AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028158.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028158.01.T01 MTR_5g068040 86.944 360 20 4 1 345 34 381 0.0 597
MsG0580028158.01.T01 MTR_5g069760 46.849 365 156 12 1 345 24 370 4.59e-103 308
MsG0580028158.01.T01 MTR_2g043410 43.544 395 158 12 1 346 40 418 2.27e-97 295
MsG0580028158.01.T01 MTR_4g129190 46.757 370 169 11 1 345 24 390 1.71e-96 291
MsG0580028158.01.T01 MTR_5g069930 45.380 368 160 13 1 343 24 375 4.88e-96 290
MsG0580028158.01.T01 MTR_2g043400 43.766 393 160 11 1 346 41 419 2.14e-95 290
MsG0580028158.01.T01 MTR_7g055870 44.444 396 168 11 2 346 32 426 7.33e-94 286
MsG0580028158.01.T01 MTR_7g055930 44.697 396 167 11 2 346 32 426 1.07e-93 286
MsG0580028158.01.T01 MTR_7g056290 44.246 391 159 13 1 343 40 419 8.19e-92 281
MsG0580028158.01.T01 MTR_7g055977 45.152 361 172 11 4 345 28 381 2.06e-91 278
MsG0580028158.01.T01 MTR_7g056390 43.878 392 163 13 1 345 36 417 2.19e-89 274
MsG0580028158.01.T01 MTR_0464s0020 42.750 400 165 14 1 346 41 430 2.25e-88 272
MsG0580028158.01.T01 MTR_3g072470 41.902 389 169 12 1 342 37 415 6.65e-88 271
MsG0580028158.01.T01 MTR_6g065510 43.353 346 140 6 1 345 41 331 1.88e-87 266
MsG0580028158.01.T01 MTR_3g437520 43.784 370 152 12 1 322 41 402 2.16e-87 271
MsG0580028158.01.T01 MTR_7g056003 43.003 393 161 16 1 346 33 409 2.71e-87 269
MsG0580028158.01.T01 MTR_7g057270 40.897 379 178 12 1 343 44 412 4.25e-85 263
MsG0580028158.01.T01 MTR_1g442850 44.022 368 165 15 1 343 23 374 1.44e-84 261
MsG0580028158.01.T01 MTR_6g055210 41.085 387 176 15 1 343 40 418 6.74e-82 256
MsG0580028158.01.T01 MTR_4g013180 42.286 350 173 10 1 326 29 373 4.87e-81 254
MsG0580028158.01.T01 MTR_7g055987 46.729 321 126 12 1 299 38 335 6.52e-81 251
MsG0580028158.01.T01 MTR_3g464470 41.176 374 175 14 1 346 25 381 8.12e-80 249
MsG0580028158.01.T01 MTR_7g050520 43.869 367 164 15 1 343 40 388 6.36e-79 246
MsG0580028158.01.T01 MTR_7g022600 40.310 387 180 13 1 343 41 420 1.27e-78 247
MsG0580028158.01.T01 MTR_7g078900 40.199 403 174 11 1 345 30 423 3.50e-78 246
MsG0580028158.01.T01 MTR_6g092560 41.099 382 169 15 2 344 31 395 9.14e-78 245
MsG0580028158.01.T01 MTR_4g013175 37.871 404 185 10 2 345 29 426 1.03e-77 244
MsG0580028158.01.T01 MTR_7g050480 43.750 368 163 16 1 343 40 388 1.67e-77 243
MsG0580028158.01.T01 MTR_7g056710 43.802 363 165 14 1 343 36 379 2.16e-77 242
MsG0580028158.01.T01 MTR_4g034860 41.926 353 154 13 10 322 49 390 2.40e-77 243
MsG0580028158.01.T01 MTR_3g080370 41.772 395 161 17 1 343 39 416 3.23e-77 244
MsG0580028158.01.T01 MTR_4g013185 38.025 405 185 10 1 345 28 426 3.41e-77 243
MsG0580028158.01.T01 MTR_7g061090 41.602 387 160 15 1 343 40 404 9.85e-77 241
MsG0580028158.01.T01 MTR_7g091630 39.541 392 176 12 1 343 50 429 1.56e-76 242
MsG0580028158.01.T01 MTR_0128s0020 40.751 373 179 10 1 345 36 394 2.35e-76 240
MsG0580028158.01.T01 MTR_7g066850 42.706 377 168 15 1 343 41 403 2.71e-76 242
MsG0580028158.01.T01 MTR_1g088120 39.547 397 177 15 1 346 28 412 4.25e-76 240
MsG0580028158.01.T01 MTR_4g033495 40.053 377 178 14 1 345 45 405 7.75e-76 240
MsG0580028158.01.T01 MTR_7g061050 42.359 373 164 14 1 343 31 382 1.06e-75 238
MsG0580028158.01.T01 MTR_7g060940 41.333 375 166 12 1 343 40 392 1.21e-75 238
MsG0580028158.01.T01 MTR_2g010950 39.084 371 193 9 1 343 38 403 1.73e-75 238
MsG0580028158.01.T01 MTR_3g464500 39.785 372 186 12 1 346 45 404 1.02e-74 236
MsG0580028158.01.T01 MTR_7g056503 42.287 376 166 13 1 343 39 396 1.04e-74 236
MsG0580028158.01.T01 MTR_7g052150 42.162 370 176 12 1 343 40 398 1.13e-74 236
MsG0580028158.01.T01 MTR_8g066440 41.842 380 170 13 1 346 41 403 1.30e-74 236
MsG0580028158.01.T01 MTR_7g055830 40.108 369 155 9 2 346 32 358 1.73e-74 234
MsG0580028158.01.T01 MTR_5g056020 39.695 393 175 12 3 343 37 419 1.79e-74 238
MsG0580028158.01.T01 MTR_7g060960 42.898 352 157 11 1 343 50 366 1.91e-74 234
MsG0580028158.01.T01 MTR_0128s0010 38.992 377 183 12 1 346 39 399 2.77e-74 235
MsG0580028158.01.T01 MTR_4g024890 41.667 372 172 15 1 343 28 383 3.45e-74 234
MsG0580028158.01.T01 MTR_7g055953 50.633 237 108 6 111 345 86 315 7.22e-74 231
MsG0580028158.01.T01 MTR_7g078840 40.049 407 180 15 1 345 28 432 7.22e-74 235
MsG0580028158.01.T01 MTR_7g445890 40.000 365 186 10 1 346 34 384 8.58e-74 233
MsG0580028158.01.T01 MTR_6g016285 40.360 389 173 14 2 343 40 416 1.24e-73 234
MsG0580028158.01.T01 MTR_1g071010 39.418 378 175 12 1 346 33 388 1.59e-73 233
MsG0580028158.01.T01 MTR_7g061060 41.595 351 152 12 1 318 31 361 1.87e-73 233
MsG0580028158.01.T01 MTR_0128s0070 38.978 372 186 10 1 345 40 397 3.20e-73 232
MsG0580028158.01.T01 MTR_0097s0030 40.860 372 174 12 1 343 32 386 4.70e-73 231
MsG0580028158.01.T01 MTR_2g047240 40.860 372 174 12 1 343 32 386 4.70e-73 231
MsG0580028158.01.T01 MTR_2g010920 38.107 391 189 12 1 343 38 423 7.22e-73 232
MsG0580028158.01.T01 MTR_7g066030 39.276 387 171 14 1 345 39 403 1.37e-72 231
MsG0580028158.01.T01 MTR_7g066840 41.176 374 171 14 1 343 41 396 1.37e-72 231
MsG0580028158.01.T01 MTR_7g056797 40.576 382 167 14 1 343 41 401 3.80e-72 229
MsG0580028158.01.T01 MTR_7g066000 38.259 379 182 13 1 345 43 403 6.71e-72 229
MsG0580028158.01.T01 MTR_7g028660 38.933 375 175 12 1 345 29 379 1.10e-71 228
MsG0580028158.01.T01 MTR_0707s0020 38.005 421 161 17 2 344 45 443 1.41e-71 229
