AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018436.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018436.01.T01 MTR_4g011660 72.922 421 92 3 1 401 1 419 0.0 597
MsG0480018436.01.T01 MTR_7g022600 50.831 421 178 9 3 400 8 422 5.68e-130 380
MsG0480018436.01.T01 MTR_7g056760 50.985 406 181 7 4 400 9 405 7.09e-128 374
MsG0480018436.01.T01 MTR_7g056797 51.597 407 180 10 3 400 5 403 1.66e-126 371
MsG0480018436.01.T01 MTR_0128s0010 52.078 409 171 13 2 401 7 399 4.51e-126 370
MsG0480018436.01.T01 MTR_0128s0070 50.620 403 176 10 5 398 7 395 5.39e-122 359
MsG0480018436.01.T01 MTR_0128s0020 50.370 405 178 10 3 398 2 392 1.95e-120 355
MsG0480018436.01.T01 MTR_5g096710 49.874 397 174 10 15 401 19 400 8.56e-120 353
MsG0480018436.01.T01 MTR_1g071010 48.608 395 176 10 16 401 12 388 1.31e-119 353
MsG0480018436.01.T01 MTR_7g062100 50.623 401 179 11 7 401 11 398 5.96e-115 341
MsG0480018436.01.T01 MTR_7g022670 44.389 401 161 6 4 400 9 351 1.96e-103 310
MsG0480018436.01.T01 MTR_7g091630 43.552 411 194 10 19 401 32 432 6.62e-98 299
MsG0480018436.01.T01 MTR_5g069760 45.573 384 186 9 19 399 6 369 1.55e-97 296
MsG0480018436.01.T01 MTR_5g069930 43.264 386 197 9 19 398 6 375 7.55e-94 286
MsG0480018436.01.T01 MTR_7g061050 43.812 404 184 14 14 399 5 383 6.92e-92 282
MsG0480018436.01.T01 MTR_7g056290 41.509 424 202 11 9 400 12 421 7.98e-92 283
MsG0480018436.01.T01 MTR_7g057270 39.646 396 220 7 17 399 24 413 4.03e-91 281
MsG0480018436.01.T01 MTR_7g056503 40.587 409 209 10 7 400 9 398 4.55e-91 280
MsG0480018436.01.T01 MTR_1g442850 44.275 393 181 12 21 399 7 375 6.37e-91 279
MsG0480018436.01.T01 MTR_7g050480 40.831 409 203 12 6 398 3 388 2.69e-90 278
MsG0480018436.01.T01 MTR_2g010950 40.943 403 210 11 15 399 12 404 4.32e-90 278
MsG0480018436.01.T01 MTR_7g050520 40.831 409 203 12 6 398 3 388 6.89e-90 277
MsG0480018436.01.T01 MTR_7g056003 42.336 411 199 13 16 401 12 409 2.65e-89 276
MsG0480018436.01.T01 MTR_7g061090 41.928 415 200 13 7 399 10 405 5.04e-89 275
MsG0480018436.01.T01 MTR_7g056390 40.426 423 206 11 9 399 8 416 1.09e-88 275
MsG0480018436.01.T01 MTR_2g043410 42.032 433 187 16 9 401 10 418 1.36e-88 274
MsG0480018436.01.T01 MTR_7g062060 39.568 417 200 12 14 399 4 399 9.38e-87 269
MsG0480018436.01.T01 MTR_8g066440 42.308 416 198 12 8 401 8 403 3.47e-86 268
MsG0480018436.01.T01 MTR_7g060940 40.964 415 189 15 7 398 11 392 5.35e-86 267
MsG0480018436.01.T01 MTR_0464s0020 41.950 441 191 18 10 401 6 430 1.04e-85 267
MsG0480018436.01.T01 MTR_4g013185 39.627 429 208 11 14 399 5 425 1.26e-85 267
MsG0480018436.01.T01 MTR_7g052150 42.927 410 194 16 10 398 8 398 1.58e-85 266
MsG0480018436.01.T01 MTR_4g013180 42.175 377 192 8 19 382 11 374 2.79e-85 268
MsG0480018436.01.T01 MTR_7g055930 39.286 448 198 13 6 401 1 426 3.52e-85 266
MsG0480018436.01.T01 MTR_7g066100 38.971 408 213 11 13 400 3 394 5.49e-85 264
MsG0480018436.01.T01 MTR_6g055210 39.110 427 216 11 4 400 8 420 1.21e-84 265
MsG0480018436.01.T01 MTR_7g055870 39.462 446 200 14 6 401 1 426 4.81e-84 263
MsG0480018436.01.T01 MTR_7g078040 37.844 436 208 11 17 399 7 432 5.47e-83 260
MsG0480018436.01.T01 MTR_5g056020 40.092 434 213 12 1 400 1 421 5.87e-83 262
MsG0480018436.01.T01 MTR_7g061060 42.895 380 190 12 14 381 5 369 2.51e-82 258
MsG0480018436.01.T01 MTR_3g072470 39.953 423 210 11 9 400 9 418 2.61e-82 258
MsG0480018436.01.T01 MTR_2g010920 38.426 432 225 13 1 399 1 424 3.82e-82 258
MsG0480018436.01.T01 MTR_7g077070 38.837 430 224 13 6 399 3 429 5.52e-82 258
MsG0480018436.01.T01 MTR_7g056710 41.131 389 193 11 19 398 18 379 1.21e-81 255
MsG0480018436.01.T01 MTR_4g033495 40.609 394 205 13 17 397 25 402 1.59e-81 257
MsG0480018436.01.T01 MTR_1g088120 38.389 422 214 12 13 401 4 412 1.61e-81 256
MsG0480018436.01.T01 MTR_3g080370 41.750 400 185 11 33 400 35 418 2.57e-81 256
MsG0480018436.01.T01 MTR_2g043400 40.241 415 198 12 19 401 23 419 2.61e-81 256
MsG0480018436.01.T01 MTR_3g437520 41.388 418 188 16 10 384 6 409 7.00e-81 256
MsG0480018436.01.T01 MTR_4g030830 42.184 403 201 10 16 400 6 394 9.58e-81 253
MsG0480018436.01.T01 MTR_7g056570 41.688 391 200 12 15 399 14 382 2.18e-80 254
MsG0480018436.01.T01 MTR_7g078840 37.587 431 210 11 19 399 10 431 1.39e-79 251
MsG0480018436.01.T01 MTR_7g037670 41.397 401 155 12 3 399 8 332 2.15e-79 248
MsG0480018436.01.T01 MTR_7g055987 42.779 367 172 11 9 366 10 347 1.04e-78 247
MsG0480018436.01.T01 MTR_7g060960 40.000 410 174 13 5 398 13 366 3.18e-78 246
MsG0480018436.01.T01 MTR_0242s0060 37.470 419 212 10 19 398 9 416 4.31e-78 247
MsG0480018436.01.T01 MTR_0242s0040 37.470 419 212 10 19 398 9 416 4.31e-78 247
MsG0480018436.01.T01 MTR_7g066840 41.019 412 203 14 7 401 11 399 4.49e-78 247
MsG0480018436.01.T01 MTR_4g031020 38.215 437 216 12 7 400 3 428 1.00e-77 247
MsG0480018436.01.T01 MTR_6g016285 39.302 430 209 14 6 400 6 418 2.61e-77 246
MsG0480018436.01.T01 MTR_0649s0020 39.152 401 206 13 17 400 9 388 3.93e-77 244
MsG0480018436.01.T01 MTR_7g078900 37.237 427 216 13 16 399 5 422 7.70e-77 244
MsG0480018436.01.T01 MTR_7g056717 40.000 395 202 11 14 399 17 385 1.25e-76 243
MsG0480018436.01.T01 MTR_4g013175 40.500 400 198 10 14 381 5 396 1.66e-76 243
MsG0480018436.01.T01 MTR_7g056200 38.942 416 190 12 7 401 11 383 3.56e-76 241
MsG0480018436.01.T01 MTR_7g061010 41.422 408 188 14 12 398 9 386 4.32e-76 241
MsG0480018436.01.T01 MTR_7g066850 39.151 424 211 15 2 401 6 406 5.66e-76 243
MsG0480018436.01.T01 MTR_4g129190 38.614 404 205 13 19 399 6 389 7.98e-76 241
MsG0480018436.01.T01 MTR_4g019990 40.931 408 197 16 16 400 3 389 8.83e-76 240
MsG0480018436.01.T01 MTR_7g066030 39.952 418 205 15 5 400 10 403 1.18e-75 241
MsG0480018436.01.T01 MTR_4g024890 41.032 407 186 14 17 399 8 384 3.99e-75 239
