.937 318 140 16 47 345 83 368 9.28e-49 168
MsG0780038489.01.T01 MTR_4g030110 34.808 339 158 14 13 333 92 385 5.81e-48 166
MsG0780038489.01.T01 MTR_7g066010 35.635 362 139 15 9 344 76 369 9.51e-48 165
MsG0780038489.01.T01 MTR_6g017270 35.097 359 130 11 8 346 67 342 2.47e-47 163
MsG0780038489.01.T01 MTR_7g022670 34.971 346 155 11 1 345 75 351 3.67e-47 163
MsG0780038489.01.T01 MTR_2g017720 42.478 226 107 6 121 340 88 296 6.05e-47 164
MsG0780038489.01.T01 MTR_4g037465 36.678 289 143 11 62 330 113 381 1.87e-46 162
MsG0780038489.01.T01 MTR_7g066060 36.076 316 155 10 58 346 113 408 2.97e-46 164
MsG0780038489.01.T01 MTR_7g066080 35.312 320 155 8 64 346 112 416 6.91e-45 159
MsG0780038489.01.T01 MTR_5g069950 43.229 192 77 6 89 272 35 202 1.29e-44 152
MsG0780038489.01.T01 MTR_7g061940 43.689 206 95 7 113 314 78 266 1.57e-44 154
MsG0780038489.01.T01 MTR_4g030790 37.676 284 136 12 16 270 16 287 3.29e-44 155
MsG0780038489.01.T01 MTR_7g037670 35.599 309 119 13 50 344 90 332 6.16e-44 154
MsG0780038489.01.T01 MTR_7g445750 37.778 270 117 10 15 256 85 331 1.28e-43 153
MsG0780038489.01.T01 MTR_2g010935 40.000 235 106 6 117 344 43 249 3.18e-43 150
MsG0780038489.01.T01 MTR_1g015730 39.130 299 135 12 64 343 123 393 4.57e-42 151
MsG0780038489.01.T01 MTR_4g006350 34.114 299 162 11 62 343 593 873 1.23e-41 155
MsG0780038489.01.T01 MTR_0267s0050 31.596 307 176 7 54 343 93 382 8.03e-40 145
MsG0780038489.01.T01 MTR_7g070440 36.039 308 141 13 62 343 93 370 5.24e-39 142
MsG0780038489.01.T01 MTR_4g020000 40.329 243 116 7 94 322 95 322 9.18e-39 141
MsG0780038489.01.T01 MTR_3g013950 31.715 309 175 8 54 343 93 384 2.69e-38 140
MsG0780038489.01.T01 MTR_7g030040 34.965 286 109 7 64 345 125 337 2.17e-37 137
MsG0780038489.01.T01 MTR_1g015740 31.389 360 134 13 1 343 62 325 6.13e-37 135
MsG0780038489.01.T01 MTR_2g021150 33.121 314 156 11 46 344 94 368 7.01e-37 136
MsG0780038489.01.T01 MTR_1g047490 39.035 228 92 7 61 268 107 307 1.74e-36 134
MsG0780038489.01.T01 MTR_8g030630 43.169 183 90 5 149 328 73 244 3.06e-36 136
MsG0780038489.01.T01 MTR_8g030630 39.267 191 86 5 131 321 280 440 1.95e-33 129
MsG0780038489.01.T01 MTR_2g060555 35.889 287 120 12 71 333 30 276 4.69e-36 132
MsG0780038489.01.T01 MTR_0128s0110 34.450 209 111 6 132 332 2 192 7.46e-35 127
MsG0780038489.01.T01 MTR_7g006360 32.982 285 108 7 75 344 59 275 3.55e-34 127
MsG0780038489.01.T01 MTR_7g078880 35.808 229 107 7 131 341 105 311 2.19e-33 127
MsG0780038489.01.T01 MTR_7g078940 41.848 184 87 7 60 226 149 329 2.93e-31 122
MsG0780038489.01.T01 MTR_2g029990 34.343 297 137 13 64 344 148 402 5.52e-31 121
MsG0780038489.01.T01 MTR_2g021190 34.416 308 124 16 64 344 116 372 5.64e-31 120
MsG0780038489.01.T01 MTR_7g058630 38.728 173 98 3 174 346 17 181 2.66e-30 114
MsG0780038489.01.T01 MTR_7g070900 38.095 210 78 7 83 271 199 377 1.34e-29 118
MsG0780038489.01.T01 MTR_1g097490 32.013 303 144 10 57 344 135 390 4.23e-29 115
MsG0780038489.01.T01 MTR_1g050542 33.003 303 141 14 62 344 144 404 4.78e-29 116
MsG0780038489.01.T01 MTR_2g046920 32.090 268 143 10 62 321 117 353 6.45e-29 115
MsG0780038489.01.T01 MTR_2g046860 32.103 271 144 10 62 321 5 246 6.78e-29 114
MsG0780038489.01.T01 MTR_1g094210 33.088 272 126 11 6 269 113 336 9.01e-29 115
MsG0780038489.01.T01 MTR_1g094210 33.088 272 126 11 6 269 113 336 9.03e-29 115
MsG0780038489.01.T01 MTR_1g097560 32.296 257 108 10 61 301 126 332 2.17e-28 114
MsG0780038489.01.T01 MTR_1g097330 29.245 318 163 10 16 321 76 343 7.88e-28 112
MsG0780038489.01.T01 MTR_7g013590 30.128 312 167 13 54 346 115 394 7.90e-28 112
MsG0780038489.01.T01 MTR_3g013770 31.525 295 138 12 54 323 117 372 2.72e-27 111
MsG0780038489.01.T01 MTR_2g078870 31.494 308 154 15 55 344 39 307 6.39e-27 108
MsG0780038489.01.T01 MTR_7g061100 41.860 172 70 7 49 211 71 221 7.46e-27 108
MsG0780038489.01.T01 MTR_2g046830 30.576 278 148 9 62 328 118 361 8.18e-27 110