MsG0580028158.01.T01 MTR_7g066100 37.371 388 178 13 1 345 29 394 1.79e-71 228
MsG0580028158.01.T01 MTR_7g079160 38.660 388 168 12 1 327 26 404 1.88e-71 230
MsG0580028158.01.T01 MTR_6g017280 40.000 375 184 14 1 346 27 389 3.11e-71 227
MsG0580028158.01.T01 MTR_7g056760 39.948 383 170 15 1 343 41 403 6.75e-71 226
MsG0580028158.01.T01 MTR_7g062100 39.402 368 190 12 1 346 42 398 9.50e-71 226
MsG0580028158.01.T01 MTR_7g078040 37.170 417 180 14 1 345 27 433 1.96e-70 226
MsG0580028158.01.T01 MTR_5g096710 40.420 381 171 14 1 346 41 400 2.90e-70 224
MsG0580028158.01.T01 MTR_7g056717 41.758 364 172 13 1 343 40 384 3.64e-70 224
MsG0580028158.01.T01 MTR_6g086920 38.283 431 158 19 2 343 57 468 6.18e-70 226
MsG0580028158.01.T01 MTR_7g070830 37.150 393 185 14 1 343 39 419 7.68e-70 224
MsG0580028158.01.T01 MTR_7g056737 41.854 356 171 12 1 336 40 379 1.26e-69 223
MsG0580028158.01.T01 MTR_7g056200 40.426 376 161 14 1 346 41 383 1.86e-69 222
MsG0580028158.01.T01 MTR_4g030980 36.609 407 183 12 1 344 33 427 1.89e-69 223
MsG0580028158.01.T01 MTR_2g047892 41.379 377 166 16 1 343 40 395 4.82e-69 221
MsG0580028158.01.T01 MTR_7g056260 42.088 297 133 6 1 269 32 317 1.04e-68 218
MsG0580028158.01.T01 MTR_7g070880 37.340 391 187 14 1 343 39 419 1.19e-68 221
MsG0580028158.01.T01 MTR_7g035295 39.633 381 162 16 1 346 34 381 1.94e-68 219
MsG0580028158.01.T01 MTR_4g011660 36.869 396 187 11 1 346 37 419 2.14e-68 220
MsG0580028158.01.T01 MTR_4g031020 36.118 407 185 12 1 344 33 427 4.78e-68 220
MsG0580028158.01.T01 MTR_0649s0020 38.630 365 193 11 2 343 30 386 1.17e-67 218
MsG0580028158.01.T01 MTR_7g009265 42.025 326 162 12 41 346 7 325 1.80e-67 215
MsG0580028158.01.T01 MTR_7g056173 48.548 241 112 7 114 343 26 265 3.87e-67 214
MsG0580028158.01.T01 MTR_5g043160 38.929 411 161 17 1 343 68 456 9.24e-67 217
MsG0580028158.01.T01 MTR_4g008790 38.583 381 156 12 2 326 58 416 1.84e-66 217
MsG0580028158.01.T01 MTR_0242s0060 35.910 401 192 14 1 345 27 418 1.95e-66 215
MsG0580028158.01.T01 MTR_0242s0040 35.910 401 192 14 1 345 27 418 1.95e-66 215
MsG0580028158.01.T01 MTR_2g047878 37.637 364 166 13 1 343 39 362 2.49e-66 213
MsG0580028158.01.T01 MTR_7g077970 35.309 405 195 13 1 345 25 422 7.31e-66 214
MsG0580028158.01.T01 MTR_2g047200 40.108 369 179 17 2 343 39 392 7.64e-66 213
MsG0580028158.01.T01 MTR_7g062060 39.340 394 167 15 1 345 30 400 1.59e-65 213
MsG0580028158.01.T01 MTR_7g113500 39.535 301 168 8 53 343 84 380 1.18e-64 209
MsG0580028158.01.T01 MTR_2g010900 37.273 330 178 7 1 303 1 328 1.62e-64 209
MsG0580028158.01.T01 MTR_7g078860 38.235 374 162 13 1 326 27 379 3.09e-63 206
MsG0580028158.01.T01 MTR_2g006360 41.408 355 139 17 1 343 64 361 5.89e-63 204
MsG0580028158.01.T01 MTR_4g030830 38.642 383 178 16 1 343 27 392 1.01e-62 205
MsG0580028158.01.T01 MTR_4g019990 38.320 381 180 12 1 343 24 387 1.17e-62 204
MsG0580028158.01.T01 MTR_7g066060 38.220 382 182 15 3 346 43 408 2.18e-62 207
MsG0580028158.01.T01 MTR_7g091640 40.728 302 144 10 1 273 53 348 3.73e-62 203
MsG0580028158.01.T01 MTR_7g077910 40.708 339 152 14 40 345 14 336 8.99e-61 198
MsG0580028158.01.T01 MTR_7g056170 38.945 398 156 14 1 343 93 458 1.05e-60 201
MsG0580028158.01.T01 MTR_7g077990 38.158 380 172 17 1 341 35 390 1.74e-60 199
MsG0580028158.01.T01 MTR_7g056570 38.147 367 186 15 1 345 36 383 3.34e-60 199
MsG0580028158.01.T01 MTR_7g052670 36.000 400 184 16 1 343 39 423 6.06e-59 196
MsG0580028158.01.T01 MTR_5g058620 42.403 283 123 11 90 344 11 281 6.49e-59 192
MsG0580028158.01.T01 MTR_1g058870 42.403 283 123 11 90 344 11 281 6.49e-59 192
MsG0580028158.01.T01 MTR_7g022670 35.695 367 154 12 1 343 41 349 1.20e-58 193
MsG0580028158.01.T01 MTR_1g029650 36.935 398 175 15 3 345 28 404 2.24e-58 194
MsG0580028158.01.T01 MTR_3g013470 34.937 395 164 13 2 339 14 372 1.13e-57 191
MsG0580028158.01.T01 MTR_7g077070 35.644 404 194 17 1 345 34 430 2.27e-57 192
MsG0580028158.01.T01 MTR_6g017295 38.994 318 153 9 40 322 15 326 2.34e-57 195
MsG0580028158.01.T01 MTR_7g056820 34.853 373 189 13 1 343 25 373 7.64e-57 189
MsG0580028158.01.T01 MTR_7g034310 47.257 237 100 9 112 345 14 228 1.01e-56 184
MsG0580028158.01.T01 MTR_7g061010 39.130 368 178 12 1 343 40 386 2.62e-56 188
MsG0580028158.01.T01 MTR_4g030090 35.770 383 190 15 1 343 32 398 8.48e-56 187
MsG0580028158.01.T01 MTR_2g047895 35.974 303 165 9 47 339 22 305 1.65e-55 184
MsG0580028158.01.T01 MTR_7g070440 35.946 370 188 12 1 344 25 371 7.07e-55 184
MsG0580028158.01.T01 MTR_4g129160 38.268 358 142 15 1 302 26 360 9.23e-55 183
MsG0580028158.01.T01 MTR_7g066010 35.509 383 154 14 3 345 41 370 1.73e-54 183
MsG0580028158.01.T01 MTR_6g017305 39.568 278 143 9 85 346 15 283 2.26e-54 180
MsG0580028158.01.T01 MTR_2g437110 36.203 395 157 14 1 343 40 391 5.52e-54 185
MsG0580028158.01.T01 MTR_7g066080 35.516 397 191 16 1 346 34 416 7.79e-54 183
MsG0580028158.01.T01 MTR_2g027820 36.339 366 143 11 1 343 1 299 3.62e-53 177
MsG0580028158.01.T01 MTR_1g015740 34.031 382 135 9 1 345 26 327 1.50e-52 177
MsG0580028158.01.T01 MTR_5g069950 44.776 201 83 6 78 275 28 203 2.41e-51 170
MsG0580028158.01.T01 MTR_7g445750 38.000 300 135 10 1 258 41 331 1.37e-50 171
MsG0580028158.01.T01 MTR_6g017270 33.784 370 167 11 1 346 27 342 1.85e-50 171
MsG0580028158.01.T01 MTR_6g088385 38.754 289 133 9 80 344 50 318 4.02e-50 170