MsG0480018436.01.T01 MTR_2g047892 39.950 403 206 12 13 400 16 397 5.19e-75 239
MsG0480018436.01.T01 MTR_7g079160 37.379 412 207 15 12 381 1 403 1.02e-74 240
MsG0480018436.01.T01 MTR_7g077970 36.706 425 217 12 18 399 6 421 1.30e-74 238
MsG0480018436.01.T01 MTR_4g030980 37.529 437 219 12 7 400 3 428 1.73e-74 238
MsG0480018436.01.T01 MTR_7g091640 42.593 324 162 9 19 329 35 347 6.06e-74 235
MsG0480018436.01.T01 MTR_7g056737 40.800 375 191 10 14 379 17 369 7.02e-74 236
MsG0480018436.01.T01 MTR_7g055977 39.130 391 211 11 19 399 7 380 2.55e-73 234
MsG0480018436.01.T01 MTR_5g068040 39.031 392 199 10 19 398 16 379 4.31e-73 233
MsG0480018436.01.T01 MTR_0707s0020 36.758 438 202 11 19 400 26 444 5.83e-73 235
MsG0480018436.01.T01 MTR_7g066000 38.425 419 208 14 4 398 9 401 6.15e-73 233
MsG0480018436.01.T01 MTR_6g086920 37.360 447 201 12 19 400 38 470 1.45e-72 235
MsG0480018436.01.T01 MTR_4g034860 39.510 367 174 11 46 384 49 395 5.23e-72 231
MsG0480018436.01.T01 MTR_7g113500 39.450 327 178 7 87 399 61 381 8.27e-72 230
MsG0480018436.01.T01 MTR_7g028660 38.480 408 196 15 13 399 5 378 1.19e-71 229
MsG0480018436.01.T01 MTR_2g010900 38.525 366 192 11 37 387 1 348 1.68e-71 229
MsG0480018436.01.T01 MTR_3g464470 38.500 400 210 13 16 401 4 381 1.49e-70 227
MsG0480018436.01.T01 MTR_6g092560 38.942 416 202 15 12 400 6 396 4.35e-70 228
MsG0480018436.01.T01 MTR_2g047878 39.848 394 185 15 14 400 16 364 5.57e-70 224
MsG0480018436.01.T01 MTR_3g464500 37.772 413 217 14 6 401 15 404 9.57e-70 225
MsG0480018436.01.T01 MTR_7g056260 42.991 321 153 10 19 326 14 317 7.51e-69 220
MsG0480018436.01.T01 MTR_5g043160 37.915 422 205 13 21 400 52 458 2.29e-68 223
MsG0480018436.01.T01 MTR_4g008790 36.512 430 207 8 12 396 26 434 3.06e-68 223
MsG0480018436.01.T01 MTR_1g029650 36.165 412 225 12 14 398 2 402 2.51e-67 219
MsG0480018436.01.T01 MTR_7g077990 35.492 417 214 14 6 396 3 390 2.82e-67 219
MsG0480018436.01.T01 MTR_7g078860 35.840 399 200 15 19 385 9 383 4.56e-67 218
MsG0480018436.01.T01 MTR_7g445890 36.634 404 200 8 19 401 16 384 1.53e-66 216
MsG0480018436.01.T01 MTR_4g030090 37.255 408 215 13 16 400 11 400 2.44e-66 216
MsG0480018436.01.T01 MTR_0097s0030 38.557 402 206 13 16 400 11 388 9.06e-66 214
MsG0480018436.01.T01 MTR_2g047240 38.557 402 206 13 16 400 11 388 9.06e-66 214
MsG0480018436.01.T01 MTR_2g047200 37.164 409 216 14 9 400 10 394 9.35e-66 214
MsG0480018436.01.T01 MTR_6g017280 35.484 403 218 10 19 401 9 389 2.08e-64 211
MsG0480018436.01.T01 MTR_7g070830 34.910 444 220 16 1 399 1 420 1.97e-63 209
MsG0480018436.01.T01 MTR_7g052670 36.195 431 218 13 14 400 8 425 3.11e-63 209
MsG0480018436.01.T01 MTR_7g056170 34.965 429 191 11 19 401 75 461 7.31e-63 209
MsG0480018436.01.T01 MTR_3g013470 37.105 380 183 9 38 388 14 366 1.55e-62 206
MsG0480018436.01.T01 MTR_4g030760 37.192 406 208 13 6 400 62 431 2.89e-61 204
MsG0480018436.01.T01 MTR_7g070880 34.685 444 221 17 1 399 1 420 4.14e-61 203
MsG0480018436.01.T01 MTR_7g055830 41.234 308 134 8 132 401 60 358 4.54e-61 201
MsG0480018436.01.T01 MTR_2g006360 38.182 385 158 14 22 398 49 361 2.32e-60 200
MsG0480018436.01.T01 MTR_2g461450 38.338 373 184 13 14 374 10 348 1.09e-59 197
MsG0480018436.01.T01 MTR_7g035295 36.139 404 199 12 19 401 16 381 2.10e-59 198
MsG0480018436.01.T01 MTR_1g112010 37.883 359 177 9 47 400 8 325 7.72e-58 192
MsG0480018436.01.T01 MTR_2g437110 35.680 412 215 14 10 400 11 393 8.59e-58 196
MsG0480018436.01.T01 MTR_1g015730 34.615 416 209 14 17 398 7 393 2.10e-57 193
MsG0480018436.01.T01 MTR_7g066010 35.071 422 195 17 2 400 5 370 2.11e-57 192
MsG0480018436.01.T01 MTR_6g017270 37.562 402 174 14 14 401 4 342 2.36e-57 191
MsG0480018436.01.T01 MTR_4g129160 38.315 368 190 15 16 357 4 360 8.57e-57 190
MsG0480018436.01.T01 MTR_7g009265 38.110 328 182 9 91 401 2 325 2.35e-55 186
MsG0480018436.01.T01 MTR_1g015740 33.167 401 168 12 17 398 6 325 2.77e-55 185
MsG0480018436.01.T01 MTR_7g445750 37.658 316 171 7 19 315 23 331 1.56e-54 184
MsG0480018436.01.T01 MTR_7g058630 50.262 191 83 2 211 401 3 181 2.81e-54 178
MsG0480018436.01.T01 MTR_7g077910 37.941 340 171 10 88 399 8 335 7.03e-54 182
MsG0480018436.01.T01 MTR_6g088385 39.716 282 128 8 145 400 54 319 1.36e-51 176
MsG0480018436.01.T01 MTR_7g056820 34.250 400 210 13 19 398 7 373 4.60e-51 176
MsG0480018436.01.T01 MTR_8g101940 35.835 413 188 17 19 400 2 368 5.33e-51 175
MsG0480018436.01.T01 MTR_7g066060 32.927 410 236 11 13 401 17 408 6.27e-51 179
MsG0480018436.01.T01 MTR_4g030110 33.498 406 205 14 6 385 16 382 7.81e-51 175
MsG0480018436.01.T01 MTR_7g066080 34.524 420 219 12 19 401 16 416 1.81e-50 176
MsG0480018436.01.T01 MTR_5g011350 44.053 227 98 7 88 305 40 246 3.20e-50 170
MsG0480018436.01.T01 MTR_7g006360 32.105 380 144 8 20 399 10 275 1.06e-49 170
MsG0480018436.01.T01 MTR_5g058620 38.686 274 142 6 151 400 11 282 4.42e-49 168
MsG0480018436.01.T01 MTR_1g058870 38.686 274 142 6 151 400 11 282 4.42e-49 168
MsG0480018436.01.T01 MTR_6g017305 40.511 274 136 8 148 401 17 283 4.61e-49 168
MsG0480018436.01.T01 MTR_6g065510 40.449 267 138 8 145 399 73 330 2.17e-48 167
MsG0480018436.01.T01 MTR_7g061940 44.495 218 101 7 158 370 64 266 2.66e-48 165
MsG0480018436.01.T01 MTR_6g017295 36.923 325 163 12 91 380 12 329 7.88e-48 171
MsG0480018436.01.T01 MTR_7g056173 40.562 249 126 6 167 398 22 265 9.74e-48 166
MsG0480018436.01.T01 MTR_7g055953 41.935 248 125 7 160 399 78 314 7.61e-47 163
MsG0480018436.01.T01 MTR_2g047895 35.294 323 161 10 93 393 8 304 1.13e-45 160
MsG0480018436.01.T01 MTR_2g010935 40.179 224 113 5 180 399 43 249 1.54e-45 157
MsG0480018436.01.T01 MTR_4g037465 30.569 422 239 15 1 398 1 392 6.27e-45 160
MsG0480018436.01.T01 MTR_7g078940 29.978 457 206 17 1 399 1 401 7.49e-45 160
MsG0480018436.01.T01 MTR_7g050490 44.175 206 93 7 12 213 1 188 1.24e-44 153