MsG0780038489.01.T01 MTR_6g007135 31.126 302 161 14 60 344 118 389 8.85e-27 109
MsG0780038489.01.T01 MTR_2g047832 31.295 278 152 10 62 321 122 378 1.32e-26 109
MsG0780038489.01.T01 MTR_7g066040 36.571 175 82 7 63 211 24 195 1.38e-26 106
MsG0780038489.01.T01 MTR_2g046800 31.457 302 141 13 62 344 138 392 1.61e-26 108
MsG0780038489.01.T01 MTR_2g046900 31.229 301 152 12 62 344 121 384 2.76e-26 108
MsG0780038489.01.T01 MTR_1g054575 35.294 221 106 7 62 270 141 336 5.49e-26 109
MsG0780038489.01.T01 MTR_3g036290 31.461 267 124 11 54 292 107 342 7.99e-26 106
MsG0780038489.01.T01 MTR_7g070937 43.939 132 61 4 110 229 10 140 1.02e-25 101
MsG0780038489.01.T01 MTR_7g056793 31.120 241 103 8 110 343 46 230 1.08e-25 103
MsG0780038489.01.T01 MTR_5g022420 30.627 271 131 11 62 318 118 345 1.09e-25 106
MsG0780038489.01.T01 MTR_6g004660 30.233 301 153 14 64 344 117 380 1.23e-25 106
MsG0780038489.01.T01 MTR_3g014570 31.419 296 125 12 49 316 111 356 1.32e-25 106
MsG0780038489.01.T01 MTR_3g014540 32.353 238 111 9 49 267 111 317 4.02e-25 104
MsG0780038489.01.T01 MTR_2g055970 35.273 275 113 17 14 269 271 499 5.55e-25 106
MsG0780038489.01.T01 MTR_2g021155 30.363 303 150 14 63 346 127 387 5.88e-25 106
MsG0780038489.01.T01 MTR_2g021155 30.418 263 129 14 86 323 702 935 2.55e-16 80.9
MsG0780038489.01.T01 MTR_3g055000 39.310 145 68 4 201 344 1 126 6.29e-25 98.2
MsG0780038489.01.T01 MTR_3g007430 33.730 252 109 11 64 290 132 350 6.29e-25 104
MsG0780038489.01.T01 MTR_8g467140 34.307 274 117 17 14 269 92 320 7.01e-25 103
MsG0780038489.01.T01 MTR_7g050490 53.398 103 41 4 47 146 90 188 7.92e-25 99.8
MsG0780038489.01.T01 MTR_3g007410 30.634 284 140 13 53 317 136 381 1.24e-24 103
MsG0780038489.01.T01 MTR_4g108820 36.652 221 92 11 64 270 107 293 1.54e-24 102
MsG0780038489.01.T01 MTR_8g101580 32.130 277 130 14 62 320 136 372 1.74e-24 103
MsG0780038489.01.T01 MTR_4g061340 35.526 228 94 9 65 267 118 317 1.77e-24 103
MsG0780038489.01.T01 MTR_3g007360 30.742 283 139 13 54 317 137 381 5.50e-24 102
MsG0780038489.01.T01 MTR_3g010970 32.646 291 135 14 64 344 152 391 8.58e-24 101
MsG0780038489.01.T01 MTR_4g024910 40.141 142 78 3 202 343 130 264 1.05e-23 100
MsG0780038489.01.T01 MTR_4g024910 42.991 107 48 4 23 128 47 141 1.40e-13 71.2
MsG0780038489.01.T01 MTR_3g006640 28.438 320 159 12 58 345 12 293 1.21e-23 99.4
MsG0780038489.01.T01 MTR_7g407070 31.834 289 141 13 41 294 102 369 2.02e-23 100
MsG0780038489.01.T01 MTR_3g010390 32.616 279 129 15 45 301 120 361 4.86e-23 99.4
MsG0780038489.01.T01 MTR_3g007330 30.314 287 139 13 63 327 134 381 5.31e-23 99.0
MsG0780038489.01.T01 MTR_0044s0300 31.208 298 143 16 65 344 136 389 5.57e-23 99.0
MsG0780038489.01.T01 MTR_5g011200 31.098 328 164 17 36 343 88 373 7.08e-23 98.6
MsG0780038489.01.T01 MTR_6g021880 28.094 299 163 11 63 344 118 381 8.51e-23 98.2
MsG0780038489.01.T01 MTR_4g031770 28.525 305 160 11 64 344 98 368 1.80e-22 97.4
MsG0780038489.01.T01 MTR_5g057710 32.766 235 120 12 45 267 124 332 1.98e-22 97.4
MsG0780038489.01.T01 MTR_3g030320 32.500 240 120 10 56 282 34 244 3.01e-22 95.5
MsG0780038489.01.T01 MTR_5g046300 28.041 296 150 15 67 344 100 350 3.27e-22 96.3
MsG0780038489.01.T01 MTR_5g046290 28.041 296 150 15 67 344 100 350 3.27e-22 96.3
MsG0780038489.01.T01 MTR_3g024130 30.935 278 130 11 62 317 56 293 3.68e-22 95.5
MsG0780038489.01.T01 MTR_3g007270 32.727 220 104 9 65 266 151 344 4.00e-22 96.7
MsG0780038489.01.T01 MTR_3g009240 33.478 230 103 12 57 267 120 318 5.08e-22 96.3
MsG0780038489.01.T01 MTR_5g046280 29.054 296 147 16 67 344 3 253 5.78e-22 94.0
MsG0780038489.01.T01 MTR_3g011020 27.500 280 127 13 63 321 129 353 6.71e-22 95.9
MsG0780038489.01.T01 MTR_3g013740 30.837 227 111 10 62 268 145 345 7.48e-22 95.9
MsG0780038489.01.T01 MTR_2g078900 30.038 263 131 12 55 302 114 338 8.17e-22 95.1
MsG0780038489.01.T01 MTR_3g030350 29.431 299 154 12 65 344 130 390 1.05e-21 95.5