MsG0580028158.01.T01 MTR_2g461450 36.207 348 176 13 1 328 36 357 4.59e-50 171
MsG0580028158.01.T01 MTR_1g112010 35.326 368 165 13 5 344 2 324 7.26e-50 169
MsG0580028158.01.T01 MTR_7g056023 42.739 241 114 10 24 250 47 277 7.15e-49 166
MsG0580028158.01.T01 MTR_0267s0050 35.556 360 183 16 2 328 25 368 1.55e-48 168
MsG0580028158.01.T01 MTR_1g015730 35.411 401 171 17 1 345 27 395 6.89e-47 164
MsG0580028158.01.T01 MTR_4g030110 34.060 367 173 15 1 330 48 382 8.42e-47 163
MsG0580028158.01.T01 MTR_4g037465 32.520 369 208 14 1 343 39 392 1.34e-46 163
MsG0580028158.01.T01 MTR_4g030760 35.467 375 174 14 1 343 91 429 6.35e-46 162
MsG0580028158.01.T01 MTR_1g047490 36.735 294 136 10 1 270 40 307 1.51e-45 158
MsG0580028158.01.T01 MTR_7g078960 35.948 306 150 11 69 346 1 288 1.64e-45 157
MsG0580028158.01.T01 MTR_3g013950 34.072 361 189 17 2 328 25 370 2.17e-45 159
MsG0580028158.01.T01 MTR_7g006360 36.752 351 115 14 1 345 27 276 2.36e-45 157
MsG0580028158.01.T01 MTR_7g091610 42.718 206 111 5 141 343 44 245 5.29e-45 154
MsG0580028158.01.T01 MTR_6g081280 38.589 241 119 6 114 343 17 239 6.26e-43 149
MsG0580028158.01.T01 MTR_7g058630 46.552 174 83 4 174 346 17 181 7.82e-43 147
MsG0580028158.01.T01 MTR_7g037670 33.894 357 160 12 1 345 41 333 9.04e-43 151
MsG0580028158.01.T01 MTR_5g011350 42.857 245 108 10 14 241 9 238 9.89e-43 149
MsG0580028158.01.T01 MTR_8g101940 33.422 377 189 14 1 344 20 367 6.37e-42 150
MsG0580028158.01.T01 MTR_7g061940 39.662 237 120 7 88 315 44 266 5.48e-41 144
MsG0580028158.01.T01 MTR_2g010935 37.607 234 108 6 120 343 43 248 1.18e-39 140
MsG0580028158.01.T01 MTR_4g030790 34.708 291 131 11 1 272 37 287 5.15e-39 141
MsG0580028158.01.T01 MTR_6g042600 46.667 165 72 5 188 344 168 324 2.03e-37 139
MsG0580028158.01.T01 MTR_6g042600 41.221 131 61 5 1 129 54 170 7.20e-19 87.4
MsG0580028158.01.T01 MTR_4g128320 34.375 256 130 7 79 327 37 261 6.34e-37 134
MsG0580028158.01.T01 MTR_7g078880 29.917 361 157 11 1 341 27 311 1.08e-36 136
MsG0580028158.01.T01 MTR_8g030630 45.349 172 78 5 166 330 83 245 2.06e-36 137
MsG0580028158.01.T01 MTR_8g030630 39.175 194 88 6 130 322 276 440 3.30e-32 125
MsG0580028158.01.T01 MTR_4g006350 32.105 380 192 16 6 343 518 873 4.86e-36 139
MsG0580028158.01.T01 MTR_2g017720 40.991 222 111 9 125 340 89 296 9.69e-36 134
MsG0580028158.01.T01 MTR_1g097560 28.779 344 179 13 1 322 54 353 1.33e-35 133
MsG0580028158.01.T01 MTR_2g021150 28.684 380 190 16 1 343 32 367 5.75e-35 131
MsG0580028158.01.T01 MTR_2g029990 28.919 370 199 15 1 343 69 401 7.80e-35 132
MsG0580028158.01.T01 MTR_2g060555 35.581 267 125 12 82 334 44 277 1.57e-34 128
MsG0580028158.01.T01 MTR_7g061100 40.183 219 99 8 1 214 31 222 1.63e-34 129
MsG0580028158.01.T01 MTR_3g007330 29.794 339 186 12 1 314 66 377 2.40e-34 130
MsG0580028158.01.T01 MTR_4g020000 39.474 228 115 7 113 328 111 327 2.84e-34 129
MsG0580028158.01.T01 MTR_7g030040 33.887 301 117 12 50 343 110 335 4.62e-33 125
MsG0580028158.01.T01 MTR_1g050542 28.286 350 191 13 1 328 76 387 3.76e-32 124
MsG0580028158.01.T01 MTR_2g046920 27.920 351 185 12 1 322 42 353 6.38e-32 123
MsG0580028158.01.T01 MTR_2g021190 28.954 373 195 17 1 343 39 371 6.78e-32 123
MsG0580028158.01.T01 MTR_7g013590 31.707 369 193 15 1 342 54 390 1.24e-31 123
MsG0580028158.01.T01 MTR_0128s0110 35.514 214 120 7 135 343 2 202 1.29e-31 118
MsG0580028158.01.T01 MTR_4g061340 30.471 361 176 16 1 328 44 362 1.59e-31 122
MsG0580028158.01.T01 MTR_3g014540 28.000 350 192 13 1 324 47 362 1.77e-31 122
MsG0580028158.01.T01 MTR_3g007360 30.347 346 181 14 1 319 70 382 4.25e-31 121
MsG0580028158.01.T01 MTR_7g078940 27.981 411 168 13 1 343 50 400 2.01e-30 119
MsG0580028158.01.T01 MTR_7g056793 32.932 249 99 8 106 343 39 230 4.50e-30 115
MsG0580028158.01.T01 MTR_6g007135 29.412 374 204 16 1 343 44 388 7.67e-30 118
MsG0580028158.01.T01 MTR_3g007410 30.058 346 182 14 1 319 70 382 9.10e-30 118
MsG0580028158.01.T01 MTR_0354s0030 54.639 97 42 1 252 346 1 97 2.07e-29 108
MsG0580028158.01.T01 MTR_3g055000 40.845 142 66 3 203 343 1 125 3.82e-29 109
MsG0580028158.01.T01 MTR_1g097490 26.912 353 185 11 1 326 67 373 1.74e-28 114
MsG0580028158.01.T01 MTR_7g050490 43.787 169 69 6 1 149 26 188 2.24e-28 109
MsG0580028158.01.T01 MTR_6g004660 28.533 375 207 15 1 343 34 379 2.69e-28 113
MsG0580028158.01.T01 MTR_3g014570 28.409 352 193 11 1 326 47 365 2.70e-28 113
MsG0580028158.01.T01 MTR_2g078900 28.618 304 169 11 1 282 51 328 3.29e-28 113
MsG0580028158.01.T01 MTR_3g013770 29.333 300 152 13 1 267 51 323 8.61e-28 112
MsG0580028158.01.T01 MTR_3g006570 26.273 373 209 15 1 343 39 375 1.07e-27 112
MsG0580028158.01.T01 MTR_3g010430 27.083 384 193 15 1 343 54 391 2.28e-27 111
MsG0580028158.01.T01 MTR_3g036290 31.359 287 146 14 1 268 40 294 2.75e-27 110
MsG0580028158.01.T01 MTR_1g094210 27.273 363 204 14 1 343 75 397 5.87e-27 110
MsG0580028158.01.T01 MTR_7g066040 37.566 189 87 9 54 218 19 200 5.88e-27 107
MsG0580028158.01.T01 MTR_6g065980 27.841 352 185 16 1 328 34 340 6.20e-27 109
MsG0580028158.01.T01 MTR_6g021880 29.255 376 200 17 1 343 38 380 9.74e-27 109
MsG0580028158.01.T01 MTR_8g101580 27.401 354 189 13 1 326 64 377 1.09e-26 109
MsG0580028158.01.T01 MTR_2g021155 29.268 369 186 15 1 337 54 379 1.37e-26 111
MsG0580028158.01.T01 MTR_2g021155 27.642 246 139 9 87 319 711 930 2.61e-18 86.7
MsG0580028158.01.T01 MTR_1g094210 27.673 318 173 12 1 298 75 355 1.88e-26 108