MsG0480018436.01.T01 MTR_0267s0050 32.412 398 235 12 16 398 4 382 2.34e-44 158
MsG0480018436.01.T01 MTR_7g078960 36.667 300 152 10 128 401 1 288 1.68e-43 153
MsG0480018436.01.T01 MTR_2g021150 31.620 389 232 13 15 399 10 368 7.32e-42 151
MsG0480018436.01.T01 MTR_4g030790 33.724 341 160 13 1 329 1 287 2.26e-41 149
MsG0480018436.01.T01 MTR_3g013950 31.250 400 239 12 16 398 4 384 3.35e-41 150
MsG0480018436.01.T01 MTR_2g060555 38.095 273 129 11 128 387 30 275 5.24e-41 147
MsG0480018436.01.T01 MTR_4g006350 28.465 404 245 12 17 398 492 873 9.51e-41 154
MsG0480018436.01.T01 MTR_7g034310 41.379 232 108 6 175 399 17 227 4.92e-40 142
MsG0480018436.01.T01 MTR_7g056023 34.754 305 126 9 19 307 30 277 6.54e-40 144
MsG0480018436.01.T01 MTR_7g070440 31.095 402 225 16 15 398 3 370 1.18e-39 145
MsG0480018436.01.T01 MTR_7g089830 51.316 152 50 4 231 372 6 143 1.52e-39 138
MsG0480018436.01.T01 MTR_2g029990 31.877 389 218 16 20 399 52 402 4.00e-39 145
MsG0480018436.01.T01 MTR_7g091610 41.011 178 96 1 233 401 71 248 2.14e-38 139
MsG0480018436.01.T01 MTR_6g081280 35.484 248 138 3 162 399 5 240 3.99e-38 138
MsG0480018436.01.T01 MTR_1g047490 31.975 319 146 9 19 313 22 293 1.47e-37 138
MsG0480018436.01.T01 MTR_1g097560 29.888 358 207 11 1 357 18 332 3.98e-37 139
MsG0480018436.01.T01 MTR_7g061100 39.033 269 102 12 14 271 5 222 4.68e-37 137
MsG0480018436.01.T01 MTR_1g097330 30.105 382 218 14 9 381 6 347 5.93e-37 139
MsG0480018436.01.T01 MTR_5g069950 37.321 209 108 5 139 344 28 216 1.57e-36 133
MsG0480018436.01.T01 MTR_2g027820 30.685 365 184 11 37 398 1 299 1.82e-36 135
MsG0480018436.01.T01 MTR_1g094210 29.851 402 236 16 2 399 39 398 1.10e-35 135
MsG0480018436.01.T01 MTR_1g094210 32.000 325 184 12 2 322 39 330 7.79e-35 133
MsG0480018436.01.T01 MTR_2g017720 34.000 250 140 6 157 395 61 296 9.06e-35 133
MsG0480018436.01.T01 MTR_3g055000 44.681 141 62 3 260 399 1 126 1.13e-34 125
MsG0480018436.01.T01 MTR_1g050542 30.730 397 223 17 14 399 49 404 3.56e-34 131
MsG0480018436.01.T01 MTR_2g021190 31.043 393 220 17 18 399 20 372 1.25e-33 129
MsG0480018436.01.T01 MTR_5g022420 29.781 366 214 12 8 370 16 341 1.81e-33 129
MsG0480018436.01.T01 MTR_2g046920 30.055 366 209 14 19 375 24 351 2.76e-33 128
MsG0480018436.01.T01 MTR_1g054575 32.484 314 175 10 14 319 42 326 3.21e-33 131
MsG0480018436.01.T01 MTR_7g021580 31.070 383 147 14 19 399 33 300 4.41e-33 126
MsG0480018436.01.T01 MTR_4g061340 29.377 337 180 13 12 327 19 318 2.33e-32 125
MsG0480018436.01.T01 MTR_3g009240 31.003 329 183 12 8 326 24 318 2.76e-32 125
MsG0480018436.01.T01 MTR_4g128320 34.008 247 125 7 145 381 42 260 3.72e-32 123
MsG0480018436.01.T01 MTR_7g407070 28.488 344 200 14 8 328 21 341 5.49e-32 125
MsG0480018436.01.T01 MTR_3g010390 29.187 418 228 18 8 399 22 397 7.38e-32 125
MsG0480018436.01.T01 MTR_3g014540 29.938 324 186 11 15 327 25 318 8.20e-32 124
MsG0480018436.01.T01 MTR_2g046830 28.906 384 226 15 19 390 25 373 1.30e-31 124
MsG0480018436.01.T01 MTR_2g046800 29.812 426 215 21 15 399 10 392 3.76e-31 123
MsG0480018436.01.T01 MTR_6g007135 31.347 386 235 17 20 399 28 389 5.52e-31 122
MsG0480018436.01.T01 MTR_3g007410 28.457 376 218 15 22 384 55 392 9.61e-31 122
MsG0480018436.01.T01 MTR_2g021155 30.287 383 215 17 11 383 30 370 1.11e-30 124
MsG0480018436.01.T01 MTR_2g021155 28.571 266 155 15 148 399 711 955 1.25e-12 70.1
MsG0480018436.01.T01 MTR_3g014570 30.120 332 191 12 14 334 24 325 1.35e-30 121
MsG0480018436.01.T01 MTR_3g007330 31.790 324 175 16 15 328 44 331 2.12e-30 120
MsG0480018436.01.T01 MTR_7g058660 51.818 110 48 1 291 395 101 210 2.26e-30 116
MsG0480018436.01.T01 MTR_7g058660 37.297 185 76 7 101 251 1 179 1.14e-20 90.1
MsG0480018436.01.T01 MTR_1g097490 30.203 394 216 16 16 399 46 390 2.83e-30 120
MsG0480018436.01.T01 MTR_3g013770 30.915 317 180 11 18 322 32 321 2.99e-30 120
MsG0480018436.01.T01 MTR_3g011060 29.610 385 210 19 8 370 17 362 3.67e-30 120
MsG0480018436.01.T01 MTR_4g024870 35.640 289 138 12 7 270 32 297 4.68e-30 120
MsG0480018436.01.T01 MTR_3g083640 28.429 401 248 13 2 399 38 402 4.74e-30 120
MsG0480018436.01.T01 MTR_3g007360 27.926 376 220 14 22 384 55 392 5.61e-30 120
MsG0480018436.01.T01 MTR_7g062070 46.094 128 63 4 263 387 75 199 8.82e-30 114
MsG0480018436.01.T01 MTR_7g030040 29.487 390 169 13 15 400 50 337 9.69e-30 118
MsG0480018436.01.T01 MTR_3g009310 28.977 352 197 11 14 345 37 355 1.09e-29 119
MsG0480018436.01.T01 MTR_8g101580 28.101 395 233 16 15 399 41 394 1.13e-29 119
MsG0480018436.01.T01 MTR_7g056793 34.061 229 104 7 173 398 46 230 1.37e-29 114
MsG0480018436.01.T01 MTR_3g011100 29.969 327 196 11 9 326 225 527 1.45e-29 120
MsG0480018436.01.T01 MTR_3g006570 27.363 402 245 13 9 399 11 376 1.55e-29 118
MsG0480018436.01.T01 MTR_2g021252 28.866 388 213 16 22 399 50 384 2.07e-29 118
MsG0480018436.01.T01 MTR_3g436150 28.824 340 198 13 8 328 21 335 2.37e-29 118
MsG0480018436.01.T01 MTR_7g022580 44.218 147 62 4 58 204 1 127 2.86e-29 112
MsG0480018436.01.T01 MTR_7g022580 58.929 56 23 0 345 400 113 168 2.40e-13 68.2
MsG0480018436.01.T01 MTR_6g053240 28.856 402 241 13 14 399 23 395 5.88e-29 117
MsG0480018436.01.T01 MTR_7g078050 40.523 153 79 4 17 169 4 144 1.35e-28 112
MsG0480018436.01.T01 MTR_4g107820 29.619 341 184 15 2 322 11 315 3.04e-28 114
MsG0480018436.01.T01 MTR_4g107780 29.619 341 184 15 2 322 11 315 3.04e-28 114
MsG0480018436.01.T01 MTR_2g047832 28.686 373 225 16 19 375 29 376 3.11e-28 115
MsG0480018436.01.T01 MTR_4g053470 26.542 373 189 11 2 364 6 303 3.61e-28 113
MsG0480018436.01.T01 MTR_4g107780 29.619 341 184 15 2 322 11 315 3.73e-28 115
MsG0480018436.01.T01 MTR_4g107820 29.619 341 184 15 2 322 11 315 4.07e-28 114
MsG0480018436.01.T01 MTR_6g027910 29.017 417 222 19 13 399 2 374 5.14e-28 114