MsG0780038489.01.T01 MTR_3g436150 32.759 232 110 11 59 268 127 334 1.23e-21 95.1
MsG0780038489.01.T01 MTR_3g024150 33.058 242 126 11 67 300 139 352 1.57e-21 94.7
MsG0780038489.01.T01 MTR_6g065980 28.571 301 160 14 60 344 97 358 2.27e-21 94.0
MsG0780038489.01.T01 MTR_4g024870 33.198 247 126 14 51 269 128 363 2.37e-21 94.7
MsG0780038489.01.T01 MTR_0354s0030 48.980 98 48 2 250 346 1 97 7.07e-21 86.3
MsG0780038489.01.T01 MTR_7g445580 44.545 110 52 2 214 323 46 146 8.04e-21 87.8
MsG0780038489.01.T01 MTR_3g010520 29.841 315 160 15 41 344 95 359 1.20e-20 92.0
MsG0780038489.01.T01 MTR_6g053240 30.350 257 130 13 62 301 122 346 1.38e-20 92.4
MsG0780038489.01.T01 MTR_7g056373 84.615 52 7 1 1 51 74 125 1.66e-20 86.3
MsG0780038489.01.T01 MTR_1g055375 29.412 306 147 15 64 344 105 366 1.93e-20 91.7
MsG0780038489.01.T01 MTR_3g009300 30.924 249 119 12 63 288 96 314 3.06e-20 90.9
MsG0780038489.01.T01 MTR_5g057790 31.799 239 121 13 57 281 134 344 3.51e-20 90.9
MsG0780038489.01.T01 MTR_3g009260 31.338 284 148 12 62 325 128 384 4.30e-20 90.9
MsG0780038489.01.T01 MTR_3g010920 29.352 293 144 12 64 344 140 381 6.48e-20 90.1
MsG0780038489.01.T01 MTR_4g107820 31.336 217 105 8 64 265 130 317 6.50e-20 90.1
MsG0780038489.01.T01 MTR_4g107780 31.336 217 105 8 64 265 130 317 6.50e-20 90.1
MsG0780038489.01.T01 MTR_6g004210 29.712 313 162 14 64 344 129 415 6.85e-20 90.5
MsG0780038489.01.T01 MTR_3g010870 28.840 319 171 16 41 344 107 384 7.25e-20 90.1
MsG0780038489.01.T01 MTR_4g107780 31.336 217 105 8 64 265 130 317 7.46e-20 90.1
MsG0780038489.01.T01 MTR_7g089830 37.838 148 74 5 167 312 7 138 8.58e-20 85.1
MsG0780038489.01.T01 MTR_4g107820 31.336 217 105 8 64 265 130 317 8.61e-20 90.1
MsG0780038489.01.T01 MTR_3g024110 32.227 211 104 10 65 267 200 379 9.50e-20 90.1
MsG0780038489.01.T01 MTR_3g006670 28.400 250 127 10 62 288 142 362 1.05e-19 89.7
MsG0780038489.01.T01 MTR_3g011100 29.126 309 163 12 58 344 327 601 1.11e-19 90.5
MsG0780038489.01.T01 MTR_7g066830 49.474 95 39 4 60 150 91 180 1.27e-19 85.9
MsG0780038489.01.T01 MTR_3g030330 29.693 293 155 13 64 344 118 371 2.44e-19 88.2
MsG0780038489.01.T01 MTR_1004s0010 29.386 228 126 7 67 289 119 316 2.76e-19 88.2
MsG0780038489.01.T01 MTR_1g054725 26.646 319 151 16 58 344 108 375 2.89e-19 88.2
MsG0780038489.01.T01 MTR_3g024040 26.910 301 155 12 62 344 119 372 3.04e-19 88.2
MsG0780038489.01.T01 MTR_3g010590 32.420 219 103 9 68 273 141 327 3.65e-19 88.2
MsG0780038489.01.T01 MTR_3g011060 26.132 287 150 11 63 327 129 375 5.03e-19 87.8
MsG0780038489.01.T01 MTR_0760s0010 29.386 228 126 7 67 289 149 346 5.29e-19 87.4
MsG0780038489.01.T01 MTR_3g006500 27.609 297 162 13 55 344 119 369 5.64e-19 87.4
MsG0780038489.01.T01 MTR_6g053260 28.571 259 131 11 60 301 429 650 6.43e-19 88.6
MsG0780038489.01.T01 MTR_2g021210 30.717 293 147 14 64 344 176 424 9.87e-19 87.0
MsG0780038489.01.T01 MTR_5g009060 28.571 287 139 13 54 317 134 377 1.02e-18 87.0
MsG0780038489.01.T01 MTR_3g009310 32.273 220 104 10 63 266 137 327 1.23e-18 86.7
MsG0780038489.01.T01 MTR_3g006530 29.452 292 154 13 65 344 145 396 1.77e-18 86.3
MsG0780038489.01.T01 MTR_5g007610 28.571 238 115 11 58 267 128 338 1.97e-18 85.9
MsG0780038489.01.T01 MTR_1g115160 27.397 292 157 13 65 344 118 366 2.53e-18 85.5
MsG0780038489.01.T01 MTR_3g036335 28.197 305 143 15 65 344 141 394 3.32e-18 85.5
MsG0780038489.01.T01 MTR_3g030250 27.972 286 154 14 67 344 138 379 3.47e-18 85.1
MsG0780038489.01.T01 MTR_3g010620 30.290 241 130 8 63 301 137 341 4.27e-18 85.1
MsG0780038489.01.T01 MTR_6g048140 28.383 303 158 13 13 301 97 354 4.31e-18 85.1
MsG0780038489.01.T01 MTR_3g083640 29.452 292 146 13 67 344 157 402 5.88e-18 84.7
MsG0780038489.01.T01 MTR_3g083660 28.462 260 139 10 97 346 60 282 7.08e-18 82.8
MsG0780038489.01.T01 MTR_7g060930 51.471 68 33 0 186 253 11 78 7.11e-18 77.8