MsG0580028158.01.T01 MTR_3g009240 31.757 296 144 14 1 269 54 318 1.92e-26 108
MsG0580028158.01.T01 MTR_7g066830 34.091 176 85 6 3 155 15 182 2.94e-26 103
MsG0580028158.01.T01 MTR_0044s0300 27.371 369 206 15 1 343 56 388 4.97e-26 107
MsG0580028158.01.T01 MTR_1g097330 28.371 356 183 18 1 326 34 347 6.09e-26 107
MsG0580028158.01.T01 MTR_4g024870 34.538 249 114 12 1 213 62 297 1.60e-25 106
MsG0580028158.01.T01 MTR_3g013740 27.978 361 192 15 1 324 62 391 1.63e-25 106
MsG0580028158.01.T01 MTR_2g046900 26.064 376 207 14 1 343 46 383 2.43e-25 105
MsG0580028158.01.T01 MTR_3g009260 30.986 284 159 11 1 269 59 320 2.93e-25 105
MsG0580028158.01.T01 MTR_3g024040 27.371 369 196 15 1 343 49 371 3.99e-25 104
MsG0580028158.01.T01 MTR_1g056710 27.540 374 206 16 1 345 52 389 4.72e-25 104
MsG0580028158.01.T01 MTR_4g108820 27.891 294 140 13 1 277 60 298 5.10e-25 103
MsG0580028158.01.T01 MTR_4g031770 25.849 383 207 16 1 343 22 367 9.39e-25 103
MsG0580028158.01.T01 MTR_1g054725 28.239 301 158 14 1 269 38 312 1.08e-24 103
MsG0580028158.01.T01 MTR_5g022420 26.286 350 192 14 1 326 45 352 1.43e-24 103
MsG0580028158.01.T01 MTR_3g436150 29.870 308 155 15 1 270 50 334 1.51e-24 103
MsG0580028158.01.T01 MTR_3g030310 25.964 389 204 17 1 343 39 389 1.73e-24 103
MsG0580028158.01.T01 MTR_1g054575 29.392 296 156 12 1 272 70 336 2.32e-24 104
MsG0580028158.01.T01 MTR_3g010590 25.876 371 204 14 1 343 57 384 2.35e-24 102
MsG0580028158.01.T01 MTR_2g047832 26.005 373 221 15 1 343 47 394 2.49e-24 103
MsG0580028158.01.T01 MTR_2g046830 26.957 345 196 13 1 322 43 354 2.54e-24 102
MsG0580028158.01.T01 MTR_7g055850 38.824 170 64 5 2 131 32 201 2.61e-24 100
MsG0580028158.01.T01 MTR_3g007430 29.932 294 159 11 1 270 61 331 2.87e-24 102
MsG0580028158.01.T01 MTR_3g011100 29.470 302 157 14 1 271 253 529 5.50e-24 103
MsG0580028158.01.T01 MTR_2g046800 27.654 405 186 22 1 343 32 391 7.65e-24 101
MsG0580028158.01.T01 MTR_3g006530 25.600 375 210 16 1 343 58 395 1.05e-23 101
MsG0580028158.01.T01 MTR_3g010870 26.703 367 207 15 1 343 55 383 1.81e-23 100
MsG0580028158.01.T01 MTR_3g010520 26.575 365 197 16 1 343 43 358 2.20e-23 99.8
MsG0580028158.01.T01 MTR_7g407070 30.868 311 154 15 1 270 50 340 2.65e-23 100
MsG0580028158.01.T01 MTR_2g021252 27.348 362 201 17 1 343 65 383 3.44e-23 99.8
MsG0580028158.01.T01 MTR_3g006500 25.263 380 199 16 2 343 36 368 3.61e-23 99.4
MsG0580028158.01.T01 MTR_7g089830 38.125 160 75 6 168 322 8 148 4.30e-23 94.0
MsG0580028158.01.T01 MTR_2g078850 28.378 296 161 12 1 271 48 317 5.61e-23 98.6
MsG0580028158.01.T01 MTR_5g046300 26.923 364 209 16 1 343 22 349 6.24e-23 98.2
MsG0580028158.01.T01 MTR_5g046290 26.923 364 209 16 1 343 22 349 6.24e-23 98.2
MsG0580028158.01.T01 MTR_4g055060 29.667 300 154 14 1 268 48 322 7.03e-23 98.6
MsG0580028158.01.T01 MTR_3g036335 27.346 373 203 17 1 343 59 393 8.64e-23 98.6
MsG0580028158.01.T01 MTR_3g023930 24.185 368 201 13 1 343 52 366 9.32e-23 98.2
MsG0580028158.01.T01 MTR_7g070937 42.857 133 61 5 113 232 10 140 1.07e-22 93.6
MsG0580028158.01.T01 MTR_8g467140 30.435 299 152 16 1 271 50 320 1.20e-22 97.1
MsG0580028158.01.T01 MTR_5g057790 27.397 292 166 13 1 269 64 332 1.38e-22 97.8
MsG0580028158.01.T01 MTR_1g115160 27.151 372 196 16 1 343 40 365 1.79e-22 97.4
MsG0580028158.01.T01 MTR_7g058660 42.982 114 61 3 237 346 103 216 1.95e-22 94.4
MsG0580028158.01.T01 MTR_7g058660 48.684 76 37 2 53 128 10 83 1.35e-12 66.6
MsG0580028158.01.T01 MTR_3g083640 25.543 368 210 15 1 343 73 401 2.82e-22 97.1
MsG0580028158.01.T01 MTR_1g055375 27.177 379 205 18 1 343 22 365 3.50e-22 96.3
MsG0580028158.01.T01 MTR_3g011060 26.891 357 187 14 1 319 46 366 3.72e-22 96.7
MsG0580028158.01.T01 MTR_3g030330 27.609 297 160 14 1 273 38 303 4.24e-22 96.3
MsG0580028158.01.T01 MTR_3g009300 28.972 321 180 17 19 326 54 339 6.00e-22 95.5
MsG0580028158.01.T01 MTR_5g011200 24.054 370 223 15 1 343 35 373 6.85e-22 95.9
MsG0580028158.01.T01 MTR_1g016960 48.182 110 48 3 242 345 150 256 8.96e-22 93.2
MsG0580028158.01.T01 MTR_3g007270 27.303 304 163 11 1 269 65 345 1.00e-21 95.5
MsG0580028158.01.T01 MTR_3g006670 25.168 298 168 10 1 269 67 338 1.03e-21 95.5
MsG0580028158.01.T01 MTR_2g055970 26.857 350 182 17 1 319 229 535 1.18e-21 96.3
MsG0580028158.01.T01 MTR_5g057710 26.048 334 191 12 1 306 64 369 1.80e-21 94.7
MsG0580028158.01.T01 MTR_8g030660 32.599 227 97 6 1 175 45 267 2.23e-21 92.4
MsG0580028158.01.T01 MTR_3g024110 26.997 363 198 16 1 329 119 448 2.69e-21 94.7
MsG0580028158.01.T01 MTR_3g036430 24.860 358 200 13 1 343 38 341 2.79e-21 93.6
MsG0580028158.01.T01 MTR_3g011020 26.606 327 147 12 1 284 46 322 2.81e-21 94.0
MsG0580028158.01.T01 MTR_7g070900 34.682 173 71 4 113 273 235 377 3.40e-21 94.7
MsG0580028158.01.T01 MTR_7g070900 36.957 138 60 4 2 133 34 150 2.12e-14 74.3
MsG0580028158.01.T01 MTR_7g062070 42.188 128 61 6 206 325 75 197 4.19e-21 90.1
MsG0580028158.01.T01 MTR_3g010920 25.620 363 206 14 1 343 62 380 5.59e-21 93.2
MsG0580028158.01.T01 MTR_3g030250 24.665 373 200 16 2 343 56 378 5.82e-21 93.2
MsG0580028158.01.T01 MTR_8g062660 29.139 302 141 12 1 261 40 309 9.82e-21 93.6
MsG0580028158.01.T01 MTR_4g024910 45.763 118 59 3 231 346 153 267 1.64e-20 91.3
MsG0580028158.01.T01 MTR_4g024910 38.922 167 68 8 1 141 1 159 2.80e-18 84.7
MsG0580028158.01.T01 MTR_0760s0010 25.589 297 164 11 1 273 65 328 2.64e-20 91.3
