AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037812.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037812.01.T01 MTR_1g071010 54.301 372 118 8 8 334 3 367 3.46e-122 357
MsG0780037812.01.T01 MTR_7g022600 44.089 406 151 9 1 334 1 402 3.20e-101 305
MsG0780037812.01.T01 MTR_7g056797 45.833 384 157 8 1 334 1 383 5.14e-100 301
MsG0780037812.01.T01 MTR_7g056760 45.780 391 149 10 1 334 1 385 4.90e-97 293
MsG0780037812.01.T01 MTR_7g037670 47.632 359 118 9 1 335 1 313 6.95e-96 288
MsG0780037812.01.T01 MTR_4g011660 43.358 399 151 9 8 334 3 398 9.46e-96 291
MsG0780037812.01.T01 MTR_0128s0010 42.746 386 159 9 1 333 1 377 1.79e-90 276
MsG0780037812.01.T01 MTR_0128s0020 43.194 382 153 9 7 333 1 373 2.47e-90 276
MsG0780037812.01.T01 MTR_0128s0070 41.927 384 160 9 5 334 3 377 3.71e-88 271
MsG0780037812.01.T01 MTR_7g062100 41.885 382 163 8 4 334 5 378 1.70e-85 264
MsG0780037812.01.T01 MTR_5g096710 43.432 373 142 10 19 334 19 379 8.29e-85 262
MsG0780037812.01.T01 MTR_7g057270 39.142 373 164 10 22 334 25 394 1.56e-74 236
MsG0780037812.01.T01 MTR_5g069930 41.304 368 157 12 21 338 4 362 4.51e-74 234
MsG0780037812.01.T01 MTR_5g069760 40.556 360 164 9 21 338 4 355 6.98e-73 231
MsG0780037812.01.T01 MTR_7g022670 37.845 399 139 9 1 346 1 343 3.21e-71 226
MsG0780037812.01.T01 MTR_1g088120 38.974 390 164 11 15 338 2 383 2.22e-70 225
MsG0780037812.01.T01 MTR_7g061090 37.594 399 170 12 1 332 1 387 3.70e-69 222
MsG0780037812.01.T01 MTR_7g091640 42.679 321 133 9 20 293 32 348 1.46e-68 219
MsG0780037812.01.T01 MTR_7g056503 38.770 374 174 11 12 334 9 378 1.31e-67 218
MsG0780037812.01.T01 MTR_7g091630 36.788 386 170 11 20 334 29 411 2.32e-66 216
MsG0780037812.01.T01 MTR_7g078040 41.304 322 148 9 50 337 90 404 6.85e-66 214
MsG0780037812.01.T01 MTR_4g013175 41.159 328 149 11 44 338 82 398 5.23e-65 212
MsG0780037812.01.T01 MTR_7g113500 38.506 348 167 11 8 334 41 362 1.08e-64 210
MsG0780037812.01.T01 MTR_7g078840 39.503 362 179 14 10 338 50 404 1.68e-64 211
MsG0780037812.01.T01 MTR_7g060940 37.215 395 163 13 1 333 1 372 9.19e-64 207
MsG0780037812.01.T01 MTR_2g043410 34.406 404 172 10 6 330 4 393 3.49e-63 207
MsG0780037812.01.T01 MTR_7g060960 40.774 336 151 11 21 330 30 343 4.33e-63 205
MsG0780037812.01.T01 MTR_7g061050 38.522 379 153 16 17 332 4 365 5.23e-63 206
MsG0780037812.01.T01 MTR_7g079160 35.539 408 164 13 18 334 3 402 9.24e-63 207
MsG0780037812.01.T01 MTR_7g061060 38.325 394 156 16 17 338 4 382 9.76e-63 205
MsG0780037812.01.T01 MTR_7g055987 39.003 341 141 10 1 296 1 319 1.80e-62 204
MsG0780037812.01.T01 MTR_2g010950 35.101 396 181 12 3 334 2 385 3.72e-62 204
MsG0780037812.01.T01 MTR_7g050520 35.938 384 172 12 6 334 5 369 1.69e-61 202
MsG0780037812.01.T01 MTR_7g056290 34.550 411 173 13 1 330 1 396 2.44e-61 202
MsG0780037812.01.T01 MTR_0242s0060 34.606 393 167 9 21 334 7 388 8.47e-61 201
MsG0780037812.01.T01 MTR_0242s0040 34.606 393 167 9 21 334 7 388 8.47e-61 201
MsG0780037812.01.T01 MTR_1g442850 37.398 369 152 12 25 332 7 357 1.72e-60 199
MsG0780037812.01.T01 MTR_7g050480 35.677 384 173 12 6 334 5 369 3.66e-60 198
MsG0780037812.01.T01 MTR_7g062060 35.219 389 177 12 16 334 2 385 3.89e-60 198
MsG0780037812.01.T01 MTR_7g055930 36.160 401 161 12 22 334 12 405 6.06e-60 199
MsG0780037812.01.T01 MTR_4g013185 35.644 404 166 11 15 334 2 395 6.90e-60 199
MsG0780037812.01.T01 MTR_7g078900 40.000 310 155 10 48 333 88 390 1.84e-59 197
MsG0780037812.01.T01 MTR_8g066440 34.715 386 183 11 10 333 5 383 3.44e-59 196
MsG0780037812.01.T01 MTR_7g055870 35.910 401 162 12 22 334 12 405 4.32e-59 196
MsG0780037812.01.T01 MTR_7g056260 38.438 320 132 9 21 289 12 317 4.84e-59 193
MsG0780037812.01.T01 MTR_4g013180 36.031 383 162 14 18 333 5 371 5.18e-59 197
MsG0780037812.01.T01 MTR_3g437520 34.937 395 168 10 21 335 21 406 1.51e-58 196
MsG0780037812.01.T01 MTR_2g047892 36.911 382 174 13 6 332 5 374 2.39e-58 194
MsG0780037812.01.T01 MTR_4g033495 36.292 383 167 14 16 335 21 389 2.78e-58 195
MsG0780037812.01.T01 MTR_7g077970 34.694 392 176 8 22 337 6 393 7.54e-58 193
MsG0780037812.01.T01 MTR_0649s0020 35.733 375 173 14 19 335 8 372 1.68e-57 191
MsG0780037812.01.T01 MTR_7g056003 35.751 386 161 13 22 333 14 386 2.63e-57 191
MsG0780037812.01.T01 MTR_7g056570 36.729 373 163 13 13 330 9 363 5.88e-57 191
MsG0780037812.01.T01 MTR_7g056717 36.170 376 175 12 8 332 7 368 3.80e-56 187