MsG0480018436.01.T01 MTR_7g007300 28.822 399 224 19 12 399 96 445 5.68e-28 115
MsG0480018436.01.T01 MTR_5g057710 28.939 311 196 11 18 326 45 332 6.67e-28 114
MsG0480018436.01.T01 MTR_3g013740 29.692 357 208 13 10 344 35 370 6.86e-28 114
MsG0480018436.01.T01 MTR_4g020000 35.600 250 129 9 152 383 92 327 8.46e-28 113
MsG0480018436.01.T01 MTR_2g046900 30.500 400 216 19 19 399 28 384 1.38e-27 112
MsG0480018436.01.T01 MTR_4g108820 30.312 320 156 13 14 329 37 293 1.91e-27 111
MsG0480018436.01.T01 MTR_1g115160 27.654 405 225 15 14 399 11 366 2.07e-27 112
MsG0480018436.01.T01 MTR_2g055970 29.592 392 214 19 4 386 199 537 2.95e-27 114
MsG0480018436.01.T01 MTR_3g006670 29.573 328 179 15 12 322 42 334 3.60e-27 112
MsG0480018436.01.T01 MTR_3g030350 27.299 348 211 12 15 357 31 341 3.93e-27 111
MsG0480018436.01.T01 MTR_2g078900 28.919 370 202 14 2 357 16 338 4.28e-27 111
MsG0480018436.01.T01 MTR_3g009260 30.556 324 188 12 8 326 29 320 4.45e-27 111
MsG0480018436.01.T01 MTR_6g042600 40.764 157 81 3 246 395 169 320 4.47e-27 112
MsG0480018436.01.T01 MTR_7g055850 35.616 219 88 9 6 190 1 200 4.73e-27 109
MsG0480018436.01.T01 MTR_7g067680 28.704 324 182 10 4 322 34 313 5.37e-27 111
MsG0480018436.01.T01 MTR_0044s0300 26.615 387 245 9 18 399 37 389 7.34e-27 110
MsG0480018436.01.T01 MTR_3g007430 30.060 336 193 15 22 346 46 350 1.96e-26 109
MsG0480018436.01.T01 MTR_3g007270 28.531 354 206 13 13 343 41 370 2.04e-26 110
MsG0480018436.01.T01 MTR_8g030630 43.284 134 75 1 252 385 113 245 2.62e-26 110
MsG0480018436.01.T01 MTR_8g030630 36.313 179 93 4 200 377 282 440 7.46e-25 105
MsG0480018436.01.T01 MTR_3g011020 27.569 399 208 18 10 384 19 360 3.03e-26 108
MsG0480018436.01.T01 MTR_6g053260 28.109 402 229 17 19 399 337 699 5.05e-26 110
MsG0480018436.01.T01 MTR_3g036290 29.206 315 185 11 13 325 16 294 8.46e-26 107
MsG0480018436.01.T01 MTR_6g065980 28.040 403 216 17 15 399 12 358 1.24e-25 107
MsG0480018436.01.T01 MTR_8g467140 29.819 332 191 15 3 321 12 314 1.66e-25 106
MsG0480018436.01.T01 MTR_3g030310 29.338 317 196 9 18 328 20 314 1.85e-25 107
MsG0480018436.01.T01 MTR_4g031770 26.895 409 227 21 19 399 4 368 1.88e-25 106
MsG0480018436.01.T01 MTR_3g024110 26.238 404 232 13 12 399 94 447 2.08e-25 107
MsG0480018436.01.T01 MTR_2g043420 47.967 123 60 2 21 143 28 146 2.21e-25 101
MsG0480018436.01.T01 MTR_8g062660 29.878 328 170 15 19 322 22 313 5.17e-25 107
MsG0480018436.01.T01 MTR_1g055375 28.155 412 210 19 22 399 7 366 1.11e-24 104
MsG0480018436.01.T01 MTR_6g048120 32.653 343 182 17 6 329 23 335 1.52e-24 104
MsG0480018436.01.T01 MTR_7g066830 36.667 180 99 7 39 217 15 180 4.43e-24 98.6
MsG0480018436.01.T01 MTR_0064s0070 37.662 154 44 3 171 317 5 113 5.00e-24 96.3
MsG0480018436.01.T01 MTR_4g133170 26.667 360 198 13 17 357 2 314 6.37e-24 102
MsG0480018436.01.T01 MTR_3g036335 27.711 415 227 18 8 399 30 394 6.71e-24 102
MsG0480018436.01.T01 MTR_3g006530 26.700 397 237 12 18 399 39 396 8.26e-24 102
MsG0480018436.01.T01 MTR_3g010430 25.183 409 246 12 9 399 26 392 9.08e-24 102
MsG0480018436.01.T01 MTR_4g055060 27.811 338 188 14 13 325 16 322 1.09e-23 102
MsG0480018436.01.T01 MTR_3g024040 29.781 319 172 16 25 333 37 313 1.51e-23 101
MsG0480018436.01.T01 MTR_4g053510 43.750 128 66 4 2 129 6 127 1.52e-23 95.5
MsG0480018436.01.T01 MTR_5g057790 27.974 311 199 12 18 326 45 332 1.73e-23 101
MsG0480018436.01.T01 MTR_3g055070 40.984 122 55 3 260 380 1 106 2.32e-23 95.9
MsG0480018436.01.T01 MTR_3g010590 27.778 396 232 17 14 399 34 385 2.64e-23 100
MsG0480018436.01.T01 MTR_2g021210 28.642 405 235 16 1 399 68 424 3.08e-23 101
MsG0480018436.01.T01 MTR_6g013270 26.942 412 239 20 12 399 19 392 3.61e-23 100
MsG0480018436.01.T01 MTR_5g007610 27.059 340 191 13 9 326 34 338 3.80e-23 100
MsG0480018436.01.T01 MTR_7g013590 27.157 394 235 16 22 401 39 394 4.83e-23 100
MsG0480018436.01.T01 MTR_7g066040 35.678 199 97 7 101 271 1 196 5.46e-23 97.4
MsG0480018436.01.T01 MTR_4g024910 41.071 168 83 8 37 202 1 154 2.13e-22 97.4
MsG0480018436.01.T01 MTR_4g024910 39.831 118 67 2 283 398 149 264 7.13e-19 87.0
MsG0480018436.01.T01 MTR_7g056727 44.521 146 62 7 65 202 7 141 2.51e-22 95.1
MsG0480018436.01.T01 MTR_0064s0060 47.581 124 59 3 7 128 3 122 3.20e-22 92.4
MsG0480018436.01.T01 MTR_7g056723 44.444 126 63 4 95 218 10 130 5.86e-22 92.4
MsG0480018436.01.T01 MTR_2g028130 25.956 366 222 13 16 358 2 341 6.36e-22 97.1
MsG0480018436.01.T01 MTR_3g006500 25.628 398 236 17 18 399 16 369 6.41e-22 96.7
MsG0480018436.01.T01 MTR_2g028140 28.097 331 201 13 16 322 2 319 7.22e-22 97.1
MsG0480018436.01.T01 MTR_1g114700 27.027 407 237 17 12 399 22 387 7.25e-22 96.7
MsG0480018436.01.T01 MTR_1g112930 27.250 400 233 18 14 400 22 376 8.80e-22 96.3
MsG0480018436.01.T01 MTR_2g028160 26.075 372 216 14 16 358 2 343 9.76e-22 96.7
MsG0480018436.01.T01 MTR_3g030330 30.368 326 182 16 5 322 6 294 1.17e-21 95.9
MsG0480018436.01.T01 MTR_7g070900 36.207 174 62 5 173 329 235 376 1.85e-21 96.3
MsG0480018436.01.T01 MTR_8g073550 31.163 215 130 5 4 214 15 215 1.95e-21 92.8
MsG0480018436.01.T01 MTR_3g010870 25.564 399 238 19 14 399 32 384 2.42e-21 95.1
MsG0480018436.01.T01 MTR_1g054725 26.406 409 228 20 15 399 16 375 2.70e-21 94.7
MsG0480018436.01.T01 MTR_7g078880 28.384 229 118 5 195 396 102 311 2.74e-21 95.1
MsG0480018436.01.T01 MTR_8g099460 26.269 335 182 12 16 322 2 299 3.94e-21 94.7
MsG0480018436.01.T01 MTR_6g004660 26.173 405 235 18 19 399 16 380 4.75e-21 94.4
MsG0480018436.01.T01 MTR_0128s0110 31.604 212 122 7 199 398 2 202 6.49e-21 90.5
MsG0480018436.01.T01 MTR_3g009300 32.093 215 114 10 122 326 98 290 7.32e-21 93.2
MsG0480018436.01.T01 MTR_5g057690 26.266 316 188 13 18 326 45 322 9.00e-21 93.6
MsG0480018436.01.T01 MTR_8g069515 37.725 167 86 8 12 169 11 168 1.04e-20 89.4