MsG0580028158.01.T01 MTR_6g053260 25.970 335 177 17 1 303 355 650 6.51e-20 91.3
MsG0580028158.01.T01 MTR_3g024150 24.528 371 213 14 1 343 53 384 6.52e-20 90.1
MsG0580028158.01.T01 MTR_3g030350 27.759 299 163 14 1 274 53 323 6.66e-20 90.1
MsG0580028158.01.T01 MTR_3g010970 25.066 379 194 15 1 343 66 390 9.21e-20 89.7
MsG0580028158.01.T01 MTR_4g133170 26.099 364 196 18 1 331 22 345 9.94e-20 89.7
MsG0580028158.01.T01 MTR_6g048150 48.980 98 40 2 249 341 13 105 1.13e-19 84.3
MsG0580028158.01.T01 MTR_2g078870 25.797 345 199 14 16 343 2 306 1.50e-19 88.2
MsG0580028158.01.T01 MTR_3g024130 26.165 279 157 12 62 326 58 301 1.94e-19 87.8
MsG0580028158.01.T01 MTR_4g107820 26.648 349 183 15 1 319 54 359 2.61e-19 88.6
MsG0580028158.01.T01 MTR_4g107780 26.648 349 183 15 1 319 54 359 2.61e-19 88.6
MsG0580028158.01.T01 MTR_7g445580 40.179 112 57 3 212 322 42 144 2.69e-19 83.6
MsG0580028158.01.T01 MTR_4g107820 26.648 349 183 15 1 319 54 359 2.88e-19 88.6
MsG0580028158.01.T01 MTR_4g107780 26.648 349 183 15 1 319 54 359 3.45e-19 88.2
MsG0580028158.01.T01 MTR_3g058470 27.077 325 163 12 1 302 55 328 5.67e-19 87.4
MsG0580028158.01.T01 MTR_6g007150 28.144 334 191 18 31 343 31 336 7.61e-19 86.7
MsG0580028158.01.T01 MTR_4g021785 26.970 330 186 14 3 315 29 320 9.38e-19 86.7
MsG0580028158.01.T01 MTR_3g009310 27.119 295 161 10 1 268 60 327 1.03e-18 86.7
MsG0580028158.01.T01 MTR_2g046860 26.374 273 158 10 61 322 6 246 1.71e-18 85.5
MsG0580028158.01.T01 MTR_6g053240 25.263 380 216 16 1 343 46 394 2.11e-18 85.9
MsG0580028158.01.T01 MTR_3g055070 35.484 124 61 3 203 325 1 106 3.61e-18 80.9
MsG0580028158.01.T01 MTR_6g048120 25.131 382 218 17 1 343 54 406 6.17e-18 84.7
MsG0580028158.01.T01 MTR_6g048140 25.000 360 206 14 1 328 57 384 7.10e-18 84.3
MsG0580028158.01.T01 MTR_3g030240 23.370 368 208 13 1 343 58 376 8.28e-18 84.0
MsG0580028158.01.T01 MTR_4g030880 32.864 213 90 8 130 337 44 208 8.59e-18 84.7
MsG0580028158.01.T01 MTR_2g079810 27.049 244 128 8 1 215 24 246 1.39e-17 82.4
MsG0580028158.01.T01 MTR_3g023940 24.590 366 218 16 1 343 52 382 1.46e-17 83.2
MsG0580028158.01.T01 MTR_3g006640 24.516 310 172 10 61 343 17 291 1.53e-17 82.0
MsG0580028158.01.T01 MTR_6g004210 26.899 316 172 15 1 272 43 343 1.54e-17 83.6
MsG0580028158.01.T01 MTR_5g007610 24.533 375 217 11 1 343 59 399 2.55e-17 82.8
MsG0580028158.01.T01 MTR_5g070380 46.296 108 39 5 10 98 43 150 3.42e-17 79.0
MsG0580028158.01.T01 MTR_3g058440 28.862 246 123 11 1 216 53 276 4.02e-17 81.3
MsG0580028158.01.T01 MTR_4g132560 30.189 265 141 11 97 343 19 257 5.67e-17 80.1
MsG0580028158.01.T01 MTR_4g063955 35.484 155 81 4 1 137 45 198 8.89e-17 79.7
MsG0580028158.01.T01 MTR_3g011650 33.500 200 102 8 1 181 97 284 1.23e-16 79.3
MsG0580028158.01.T01 MTR_2g435950 26.087 276 146 12 62 322 46 278 1.32e-16 79.7
MsG0580028158.01.T01 MTR_3g010620 23.873 377 214 14 1 343 54 391 2.38e-16 79.7
MsG0580028158.01.T01 MTR_3g010390 28.302 318 146 17 1 268 51 336 2.54e-16 79.7
MsG0580028158.01.T01 MTR_2g021210 24.110 365 210 13 2 343 103 423 9.45e-16 78.2
MsG0580028158.01.T01 MTR_1g055055 24.784 347 191 17 1 326 44 341 2.23e-15 76.6
MsG0580028158.01.T01 MTR_2g426060 24.207 347 187 15 1 303 24 338 2.27e-15 77.0
MsG0580028158.01.T01 MTR_7g021580 49.462 93 33 4 254 343 218 299 2.67e-15 75.9
MsG0580028158.01.T01 MTR_7g021580 30.769 182 107 7 1 178 51 217 7.82e-14 71.6
MsG0580028158.01.T01 MTR_4g023070 24.159 327 190 13 3 299 23 321 3.28e-15 76.3
MsG0580028158.01.T01 MTR_3g058480 28.516 256 113 10 1 216 57 282 3.52e-15 75.9
MsG0580028158.01.T01 MTR_2g426020 25.215 349 182 15 1 307 24 335 5.15e-15 75.9
MsG0580028158.01.T01 MTR_5g046260 24.315 292 150 10 1 274 22 260 7.09e-15 74.7
MsG0580028158.01.T01 MTR_7g056727 44.444 99 43 3 54 142 51 147 7.11e-15 73.6
MsG0580028158.01.T01 MTR_3g009250 32.143 196 109 8 1 181 59 245 8.80e-15 73.6
MsG0580028158.01.T01 MTR_2g025960 23.208 293 170 11 62 325 3 269 9.21e-15 74.3
MsG0580028158.01.T01 MTR_5g046280 25.874 286 169 14 65 343 3 252 9.71e-15 73.6
MsG0580028158.01.T01 MTR_4g023120 24.024 333 183 13 3 299 23 321 4.45e-14 72.8
MsG0580028158.01.T01 MTR_4g023130 28.358 268 139 10 3 268 29 245 4.54e-14 72.4
MsG0580028158.01.T01 MTR_1g046600 51.429 70 34 0 246 315 237 306 5.83e-14 72.0
MsG0580028158.01.T01 MTR_3g034130 24.355 349 177 13 1 306 27 331 7.48e-14 72.4
MsG0580028158.01.T01 MTR_7g022580 39.823 113 53 4 22 120 1 112 7.78e-14 69.3
MsG0580028158.01.T01 MTR_4g023090 25.914 301 167 11 1 272 34 307 7.86e-14 72.4
MsG0580028158.01.T01 MTR_8g069515 32.090 134 64 3 1 107 34 167 1.12e-13 68.9
MsG0580028158.01.T01 MTR_3g010870 30.457 197 104 10 1 177 55 238 1.38e-13 70.9
MsG0580028158.01.T01 MTR_4g109280 25.938 320 178 11 1 299 26 307 1.44e-13 71.2
MsG0580028158.01.T01 MTR_1g055065 24.451 319 171 13 58 343 5 286 1.95e-13 70.1
MsG0580028158.01.T01 MTR_1g055070 27.519 258 124 13 1 216 67 303 2.15e-13 70.9
MsG0580028158.01.T01 MTR_2g043420 39.623 106 44 4 1 86 44 149 2.58e-13 67.4
MsG0580028158.01.T01 MTR_0667s0010 23.514 387 223 16 1 346 24 378 2.94e-13 70.5
MsG0580028158.01.T01 MTR_1g112930 26.333 300 154 15 1 269 43 306 3.47e-13 70.5
MsG0580028158.01.T01 MTR_3g083660 25.514 243 137 7 113 346 75 282 3.63e-13 69.3
MsG0580028158.01.T01 MTR_3g096280 23.684 380 192 16 1 343 23 341 3.89e-13 70.1