MsG0780038489.01.T01 MTR_7g062070 40.517 116 61 3 205 317 76 186 8.40e-18 80.9
MsG0780038489.01.T01 MTR_3g007300 29.200 250 136 10 24 267 90 304 9.43e-18 83.6
MsG0780038489.01.T01 MTR_8g030660 32.338 201 76 8 19 175 83 267 1.17e-17 82.0
MsG0780038489.01.T01 MTR_2g021252 28.617 311 145 15 54 344 131 384 1.35e-17 83.6
MsG0780038489.01.T01 MTR_3g006570 27.419 310 158 13 59 344 110 376 1.51e-17 83.2
MsG0780038489.01.T01 MTR_1g097370 30.631 222 119 9 114 321 136 336 1.66e-17 83.6
MsG0780038489.01.T01 MTR_6g048150 45.000 100 43 3 247 341 13 105 1.87e-17 78.2
MsG0780038489.01.T01 MTR_4g053470 28.758 306 130 11 13 304 68 299 1.97e-17 82.4
MsG0780038489.01.T01 MTR_7g056723 33.784 148 81 4 48 187 20 158 2.10e-17 79.3
MsG0780038489.01.T01 MTR_6g007150 28.155 309 162 14 61 344 64 337 2.57e-17 82.0
MsG0780038489.01.T01 MTR_3g007390 35.119 168 69 6 114 266 4 146 4.89e-17 79.0
MsG0780038489.01.T01 MTR_6g027890 30.573 314 143 16 64 344 53 324 8.59e-17 80.5
MsG0780038489.01.T01 MTR_1g113900 30.085 236 129 8 113 344 42 245 2.36e-16 77.8
MsG0780038489.01.T01 MTR_4g006840 32.468 154 75 4 62 210 90 219 2.76e-16 77.4
MsG0780038489.01.T01 MTR_4g132560 31.638 177 90 4 110 270 36 197 2.86e-16 77.8
MsG0780038489.01.T01 MTR_6g013270 26.333 300 162 13 65 344 132 392 3.07e-16 79.7
MsG0780038489.01.T01 MTR_3g055070 37.288 118 54 4 201 317 1 99 3.08e-16 75.5
MsG0780038489.01.T01 MTR_2g078850 30.924 249 123 14 65 302 128 338 3.88e-16 79.0
MsG0780038489.01.T01 MTR_6g027910 31.169 231 109 8 60 265 105 310 4.02e-16 79.0
MsG0780038489.01.T01 MTR_1g016960 43.810 105 54 3 242 343 152 254 5.08e-16 77.4
MsG0780038489.01.T01 MTR_1g016960 41.935 93 36 4 94 179 72 153 8.78e-11 62.0
MsG0780038489.01.T01 MTR_2g435950 30.712 267 126 13 33 276 14 244 5.53e-16 77.8
MsG0780038489.01.T01 MTR_3g030310 28.477 302 157 16 65 344 126 390 1.11e-15 77.8
MsG0780038489.01.T01 MTR_1g058190 26.316 247 139 9 113 343 150 369 1.73e-15 77.0
MsG0780038489.01.T01 MTR_6g048120 26.246 301 168 13 66 344 139 407 1.95e-15 77.4
MsG0780038489.01.T01 MTR_1g097510 28.947 190 94 7 88 274 61 212 2.40e-15 75.9
MsG0780038489.01.T01 MTR_4g030880 32.990 194 83 9 131 323 48 195 3.20e-15 77.0
MsG0780038489.01.T01 MTR_3g023940 29.667 300 157 18 54 344 129 383 1.08e-14 74.7
MsG0780038489.01.T01 MTR_7g021580 44.444 99 43 4 246 344 214 300 1.48e-14 73.6
MsG0780038489.01.T01 MTR_5g057020 30.667 225 114 11 63 280 139 328 1.66e-14 73.9
MsG0780038489.01.T01 MTR_1g055065 27.419 310 154 16 65 344 19 287 2.06e-14 73.2
MsG0780038489.01.T01 MTR_3g096280 28.179 291 141 13 65 344 109 342 6.78e-14 72.0
MsG0780038489.01.T01 MTR_4g133170 25.532 235 121 11 61 266 81 290 8.06e-14 72.4
MsG0780038489.01.T01 MTR_5g046260 29.524 210 98 10 91 289 104 274 9.72e-14 71.2
MsG0780038489.01.T01 MTR_8g062660 29.461 241 98 11 54 259 106 309 1.03e-13 72.4
MsG0780038489.01.T01 MTR_1g046600 50.000 76 35 2 240 314 233 306 2.26e-13 70.1
MsG0780038489.01.T01 MTR_1g046600 39.130 92 46 1 46 127 132 223 2.44e-12 67.0
MsG0780038489.01.T01 MTR_7g056727 40.000 135 50 7 15 135 24 141 2.43e-13 68.9
MsG0780038489.01.T01 MTR_2g021050 25.000 296 146 13 57 327 89 333 2.90e-13 70.5
MsG0780038489.01.T01 MTR_3g030240 33.125 160 76 7 112 269 183 313 3.16e-13 70.5
MsG0780038489.01.T01 MTR_1g056280 32.335 167 72 8 121 267 2 147 3.51e-13 68.2
MsG0780038489.01.T01 MTR_7g022580 38.614 101 54 3 23 117 14 112 3.52e-13 67.4
MsG0780038489.01.T01 MTR_7g038710 42.857 91 50 2 256 345 59 148 4.52e-13 66.6
MsG0780038489.01.T01 MTR_7g058660 35.135 111 65 3 234 340 103 210 5.06e-13 67.8
MsG0780038489.01.T01 MTR_7g058660 44.706 85 38 2 47 125 2 83 1.74e-12 66.2
MsG0780038489.01.T01 MTR_1g114650 28.426 197 91 7 116 301 24 181 5.66e-13 68.2
MsG0780038489.01.T01 MTR_1g100763 26.441 295 138 15 18 303 57 281 6.21e-13 68.9
MsG0780038489.01.T01 MTR_2g028130 26.316 228 128 9 64 266 104 316 2.14e-12 68.2