MsG0480018436.01.T01 MTR_3g010920 26.585 410 232 19 4 399 27 381 1.09e-20 93.2
MsG0480018436.01.T01 MTR_3g036430 26.020 392 212 16 18 399 19 342 1.25e-20 92.4
MsG0480018436.01.T01 MTR_5g046300 26.000 400 231 20 14 399 2 350 1.54e-20 92.4
MsG0480018436.01.T01 MTR_5g046290 26.000 400 231 20 14 399 2 350 1.54e-20 92.4
MsG0480018436.01.T01 MTR_5g070380 36.620 142 71 4 21 159 25 150 1.63e-20 88.6
MsG0480018436.01.T01 MTR_3g030250 26.396 394 228 17 18 399 36 379 1.64e-20 92.8
MsG0480018436.01.T01 MTR_2g426070 26.944 360 215 13 20 358 7 339 2.30e-20 92.4
MsG0480018436.01.T01 MTR_5g011200 25.000 408 235 17 15 398 13 373 2.54e-20 92.0
MsG0480018436.01.T01 MTR_3g011650 31.513 238 133 8 9 243 71 281 3.12e-20 90.5
MsG0480018436.01.T01 MTR_0760s0010 27.557 352 177 15 24 344 52 356 5.39e-20 91.3
MsG0480018436.01.T01 MTR_3g010440 23.155 393 211 9 14 400 21 328 7.79e-20 90.1
MsG0480018436.01.T01 MTR_2g426060 25.205 365 216 12 19 358 6 338 9.42e-20 90.9
MsG0480018436.01.T01 MTR_1g046600 34.356 163 80 4 44 190 72 223 9.55e-20 89.4
MsG0480018436.01.T01 MTR_1g016960 28.438 320 136 13 84 398 23 254 1.71e-19 87.8
MsG0480018436.01.T01 MTR_5g009060 28.446 341 184 16 18 322 24 340 1.97e-19 89.7
MsG0480018436.01.T01 MTR_3g030240 24.515 412 242 17 2 399 21 377 3.44e-19 89.0
MsG0480018436.01.T01 MTR_3g024150 27.653 311 181 11 22 322 38 314 4.32e-19 88.6
MsG0480018436.01.T01 MTR_2g021050 25.137 366 196 15 16 358 2 312 4.37e-19 88.6
MsG0480018436.01.T01 MTR_8g030660 29.536 237 123 7 16 218 24 250 4.71e-19 86.7
MsG0480018436.01.T01 MTR_2g426020 25.275 364 210 13 19 358 6 331 1.04e-18 87.8
MsG0480018436.01.T01 MTR_3g009250 31.092 238 138 8 8 243 29 242 1.18e-18 85.1
MsG0480018436.01.T01 MTR_3g083010 26.277 411 250 18 19 399 6 393 1.21e-18 87.4
MsG0480018436.01.T01 MTR_2g078870 28.521 284 165 12 122 399 56 307 1.45e-18 85.9
MsG0480018436.01.T01 MTR_5g057020 25.080 311 193 11 18 326 45 317 1.49e-18 86.7
MsG0480018436.01.T01 MTR_6g021880 25.781 384 236 16 31 399 32 381 2.45e-18 86.3
MsG0480018436.01.T01 MTR_3g010520 25.908 413 228 19 3 399 9 359 2.56e-18 85.9
MsG0480018436.01.T01 MTR_7g070937 39.370 127 62 3 173 284 10 136 5.96e-18 81.3
MsG0480018436.01.T01 MTR_3g023930 25.570 395 229 14 14 399 29 367 7.04e-18 84.7
MsG0480018436.01.T01 MTR_2g078850 27.704 379 213 18 22 383 33 367 8.88e-18 84.7
MsG0480018436.01.T01 MTR_3g058440 31.095 283 165 11 10 283 26 287 1.22e-17 83.2
MsG0480018436.01.T01 MTR_6g048140 29.052 327 188 15 14 326 33 329 1.60e-17 84.0
MsG0480018436.01.T01 MTR_3g007300 26.888 331 166 13 8 326 38 304 1.71e-17 83.6
MsG0480018436.01.T01 MTR_4g070550 27.027 333 196 14 16 322 2 313 2.05e-17 84.0
MsG0480018436.01.T01 MTR_5g057040 31.156 199 124 7 18 215 45 231 2.21e-17 84.7
MsG0480018436.01.T01 MTR_6g004210 25.854 410 236 20 29 399 35 415 2.27e-17 83.6
MsG0480018436.01.T01 MTR_6g014720 26.065 399 237 19 13 399 22 374 2.54e-17 83.2
MsG0480018436.01.T01 MTR_3g024130 26.906 223 134 7 120 333 57 259 2.92e-17 82.4
MsG0480018436.01.T01 MTR_3g010620 26.478 423 235 22 4 399 19 392 3.64e-17 82.8
MsG0480018436.01.T01 MTR_6g460450 40.650 123 60 4 11 129 23 136 3.82e-17 78.2
MsG0480018436.01.T01 MTR_2g025420 26.888 331 201 13 18 322 5 320 7.36e-17 82.4
MsG0480018436.01.T01 MTR_1g068860 25.000 332 183 12 19 325 4 294 7.59e-17 82.0
MsG0480018436.01.T01 MTR_4g063955 34.409 186 109 5 7 189 15 190 7.87e-17 80.5
MsG0480018436.01.T01 MTR_1g115185 26.617 402 241 19 1 385 16 380 8.96e-17 82.0
MsG0480018436.01.T01 MTR_3g058470 25.248 404 210 15 19 399 37 371 1.02e-16 81.6
MsG0480018436.01.T01 MTR_1g068835 26.087 322 190 12 19 325 4 292 1.41e-16 81.3
MsG0480018436.01.T01 MTR_5g057643 30.303 198 125 7 18 214 45 230 1.77e-16 79.3
MsG0480018436.01.T01 MTR_6g007150 28.485 330 185 15 90 399 39 337 2.32e-16 80.1
MsG0480018436.01.T01 MTR_7g445580 39.091 110 61 3 269 378 42 145 3.07e-16 75.9
MsG0480018436.01.T01 MTR_1g056710 24.279 416 235 17 11 399 26 388 3.12e-16 80.1
MsG0480018436.01.T01 MTR_2g426090 26.462 325 190 15 22 322 9 308 3.69e-16 80.1
MsG0480018436.01.T01 MTR_3g006640 26.452 310 162 13 122 400 19 293 4.21e-16 78.6
MsG0480018436.01.T01 MTR_3g010970 28.296 311 170 14 22 322 51 318 4.64e-16 79.7
MsG0480018436.01.T01 MTR_3g058480 30.035 283 159 12 6 273 24 282 5.54e-16 79.0
MsG0480018436.01.T01 MTR_2g031720 26.316 361 204 18 19 358 6 325 1.21e-15 78.6
MsG0480018436.01.T01 MTR_4g121580 27.626 257 133 11 10 242 2 229 1.57e-15 78.2
MsG0480018436.01.T01 MTR_2g031680 23.867 331 185 12 16 322 3 290 1.78e-15 77.8
MsG0480018436.01.T01 MTR_3g009290 30.268 261 144 11 13 267 29 257 1.91e-15 76.3
MsG0480018436.01.T01 MTR_2g028110 23.739 337 183 11 17 322 2 295 2.05e-15 77.8
MsG0480018436.01.T01 MTR_1g055070 28.522 291 162 12 6 273 36 303 3.16e-15 77.0
MsG0480018436.01.T01 MTR_2g425980 25.135 370 217 16 16 358 2 338 7.44e-15 76.3
MsG0480018436.01.T01 MTR_1g055135 26.748 329 194 14 19 330 13 311 8.11e-15 75.9
MsG0480018436.01.T01 MTR_1g068875 24.458 323 197 11 17 325 2 291 8.75e-15 75.9
MsG0480018436.01.T01 MTR_4g023080 25.758 396 221 17 19 399 9 346 1.08e-14 75.1
MsG0480018436.01.T01 MTR_3g023940 27.737 411 208 19 18 399 33 383 1.10e-14 75.5
MsG0480018436.01.T01 MTR_3g030320 28.372 215 123 8 118 326 40 229 1.63e-14 73.9
MsG0480018436.01.T01 MTR_2g024110 24.176 364 208 14 17 358 2 319 2.18e-14 74.3
MsG0480018436.01.T01 MTR_5g046260 24.845 322 165 15 14 326 2 255 3.88e-14 72.8
MsG0480018436.01.T01 MTR_4g023090 24.010 404 241 14 19 399 16 376 9.38e-14 72.8
MsG0480018436.01.T01 MTR_4g013190 43.210 81 41 2 85 163 41 118 1.05e-13 67.8
MsG0480018436.01.T01 MTR_7g060930 48.438 64 33 0 249 312 15 78 1.43e-13 66.2
MsG0480018436.01.T01 MTR_4g117850 26.036 338 200 15 14 337 20 321 1.81e-13 71.6
MsG0480018436.01.T01 MTR_7g056373 38.095 105 64 1 9 113 12 115 2.15e-13 67.0