MsG0580028158.01.T01 MTR_7g078050 37.069 116 54 4 1 100 24 136 4.27e-13 68.6
MsG0580028158.01.T01 MTR_8g073550 29.714 175 89 5 1 149 48 214 5.37e-13 68.2
MsG0580028158.01.T01 MTR_2g028160 26.257 358 180 18 1 307 23 347 9.03e-13 69.3
MsG0580028158.01.T01 MTR_7g060930 47.692 65 32 2 192 255 15 78 1.45e-12 62.8
MsG0580028158.01.T01 MTR_8g013010 27.490 251 128 11 1 220 72 299 1.52e-12 67.8
MsG0580028158.01.T01 MTR_4g117770 25.926 324 179 14 1 299 29 316 1.81e-12 68.2
MsG0580028158.01.T01 MTR_4g117810 25.926 324 179 14 1 299 29 316 1.81e-12 68.2
MsG0580028158.01.T01 MTR_4g094365 28.502 207 107 7 1 181 26 217 2.65e-12 67.4
MsG0580028158.01.T01 MTR_1004s0010 25.108 231 129 10 51 273 104 298 4.11e-12 67.0
MsG0580028158.01.T01 MTR_3g009290 29.130 230 118 9 7 211 49 258 4.17e-12 65.9
MsG0580028158.01.T01 MTR_1g115185 25.916 382 211 17 1 346 57 402 7.13e-12 66.6
MsG0580028158.01.T01 MTR_3g034180 24.786 351 173 14 1 302 141 449 7.85e-12 66.6
MsG0580028158.01.T01 MTR_7g038710 64.151 53 19 0 291 343 94 146 8.43e-12 63.2
MsG0580028158.01.T01 MTR_1g113900 25.322 233 141 7 115 343 41 244 1.02e-11 64.7
MsG0580028158.01.T01 MTR_2g026010 24.340 341 179 16 2 303 23 323 1.21e-11 65.9
MsG0580028158.01.T01 MTR_1g100763 24.561 285 135 15 1 259 16 246 1.21e-11 65.1
MsG0580028158.01.T01 MTR_2g021050 24.169 331 182 14 1 303 23 312 1.47e-11 65.5
MsG0580028158.01.T01 MTR_4g116330 25.141 354 187 16 1 322 41 348 1.86e-11 65.1
MsG0580028158.01.T01 MTR_3g010450 27.074 229 119 12 8 216 22 222 2.22e-11 63.5
MsG0580028158.01.T01 MTR_1g097510 25.962 208 123 7 120 321 68 250 2.65e-11 63.9
MsG0580028158.01.T01 MTR_1g068835 22.526 293 180 11 1 268 22 292 2.94e-11 64.3
MsG0580028158.01.T01 MTR_7g061130 43.617 94 44 3 252 343 1 87 4.98e-11 58.9
MsG0580028158.01.T01 MTR_2g024110 24.405 336 183 16 1 303 22 319 5.56e-11 63.5
MsG0580028158.01.T01 MTR_3g034160 24.522 314 171 10 1 275 27 313 7.15e-11 63.2
MsG0580028158.01.T01 MTR_2g028130 22.034 354 198 15 1 307 23 345 8.06e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028158.01.T01 AT3G23880 26.190 294 164 12 2 267 33 301 1.93e-13 70.9
MsG0580028158.01.T01 AT3G06240 25.338 296 167 17 61 343 164 418 7.13e-12 66.6

Find 77 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATCAACACTGCAATAAT+TGG 0.293574 5:+75893019 None:intergenic
TGCTTGGTCTTCATGACTAT+TGG 0.300850 5:+75892790 None:intergenic
AGGAACAACTGTCAGCTAAT+TGG 0.304235 5:+75892671 None:intergenic
TCAGATATATTCCCTGTGGC+TGG 0.314790 5:+75893433 None:intergenic
TTCAGCAATCACAACGAAAA+AGG 0.315679 5:-75893630 MsG0580028158.01.T01:CDS
GAGCCATCTGGTTCCGTGTT+TGG 0.316875 5:-75893459 MsG0580028158.01.T01:CDS
CATTTCAACTAAAAGTTATA+AGG 0.316906 5:-75893341 MsG0580028158.01.T01:CDS
GCCAATTATTGCAGTGTTGA+TGG 0.328267 5:-75893020 MsG0580028158.01.T01:CDS
AGGATCTTCAAATTGACATT+AGG 0.335431 5:-75892892 MsG0580028158.01.T01:CDS
CACAATGGGGATAATAATAA+TGG 0.342150 5:+75892845 None:intergenic
ATTTAAGTGGCACTATTAAC+TGG 0.365625 5:-75893192 MsG0580028158.01.T01:CDS
ATTCCTCAAAATCAGCTATC+AGG 0.409168 5:-75892912 MsG0580028158.01.T01:CDS
ATATGGAAGATGACACAATT+TGG 0.415570 5:-75892956 MsG0580028158.01.T01:CDS
GAGAAATCTTCCATGTGTTC+CGG 0.420005 5:-75893263 MsG0580028158.01.T01:CDS
TTTGGAAAGAAACCATTCAA+TGG 0.421207 5:+75892715 None:intergenic
TAAAGTGCCTTTGCAAGTCT+TGG 0.430637 5:-75893693 MsG0580028158.01.T01:CDS
AGTTATAAGGTGGTGGGGTT+CGG 0.432445 5:-75893328 MsG0580028158.01.T01:CDS
CATCTTCCATATCACAAAAT+CGG 0.436231 5:+75892967 None:intergenic
AACTAAAAGTTATAAGGTGG+TGG 0.439310 5:-75893335 MsG0580028158.01.T01:CDS
GTGATTATTGCGCTTGATCT+TGG 0.440783 5:-75893106 MsG0580028158.01.T01:CDS
GAATTACCAATCCCATTGAA+TGG 0.441535 5:-75892727 MsG0580028158.01.T01:CDS
TTGGAAAGAAACCATTCAAT+GGG 0.441690 5:+75892716 None:intergenic
CAAACATATCAATCCATTGC+AGG 0.442831 5:+75893507 None:intergenic
TGGAACGACAATGTCAATAA+AGG 0.445890 5:-75893220 MsG0580028158.01.T01:CDS
CAGATATATTCCCTGTGGCT+GGG 0.449495 5:+75893434 None:intergenic
ATAATTGGCTCAATGACAAA+TGG 0.452337 5:+75893034 None:intergenic
ACAATGCGGGCATAGTTTGC+TGG 0.457603 5:-75893240 MsG0580028158.01.T01:CDS
TCTGTTTGACTGATAATGTC+TGG 0.460304 5:-75893285 MsG0580028158.01.T01:CDS
ACCAACTACTTCGCTGCAAT+CGG 0.468877 5:+75893531 None:intergenic
AGCATGCTCAGATACACATT+TGG 0.471112 5:-75893370 MsG0580028158.01.T01:CDS
CAAACTATGCCCGCATTGTC+CGG 0.473031 5:+75893244 None:intergenic
CCATTGTGTCTTTCTGAGAA+TGG 0.474376 5:-75892830 MsG0580028158.01.T01:CDS
CAAATAAGCATCGAGCCATC+TGG 0.477186 5:-75893471 MsG0580028158.01.T01:CDS
AAGAAACCATTCAATGGGAT+TGG 0.479392 5:+75892721 None:intergenic
CGTGTTTGGAACCCAGCCAC+AGG 0.489001 5:-75893445 MsG0580028158.01.T01:CDS
CATTCTCAGAAAGACACAAT+GGG 0.502772 5:+75892831 None:intergenic
ACTAAAAGTTATAAGGTGGT+GGG 0.504361 5:-75893334 MsG0580028158.01.T01:CDS
AATTTGGAGTCGAAAAGTCT+TGG 0.507935 5:-75892940 MsG0580028158.01.T01:CDS
AATAAAGGTGAGTATTTAAG+TGG 0.511111 5:-75893205 MsG0580028158.01.T01:CDS
TAATTGGCTCAATGACAAAT+GGG 0.515684 5:+75893035 None:intergenic
CCATGTGTTCCGGACAATGC+GGG 0.526520 5:-75893253 MsG0580028158.01.T01:CDS
GAAGTAGTTGGTTCCTGCAA+TGG 0.528530 5:-75893520 MsG0580028158.01.T01:CDS
AATGGATTGATATGTTTGCT+TGG 0.529618 5:-75893502 MsG0580028158.01.T01:CDS
ACCGATTGCAGCGAAGTAGT+TGG 0.535137 5:-75893532 MsG0580028158.01.T01:CDS
CCCGCATTGTCCGGAACACA+TGG 0.535797 5:+75893253 None:intergenic