MsG0780038489.01.T01 MTR_3g010430 27.419 310 143 16 67 344 133 392 3.45e-12 67.4
MsG0780038489.01.T01 MTR_1g055055 29.032 248 136 12 25 270 89 298 3.98e-12 67.0
MsG0780038489.01.T01 MTR_3g034130 29.915 234 118 11 64 274 104 314 7.66e-12 66.2
MsG0780038489.01.T01 MTR_3g009250 35.938 128 58 4 65 181 131 245 1.17e-11 64.3
MsG0780038489.01.T01 MTR_2g025420 24.036 337 172 14 54 344 94 392 1.37e-11 65.5
MsG0780038489.01.T01 MTR_1g097520 29.268 164 80 7 64 215 5 144 1.67e-11 62.4
MsG0780038489.01.T01 MTR_2g025960 24.066 241 136 7 64 273 3 227 1.73e-11 64.7
MsG0780038489.01.T01 MTR_7g445570 39.759 83 39 2 109 180 7 89 1.85e-11 60.1
MsG0780038489.01.T01 MTR_5g070130 28.509 228 128 10 64 274 105 314 1.91e-11 65.1
MsG0780038489.01.T01 MTR_7g056560 56.364 55 23 1 167 220 127 181 2.96e-11 62.8
MsG0780038489.01.T01 MTR_8g054320 30.601 183 102 7 90 267 77 239 3.16e-11 63.9
MsG0780038489.01.T01 MTR_3g009290 35.032 157 70 9 66 209 121 258 3.51e-11 63.2
MsG0780038489.01.T01 MTR_2g031680 22.408 299 170 9 56 328 81 343 6.08e-11 63.5
MsG0780038489.01.T01 MTR_2g043420 47.297 74 21 3 7 79 83 139 7.46e-11 60.5
MsG0780038489.01.T01 MTR_5g070088 28.319 226 108 10 66 267 121 316 7.63e-11 63.2
MsG0780038489.01.T01 MTR_3g083010 24.561 342 183 16 43 344 87 393 9.87e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038489.01.T01 AT3G23880 28.906 256 131 10 56 289 104 330 4.94e-12 66.6

Find 77 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGAACAATGGGAAATTT+TGG 0.137851 7:+47629973 None:intergenic
CAGGATCTTCAAATTTATTA+TGG 0.220044 7:-47629610 MsG0780038489.01.T01:CDS
AACATGCAGTTCTCTATAAT+TGG 0.240537 7:-47629489 MsG0780038489.01.T01:CDS
TCATCAACCATAAAACAAAA+TGG 0.246199 7:+47629683 None:intergenic
TCGACCCTTCCATCCGATTT+AGG 0.274445 7:-47630314 MsG0780038489.01.T01:CDS
TCTATAATTGGAGAGATAAA+AGG 0.283817 7:-47629477 MsG0780038489.01.T01:CDS
CAAATTTATTATGGCTTTAG+TGG 0.304884 7:-47629601 MsG0780038489.01.T01:CDS
AAAACTCTTGCTTCCGTCTC+TGG 0.311141 7:-47630158 MsG0780038489.01.T01:CDS
GACTATTTCAAGTTAACATT+TGG 0.311215 7:-47630090 MsG0780038489.01.T01:CDS
TCGAAGGGTACGATGGTTAA+TGG 0.320775 7:+47630333 None:intergenic
TCCAGCTGTTACTGTATTGA+TGG 0.332731 7:-47629740 MsG0780038489.01.T01:CDS
TATTTCAAATGACACTTATA+AGG 0.334285 7:-47630061 MsG0780038489.01.T01:CDS
TCAGTTTGAGTGATAATGTT+TGG 0.361255 7:-47630005 MsG0780038489.01.T01:CDS
TCTGTTTGCTCAGTTATTCT+CGG 0.365676 7:-47630197 MsG0780038489.01.T01:CDS
TGTCATCCATATGTCAATAA+TGG 0.380816 7:-47629931 MsG0780038489.01.T01:CDS
AATATCATTCCAATCATATT+CGG 0.387045 7:+47629861 None:intergenic
ATGTCAGTGGCACTATTAAT+TGG 0.403368 7:-47629903 MsG0780038489.01.T01:CDS
CTGTTTGCTCAGTTATTCTC+GGG 0.404477 7:-47630196 MsG0780038489.01.T01:CDS
AAAATAAGACCGAATATGAT+TGG 0.414146 7:-47629870 MsG0780038489.01.T01:CDS
TCGAGCAAACGAACGGGAAA+TGG 0.419254 7:+47630360 None:intergenic
ACAGTAACAGCTGGATCAAC+AGG 0.419644 7:+47629748 None:intergenic
TTATGGCTTTAGTGGTTCAC+TGG 0.427288 7:-47629593 MsG0780038489.01.T01:CDS
TACACACCATTATTGACATA+TGG 0.437007 7:+47629925 None:intergenic
CAAACAGATCAATCCGTTGC+AGG 0.438157 7:+47630212 None:intergenic
GAGTGATGAAACACTCATAA+TGG 0.441472 7:-47629527 MsG0780038489.01.T01:CDS
AATGGAAGACACTCCTAAAT+CGG 0.442985 7:+47630301 None:intergenic
TCAATATCAAAAGGAACAAT+GGG 0.452668 7:+47629964 None:intergenic
ATGTTACTCAATCGGTAGTA+AGG 0.458527 7:+47630258 None:intergenic
TAAAACAAAATGGGTCTCCT+TGG 0.470259 7:+47629693 None:intergenic
CTCAATATCAAAAGGAACAA+TGG 0.477234 7:+47629963 None:intergenic
CATATCGTTGGTTCCTGCAA+CGG 0.482093 7:-47630225 MsG0780038489.01.T01:CDS
CATCAACCATAAAACAAAAT+GGG 0.484450 7:+47629684 None:intergenic
AACAATCCATGTTACTCAAT+CGG 0.485559 7:+47630250 None:intergenic
CGACTAGCCTCAATATCAAA+AGG 0.488261 7:+47629955 None:intergenic
ATGGATTGTTATCATATCGT+TGG 0.490158 7:-47630237 MsG0780038489.01.T01:CDS
CTATAATTGGAGAGATAAAA+GGG 0.496604 7:-47629476 MsG0780038489.01.T01:CDS