MsG0780037812.01.T01 MTR_4g129190 35.233 386 176 12 21 342 4 379 4.28e-56 187
MsG0780037812.01.T01 MTR_7g066100 37.267 322 174 10 31 334 62 373 7.86e-56 187
MsG0780037812.01.T01 MTR_7g056390 33.498 406 174 12 7 330 1 392 1.11e-55 187
MsG0780037812.01.T01 MTR_7g056737 35.000 380 180 11 7 333 4 369 1.39e-55 187
MsG0780037812.01.T01 MTR_7g055977 36.119 371 173 11 17 333 1 361 2.45e-55 186
MsG0780037812.01.T01 MTR_3g072470 35.038 391 163 11 19 330 15 393 3.04e-55 186
MsG0780037812.01.T01 MTR_4g034860 37.975 316 152 9 52 335 91 394 4.07e-55 185
MsG0780037812.01.T01 MTR_5g068040 35.401 387 164 13 6 334 3 361 4.89e-55 185
MsG0780037812.01.T01 MTR_6g055210 35.065 385 171 11 23 334 22 400 5.20e-55 186
MsG0780037812.01.T01 MTR_2g043400 34.884 387 162 10 21 330 21 394 1.71e-54 184
MsG0780037812.01.T01 MTR_6g065510 36.723 354 153 14 17 346 17 323 2.56e-54 181
MsG0780037812.01.T01 MTR_7g078860 34.715 386 160 12 23 333 9 377 2.57e-54 183
MsG0780037812.01.T01 MTR_2g010920 33.252 412 187 12 3 334 2 405 3.47e-54 184
MsG0780037812.01.T01 MTR_7g056200 35.714 378 143 13 21 334 21 362 3.54e-54 182
MsG0780037812.01.T01 MTR_2g010900 39.929 283 145 7 52 310 45 326 1.46e-53 181
MsG0780037812.01.T01 MTR_7g066030 35.897 390 184 15 1 332 1 382 2.71e-53 181
MsG0780037812.01.T01 MTR_7g052150 33.083 399 181 12 1 334 1 378 3.29e-53 180
MsG0780037812.01.T01 MTR_4g024890 36.339 366 165 11 23 332 10 363 8.32e-53 179
MsG0780037812.01.T01 MTR_7g066840 35.753 372 172 11 21 337 21 380 9.09e-53 179
MsG0780037812.01.T01 MTR_7g055830 36.648 352 158 10 22 334 12 337 1.38e-52 177
MsG0780037812.01.T01 MTR_7g056710 35.389 373 163 15 19 332 10 363 1.71e-52 178
MsG0780037812.01.T01 MTR_3g080370 37.309 327 152 8 50 334 83 398 2.80e-52 179
MsG0780037812.01.T01 MTR_7g066850 34.509 397 180 15 1 332 1 382 2.91e-52 179
MsG0780037812.01.T01 MTR_0097s0030 33.156 377 193 11 13 343 4 367 5.70e-52 177
MsG0780037812.01.T01 MTR_2g047240 33.156 377 193 11 13 343 4 367 5.70e-52 177
MsG0780037812.01.T01 MTR_5g056020 33.500 400 184 12 11 334 8 401 1.68e-51 178
MsG0780037812.01.T01 MTR_7g066000 35.567 388 187 15 5 335 4 385 2.22e-51 176
MsG0780037812.01.T01 MTR_4g008790 38.019 313 147 9 46 334 126 415 2.50e-51 177
MsG0780037812.01.T01 MTR_0464s0020 32.388 423 177 14 5 335 4 409 3.27e-51 176
MsG0780037812.01.T01 MTR_7g077910 37.963 324 150 14 49 337 5 312 3.69e-51 173
MsG0780037812.01.T01 MTR_6g016285 35.606 396 164 13 14 330 11 394 4.09e-51 176
MsG0780037812.01.T01 MTR_4g030830 33.422 377 172 10 22 332 8 371 8.83e-51 174
MsG0780037812.01.T01 MTR_2g047878 35.311 354 169 13 13 330 11 340 1.22e-50 172
MsG0780037812.01.T01 MTR_2g047200 34.615 390 176 17 1 330 1 371 1.24e-50 174
MsG0780037812.01.T01 MTR_7g445890 36.828 372 173 16 12 335 7 364 1.70e-50 173
MsG0780037812.01.T01 MTR_4g019990 35.638 376 166 13 23 334 6 369 2.08e-50 173
MsG0780037812.01.T01 MTR_7g052670 33.418 395 184 12 21 339 19 410 8.21e-50 172
MsG0780037812.01.T01 MTR_7g061010 35.101 396 166 14 1 334 1 367 8.36e-50 171
MsG0780037812.01.T01 MTR_4g030980 32.212 416 180 11 11 334 3 408 2.51e-49 171
MsG0780037812.01.T01 MTR_2g047895 37.755 294 151 10 60 334 11 291 1.86e-48 166
MsG0780037812.01.T01 MTR_7g077990 33.247 385 171 12 14 334 7 369 2.98e-48 167
MsG0780037812.01.T01 MTR_7g077070 35.882 340 141 11 20 290 13 344 3.31e-48 168
MsG0780037812.01.T01 MTR_3g464500 34.031 382 177 13 6 329 14 378 1.71e-47 166
MsG0780037812.01.T01 MTR_7g009265 35.783 313 172 10 52 339 1 309 3.30e-47 162
MsG0780037812.01.T01 MTR_4g031020 31.175 417 185 12 10 334 2 408 7.89e-47 164
MsG0780037812.01.T01 MTR_7g028660 31.680 363 186 10 18 330 6 356 1.36e-46 162
MsG0780037812.01.T01 MTR_4g030090 33.071 381 184 14 16 332 5 378 2.44e-45 160
MsG0780037812.01.T01 MTR_0707s0020 36.306 314 160 12 46 330 118 420 2.59e-45 160
MsG0780037812.01.T01 MTR_4g129160 37.868 272 145 6 45 300 79 342 3.01e-45 159
MsG0780037812.01.T01 MTR_6g017295 34.835 333 173 9 44 336 3 331 1.04e-44 161
MsG0780037812.01.T01 MTR_5g043160 33.170 407 167 14 20 335 47 439 1.27e-44 159
MsG0780037812.01.T01 MTR_3g013470 34.503 342 185 9 10 338 35 350 1.54e-44 157
MsG0780037812.01.T01 MTR_7g061940 44.670 197 93 4 137 325 79 267 1.97e-44 154
MsG0780037812.01.T01 MTR_5g011350 41.228 228 106 6 50 268 38 246 2.64e-44 153
MsG0780037812.01.T01 MTR_7g070830 31.358 405 202 15 1 334 1 400 3.05e-44 157