MsG0480018436.01.T01 MTR_6g027890 27.213 305 163 17 121 399 53 324 2.35e-13 70.9
MsG0480018436.01.T01 MTR_2g046860 27.820 266 153 13 121 375 7 244 2.96e-13 70.5
MsG0480018436.01.T01 MTR_4g006840 29.457 258 128 10 22 267 2 217 3.07e-13 69.3
MsG0480018436.01.T01 MTR_6g048150 39.583 96 50 3 306 396 13 105 3.74e-13 66.6
MsG0480018436.01.T01 MTR_1g058190 25.726 241 142 11 175 398 149 369 4.08e-13 70.5
MsG0480018436.01.T01 MTR_1g097370 28.311 219 129 12 165 370 126 329 5.04e-13 70.9
MsG0480018436.01.T01 MTR_5g046280 26.042 288 164 15 124 399 3 253 6.16e-13 68.6
MsG0480018436.01.T01 MTR_4g023070 24.860 358 212 17 19 356 3 323 8.62e-13 69.7
MsG0480018436.01.T01 MTR_0354s0030 39.394 99 52 2 309 401 1 97 1.06e-12 64.3
MsG0480018436.01.T01 MTR_5g070130 24.850 334 202 15 19 333 11 314 1.14e-12 69.3
MsG0480018436.01.T01 MTR_5g027330 25.635 394 235 19 2 369 22 383 1.60e-12 69.3
MsG0480018436.01.T01 MTR_4g109270 23.678 397 239 17 19 399 8 356 1.72e-12 68.6
MsG0480018436.01.T01 MTR_5g027370 25.558 403 242 19 2 378 11 381 2.15e-12 68.6
MsG0480018436.01.T01 MTR_2g079810 26.493 268 155 10 19 272 7 246 2.36e-12 67.8
MsG0480018436.01.T01 MTR_1004s0010 27.686 242 120 12 124 344 119 326 2.43e-12 68.2
MsG0480018436.01.T01 MTR_4g030880 31.313 198 94 7 192 385 42 201 2.68e-12 68.6
MsG0480018436.01.T01 MTR_3g007380 33.333 141 70 5 22 158 33 153 3.62e-12 66.2
MsG0480018436.01.T01 MTR_0627s0010 24.862 362 173 15 19 322 38 358 4.13e-12 67.8
MsG0480018436.01.T01 MTR_3g010870 29.384 211 120 9 14 217 32 220 4.14e-12 67.0
MsG0480018436.01.T01 MTR_3g010450 32.090 268 136 16 25 283 3 233 5.96e-12 65.9
MsG0480018436.01.T01 MTR_3g096280 26.234 385 209 18 31 399 17 342 6.76e-12 66.6
MsG0480018436.01.T01 MTR_1g113900 29.004 231 132 11 175 399 41 245 7.14e-12 65.5
MsG0480018436.01.T01 MTR_6g046320 24.725 364 186 15 19 322 39 374 7.54e-12 67.0
MsG0480018436.01.T01 MTR_2g031640 26.300 327 181 16 18 322 5 293 8.92e-12 66.6
MsG0480018436.01.T01 MTR_2g025960 25.909 220 138 9 120 322 2 213 1.07e-11 65.9
MsG0480018436.01.T01 MTR_2g026010 24.044 366 210 14 17 358 2 323 1.24e-11 66.2
MsG0480018436.01.T01 MTR_4g023120 25.552 317 187 14 19 320 3 285 1.48e-11 65.9
MsG0480018436.01.T01 MTR_7g077930 49.254 67 30 2 6 69 3 68 1.61e-11 60.8
MsG0480018436.01.T01 MTR_3g083660 25.862 232 141 10 175 401 77 282 2.21e-11 64.7
MsG0480018436.01.T01 MTR_3g034130 27.149 221 103 8 19 214 9 196 3.68e-11 64.7
MsG0480018436.01.T01 MTR_4g094365 28.163 245 151 10 19 260 8 230 8.84e-11 63.5
MsG0480018436.01.T01 MTR_5g023570 34.454 119 65 4 13 131 31 136 9.00e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018436.01.T01 AT3G06240 26.712 438 226 18 11 399 28 419 1.26e-23 102
MsG0480018436.01.T01 AT3G23880 25.134 374 212 15 19 375 14 336 9.01e-15 75.5
MsG0480018436.01.T01 AT3G08750 25.926 270 141 13 18 274 11 234 1.57e-11 65.9
MsG0480018436.01.T01 AT5G10340 25.323 387 236 17 19 376 69 431 2.75e-11 65.5

Find 73 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGACAATATCTGATAAATT+AGG 0.196245 4:+4879257 MsG0480018436.01.T01:CDS
CTTTAGGAATGGTGATATTA+TGG 0.203126 4:-4879091 None:intergenic
CACTTATAAGGTTGTGGCCT+TGG 0.238258 4:+4879349 MsG0480018436.01.T01:CDS
TGAATGAAAGATGAGAAATT+AGG 0.253016 4:-4878941 None:intergenic
TCTATGCTAACGATCGTATA+TGG 0.263832 4:+4879285 MsG0480018436.01.T01:CDS
AAACGGTAGTAAGGATCTTT+AGG 0.264146 4:-4879107 None:intergenic
ATATGGAAGATGGAAGAATT+TGG 0.310226 4:+4879713 MsG0480018436.01.T01:CDS
TAATTCAACTAACACTTATA+AGG 0.333297 4:+4879337 MsG0480018436.01.T01:CDS
GGACAATATCTGATAAATTA+GGG 0.343831 4:+4879258 MsG0480018436.01.T01:CDS
ACCGTGCAATTCTCTATAAC+TGG 0.345347 4:+4879888 MsG0480018436.01.T01:CDS
TGCTGACGGCGGTGATTGTT+TGG 0.345924 4:-4878826 None:intergenic
GAATGAAAGATGAGAAATTA+GGG 0.346934 4:-4878940 None:intergenic
TCAGATATTGTCCTTGTGGC+AGG 0.363535 4:-4879248 None:intergenic
AAAGATTGTTGCGCGGTTGT+TGG 0.364009 4:+4879143 MsG0480018436.01.T01:CDS
AAATTTAGCTATCAGAATCT+TGG 0.372419 4:+4879764 MsG0480018436.01.T01:CDS
TTAGTTTCGGTGATAATGTT+TGG 0.377045 4:+4879405 MsG0480018436.01.T01:CDS
TGAAATCAGTATGTAAGAAA+TGG 0.387018 4:+4878913 MsG0480018436.01.T01:CDS
CAGTTATGTGGCTCCGTTTG+TGG 0.396117 4:+4879222 MsG0480018436.01.T01:CDS
TGGAAGCAAGTATAGGATTT+CGG 0.410507 4:-4878871 None:intergenic
GTCAACCTCCTAGCCGCAAC+AGG 0.424543 4:-4879446 None:intergenic
AATTATAAATTTGAACTTGG+TGG 0.437178 4:+4879791 MsG0480018436.01.T01:CDS
TATTCAAAATTTACCTGTTG+CGG 0.439439 4:+4879433 MsG0480018436.01.T01:CDS
AAATAGTAAAGATAAGAGTA+TGG 0.456272 4:-4879002 None:intergenic
ATGAATTATAAATTTGAACT+TGG 0.463981 4:+4879788 MsG0480018436.01.T01:CDS
TGTTGGTTCTTGCAATGGAT+TGG 0.468912 4:+4879160 MsG0480018436.01.T01:CDS
ATTTGACTGGAAGCAAGTAT+AGG 0.469466 4:-4878878 None:intergenic
AACTAACACTTATAAGGTTG+TGG 0.470385 4:+4879343 MsG0480018436.01.T01:CDS
AACATTATTATCATTCGAAA+CGG 0.483340 4:-4879531 None:intergenic
AATTTGGAAATGAAAAGTCT+TGG 0.488667 4:+4879729 MsG0480018436.01.T01:CDS
TTCAACATATCTCCACAGAT+TGG 0.497165 4:+4879023 MsG0480018436.01.T01:CDS
GAACCGTTCCGATGAGTTCA+CGG 0.497583 4:+4878787 None:intergenic
GTCAGCAACCCTCCCGGACG+AGG 0.500627 4:+4878842 MsG0480018436.01.T01:CDS
CAGATATTGTCCTTGTGGCA+GGG 0.508146 4:-4879247 None:intergenic
TTGTGGCAGGGTTCCACAAA+CGG 0.510167 4:-4879235 None:intergenic
ACACAGTTGCTTCCTCCTCC+AGG 0.520110 4:+4879599 MsG0480018436.01.T01:CDS
ATTTCGGTGAGAACCTCGTC+CGG 0.523210 4:-4878855 None:intergenic
AAAATTTACCTGTTGCGGCT+AGG 0.527613 4:+4879438 MsG0480018436.01.T01:CDS
TGATTCTCAGAAAGATGTAA+TGG 0.534747 4:-4879833 None:intergenic
GAACGATTATGCTGAAAGCT+TGG 0.534877 4:+4879967 MsG0480018436.01.T01:CDS
GACAGTAGAACTAAAATGTA+CGG 0.535135 4:-4879495 None:intergenic
GCGGTTGTTGGTTCTTGCAA+TGG 0.536677 4:+4879155 MsG0480018436.01.T01:CDS