CGTCAGCAATGGCATTGTAA+TGG 0.509415 7:+47630283 None:intergenic
ACCTAGCAATGGTTTCAAAC+CGG 0.510211 7:-47630419 None:intergenic
GGAGCCTCGAGCAAACGAAC+GGG 0.523571 7:+47630354 None:intergenic
TCCATCAATACAGTAACAGC+TGG 0.525188 7:+47629739 None:intergenic
AAATGACACTTATAAGGTAG+TGG 0.525357 7:-47630055 MsG0780038489.01.T01:CDS
AAGAGAAACTTACTTTCAAG+AGG 0.530697 7:+47629378 None:intergenic
AAATCGGATGGAAGGGTCGA+AGG 0.533039 7:+47630317 None:intergenic
CTTGAGGCGGCCGCAAATGT+TGG 0.533139 7:+47629788 None:intergenic
TAAGCTTTCAACATAACCCT+TGG 0.534116 7:+47629408 None:intergenic
CCGAGACGTACCAACATTTG+CGG 0.534414 7:-47629798 MsG0780038489.01.T01:CDS
TTTGACCTCGGTGGAAGAGA+AGG 0.534429 7:+47630032 None:intergenic
TTATGGTTGATGATGGAGTA+CGG 0.537827 7:-47629673 MsG0780038489.01.T01:CDS
AGTACGGAGTTCAAGAGTCT+TGG 0.540497 7:-47629657 MsG0780038489.01.T01:CDS
CAACATTTGCGGCCGCCTCA+AGG 0.540896 7:-47629787 MsG0780038489.01.T01:CDS
TGGAGCCTCGAGCAAACGAA+CGG 0.541972 7:+47630353 None:intergenic
AATATTGTGGTTTCATACCA+AGG 0.547548 7:-47629425 MsG0780038489.01.T01:CDS
TTGTGGCTGGGTTCCAGAGA+CGG 0.550221 7:+47630145 None:intergenic
ACACTCCTAAATCGGATGGA+AGG 0.550660 7:+47630309 None:intergenic
CACTCCTAAATCGGATGGAA+GGG 0.561398 7:+47630310 None:intergenic
GTCTACATCTGAAGACGAGT+TGG 0.567089 7:-47630397 MsG0780038489.01.T01:CDS
GAAGACACTCCTAAATCGGA+TGG 0.569073 7:+47630305 None:intergenic
ATATTGTGGTTTCATACCAA+GGG 0.570331 7:-47629424 MsG0780038489.01.T01:CDS
ACTCGTCTTCAGATGTAGAC+CGG 0.571698 7:+47630400 None:intergenic
CCGCAAATGTTGGTACGTCT+CGG 0.574291 7:+47629798 None:intergenic
CAGTCGACAATGAAATATTG+TGG 0.587587 7:-47629438 MsG0780038489.01.T01:CDS
GTGTTTCATCACTCTCAGAA+AGG 0.602729 7:+47629536 None:intergenic
AATCGGATGGAAGGGTCGAA+GGG 0.608894 7:+47630318 None:intergenic
ATTTCCCGTTCGTTTGCTCG+AGG 0.611840 7:-47630358 MsG0780038489.01.T01:CDS
TCACTCTCAGAAAGGTACAA+TGG 0.615945 7:+47629544 None:intergenic
GGAAGGGTCGAAGGGTACGA+TGG 0.617010 7:+47630326 None:intergenic
CAAAATGGGTCTCCTTGGAA+CGG 0.626500 7:+47629698 None:intergenic
GTAGTAAGGATCGTCAGCAA+TGG 0.630036 7:+47630272 None:intergenic
TTACTACCGATTGAGTAACA+TGG 0.634269 7:-47630256 MsG0780038489.01.T01:CDS
TGTTTGCTCAGTTATTCTCG+GGG 0.644426 7:-47630195 MsG0780038489.01.T01:CDS
CGGTAGTCAGATCAAGTGAG+AGG 0.644779 7:+47629818 None:intergenic
ACTTCAACAAATCCTTGAGG+CGG 0.681533 7:+47629775 None:intergenic
GTTTGCTCAGTTATTCTCGG+GGG 0.692246 7:-47630194 MsG0780038489.01.T01:CDS
AATAATGGTGTGTATGTCAG+TGG 0.709344 7:-47629916 MsG0780038489.01.T01:CDS
GTAACAGCTGGATCAACAGG+TGG 0.744348 7:+47629751 None:intergenic
GGTACTTCAACAAATCCTTG+AGG 0.746966 7:+47629772 None:intergenic
AGTGGCCTTCTCTTCCACCG+AGG 0.760099 7:-47630037 MsG0780038489.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCATTATCTGAAAAATT+AGG - Chr7:47629681-47629700 MsG0780038489.01.T01:CDS 15.0%
!! AATATCATTCCAATCATATT+CGG + Chr7:47629946-47629965 None:intergenic 20.0%
!! TATTTCAAATGACACTTATA+AGG - Chr7:47629743-47629762 MsG0780038489.01.T01:CDS 20.0%
!!! TTTTTCAGATAATGATTTTG+TGG + Chr7:47629679-47629698 None:intergenic 20.0%
! AAAATAAGACCGAATATGAT+TGG - Chr7:47629934-47629953 MsG0780038489.01.T01:CDS 25.0%
! CAGGATCTTCAAATTTATTA+TGG - Chr7:47630194-47630213 MsG0780038489.01.T01:CDS 25.0%
! CATCAACCATAAAACAAAAT+GGG + Chr7:47630123-47630142 None:intergenic 25.0%
! CTATAATTGGAGAGATAAAA+GGG - Chr7:47630328-47630347 MsG0780038489.01.T01:CDS 25.0%
! TCAATATCAAAAGGAACAAT+GGG + Chr7:47629843-47629862 None:intergenic 25.0%
! TCATCAACCATAAAACAAAA+TGG + Chr7:47630124-47630143 None:intergenic 25.0%
! TCTATAATTGGAGAGATAAA+AGG - Chr7:47630327-47630346 MsG0780038489.01.T01:CDS 25.0%
!!! ATATTCGGTCTTATTTTGAA+TGG + Chr7:47629931-47629950 None:intergenic 25.0%
!!! ATTCCTCAAAATTAGTTTTC+AGG - Chr7:47630175-47630194 MsG0780038489.01.T01:CDS 25.0%
!!! CAAATTTATTATGGCTTTAG+TGG - Chr7:47630203-47630222 MsG0780038489.01.T01:CDS 25.0%