MsG0780037812.01.T01 MTR_6g086920 35.843 332 159 15 46 334 130 450 5.38e-44 158
MsG0780037812.01.T01 MTR_7g056023 39.700 267 139 9 15 270 22 277 8.94e-44 152
MsG0780037812.01.T01 MTR_2g006360 34.911 338 155 15 21 333 44 341 2.05e-42 151
MsG0780037812.01.T01 MTR_7g058630 54.054 148 52 5 200 334 16 160 5.85e-42 144
MsG0780037812.01.T01 MTR_7g070880 30.402 398 202 15 6 332 5 398 7.70e-42 151
MsG0780037812.01.T01 MTR_1g029650 32.031 384 184 11 17 334 1 373 1.12e-41 150
MsG0780037812.01.T01 MTR_3g464470 32.527 372 175 12 17 329 1 355 1.42e-41 149
MsG0780037812.01.T01 MTR_2g461450 34.324 370 176 15 7 330 2 350 2.49e-41 148
MsG0780037812.01.T01 MTR_6g088385 32.961 358 149 12 1 330 1 295 4.07e-41 147
MsG0780037812.01.T01 MTR_7g056173 38.767 227 110 5 133 334 25 247 1.74e-40 145
MsG0780037812.01.T01 MTR_7g056170 31.078 399 159 10 21 334 73 440 2.41e-40 147
MsG0780037812.01.T01 MTR_7g035295 32.546 381 158 15 21 335 14 361 3.20e-40 146
MsG0780037812.01.T01 MTR_6g017280 32.199 382 185 16 16 335 2 371 7.84e-40 145
MsG0780037812.01.T01 MTR_5g058620 37.500 248 124 9 111 334 11 251 1.16e-39 142
MsG0780037812.01.T01 MTR_1g058870 37.500 248 124 9 111 334 11 251 1.16e-39 142
MsG0780037812.01.T01 MTR_7g055953 42.466 219 89 9 134 330 89 292 1.67e-39 142
MsG0780037812.01.T01 MTR_4g030760 31.481 378 169 12 13 332 63 408 6.23e-39 143
MsG0780037812.01.T01 MTR_7g445750 34.824 313 149 8 20 278 20 331 1.34e-38 140
MsG0780037812.01.T01 MTR_7g070440 32.861 353 172 13 17 319 1 338 1.39e-38 141
MsG0780037812.01.T01 MTR_6g017305 34.470 264 144 6 100 339 9 267 1.86e-38 139
MsG0780037812.01.T01 MTR_0064s0070 49.057 159 30 2 127 280 1 113 3.00e-38 132
MsG0780037812.01.T01 MTR_4g030790 34.843 287 158 9 20 292 16 287 7.18e-38 138
MsG0780037812.01.T01 MTR_2g437110 31.008 387 171 15 18 335 15 374 1.54e-37 140
MsG0780037812.01.T01 MTR_6g092560 30.570 386 177 16 21 334 10 376 2.32e-36 137
MsG0780037812.01.T01 MTR_8g101940 34.501 371 152 19 23 330 2 344 3.14e-36 135
MsG0780037812.01.T01 MTR_1g112010 34.737 285 143 11 59 332 51 303 3.61e-36 134
MsG0780037812.01.T01 MTR_7g066060 29.426 401 205 12 1 334 1 390 2.69e-35 135
MsG0780037812.01.T01 MTR_7g066010 31.522 368 158 15 23 333 21 351 7.56e-35 131
MsG0780037812.01.T01 MTR_7g078960 38.077 260 132 11 90 329 1 251 7.29e-34 126
MsG0780037812.01.T01 MTR_7g034310 38.785 214 106 6 134 337 16 214 7.54e-34 125
MsG0780037812.01.T01 MTR_5g069950 39.394 198 96 5 100 295 28 203 2.09e-33 123
MsG0780037812.01.T01 MTR_7g050490 38.776 196 69 6 19 174 4 188 1.29e-32 120
MsG0780037812.01.T01 MTR_2g060555 32.917 240 129 7 105 332 46 265 1.47e-32 123
MsG0780037812.01.T01 MTR_4g128320 33.846 260 119 10 92 333 34 258 1.79e-32 122
MsG0780037812.01.T01 MTR_1g015730 29.293 396 177 16 23 346 9 373 3.23e-32 124
MsG0780037812.01.T01 MTR_7g066080 30.123 405 184 15 14 332 5 396 1.69e-31 123
MsG0780037812.01.T01 MTR_7g091610 43.226 155 69 4 195 331 71 224 2.65e-31 119
MsG0780037812.01.T01 MTR_7g056820 31.148 366 175 17 23 330 7 353 6.97e-31 120
MsG0780037812.01.T01 MTR_6g081280 35.217 230 117 6 123 334 6 221 9.72e-31 117
MsG0780037812.01.T01 MTR_4g030110 29.231 390 172 13 15 334 22 377 1.01e-30 120
MsG0780037812.01.T01 MTR_7g089830 43.243 148 51 4 193 322 6 138 2.09e-30 113
MsG0780037812.01.T01 MTR_1g015740 28.994 338 176 10 17 334 3 296 7.12e-30 117
MsG0780037812.01.T01 MTR_7g061100 36.885 244 100 11 17 232 4 221 3.20e-29 115
MsG0780037812.01.T01 MTR_2g010935 36.449 214 91 7 140 334 43 230 5.16e-29 112
MsG0780037812.01.T01 MTR_4g006350 28.990 307 184 11 48 332 559 853 1.08e-28 117
MsG0780037812.01.T01 MTR_7g078940 39.423 208 99 9 50 236 117 318 1.92e-26 108
MsG0780037812.01.T01 MTR_2g027820 31.959 291 134 11 50 334 46 278 2.30e-26 107
MsG0780037812.01.T01 MTR_2g017720 34.361 227 119 8 121 334 71 280 6.52e-25 105
MsG0780037812.01.T01 MTR_7g062070 45.312 128 57 5 225 342 75 199 8.16e-25 100
MsG0780037812.01.T01 MTR_7g062070 46.970 66 35 0 46 111 20 85 4.19e-11 62.0
MsG0780037812.01.T01 MTR_7g066040 38.596 171 84 5 83 232 25 195 1.20e-24 100
MsG0780037812.01.T01 MTR_6g042600 30.362 359 160 14 12 346 25 317 1.81e-24 103
MsG0780037812.01.T01 MTR_7g078880 30.259 347 146 14 19 337 5 283 2.45e-24 102
MsG0780037812.01.T01 MTR_8g030630 35.359 181 87 6 159 330 280 439 3.25e-24 103
MsG0780037812.01.T01 MTR_8g030630 35.032 157 84 3 195 334 85 240 3.25e-20 91.7