AGTAAATGATTAACAGGGAA+GGG 0.548668 4:-4879062 None:intergenic
ATCTGAATTAGAGATTTGAC+TGG 0.551546 4:-4878891 None:intergenic
ACCGCCGTCAGCAACCCTCC+CGG 0.567747 4:+4878836 MsG0480018436.01.T01:CDS
TTTATCAGATATTGTCCTTG+TGG 0.568388 4:-4879252 None:intergenic
TGTGCCACCTTCTCATAACC+TGG 0.568448 4:-4879617 None:intergenic
AAGTAAATGATTAACAGGGA+AGG 0.569208 4:-4879063 None:intergenic
ATCAACATCATCAAAATCCA+AGG 0.573725 4:-4879366 None:intergenic
GGTGAGAACCTCGTCCGGGA+GGG 0.573914 4:-4878850 None:intergenic
TTTCGGTGAGAACCTCGTCC+GGG 0.574708 4:-4878854 None:intergenic
TCCTCCTCCAGGTTATGAGA+AGG 0.575150 4:+4879610 MsG0480018436.01.T01:CDS
ATTTACCTGTTGCGGCTAGG+AGG 0.586382 4:+4879441 MsG0480018436.01.T01:CDS
AAAATGTACTTACCAATCTG+TGG 0.589173 4:-4879035 None:intergenic
TCGTCCGGGAGGGTTGCTGA+CGG 0.589404 4:-4878840 None:intergenic
AATGGATTGGTCTGCTTATG+CGG 0.590719 4:+4879173 MsG0480018436.01.T01:CDS
ATGAGGATAAAACAGTTATG+TGG 0.599397 4:+4879210 MsG0480018436.01.T01:CDS
GAATCATGATACAGTGGTGT+TGG 0.601230 4:+4879850 MsG0480018436.01.T01:CDS
ACCTTCTCATAACCTGGAGG+AGG 0.601852 4:-4879611 None:intergenic
TCCTCCAGGTTATGAGAAGG+TGG 0.608213 4:+4879613 MsG0480018436.01.T01:CDS
CGGAGACGCCGTGAACTCAT+CGG 0.608670 4:-4878795 None:intergenic
CGGTGAGAACCTCGTCCGGG+AGG 0.612026 4:-4878851 None:intergenic
GTAGTAAGGATCTTTAGGAA+TGG 0.614180 4:-4879102 None:intergenic
TCCAGTTATAGAGAATTGCA+CGG 0.617654 4:-4879889 None:intergenic
GTGATTGTTTGGAATGAGAG+CGG 0.619631 4:-4878815 None:intergenic
TCCGGGAGGGTTGCTGACGG+CGG 0.623443 4:-4878837 None:intergenic
GAATTAACAACAACATACGT+TGG 0.628793 4:+4879936 MsG0480018436.01.T01:CDS
CGGTTCTACTTACGACAATG+AGG 0.638113 4:+4879193 MsG0480018436.01.T01:CDS
TTCGTCAACACACAAACACT+CGG 0.642404 4:-4879647 None:intergenic
GTTTGTGGAACCCTGCCACA+AGG 0.655368 4:+4879237 MsG0480018436.01.T01:CDS
TTCTGAGAATCATGATACAG+TGG 0.657628 4:+4879844 MsG0480018436.01.T01:CDS
TTTCAAGTAAATGATTAACA+GGG 0.684894 4:-4879067 None:intergenic
CGACGATAAAGATTGTTGCG+CGG 0.710022 4:+4879136 MsG0480018436.01.T01:CDS
GCCACCTTCTCATAACCTGG+AGG 0.717287 4:-4879614 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAATTATAAATTTGAACT+TGG + Chr4:4879788-4879807 MsG0480018436.01.T01:CDS 15.0%
!!! TTTTTGGATTTAAGAATATA+TGG + Chr4:4879470-4879489 MsG0480018436.01.T01:CDS 15.0%
!! AAATAGTAAAGATAAGAGTA+TGG - Chr4:4879005-4879024 None:intergenic 20.0%
!! AACATTATTATCATTCGAAA+CGG - Chr4:4879534-4879553 None:intergenic 20.0%
!! AATTATAAATTTGAACTTGG+TGG + Chr4:4879791-4879810 MsG0480018436.01.T01:CDS 20.0%
!! TAATTCAACTAACACTTATA+AGG + Chr4:4879337-4879356 MsG0480018436.01.T01:CDS 20.0%
!!! TGTTTTTATCATGATTATGA+GGG + Chr4:4879677-4879696 MsG0480018436.01.T01:CDS 20.0%
!!! TTGTTTTTATCATGATTATG+AGG + Chr4:4879676-4879695 MsG0480018436.01.T01:CDS 20.0%
!!! TTTCAAGTAAATGATTAACA+GGG - Chr4:4879070-4879089 None:intergenic 20.0%
!!! TTTTCAAGTAAATGATTAAC+AGG - Chr4:4879071-4879090 None:intergenic 20.0%
! AAATTTAGCTATCAGAATCT+TGG + Chr4:4879764-4879783 MsG0480018436.01.T01:CDS 25.0%
! AATTTGGAAATGAAAAGTCT+TGG + Chr4:4879729-4879748 MsG0480018436.01.T01:CDS 25.0%
! AGGACAATATCTGATAAATT+AGG + Chr4:4879257-4879276 MsG0480018436.01.T01:CDS 25.0%
! GAATGAAAGATGAGAAATTA+GGG - Chr4:4878943-4878962 None:intergenic 25.0%
! GGACAATATCTGATAAATTA+GGG + Chr4:4879258-4879277 MsG0480018436.01.T01:CDS 25.0%
! TATTCAAAATTTACCTGTTG+CGG + Chr4:4879433-4879452 MsG0480018436.01.T01:CDS 25.0%
! TGAAATCAGTATGTAAGAAA+TGG + Chr4:4878913-4878932 MsG0480018436.01.T01:CDS 25.0%
! TGAATGAAAGATGAGAAATT+AGG - Chr4:4878944-4878963 None:intergenic 25.0%
!! GTTTTTATCATGATTATGAG+GGG + Chr4:4879678-4879697 MsG0480018436.01.T01:CDS 25.0%
!!! ATTTTAGTTCTACTGTCAAT+TGG + Chr4:4879501-4879520 MsG0480018436.01.T01:CDS 25.0%
!!! CTGATTTTTTCGCTTTATTT+AGG + Chr4:4879563-4879582 MsG0480018436.01.T01:CDS 25.0%
!!! CTTTATCGTCGTTTTTTAAA+CGG - Chr4:4879127-4879146 None:intergenic 25.0%
!!! TGATTTTGTTATATGGAAGA+TGG + Chr4:4879703-4879722 MsG0480018436.01.T01:CDS 25.0%
!!! TTTTAGTTCTACTGTCAATT+GGG + Chr4:4879502-4879521 MsG0480018436.01.T01:CDS 25.0%
AAAATGTACTTACCAATCTG+TGG - Chr4:4879038-4879057 None:intergenic 30.0%
AACTAACACTTATAAGGTTG+TGG + Chr4:4879343-4879362 MsG0480018436.01.T01:CDS 30.0%
AAGTAAATGATTAACAGGGA+AGG - Chr4:4879066-4879085 None:intergenic 30.0%
AGTAAATGATTAACAGGGAA+GGG - Chr4:4879065-4879084 None:intergenic 30.0%
ATATGGAAGATGGAAGAATT+TGG + Chr4:4879713-4879732 MsG0480018436.01.T01:CDS 30.0%
ATCAACATCATCAAAATCCA+AGG - Chr4:4879369-4879388 None:intergenic 30.0%
ATCTGAATTAGAGATTTGAC+TGG - Chr4:4878894-4878913 None:intergenic 30.0%
ATGAGGATAAAACAGTTATG+TGG + Chr4:4879210-4879229 MsG0480018436.01.T01:CDS 30.0%
GAATTAACAACAACATACGT+TGG + Chr4:4879936-4879955 MsG0480018436.01.T01:CDS 30.0%
GACAGTAGAACTAAAATGTA+CGG - Chr4:4879498-4879517 None:intergenic 30.0%
TGATTCTCAGAAAGATGTAA+TGG - Chr4:4879836-4879855 None:intergenic 30.0%
TTTATCAGATATTGTCCTTG+TGG - Chr4:4879255-4879274 None:intergenic 30.0%
! CTTTAGGAATGGTGATATTA+TGG - Chr4:4879094-4879113 None:intergenic 30.0%
! TTAGTTTCGGTGATAATGTT+TGG + Chr4:4879405-4879424 MsG0480018436.01.T01:CDS 30.0%
!!! GAGGTGAAAGTTTTTAGTTT+CGG + Chr4:4879392-4879411 MsG0480018436.01.T01:CDS 30.0%
!!! TCGTTTTTTAAACGGTAGTA+AGG - Chr4:4879119-4879138 None:intergenic 30.0%
!!! TGGATTTTGATGATGTTGAT+GGG + Chr4:4879369-4879388 MsG0480018436.01.T01:CDS 30.0%
!!! TTGGATTTTGATGATGTTGA+TGG + Chr4:4879368-4879387 MsG0480018436.01.T01:CDS 30.0%
AAACGGTAGTAAGGATCTTT+AGG - Chr4:4879110-4879129 None:intergenic 35.0%
ATTTGACTGGAAGCAAGTAT+AGG - Chr4:4878881-4878900 None:intergenic 35.0%
TCCAGTTATAGAGAATTGCA+CGG - Chr4:4879892-4879911 None:intergenic 35.0%
TCTATGCTAACGATCGTATA+TGG + Chr4:4879285-4879304 MsG0480018436.01.T01:CDS 35.0%
TGGAAGCAAGTATAGGATTT+CGG - Chr4:4878874-4878893 None:intergenic 35.0%