ACTTCAATCTACGGCAGGCA+AGG 0.548440 5:+75893557 None:intergenic
TATTGCGCTTGATCTTGGTA+TGG 0.548919 5:-75893101 MsG0580028158.01.T01:CDS
AAGTGGCACTATTAACTGGT+TGG 0.550518 5:-75893188 MsG0580028158.01.T01:CDS
GATGGCTCGATGCTTATTTG+CGG 0.553865 5:+75893474 None:intergenic
CTGTGGCTGGGTTCCAAACA+CGG 0.554780 5:+75893446 None:intergenic
GAATGTTGTAGATAATTGCT+TGG 0.558442 5:+75892774 None:intergenic
ACTTGATCACAATCCGGAGG+GGG 0.561471 5:+75893058 None:intergenic
CTTCAATCTACGGCAGGCAA+GGG 0.574036 5:+75893558 None:intergenic
CTAAAAGTTATAAGGTGGTG+GGG 0.575227 5:-75893333 MsG0580028158.01.T01:CDS
TTAAACAAACCTCGCAAGCG+TGG 0.579854 5:-75893397 MsG0580028158.01.T01:CDS
AATGGGACTTGATCACAATC+CGG 0.586071 5:+75893052 None:intergenic
AATCGGTGTACTTCAATCTA+CGG 0.587885 5:+75893548 None:intergenic
GGTGTACTTCAATCTACGGC+AGG 0.593316 5:+75893552 None:intergenic
AAGGTGTAATTCAACGAAGG+TGG 0.601752 5:+75893651 None:intergenic
TTCAACTAAAAGTTATAAGG+TGG 0.602061 5:-75893338 MsG0580028158.01.T01:CDS
GGGTGTTCCAAGACTTGCAA+AGG 0.611485 5:+75893686 None:intergenic
CGAAGGTGGGACTAGAGATG+AGG 0.625332 5:+75893665 None:intergenic
GGTGGGGTTCGGTACTAGAG+AGG 0.626296 5:-75893317 MsG0580028158.01.T01:CDS
CCATTCTCAGAAAGACACAA+TGG 0.633786 5:+75892830 None:intergenic
GGACTTGATCACAATCCGGA+GGG 0.633892 5:+75893056 None:intergenic
GACTTGATCACAATCCGGAG+GGG 0.635531 5:+75893057 None:intergenic
GTTCCAAACACGGAACCAGA+TGG 0.637540 5:+75893456 None:intergenic
AGGTGTAATTCAACGAAGGT+GGG 0.638563 5:+75893652 None:intergenic
GAAGGTGGGACTAGAGATGA+GGG 0.638695 5:+75893666 None:intergenic
GTGTTTGGAACCCAGCCACA+GGG 0.639638 5:-75893444 MsG0580028158.01.T01:CDS
TGAAGTGATGAGCAAAACAA+AGG 0.642073 5:+75892993 None:intergenic
TCCATGTGTTCCGGACAATG+CGG 0.643481 5:-75893254 MsG0580028158.01.T01:CDS
ATGCTAGATCCACGCTTGCG+AGG 0.645351 5:+75893388 None:intergenic
CAACATTCGAGATAATAGAG+TGG 0.677276 5:-75892759 MsG0580028158.01.T01:CDS
CTGAAGGTGTAATTCAACGA+AGG 0.683365 5:+75893648 None:intergenic
GGGACTTGATCACAATCCGG+AGG 0.687081 5:+75893055 None:intergenic
ATTCTCAGAAAGACACAATG+GGG 0.724579 5:+75892832 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATTATGTTGAAAGTT+TGG - Chr5:75893686-75893705 MsG0580028158.01.T01:CDS 20.0%
!! CATTTCAACTAAAAGTTATA+AGG - Chr5:75893041-75893060 MsG0580028158.01.T01:CDS 20.0%
!!! CAAACTTTCAACATAATTTT+TGG + Chr5:75893688-75893707 None:intergenic 20.0%
! AATAAAGGTGAGTATTTAAG+TGG - Chr5:75893177-75893196 MsG0580028158.01.T01:CDS 25.0%
! GGGAATATATCTGAAAAATT+AGG - Chr5:75892958-75892977 MsG0580028158.01.T01:CDS 25.0%
! TTCAACTAAAAGTTATAAGG+TGG - Chr5:75893044-75893063 MsG0580028158.01.T01:CDS 25.0%
AACTAAAAGTTATAAGGTGG+TGG - Chr5:75893047-75893066 MsG0580028158.01.T01:CDS 30.0%
ACTAAAAGTTATAAGGTGGT+GGG - Chr5:75893048-75893067 MsG0580028158.01.T01:CDS 30.0%
AGGATCTTCAAATTGACATT+AGG - Chr5:75893490-75893509 MsG0580028158.01.T01:CDS 30.0%
ATATGGAAGATGACACAATT+TGG - Chr5:75893426-75893445 MsG0580028158.01.T01:CDS 30.0%
ATTTAAGTGGCACTATTAAC+TGG - Chr5:75893190-75893209 MsG0580028158.01.T01:CDS 30.0%
CACAATGGGGATAATAATAA+TGG + Chr5:75893540-75893559 None:intergenic 30.0%
CATCTTCCATATCACAAAAT+CGG + Chr5:75893418-75893437 None:intergenic 30.0%
GAATGTTGTAGATAATTGCT+TGG + Chr5:75893611-75893630 None:intergenic 30.0%
TTGGAAAGAAACCATTCAAT+GGG + Chr5:75893669-75893688 None:intergenic 30.0%
TTTGGAAAGAAACCATTCAA+TGG + Chr5:75893670-75893689 None:intergenic 30.0%
! ATAATTGGCTCAATGACAAA+TGG + Chr5:75893351-75893370 None:intergenic 30.0%
! TAATTGGCTCAATGACAAAT+GGG + Chr5:75893350-75893369 None:intergenic 30.0%
!! AATGGATTGATATGTTTGCT+TGG - Chr5:75892880-75892899 MsG0580028158.01.T01:CDS 30.0%
!! TTTTTCAGATATATTCCCTG+TGG + Chr5:75892956-75892975 None:intergenic 30.0%
AAGAAACCATTCAATGGGAT+TGG + Chr5:75893664-75893683 None:intergenic 35.0%
AATCGGTGTACTTCAATCTA+CGG + Chr5:75892837-75892856 None:intergenic 35.0%
ATTCCTCAAAATCAGCTATC+AGG - Chr5:75893470-75893489 MsG0580028158.01.T01:CDS 35.0%
ATTCTCAGAAAGACACAATG+GGG + Chr5:75893553-75893572 None:intergenic 35.0%
CAAACATATCAATCCATTGC+AGG + Chr5:75892878-75892897 None:intergenic 35.0%
CAACATTCGAGATAATAGAG+TGG - Chr5:75893623-75893642 MsG0580028158.01.T01:CDS 35.0%
CATTCTCAGAAAGACACAAT+GGG + Chr5:75893554-75893573 None:intergenic 35.0%
CTAAAAGTTATAAGGTGGTG+GGG - Chr5:75893049-75893068 MsG0580028158.01.T01:CDS 35.0%
GAATTACCAATCCCATTGAA+TGG - Chr5:75893655-75893674 MsG0580028158.01.T01:CDS 35.0%
TCCATCAACACTGCAATAAT+TGG + Chr5:75893366-75893385 None:intergenic 35.0%
TGAAGTGATGAGCAAAACAA+AGG + Chr5:75893392-75893411 None:intergenic 35.0%
TGGAACGACAATGTCAATAA+AGG - Chr5:75893162-75893181 MsG0580028158.01.T01:CDS 35.0%
TTCAGCAATCACAACGAAAA+AGG - Chr5:75892752-75892771 MsG0580028158.01.T01:CDS 35.0%
! AATTTGGAGTCGAAAAGTCT+TGG - Chr5:75893442-75893461 MsG0580028158.01.T01:CDS 35.0%
! TCTGTTTGACTGATAATGTC+TGG - Chr5:75893097-75893116 MsG0580028158.01.T01:CDS 35.0%
! TTTTTCGTTGTGATTGCTGA+AGG + Chr5:75892753-75892772 None:intergenic 35.0%
!! TCAGAACCGATTTTGTGATA+TGG - Chr5:75893409-75893428 MsG0580028158.01.T01:CDS 35.0%
AAGGTGTAATTCAACGAAGG+TGG + Chr5:75892734-75892753 None:intergenic 40.0%
AAGTGGCACTATTAACTGGT+TGG - Chr5:75893194-75893213 MsG0580028158.01.T01:CDS 40.0%
AATGGGACTTGATCACAATC+CGG + Chr5:75893333-75893352 None:intergenic 40.0%
AGCATGCTCAGATACACATT+TGG - Chr5:75893012-75893031 MsG0580028158.01.T01:CDS 40.0%