MsG0780037812.01.T01 MTR_1g047490 27.900 319 137 10 14 276 12 293 5.23e-24 100
MsG0780037812.01.T01 MTR_0267s0050 31.373 306 172 12 51 330 68 361 5.91e-24 101
MsG0780037812.01.T01 MTR_7g058660 53.763 93 29 2 256 334 103 195 9.37e-24 97.8
MsG0780037812.01.T01 MTR_7g058660 52.381 84 39 1 65 148 1 83 1.01e-19 86.7
MsG0780037812.01.T01 MTR_0064s0060 49.180 122 24 1 7 90 1 122 1.09e-23 95.5
MsG0780037812.01.T01 MTR_7g022580 53.191 94 42 1 51 142 21 114 1.45e-23 95.9
MsG0780037812.01.T01 MTR_2g046920 27.520 367 195 12 23 346 24 362 4.84e-23 99.0
MsG0780037812.01.T01 MTR_7g056793 34.783 207 94 8 131 334 44 212 4.87e-23 96.3
MsG0780037812.01.T01 MTR_4g037465 26.302 384 213 15 3 330 2 371 6.04e-23 99.0
MsG0780037812.01.T01 MTR_4g024870 34.340 265 106 9 24 232 45 297 2.20e-22 97.8
MsG0780037812.01.T01 MTR_4g020000 33.937 221 118 8 132 332 110 322 2.57e-22 96.7
MsG0780037812.01.T01 MTR_6g017270 31.304 230 114 4 16 202 2 230 3.19e-22 96.3
MsG0780037812.01.T01 MTR_6g017270 40.404 99 45 1 246 330 219 317 5.51e-14 72.4
MsG0780037812.01.T01 MTR_3g014570 25.606 371 209 14 16 341 22 370 6.12e-22 95.9
MsG0780037812.01.T01 MTR_3g013950 28.723 376 193 15 17 330 1 363 8.85e-22 95.5
MsG0780037812.01.T01 MTR_5g057710 26.437 348 199 12 22 330 45 374 1.12e-21 95.5
MsG0780037812.01.T01 MTR_3g014540 26.571 350 196 13 19 326 25 355 3.41e-21 94.0
MsG0780037812.01.T01 MTR_2g021150 29.600 250 153 8 83 328 113 343 3.80e-21 93.6
MsG0780037812.01.T01 MTR_7g407070 27.027 333 166 12 18 291 27 341 8.14e-20 90.1
MsG0780037812.01.T01 MTR_7g030040 28.657 335 158 13 15 335 51 318 2.24e-19 88.2
MsG0780037812.01.T01 MTR_3g055000 37.168 113 65 1 222 334 1 107 2.35e-19 83.2
MsG0780037812.01.T01 MTR_1g046600 44.037 109 47 3 48 150 123 223 4.49e-19 86.7
MsG0780037812.01.T01 MTR_6g065980 25.562 356 195 15 13 328 6 331 7.27e-19 87.0
MsG0780037812.01.T01 MTR_5g022420 25.469 373 193 16 19 344 23 357 1.31e-18 86.3
MsG0780037812.01.T01 MTR_3g030310 25.915 355 188 16 22 325 20 350 3.94e-18 85.1
MsG0780037812.01.T01 MTR_1g054725 23.622 381 200 17 13 334 9 357 4.10e-18 84.7
MsG0780037812.01.T01 MTR_2g046900 26.685 356 194 15 23 330 28 364 4.84e-18 84.7
MsG0780037812.01.T01 MTR_3g024040 26.562 320 171 15 29 311 37 329 5.96e-18 84.3
MsG0780037812.01.T01 MTR_3g007330 28.045 353 187 17 19 328 44 372 6.79e-18 84.3
MsG0780037812.01.T01 MTR_7g006360 42.268 97 49 1 245 334 163 259 7.88e-18 83.2
MsG0780037812.01.T01 MTR_7g006360 35.465 172 79 6 10 175 3 148 2.76e-17 81.6
MsG0780037812.01.T01 MTR_7g056723 41.463 123 62 5 59 176 10 127 1.07e-17 80.1
MsG0780037812.01.T01 MTR_3g010390 27.596 337 175 15 5 288 16 336 1.20e-17 83.6
MsG0780037812.01.T01 MTR_1g058190 26.404 356 201 17 13 334 24 352 1.22e-17 83.6
MsG0780037812.01.T01 MTR_3g013740 26.016 369 200 15 20 333 41 391 1.36e-17 83.6
MsG0780037812.01.T01 MTR_7g056727 44.882 127 54 6 50 165 24 145 1.45e-17 81.3
MsG0780037812.01.T01 MTR_2g021190 27.796 313 159 12 22 289 20 310 2.59e-17 82.4
MsG0780037812.01.T01 MTR_2g029990 27.200 250 156 11 83 327 148 376 3.53e-17 82.4
MsG0780037812.01.T01 MTR_3g055070 36.522 115 62 2 222 334 1 106 3.78e-17 78.2
MsG0780037812.01.T01 MTR_3g007410 25.360 347 196 14 26 328 55 382 4.03e-17 82.4
MsG0780037812.01.T01 MTR_3g036290 25.926 351 186 15 18 327 17 334 4.33e-17 81.6
MsG0780037812.01.T01 MTR_7g055850 32.812 192 63 6 22 150 12 200 4.34e-17 80.9
MsG0780037812.01.T01 MTR_3g024130 26.848 257 157 12 83 328 58 294 4.83e-17 81.3
MsG0780037812.01.T01 MTR_3g013770 27.410 332 170 15 1 285 14 321 5.29e-17 81.6
MsG0780037812.01.T01 MTR_3g007360 25.072 347 197 14 26 328 55 382 6.38e-17 81.6
MsG0780037812.01.T01 MTR_1g094210 25.868 317 162 13 10 285 46 330 6.79e-17 81.6
MsG0780037812.01.T01 MTR_1g094210 25.868 317 162 13 10 285 46 330 6.87e-17 81.6
MsG0780037812.01.T01 MTR_3g006670 25.070 359 183 16 19 321 45 373 1.03e-16 81.3
MsG0780037812.01.T01 MTR_3g030320 28.405 257 150 11 80 327 40 271 1.39e-16 79.7
MsG0780037812.01.T01 MTR_3g030350 25.568 352 199 13 19 327 31 362 1.55e-16 80.5
MsG0780037812.01.T01 MTR_3g011100 27.246 334 175 13 3 289 215 527 2.06e-16 80.9
MsG0780037812.01.T01 MTR_0044s0300 24.211 380 211 12 1 327 8 363 2.06e-16 80.1
MsG0780037812.01.T01 MTR_5g011200 22.826 368 214 15 17 335 11 357 3.21e-16 79.3
MsG0780037812.01.T01 MTR_4g061340 26.687 326 154 14 19 289 22 317 5.18e-16 78.6