TTCAACATATCTCCACAGAT+TGG + Chr4:4879023-4879042 MsG0480018436.01.T01:CDS 35.0%
! GTAGTAAGGATCTTTAGGAA+TGG - Chr4:4879105-4879124 None:intergenic 35.0%
! TTCTGAGAATCATGATACAG+TGG + Chr4:4879844-4879863 MsG0480018436.01.T01:CDS 35.0%
!! AGGGGACTGATTTTGTTATA+TGG + Chr4:4879696-4879715 MsG0480018436.01.T01:CDS 35.0%
!!! CGTTTTTGGGATTTTGTGTT+TGG + Chr4:4879308-4879327 MsG0480018436.01.T01:CDS 35.0%
!!! GGATTTTGATGATGTTGATG+GGG + Chr4:4879370-4879389 MsG0480018436.01.T01:CDS 35.0%
AAAATTTACCTGTTGCGGCT+AGG + Chr4:4879438-4879457 MsG0480018436.01.T01:CDS 40.0%
ACCGTGCAATTCTCTATAAC+TGG + Chr4:4879888-4879907 MsG0480018436.01.T01:CDS 40.0%
GAACGATTATGCTGAAAGCT+TGG + Chr4:4879967-4879986 MsG0480018436.01.T01:CDS 40.0%
GAATCATGATACAGTGGTGT+TGG + Chr4:4879850-4879869 MsG0480018436.01.T01:CDS 40.0%
TTCGTCAACACACAAACACT+CGG - Chr4:4879650-4879669 None:intergenic 40.0%
! ACGATCGTATATGGCGTTTT+TGG + Chr4:4879294-4879313 MsG0480018436.01.T01:CDS 40.0%
! CGATCGTATATGGCGTTTTT+GGG + Chr4:4879295-4879314 MsG0480018436.01.T01:CDS 40.0%
! GTGATTGTTTGGAATGAGAG+CGG - Chr4:4878818-4878837 None:intergenic 40.0%
!! AATGGATTGGTCTGCTTATG+CGG + Chr4:4879173-4879192 MsG0480018436.01.T01:CDS 40.0%
!! AGAGAATTGCACGGTTTTGT+AGG - Chr4:4879883-4879902 None:intergenic 40.0%
!! TGTTGGTTCTTGCAATGGAT+TGG + Chr4:4879160-4879179 MsG0480018436.01.T01:CDS 40.0%
!!! TTTTGATGATGTTGATGGGG+AGG + Chr4:4879373-4879392 MsG0480018436.01.T01:CDS 40.0%
AAAGATTGTTGCGCGGTTGT+TGG + Chr4:4879143-4879162 MsG0480018436.01.T01:CDS 45.0%
CACTTATAAGGTTGTGGCCT+TGG + Chr4:4879349-4879368 MsG0480018436.01.T01:CDS 45.0%
CAGATATTGTCCTTGTGGCA+GGG - Chr4:4879250-4879269 None:intergenic 45.0%
CGACGATAAAGATTGTTGCG+CGG + Chr4:4879136-4879155 MsG0480018436.01.T01:CDS 45.0%
CGGTTCTACTTACGACAATG+AGG + Chr4:4879193-4879212 MsG0480018436.01.T01:CDS 45.0%
TCAGATATTGTCCTTGTGGC+AGG - Chr4:4879251-4879270 None:intergenic 45.0%
!!! GGCTAGGAGGTTGACTTTTT+TGG + Chr4:4879454-4879473 MsG0480018436.01.T01:CDS 45.0%
ACCTTCTCATAACCTGGAGG+AGG - Chr4:4879614-4879633 None:intergenic 50.0%
ATTTACCTGTTGCGGCTAGG+AGG + Chr4:4879441-4879460 MsG0480018436.01.T01:CDS 50.0%
ATTTCGGTGAGAACCTCGTC+CGG - Chr4:4878858-4878877 None:intergenic 50.0%
CAGTTATGTGGCTCCGTTTG+TGG + Chr4:4879222-4879241 MsG0480018436.01.T01:CDS 50.0%
TCCTCCAGGTTATGAGAAGG+TGG + Chr4:4879613-4879632 MsG0480018436.01.T01:CDS 50.0%
TCCTCCTCCAGGTTATGAGA+AGG + Chr4:4879610-4879629 MsG0480018436.01.T01:CDS 50.0%
TGTGCCACCTTCTCATAACC+TGG - Chr4:4879620-4879639 None:intergenic 50.0%
TTGTGGCAGGGTTCCACAAA+CGG - Chr4:4879238-4879257 None:intergenic 50.0%
!! GCGGTTGTTGGTTCTTGCAA+TGG + Chr4:4879155-4879174 MsG0480018436.01.T01:CDS 50.0%
ACACAGTTGCTTCCTCCTCC+AGG + Chr4:4879599-4879618 MsG0480018436.01.T01:CDS 55.0%
GCCACCTTCTCATAACCTGG+AGG - Chr4:4879617-4879636 None:intergenic 55.0%
GTTTGTGGAACCCTGCCACA+AGG + Chr4:4879237-4879256 MsG0480018436.01.T01:CDS 55.0%
TGCTGACGGCGGTGATTGTT+TGG - Chr4:4878829-4878848 None:intergenic 55.0%
TTTCGGTGAGAACCTCGTCC+GGG - Chr4:4878857-4878876 None:intergenic 55.0%
GTCAACCTCCTAGCCGCAAC+AGG - Chr4:4879449-4879468 None:intergenic 60.0%
GGTGAGAACCTCGTCCGGGA+GGG - Chr4:4878853-4878872 None:intergenic 65.0%
TCGTCCGGGAGGGTTGCTGA+CGG - Chr4:4878843-4878862 None:intergenic 65.0%
ACCGCCGTCAGCAACCCTCC+CGG + Chr4:4878836-4878855 MsG0480018436.01.T01:CDS 70.0%
CGGTGAGAACCTCGTCCGGG+AGG - Chr4:4878854-4878873 None:intergenic 70.0%
GTCAGCAACCCTCCCGGACG+AGG + Chr4:4878842-4878861 MsG0480018436.01.T01:CDS 70.0%
TCCGGGAGGGTTGCTGACGG+CGG - Chr4:4878840-4878859 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 4878798 4880003 4878798 ID=MsG0480018436.01;Name=MsG0480018436.01
Chr4 mRNA 4878798 4880003 4878798 ID=MsG0480018436.01.T01;Parent=MsG0480018436.01;Name=MsG0480018436.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|401
Chr4 exon 4878798 4880003 4878798 ID=MsG0480018436.01.T01:exon:1304;Parent=MsG0480018436.01.T01
Chr4 CDS 4878798 4880003 4878798 ID=MsG0480018436.01.T01:cds;Parent=MsG0480018436.01.T01
Gene Sequence

>MsG0480018436.01.T01

ATGAGTTCACGGCGTCTCCGCTCTCATTCCAAACAATCACCGCCGTCAGCAACCCTCCCGGACGAGGTTCTCACCGAAATCCTATACTTGCTTCCAGTCAAATCTCTAATTCAGATGAAATCAGTATGTAAGAAATGGAAAACCCTAATTTCTCATCTTTCATTCATCAAAATTCATCTTAATCATTCATCATCTTCACAAAATCCATACTCTTATCTTTACTATTTCAACATATCTCCACAGATTGGTAAGTACATTTTCATTCCCTTCCCTGTTAATCATTTACTTGAAAACCATAATATCACCATTCCTAAAGATCCTTACTACCGTTTAAAAAACGACGATAAAGATTGTTGCGCGGTTGTTGGTTCTTGCAATGGATTGGTCTGCTTATGCGGTTCTACTTACGACAATGAGGATAAAACAGTTATGTGGCTCCGTTTGTGGAACCCTGCCACAAGGACAATATCTGATAAATTAGGGTTTTTCTATGCTAACGATCGTATATGGCGTTTTTGGGATTTTGTGTTTGGTTATGATAATTCAACTAACACTTATAAGGTTGTGGCCTTGGATTTTGATGATGTTGATGGGGAGGTGAAAGTTTTTAGTTTCGGTGATAATGTTTGGAGAAATATTCAAAATTTACCTGTTGCGGCTAGGAGGTTGACTTTTTTGGATTTAAGAATATATGGTGCCGTACATTTTAGTTCTACTGTCAATTGGGTGACTACCGTTTCGAATGATAATAATGTTTATCAAGTTCTGATTTTTTCGCTTTATTTAGGTACTGAGACATACACACAGTTGCTTCCTCCTCCAGGTTATGAGAAGGTGGCACATGTAATACCGAGTGTTTGTGTGTTGACGAACTCGTTTTGTTTTTATCATGATTATGAGGGGACTGATTTTGTTATATGGAAGATGGAAGAATTTGGAAATGAAAAGTCTTGGAGTCAAATTTTTAAATTTAGCTATCAGAATCTTGGAATGAATTATAAATTTGAACTTGGTGGTTTGTGTTTGAAATTAAAGCCATTACATCTTTCTGAGAATCATGATACAGTGGTGTTGGCAAACATCCTACAAAACCGTGCAATTCTCTATAACTGGACAACTAACAGAGCAAAGAAAACTAGAATTAACAACAACATACGTTGGCACACTATGAACGATTATGCTGAAAGCTTGGTATCAACTTCTTGA
Protein sequence

>MsG0480018436.01.T01

MSSRRLRSHSKQSPPSATLPDEVLTEILYLLPVKSLIQMKSVCKKWKTLISHLSFIKIHLNHSSSSQNPYSYLYYFNISPQIGKYIFIPFPVNHLLENHNITIPKDPYYRLKNDDKDCCAVVGSCNGLVCLCGSTYDNEDKTVMWLRLWNPATRTISDKLGFFYANDRIWRFWDFVFGYDNSTNTYKVVALDFDDVDGEVKVFSFGDNVWRNIQNLPVAARRLTFLDLRIYGAVHFSSTVNWVTTVSNDNNVYQVLIFSLYLGTETYTQLLPPPGYEKVAHVIPSVCVLTNSFCFYHDYEGTDFVIWKMEEFGNEKSWSQIFKFSYQNLGMNYKFELGGLCLKLKPLHLSENHDTVVLANILQNRAILYNWTTNRAKKTRINNNIRWHTMNDYAESLVSTS*