!!! GACTATTTCAAGTTAACATT+TGG - Chr7:47629714-47629733 MsG0780038489.01.T01:CDS 25.0%
!!! TTTTGTTTTATGGTTGATGA+TGG - Chr7:47630124-47630143 MsG0780038489.01.T01:CDS 25.0%
AAATGACACTTATAAGGTAG+TGG - Chr7:47629749-47629768 MsG0780038489.01.T01:CDS 30.0%
AACAATCCATGTTACTCAAT+CGG + Chr7:47629557-47629576 None:intergenic 30.0%
AACATGCAGTTCTCTATAAT+TGG - Chr7:47630315-47630334 MsG0780038489.01.T01:CDS 30.0%
AATATTGTGGTTTCATACCA+AGG - Chr7:47630379-47630398 MsG0780038489.01.T01:CDS 30.0%
ATATTGTGGTTTCATACCAA+GGG - Chr7:47630380-47630399 MsG0780038489.01.T01:CDS 30.0%
CTCAATATCAAAAGGAACAA+TGG + Chr7:47629844-47629863 None:intergenic 30.0%
TACACACCATTATTGACATA+TGG + Chr7:47629882-47629901 None:intergenic 30.0%
TGTCATCCATATGTCAATAA+TGG - Chr7:47629873-47629892 MsG0780038489.01.T01:CDS 30.0%
! AAAGGAACAATGGGAAATTT+TGG + Chr7:47629834-47629853 None:intergenic 30.0%
! ATGGATTGTTATCATATCGT+TGG - Chr7:47629567-47629586 MsG0780038489.01.T01:CDS 30.0%
! CATTGTTCCTTTTGATATTG+AGG - Chr7:47629842-47629861 MsG0780038489.01.T01:CDS 30.0%
! GATCCTGAAAACTAATTTTG+AGG + Chr7:47630181-47630200 None:intergenic 30.0%
! TCAGTTTGAGTGATAATGTT+TGG - Chr7:47629799-47629818 MsG0780038489.01.T01:CDS 30.0%
!! CAAACTGAAAATTTTGACCT+CGG + Chr7:47629787-47629806 None:intergenic 30.0%
AATAATGGTGTGTATGTCAG+TGG - Chr7:47629888-47629907 MsG0780038489.01.T01:CDS 35.0%
AATGGAAGACACTCCTAAAT+CGG + Chr7:47629506-47629525 None:intergenic 35.0%
ATGTCAGTGGCACTATTAAT+TGG - Chr7:47629901-47629920 MsG0780038489.01.T01:CDS 35.0%
ATGTTACTCAATCGGTAGTA+AGG + Chr7:47629549-47629568 None:intergenic 35.0%
CAGTCGACAATGAAATATTG+TGG - Chr7:47630366-47630385 MsG0780038489.01.T01:CDS 35.0%
GAGTGATGAAACACTCATAA+TGG - Chr7:47630277-47630296 MsG0780038489.01.T01:CDS 35.0%
TAAAACAAAATGGGTCTCCT+TGG + Chr7:47630114-47630133 None:intergenic 35.0%
TAAGCTTTCAACATAACCCT+TGG + Chr7:47630399-47630418 None:intergenic 35.0%
TCTGTTTGCTCAGTTATTCT+CGG - Chr7:47629607-47629626 MsG0780038489.01.T01:CDS 35.0%
! CAGATAATGATTTTGTGGCT+GGG + Chr7:47629674-47629693 None:intergenic 35.0%
! TCAGATAATGATTTTGTGGC+TGG + Chr7:47629675-47629694 None:intergenic 35.0%
! TTACTACCGATTGAGTAACA+TGG - Chr7:47629548-47629567 MsG0780038489.01.T01:CDS 35.0%
!! TTATGGTTGATGATGGAGTA+CGG - Chr7:47630131-47630150 MsG0780038489.01.T01:CDS 35.0%
!!! AGGAGACCCATTTTGTTTTA+TGG - Chr7:47630114-47630133 MsG0780038489.01.T01:CDS 35.0%
ACTTCAACAAATCCTTGAGG+CGG + Chr7:47630032-47630051 None:intergenic 40.0%
CTGTTTGCTCAGTTATTCTC+GGG - Chr7:47629608-47629627 MsG0780038489.01.T01:CDS 40.0%
GGTACTTCAACAAATCCTTG+AGG + Chr7:47630035-47630054 None:intergenic 40.0%
GTGTTTCATCACTCTCAGAA+AGG + Chr7:47630271-47630290 None:intergenic 40.0%
TCCAGCTGTTACTGTATTGA+TGG - Chr7:47630064-47630083 MsG0780038489.01.T01:CDS 40.0%
TCCATCAATACAGTAACAGC+TGG + Chr7:47630068-47630087 None:intergenic 40.0%
TGTTTGCTCAGTTATTCTCG+GGG - Chr7:47629609-47629628 MsG0780038489.01.T01:CDS 40.0%
! ATGTTTTTCTCACCGTTCCA+AGG - Chr7:47630094-47630113 MsG0780038489.01.T01:CDS 40.0%
! TCACTCTCAGAAAGGTACAA+TGG + Chr7:47630263-47630282 None:intergenic 40.0%
!! ACTGAAAATTTTGACCTCGG+TGG + Chr7:47629784-47629803 None:intergenic 40.0%
!! CGACTAGCCTCAATATCAAA+AGG + Chr7:47629852-47629871 None:intergenic 40.0%
!! TTATGGCTTTAGTGGTTCAC+TGG - Chr7:47630211-47630230 MsG0780038489.01.T01:CDS 40.0%
AAAACTCTTGCTTCCGTCTC+TGG - Chr7:47629646-47629665 MsG0780038489.01.T01:CDS 45.0%
ACACTCCTAAATCGGATGGA+AGG + Chr7:47629498-47629517 None:intergenic 45.0%
ACAGTAACAGCTGGATCAAC+AGG + Chr7:47630059-47630078 None:intergenic 45.0%
ACTCGTCTTCAGATGTAGAC+CGG + Chr7:47629407-47629426 None:intergenic 45.0%
AGTACGGAGTTCAAGAGTCT+TGG - Chr7:47630147-47630166 MsG0780038489.01.T01:CDS 45.0%
CAAAATGGGTCTCCTTGGAA+CGG + Chr7:47630109-47630128 None:intergenic 45.0%
CAAACAGATCAATCCGTTGC+AGG + Chr7:47629595-47629614 None:intergenic 45.0%