MsG0780037812.01.T01 MTR_1g054575 25.466 322 176 12 3 282 27 326 6.22e-16 79.3
MsG0780037812.01.T01 MTR_5g046280 29.317 249 143 12 86 326 3 226 6.32e-16 77.0
MsG0780037812.01.T01 MTR_6g027910 26.804 388 188 20 17 335 1 361 6.69e-16 78.6
MsG0780037812.01.T01 MTR_3g009240 27.763 371 190 18 18 348 30 362 6.69e-16 78.6
MsG0780037812.01.T01 MTR_6g053240 25.000 352 194 15 18 319 23 354 7.81e-16 78.6
MsG0780037812.01.T01 MTR_7g070937 39.316 117 56 3 133 235 10 125 7.84e-16 74.7
MsG0780037812.01.T01 MTR_7g070900 32.203 177 76 4 130 293 232 377 8.85e-16 78.6
MsG0780037812.01.T01 MTR_4g013190 46.429 84 40 2 46 125 38 120 1.16e-15 72.8
MsG0780037812.01.T01 MTR_3g009300 27.899 276 165 11 26 289 37 290 1.32e-15 77.4
MsG0780037812.01.T01 MTR_7g021580 30.328 244 90 10 7 205 9 217 1.43e-15 76.6
MsG0780037812.01.T01 MTR_1g097330 25.982 331 171 14 10 292 3 307 2.75e-15 77.0
MsG0780037812.01.T01 MTR_2g055970 23.433 367 203 16 8 328 201 535 3.02e-15 77.0
MsG0780037812.01.T01 MTR_1g097560 24.859 354 191 16 19 330 32 352 3.35e-15 76.3
MsG0780037812.01.T01 MTR_5g057690 26.062 353 183 16 22 330 45 363 5.57e-15 75.9
MsG0780037812.01.T01 MTR_4g055060 26.549 339 156 16 18 293 17 325 8.35e-15 75.1
MsG0780037812.01.T01 MTR_2g046830 27.007 274 162 12 68 330 107 353 1.26e-14 74.7
MsG0780037812.01.T01 MTR_4g024910 41.525 118 60 4 36 151 31 141 1.29e-14 74.3
MsG0780037812.01.T01 MTR_3g007300 26.027 365 192 17 4 334 30 350 1.40e-14 74.3
MsG0780037812.01.T01 MTR_2g078870 22.569 288 182 12 74 344 39 302 1.41e-14 73.9
MsG0780037812.01.T01 MTR_0760s0010 29.808 208 116 9 108 313 165 344 2.34e-14 73.9
MsG0780037812.01.T01 MTR_4g108820 28.720 289 164 13 16 292 35 293 2.36e-14 73.2
MsG0780037812.01.T01 MTR_4g107820 24.194 310 176 10 14 285 27 315 2.37e-14 73.9
MsG0780037812.01.T01 MTR_4g107780 24.194 310 176 10 14 285 27 315 2.37e-14 73.9
MsG0780037812.01.T01 MTR_4g107780 24.194 310 176 10 14 285 27 315 2.48e-14 73.9
MsG0780037812.01.T01 MTR_4g107820 24.194 310 176 10 14 285 27 315 2.75e-14 73.9
MsG0780037812.01.T01 MTR_3g024110 25.140 358 188 17 19 328 97 422 3.00e-14 73.9
MsG0780037812.01.T01 MTR_6g007135 24.054 370 207 14 23 337 26 376 3.33e-14 73.6
MsG0780037812.01.T01 MTR_7g066830 42.105 95 45 3 83 177 95 179 3.73e-14 70.5
MsG0780037812.01.T01 MTR_5g057020 25.078 319 165 11 22 297 45 332 4.31e-14 72.8
MsG0780037812.01.T01 MTR_1g055375 26.882 279 164 15 72 334 93 347 5.23e-14 72.8
MsG0780037812.01.T01 MTR_6g048120 26.480 321 174 13 14 289 29 332 5.42e-14 72.8
MsG0780037812.01.T01 MTR_3g436150 29.911 224 124 12 82 291 131 335 6.73e-14 72.4
MsG0780037812.01.T01 MTR_3g009310 27.244 312 165 12 18 288 37 327 1.17e-13 71.6
MsG0780037812.01.T01 MTR_4g031770 24.646 353 181 16 23 317 4 329 1.70e-13 71.2
MsG0780037812.01.T01 MTR_7g078050 35.036 137 51 3 21 122 4 137 2.10e-13 69.7
MsG0780037812.01.T01 MTR_3g006530 27.888 251 151 11 84 328 145 371 3.03e-13 70.5
MsG0780037812.01.T01 MTR_5g057040 27.230 213 112 6 22 200 45 248 6.48e-13 70.5
MsG0780037812.01.T01 MTR_1g068860 20.728 357 224 11 21 335 2 341 6.82e-13 69.3
MsG0780037812.01.T01 MTR_3g036335 24.167 360 195 15 19 327 37 369 7.74e-13 69.3
MsG0780037812.01.T01 MTR_5g057643 31.053 190 93 9 22 176 45 231 9.01e-13 68.2
MsG0780037812.01.T01 MTR_0128s0110 27.895 190 108 6 160 330 2 181 1.01e-12 67.0
MsG0780037812.01.T01 MTR_3g011060 25.769 260 160 11 81 328 128 366 1.12e-12 68.9
MsG0780037812.01.T01 MTR_1g055065 23.358 274 168 13 84 335 19 272 1.90e-12 67.4
MsG0780037812.01.T01 MTR_4g006840 32.800 250 92 13 26 231 2 219 2.21e-12 66.2
MsG0780037812.01.T01 MTR_1g056710 23.280 378 217 14 14 341 25 379 2.58e-12 67.8
MsG0780037812.01.T01 MTR_6g004660 27.481 262 150 14 83 328 117 354 2.97e-12 67.4
MsG0780037812.01.T01 MTR_5g070380 39.080 87 48 2 38 119 64 150 3.32e-12 64.7
MsG0780037812.01.T01 MTR_1g115185 28.755 233 134 12 108 330 161 371 4.24e-12 67.0
MsG0780037812.01.T01 MTR_3g036430 26.154 325 192 16 22 326 19 315 4.79e-12 66.6
MsG0780037812.01.T01 MTR_3g011020 24.798 371 184 16 19 333 24 355 1.27e-11 65.5
MsG0780037812.01.T01 MTR_7g445580 36.842 95 53 2 241 330 51 143 2.21e-11 61.6
MsG0780037812.01.T01 MTR_8g062660 29.204 226 109 10 79 281 112 309 2.22e-11 65.5
MsG0780037812.01.T01 MTR_3g006640 22.101 276 161 12 82 328 17 267 2.44e-11 64.3
MsG0780037812.01.T01 MTR_3g096270 27.907 215 122 7 22 233 44 228 2.57e-11 63.9
MsG0780037812.01.T01 MTR_5g007610 23.698 384 217 18 12 342 34 394 2.62e-11 64.7