AGGTGTAATTCAACGAAGGT+GGG + Chr5:75892733-75892752 None:intergenic 40.0%
CCATTCTCAGAAAGACACAA+TGG + Chr5:75893555-75893574 None:intergenic 40.0%
GAGAAATCTTCCATGTGTTC+CGG - Chr5:75893119-75893138 MsG0580028158.01.T01:CDS 40.0%
GTGATTATTGCGCTTGATCT+TGG - Chr5:75893276-75893295 MsG0580028158.01.T01:CDS 40.0%
TATTGCGCTTGATCTTGGTA+TGG - Chr5:75893281-75893300 MsG0580028158.01.T01:CDS 40.0%
! CCATTGTGTCTTTCTGAGAA+TGG - Chr5:75893552-75893571 MsG0580028158.01.T01:CDS 40.0%
! CTGAAGGTGTAATTCAACGA+AGG + Chr5:75892737-75892756 None:intergenic 40.0%
! GCCAATTATTGCAGTGTTGA+TGG - Chr5:75893362-75893381 MsG0580028158.01.T01:CDS 40.0%
! TAAAGTGCCTTTGCAAGTCT+TGG - Chr5:75892689-75892708 MsG0580028158.01.T01:CDS 40.0%
! TGCTTGGTCTTCATGACTAT+TGG + Chr5:75893595-75893614 None:intergenic 40.0%
!! GATCCTGATAGCTGATTTTG+AGG + Chr5:75893476-75893495 None:intergenic 40.0%
ACCAACTACTTCGCTGCAAT+CGG + Chr5:75892854-75892873 None:intergenic 45.0%
CAGATATATTCCCTGTGGCT+GGG + Chr5:75892951-75892970 None:intergenic 45.0%
GATGGCTCGATGCTTATTTG+CGG + Chr5:75892911-75892930 None:intergenic 45.0%
TAAAAAGATGATGCCCCCTC+CGG - Chr5:75893311-75893330 MsG0580028158.01.T01:CDS 45.0%
TCAGATATATTCCCTGTGGC+TGG + Chr5:75892952-75892971 None:intergenic 45.0%
TTAAACAAACCTCGCAAGCG+TGG - Chr5:75892985-75893004 MsG0580028158.01.T01:CDS 45.0%
! GAAGTAGTTGGTTCCTGCAA+TGG - Chr5:75892862-75892881 MsG0580028158.01.T01:CDS 45.0%
!! AGTTATAAGGTGGTGGGGTT+CGG - Chr5:75893054-75893073 MsG0580028158.01.T01:CDS 45.0%
!! CAAATAAGCATCGAGCCATC+TGG - Chr5:75892911-75892930 MsG0580028158.01.T01:CDS 45.0%
ACCGATTGCAGCGAAGTAGT+TGG - Chr5:75892850-75892869 MsG0580028158.01.T01:CDS 50.0%
ACTTCAATCTACGGCAGGCA+AGG + Chr5:75892828-75892847 None:intergenic 50.0%
ACTTGATCACAATCCGGAGG+GGG + Chr5:75893327-75893346 None:intergenic 50.0%
CAAACTATGCCCGCATTGTC+CGG + Chr5:75893141-75893160 None:intergenic 50.0%
CTTCAATCTACGGCAGGCAA+GGG + Chr5:75892827-75892846 None:intergenic 50.0%
GAAGGTGGGACTAGAGATGA+GGG + Chr5:75892719-75892738 None:intergenic 50.0%
GACTTGATCACAATCCGGAG+GGG + Chr5:75893328-75893347 None:intergenic 50.0%
GGACTTGATCACAATCCGGA+GGG + Chr5:75893329-75893348 None:intergenic 50.0%
GGGTGTTCCAAGACTTGCAA+AGG + Chr5:75892699-75892718 None:intergenic 50.0%
GGTGTACTTCAATCTACGGC+AGG + Chr5:75892833-75892852 None:intergenic 50.0%
GTTCCAAACACGGAACCAGA+TGG + Chr5:75892929-75892948 None:intergenic 50.0%
TCCATGTGTTCCGGACAATG+CGG - Chr5:75893128-75893147 MsG0580028158.01.T01:CDS 50.0%
! ACAATGCGGGCATAGTTTGC+TGG - Chr5:75893142-75893161 MsG0580028158.01.T01:CDS 50.0%
ATGCTAGATCCACGCTTGCG+AGG + Chr5:75892997-75893016 None:intergenic 55.0%
CCATGTGTTCCGGACAATGC+GGG - Chr5:75893129-75893148 MsG0580028158.01.T01:CDS 55.0%
CGAAGGTGGGACTAGAGATG+AGG + Chr5:75892720-75892739 None:intergenic 55.0%
CTGTGGCTGGGTTCCAAACA+CGG + Chr5:75892939-75892958 None:intergenic 55.0%
GGGACTTGATCACAATCCGG+AGG + Chr5:75893330-75893349 None:intergenic 55.0%
! GAGCCATCTGGTTCCGTGTT+TGG - Chr5:75892923-75892942 MsG0580028158.01.T01:CDS 55.0%
! GTGTTTGGAACCCAGCCACA+GGG - Chr5:75892938-75892957 MsG0580028158.01.T01:CDS 55.0%
CCCGCATTGTCCGGAACACA+TGG + Chr5:75893132-75893151 None:intergenic 60.0%
! CGTGTTTGGAACCCAGCCAC+AGG - Chr5:75892937-75892956 MsG0580028158.01.T01:CDS 60.0%
! GGTGGGGTTCGGTACTAGAG+AGG - Chr5:75893065-75893084 MsG0580028158.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 75892682 75893722 75892682 ID=MsG0580028158.01;Name=MsG0580028158.01
Chr5 mRNA 75892682 75893722 75892682 ID=MsG0580028158.01.T01;Parent=MsG0580028158.01;Name=MsG0580028158.01.T01;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|346
Chr5 exon 75892682 75893722 75892682 ID=MsG0580028158.01.T01:exon:15408;Parent=MsG0580028158.01.T01
Chr5 CDS 75892682 75893722 75892682 ID=MsG0580028158.01.T01:cds;Parent=MsG0580028158.01.T01
Gene Sequence

>MsG0580028158.01.T01

ATGCAACTAAAGTGCCTTTGCAAGTCTTGGAACACCCTCATCTCTAGTCCCACCTTCGTTGAATTACACCTTCAGCAATCACAACGAAAAAGGCAACTACTACTCTCATATGATGATCGTTTACTGAGTAACACATCAATCACCCTTGCCTGCCGTAGATTGAAGTACACCGATTGCAGCGAAGTAGTTGGTTCCTGCAATGGATTGATATGTTTGCTTGGACAGTCCGCAAATAAGCATCGAGCCATCTGGTTCCGTGTTTGGAACCCAGCCACAGGGAATATATCTGAAAAATTAGGATCTTTAAACAAACCTCGCAAGCGTGGATCTAGCATGCTCAGATACACATTTGGTTATGACATTTCAACTAAAAGTTATAAGGTGGTGGGGTTCGGTACTAGAGAGGTGAAAGTTTTCTGTTTGACTGATAATGTCTGGAGAAATCTTCCATGTGTTCCGGACAATGCGGGCATAGTTTGCTGGAACGACAATGTCAATAAAGGTGAGTATTTAAGTGGCACTATTAACTGGTTGGCTATTCAAAATTGCTTACAATGTGATAAATATTGTGAAAATATTTCTATTATGCGATTTGTGATTATTGCGCTTGATCTTGGTATGGAGACTTATAAAAAGATGATGCCCCCTCCGGATTGTGATCAAGTCCCATTTGTCATTGAGCCAATTATTGCAGTGTTGATGGACTGCCTTTGTTTTGCTCATCACTTCAGAACCGATTTTGTGATATGGAAGATGACACAATTTGGAGTCGAAAAGTCTTGGAGTCAATTCCTCAAAATCAGCTATCAGGATCTTCAAATTGACATTAGGTTTAATGAAAAAATGATTTATCATCCATTATTATTATCCCCATTGTGTCTTTCTGAGAATGGTGATAAACTGATATTGACCAATAGTCATGAAGACCAAGCAATTATCTACAACATTCGAGATAATAGAGTGGAGCTAACTAGAATTACCAATCCCATTGAATGGTTTCTTTCCAAAAATTATGTTGAAAGTTTGGTTCCAATTAGCTGA
Protein sequence

>MsG0580028158.01.T01

MQLKCLCKSWNTLISSPTFVELHLQQSQRKRQLLLSYDDRLLSNTSITLACRRLKYTDCSEVVGSCNGLICLLGQSANKHRAIWFRVWNPATGNISEKLGSLNKPRKRGSSMLRYTFGYDISTKSYKVVGFGTREVKVFCLTDNVWRNLPCVPDNAGIVCWNDNVNKGEYLSGTINWLAIQNCLQCDKYCENISIMRFVIIALDLGMETYKKMMPPPDCDQVPFVIEPIIAVLMDCLCFAHHFRTDFVIWKMTQFGVEKSWSQFLKISYQDLQIDIRFNEKMIYHPLLLSPLCLSENGDKLILTNSHEDQAIIYNIRDNRVELTRITNPIEWFLSKNYVESLVPIS*