CACTCCTAAATCGGATGGAA+GGG + Chr7:47629497-47629516 None:intergenic 45.0%
CGTCAGCAATGGCATTGTAA+TGG + Chr7:47629524-47629543 None:intergenic 45.0%
GAAGACACTCCTAAATCGGA+TGG + Chr7:47629502-47629521 None:intergenic 45.0%
GTAGTAAGGATCGTCAGCAA+TGG + Chr7:47629535-47629554 None:intergenic 45.0%
GTCTACATCTGAAGACGAGT+TGG - Chr7:47629407-47629426 MsG0780038489.01.T01:CDS 45.0%
GTTTGCTCAGTTATTCTCGG+GGG - Chr7:47629610-47629629 MsG0780038489.01.T01:CDS 45.0%
! TCGAAGGGTACGATGGTTAA+TGG + Chr7:47629474-47629493 None:intergenic 45.0%
!! CATATCGTTGGTTCCTGCAA+CGG - Chr7:47629579-47629598 MsG0780038489.01.T01:CDS 45.0%
AAATCGGATGGAAGGGTCGA+AGG + Chr7:47629490-47629509 None:intergenic 50.0%
AATCGGATGGAAGGGTCGAA+GGG + Chr7:47629489-47629508 None:intergenic 50.0%
ATTTCCCGTTCGTTTGCTCG+AGG - Chr7:47629446-47629465 MsG0780038489.01.T01:CDS 50.0%
CCGAGACGTACCAACATTTG+CGG - Chr7:47630006-47630025 MsG0780038489.01.T01:CDS 50.0%
CCGCAAATGTTGGTACGTCT+CGG + Chr7:47630009-47630028 None:intergenic 50.0%
CGGTAGTCAGATCAAGTGAG+AGG + Chr7:47629989-47630008 None:intergenic 50.0%
GTAACAGCTGGATCAACAGG+TGG + Chr7:47630056-47630075 None:intergenic 50.0%
TCGACCCTTCCATCCGATTT+AGG - Chr7:47629490-47629509 MsG0780038489.01.T01:CDS 50.0%
TCGAGCAAACGAACGGGAAA+TGG + Chr7:47629447-47629466 None:intergenic 50.0%
TTTGACCTCGGTGGAAGAGA+AGG + Chr7:47629775-47629794 None:intergenic 50.0%
TGGAGCCTCGAGCAAACGAA+CGG + Chr7:47629454-47629473 None:intergenic 55.0%
TTGTGGCTGGGTTCCAGAGA+CGG + Chr7:47629662-47629681 None:intergenic 55.0%
AGTGGCCTTCTCTTCCACCG+AGG - Chr7:47629767-47629786 MsG0780038489.01.T01:CDS 60.0%
CAACATTTGCGGCCGCCTCA+AGG - Chr7:47630017-47630036 MsG0780038489.01.T01:CDS 60.0%
CTTGAGGCGGCCGCAAATGT+TGG + Chr7:47630019-47630038 None:intergenic 60.0%
GGAGCCTCGAGCAAACGAAC+GGG + Chr7:47629453-47629472 None:intergenic 60.0%
! GGAAGGGTCGAAGGGTACGA+TGG + Chr7:47629481-47629500 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 47629393 47630433 47629393 ID=MsG0780038489.01;Name=MsG0780038489.01
Chr7 mRNA 47629393 47630433 47629393 ID=MsG0780038489.01.T01;Parent=MsG0780038489.01;Name=MsG0780038489.01.T01;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|346
Chr7 exon 47629393 47630433 47629393 ID=MsG0780038489.01.T01:exon:5001;Parent=MsG0780038489.01.T01
Chr7 CDS 47629393 47630433 47629393 ID=MsG0780038489.01.T01:cds;Parent=MsG0780038489.01.T01
Gene Sequence

>MsG0780038489.01.T01

ATGGTTTCAAACCGGTCTACATCTGAAGACGAGTTGGATTGCAGTGTCGTACCATTTCCCGTTCGTTTGCTCGAGGCTCCATTAACCATCGTACCCTTCGACCCTTCCATCCGATTTAGGAGTGTCTTCCATTACAATGCCATTGCTGACGATCCTTACTACCGATTGAGTAACATGGATTGTTATCATATCGTTGGTTCCTGCAACGGATTGATCTGTTTGCTCAGTTATTCTCGGGGGATCACTGAGCTTGAAAACTCTTGCTTCCGTCTCTGGAACCCAGCCACAAAATCATTATCTGAAAAATTAGGCTATTCAACTGACTATTTCAAGTTAACATTTGGATATGATATTTCAAATGACACTTATAAGGTAGTGGCCTTCTCTTCCACCGAGGTCAAAATTTTCAGTTTGAGTGATAATGTTTGGAGAGATATTCCAAAATTTCCCATTGTTCCTTTTGATATTGAGGCTAGTCGTTGTCATCCATATGTCAATAATGGTGTGTATGTCAGTGGCACTATTAATTGGTTGACCATTCAAAATAAGACCGAATATGATTGGAATGATATTTCAATCGATCAATTTCTCATCCTCTCACTTGATCTGACTACCGAGACGTACCAACATTTGCGGCCGCCTCAAGGATTTGTTGAAGTACCACCTGTTGATCCAGCTGTTACTGTATTGATGGATTGTCTATGTTTTTCTCACCGTTCCAAGGAGACCCATTTTGTTTTATGGTTGATGATGGAGTACGGAGTTCAAGAGTCTTGGACTCAATTCCTCAAAATTAGTTTTCAGGATCTTCAAATTTATTATGGCTTTAGTGGTTCACTGGAATATGATTCTCAGTTGTTCTTGTTTCCATTGTACCTTTCTGAGAGTGATGAAACACTCATAATGGCAAGTTGTCAAGAAAAACATGCAGTTCTCTATAATTGGAGAGATAAAAGGGTAGAGCAAATTATATCAGTCGACAATGAAATATTGTGGTTTCATACCAAGGGTTATGTTGAAAGCTTAGTTTCAACCTCTTGA
Protein sequence

>MsG0780038489.01.T01

MVSNRSTSEDELDCSVVPFPVRLLEAPLTIVPFDPSIRFRSVFHYNAIADDPYYRLSNMDCYHIVGSCNGLICLLSYSRGITELENSCFRLWNPATKSLSEKLGYSTDYFKLTFGYDISNDTYKVVAFSSTEVKIFSLSDNVWRDIPKFPIVPFDIEASRCHPYVNNGVYVSGTINWLTIQNKTEYDWNDISIDQFLILSLDLTTETYQHLRPPQGFVEVPPVDPAVTVLMDCLCFSHRSKETHFVLWLMMEYGVQESWTQFLKISFQDLQIYYGFSGSLEYDSQLFLFPLYLSESDETLIMASCQEKHAVLYNWRDKRVEQIISVDNEILWFHTKGYVESLVSTS*