MsG0780037812.01.T01 MTR_5g009060 26.641 259 151 12 84 327 143 377 2.68e-11 64.7
MsG0780037812.01.T01 MTR_6g014720 26.592 267 162 14 84 340 115 357 4.27e-11 63.9
MsG0780037812.01.T01 MTR_1g114650 28.649 185 106 7 139 323 24 182 5.39e-11 62.4
MsG0780037812.01.T01 MTR_6g027890 29.798 198 105 10 108 284 73 257 5.55e-11 63.2
MsG0780037812.01.T01 MTR_3g007430 25.145 346 190 14 26 329 46 364 7.68e-11 63.2
MsG0780037812.01.T01 MTR_3g024150 28.384 229 129 12 108 326 155 358 9.37e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 82 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGACGTGGCTTCGTTTA+TGG 0.141309 7:+33598331 MsG0780037812.01.T01:CDS
ACCAGGTGTTTGTGCTTTAA+TGG 0.153231 7:+33598764 MsG0780037812.01.T01:CDS
GATTGTGATAGCTAAATTTA+AGG 0.190788 7:-33598878 None:intergenic
TTAGTTTCGGGAATAATATT+TGG 0.248635 7:+33598517 MsG0780037812.01.T01:CDS
AGGTCCAAGTTCTTAGTTTC+GGG 0.269898 7:+33598505 MsG0780037812.01.T01:CDS
ATATGGAAGATGACAAAATT+TGG 0.276695 7:+33598831 MsG0780037812.01.T01:CDS
AGTAAACAGCTAACAGAAAA+AGG 0.288367 7:-33598183 None:intergenic
AATTTGGAGATGAAAATTCT+TGG 0.320672 7:+33598847 MsG0780037812.01.T01:CDS
ATATGAATGGATTGAAATAT+TGG 0.332821 7:+33598403 MsG0780037812.01.T01:CDS
TCAGATATTGTTCTGGTGGC+GGG 0.364272 7:-33598357 None:intergenic
AAATATTGGAAGTTTGAGTT+TGG 0.371784 7:+33598417 MsG0780037812.01.T01:CDS
CAAGCAGACCAATGCATTGC+AGG 0.374491 7:-33598283 None:intergenic
ATTTCACCGTTGAGATCATC+AGG 0.391698 7:-33597986 None:intergenic
TTAATTGGTTGGCCATTGTT+TGG 0.399755 7:+33598631 MsG0780037812.01.T01:CDS
ATCTTCATCAATGGTTTCAC+TGG 0.401939 7:-33598022 None:intergenic
GAGGTCCAAGTTCTTAGTTT+CGG 0.408025 7:+33598504 MsG0780037812.01.T01:CDS
TCTTACTATCTCGGCGATAC+TGG 0.412406 7:+33599845 MsG0780037812.01.T01:CDS
AGAACAATATCTGATAAGTT+CGG 0.414168 7:+33598366 MsG0780037812.01.T01:CDS
GAACTTATCAGATATTGTTC+TGG 0.420898 7:-33598364 None:intergenic
GTTTCACTGGAAGCCATGAT+AGG 0.422616 7:-33598009 None:intergenic
AGAGAATTGCTCGGTCTTGT+TGG 0.438209 7:-33598971 None:intergenic
ACACACTTCATCTTCATCAA+TGG 0.438487 7:-33598031 None:intergenic
ATCAGATATTGTTCTGGTGG+CGG 0.440405 7:-33598358 None:intergenic
ATAATAGAGTAGTGAAAACT+AGG 0.444555 7:+33599006 MsG0780037812.01.T01:CDS
ACCTTCACAGAATCCATTAT+AGG 0.450055 7:-33598729 None:intergenic
AAAGTTGTTGCGTTAAATAG+AGG 0.455262 7:+33598465 MsG0780037812.01.T01:CDS
TATTTACATGATGATATGAA+TGG 0.456029 7:+33598390 MsG0780037812.01.T01:CDS
TATTCCCGAAACTAAGAACT+TGG 0.456540 7:-33598509 None:intergenic
AAGGACTGTCGTAGAGTTGT+TGG 0.469787 7:+33598258 MsG0780037812.01.T01:CDS
GAACAATATCTGATAAGTTC+GGG 0.478058 7:+33598367 MsG0780037812.01.T01:CDS
ATGCATTGGTCTGCTTGCTC+AGG 0.478499 7:+33598289 MsG0780037812.01.T01:CDS
AATCGATAGTAAGGATCCTT+AGG 0.479371 7:-33598228 None:intergenic
ATGCCGCGTCATCGGTGGTT+GGG 0.479884 7:-33597924 None:intergenic
TTGTGGATCAATCGATAGTA+AGG 0.490942 7:-33598237 None:intergenic
CGGTGACGATGCCGCGTCAT+CGG 0.494273 7:-33597932 None:intergenic
TGTTGGTTCCTGCAATGCAT+TGG 0.500031 7:+33598275 MsG0780037812.01.T01:CDS
AAGGCGGCATGTTGGATTGA+CGG 0.519146 7:-33597952 None:intergenic
TTATCATGAGTTTGAGGGAA+CGG 0.521357 7:+33598800 MsG0780037812.01.T01:CDS
GTCATTCCATCTTACTATCT+CGG 0.536988 7:+33599836 MsG0780037812.01.T01:CDS
CCGCTCGGTCACCCTTCCTA+AGG 0.541517 7:+33598212 MsG0780037812.01.T01:CDS
ACCGAGCAATTCTCTATGAT+CGG 0.543050 7:+33598979 MsG0780037812.01.T01:CDS
GATGCCGCGTCATCGGTGGT+TGG 0.543618 7:-33597925 None:intergenic
ATATGGTTTCAAGGGGTGTA+CGG 0.544477 7:+33599814 MsG0780037812.01.T01:intron
TCAACGGTGAAATCCTATCA+TGG 0.545544 7:+33597996 MsG0780037812.01.T01:CDS
TATTTCACTTGACCTAGGTA+CGG 0.546340 7:+33598683 MsG0780037812.01.T01:CDS
GCTATTATTTCACTTGACCT+AGG 0.549876 7:+33598678 MsG0780037812.01.T01:CDS
GATAGTAAGGATCCTTAGGA+AGG 0.551198 7:-33598224 None:intergenic
CAGATATTGTTCTGGTGGCG+GGG 0.555396 7:-33598356 None:intergenic
AAGATTATTATTCCAAACAA+TGG 0.556698 7:-33598643 None:intergenic
TCCTATAATGGATTCTGTGA+AGG 0.565312 7:+33598728 MsG0780037812.01.T01:CDS
CATACTGTTATGATCATACC+AGG 0.565351 7:+33598577 MsG0780037812.01.T01:CDS
TAATAGAGTAGTGAAAACTA+GGG 0.568472 7:+33599007 MsG0780037812.01.T01:CDS
CTTATCAGATATTGTTCTGG+TGG 0.570276 7:-33598361 None:intergenic
ACCGTTGAGATCATCAGGGA+GGG 0.573849 7:-33597981 None:intergenic
TCCATTAAAGCACAAACACC+TGG 0.574667 7:-33598765 None:intergenic
TGACGATGCCGCGTCATCGG+TGG 0.577573 7:-33597929 None:intergenic
GGTTACAGAAGGCGGCATGT+TGG 0.577995 7:-33597960 None:intergenic
CAACTCTACGACAGTCCTTG+TGG 0.581717 7:-33598254 None:intergenic
TTATGAGAATGATGATACAA+TGG 0.587550 7:+33598935 MsG0780037812.01.T01:CDS
ACAGTATGATTGTAGAAGCA+TGG 0.596052 7:-33598562 None:intergenic
TTCACAGAATCCATTATAGG+AGG 0.613227 7:-33598726 None:intergenic
TCCGATCATAGAGAATTGCT+CGG 0.622552 7:-33598980 None:intergenic
ATGTACACCAGCATACATCC+TGG 0.622669 7:-33598595 None:intergenic
GTGTGTGTGTCTCCGTACCT+AGG 0.625850 7:-33598695 None:intergenic
GATCATACCAGGATGTATGC+TGG 0.630886 7:+33598588 MsG0780037812.01.T01:CDS
CACCGTTGAGATCATCAGGG+AGG 0.633331 7:-33597982 None:intergenic
GTACCCAACCACCGATGACG+CGG 0.637035 7:+33597921 MsG0780037812.01.T01:CDS
CTGTTTACTAGATAACCGCT+CGG 0.637816 7:+33598197 MsG0780037812.01.T01:CDS
GTATCGCCGAGATAGTAAGA+TGG 0.640086 7:-33599842 None:intergenic
ATAGTAAGGATCCTTAGGAA+GGG 0.649226 7:-33598223 None:intergenic
TCAGGGAGGGTTACAGAAGG+CGG 0.653916 7:-33597968 None:intergenic
TAGAGGTAGTAATGTGACAA+CGG 0.657754 7:+33598482 MsG0780037812.01.T01:CDS
CTTCAAATGAACTTTCAATG+TGG 0.665698 7:+33598900 MsG0780037812.01.T01:CDS
ATGATTGTAGAAGCATGGCA+AGG 0.666077 7:-33598557 None:intergenic
TCATCAGGGAGGGTTACAGA+AGG 0.668598 7:-33597971 None:intergenic
ACCCTCCCTGATGATCTCAA+CGG 0.686721 7:+33597980 MsG0780037812.01.T01:CDS
CCTTAGGAAGGGTGACCGAG+CGG 0.700228 7:-33598212 None:intergenic
TTTCACCGTTGAGATCATCA+GGG 0.706159 7:-33597985 None:intergenic
ACGATCAACGTAAAGAGACG+TGG 0.720656 7:+33598319 MsG0780037812.01.T01:CDS
AAGGTGTCAAGTGTACTACC+AGG 0.723648 7:+33598747 MsG0780037812.01.T01:CDS
TTACTATCGATTGATCCACA+AGG 0.726781 7:+33598239 MsG0780037812.01.T01:CDS
AGGTAGTAATGTGACAACGG+AGG 0.755304 7:+33598485 MsG0780037812.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCTTTTTATTTTCACAA+TGG + Chr7:33599169-33599188 MsG0780037812.01.T01:intron 15.0%
!! AAACTCATGATAAAAACAAA+GGG - Chr7:33598793-33598812 None:intergenic 20.0%
!! AAGATTATTATTCCAAACAA+TGG - Chr7:33598646-33598665 None:intergenic 20.0%
!! CAAGTTGTTTAAATCAATTA+TGG - Chr7:33599666-33599685 None:intergenic 20.0%
!! TATTTACATGATGATATGAA+TGG + Chr7:33598390-33598409 MsG0780037812.01.T01:CDS 20.0%
!! TTTGAGTCTGAAAATAATAT+TGG + Chr7:33599589-33599608 MsG0780037812.01.T01:intron 20.0%
!!! ATATGAATGGATTGAAATAT+TGG + Chr7:33598403-33598422 MsG0780037812.01.T01:CDS 20.0%
!!! ATATTATTTTCAGACTCAAA+TGG - Chr7:33599589-33599608 None:intergenic 20.0%
!!! CATAATTGATTTAAACAACT+TGG + Chr7:33599664-33599683 MsG0780037812.01.T01:intron 20.0%
! AAAATTTCTCCTTTCATCAA+CGG - Chr7:33599751-33599770 None:intergenic 25.0%
! AATTTGGAGATGAAAATTCT+TGG + Chr7:33598847-33598866 MsG0780037812.01.T01:CDS 25.0%
! AGAACAATATCTGATAAGTT+CGG + Chr7:33598366-33598385 MsG0780037812.01.T01:CDS 25.0%
! ATAATAGAGTAGTGAAAACT+AGG + Chr7:33599006-33599025 MsG0780037812.01.T01:CDS 25.0%
! ATATGGAAGATGACAAAATT+TGG + Chr7:33598831-33598850 MsG0780037812.01.T01:CDS 25.0%
! ATCTGTTTATATGGTTTCAA+GGG + Chr7:33599806-33599825 MsG0780037812.01.T01:intron 25.0%
! CAAACTCATGATAAAAACAA+AGG - Chr7:33598794-33598813 None:intergenic 25.0%
! GATTGTGATAGCTAAATTTA+AGG - Chr7:33598881-33598900 None:intergenic 25.0%
! TAATAGAGTAGTGAAAACTA+GGG + Chr7:33599007-33599026 MsG0780037812.01.T01:CDS 25.0%
! TTAGTTTCGGGAATAATATT+TGG + Chr7:33598517-33598536 MsG0780037812.01.T01:CDS 25.0%
! TTATGAGAATGATGATACAA+TGG + Chr7:33598935-33598954 MsG0780037812.01.T01:CDS 25.0%
! TTTCTTGAATGATACTAGAT+AGG - Chr7:33598133-33598152 None:intergenic 25.0%
!! AAATATTGGAAGTTTGAGTT+TGG + Chr7:33598417-33598436 MsG0780037812.01.T01:CDS 25.0%
!! AATTTTGCCATCTGTTTATA+TGG + Chr7:33599797-33599816 MsG0780037812.01.T01:intron 25.0%
!! ATTTGAACTGCACTTTTAAT+TGG + Chr7:33598616-33598635 MsG0780037812.01.T01:CDS 25.0%
!! TACTGGTTAAATAAGTTTCA+CGG + Chr7:33599719-33599738 MsG0780037812.01.T01:intron 25.0%
!!! CGATGCATTTTAACAAAATT+AGG - Chr7:33598084-33598103 None:intergenic 25.0%
!!! TGTTTTTATCATGAGTTTGA+GGG + Chr7:33598795-33598814 MsG0780037812.01.T01:CDS 25.0%
!!! TTGTTTTTATCATGAGTTTG+AGG + Chr7:33598794-33598813 MsG0780037812.01.T01:CDS 25.0%
AAAGTTGTTGCGTTAAATAG+AGG + Chr7:33598465-33598484 MsG0780037812.01.T01:CDS 30.0%
AGTAAACAGCTAACAGAAAA+AGG - Chr7:33598186-33598205 None:intergenic 30.0%
AGTTACATTCTCATCAGTTA+TGG + Chr7:33599384-33599403 MsG0780037812.01.T01:intron 30.0%
ATCATTCAAGAAATCCATAC+AGG + Chr7:33598140-33598159 MsG0780037812.01.T01:intron 30.0%
ATTCGAAAAGGATTCTTGTT+AGG - Chr7:33599280-33599299 None:intergenic 30.0%
CATCTGTTTATATGGTTTCA+AGG + Chr7:33599805-33599824 MsG0780037812.01.T01:intron 30.0%
CTTCAAATGAACTTTCAATG+TGG + Chr7:33598900-33598919 MsG0780037812.01.T01:CDS 30.0%
CTTGAAACCATATAAACAGA+TGG - Chr7:33599807-33599826 None:intergenic 30.0%
GAACAATATCTGATAAGTTC+GGG + Chr7:33598367-33598386 MsG0780037812.01.T01:CDS 30.0%
GAACTTATCAGATATTGTTC+TGG - Chr7:33598367-33598386 None:intergenic 30.0%
GTAGTATGAAAGAGGTTTAT+TGG + Chr7:33599361-33599380 MsG0780037812.01.T01:intron 30.0%
TCTGTTTATATGGTTTCAAG+GGG + Chr7:33599807-33599826 MsG0780037812.01.T01:intron 30.0%
TGTGGATCTATAATTCGAAA+AGG - Chr7:33599292-33599311 None:intergenic 30.0%
TTAACTCACTCATAAAGAGT+TGG - Chr7:33599550-33599569 None:intergenic 30.0%
TTAAGATGGTAGTATGAAAG+AGG + Chr7:33599353-33599372 MsG0780037812.01.T01:intron 30.0%
! AGGAGAAATTTTACTAAGCT+TGG + Chr7:33599759-33599778 MsG0780037812.01.T01:intron 30.0%
! AGTGAATGCCTAATTTTCAA+AGG - Chr7:33599206-33599225 None:intergenic 30.0%
! TAGCTTCACCTTTGAAAATT+AGG + Chr7:33599195-33599214 MsG0780037812.01.T01:intron 30.0%
!! GATTTAAACAACTTGGTGTA+CGG + Chr7:33599671-33599690 MsG0780037812.01.T01:intron 30.0%
AAGATGAAGTGTGTAAGTCA+TGG + Chr7:33598040-33598059 MsG0780037812.01.T01:intron 35.0%
AATCGATAGTAAGGATCCTT+AGG - Chr7:33598231-33598250 None:intergenic 35.0%
ACACACTTCATCTTCATCAA+TGG - Chr7:33598034-33598053 None:intergenic 35.0%
ACAGTATGATTGTAGAAGCA+TGG - Chr7:33598565-33598584 None:intergenic 35.0%
ACCTTCACAGAATCCATTAT+AGG - Chr7:33598732-33598751 None:intergenic 35.0%
ATAGTAAGGATCCTTAGGAA+GGG - Chr7:33598226-33598245 None:intergenic 35.0%
ATCTTCATCAATGGTTTCAC+TGG - Chr7:33598025-33598044 None:intergenic 35.0%
CATACTGTTATGATCATACC+AGG + Chr7:33598577-33598596 MsG0780037812.01.T01:CDS 35.0%
CTTATCAGATATTGTTCTGG+TGG - Chr7:33598364-33598383 None:intergenic 35.0%
GCTATTATTTCACTTGACCT+AGG + Chr7:33598678-33598697 MsG0780037812.01.T01:CDS 35.0%
GTAGTTAGTGCATGTTAAGA+TGG + Chr7:33599339-33599358 MsG0780037812.01.T01:intron 35.0%
GTCATTCCATCTTACTATCT+CGG + Chr7:33599693-33599712 MsG0780037812.01.T01:intron 35.0%
GTCATTCCATCTTACTATCT+TGG + Chr7:33599693-33599712 MsG0780037812.01.T01:intron 35.0%
TAGAACTCCTGTTCTCATAA+AGG + Chr7:33599511-33599530 MsG0780037812.01.T01:intron 35.0%
TAGAGGTAGTAATGTGACAA+CGG + Chr7:33598482-33598501 MsG0780037812.01.T01:CDS 35.0%
TATTCCCGAAACTAAGAACT+TGG - Chr7:33598512-33598531 None:intergenic 35.0%
TATTTCACTTGACCTAGGTA+CGG + Chr7:33598683-33598702 MsG0780037812.01.T01:CDS 35.0%
TCATTTGCCTTTATGAGAAC+AGG - Chr7:33599521-33599540 None:intergenic 35.0%
TTATCATGAGTTTGAGGGAA+CGG + Chr7:33598800-33598819 MsG0780037812.01.T01:CDS 35.0%
TTCAAGAAATCCATACAGGA+TGG + Chr7:33598144-33598163 MsG0780037812.01.T01:intron 35.0%
TTCACAGAATCCATTATAGG+AGG - Chr7:33598729-33598748 None:intergenic 35.0%
TTGTGGATCAATCGATAGTA+AGG - Chr7:33598240-33598259 None:intergenic 35.0%
! ACAATTTTCGCCTCCTATAA+TGG + Chr7:33598716-33598735 MsG0780037812.01.T01:CDS 35.0%
! GGGTTAGCAAAAAGATATGT+TGG + Chr7:33599027-33599046 MsG0780037812.01.T01:intron 35.0%
! TGAGTTAAGTACACTTTTGC+AGG + Chr7:33599562-33599581 MsG0780037812.01.T01:intron 35.0%
! TTAATTGGTTGGCCATTGTT+TGG + Chr7:33598631-33598650 MsG0780037812.01.T01:CDS 35.0%
! TTACTATCGATTGATCCACA+AGG + Chr7:33598239-33598258 MsG0780037812.01.T01:CDS 35.0%
! TTTGCTTGAAGTTGACTTTG+TGG - Chr7:33599310-33599329 None:intergenic 35.0%
!! AGGGAACGGATTTTGTTATA+TGG + Chr7:33598814-33598833 MsG0780037812.01.T01:CDS 35.0%
!! GAACTGCACTTTTAATTGGT+TGG + Chr7:33598620-33598639 MsG0780037812.01.T01:CDS 35.0%
!! TCCTATAATGGATTCTGTGA+AGG + Chr7:33598728-33598747 MsG0780037812.01.T01:CDS 35.0%
ACCAGGTGTTTGTGCTTTAA+TGG + Chr7:33598764-33598783 MsG0780037812.01.T01:CDS 40.0%
ACCGAGCAATTCTCTATGAT+CGG + Chr7:33598979-33598998 MsG0780037812.01.T01:CDS 40.0%
AGGTCCAAGTTCTTAGTTTC+GGG + Chr7:33598505-33598524 MsG0780037812.01.T01:CDS 40.0%
ATCAGATATTGTTCTGGTGG+CGG - Chr7:33598361-33598380 None:intergenic 40.0%
ATTTCACCGTTGAGATCATC+AGG - Chr7:33597989-33598008 None:intergenic 40.0%
CTGTTTACTAGATAACCGCT+CGG + Chr7:33598197-33598216 MsG0780037812.01.T01:CDS 40.0%
GAGGTCCAAGTTCTTAGTTT+CGG + Chr7:33598504-33598523 MsG0780037812.01.T01:CDS 40.0%
GATAGTAAGGATCCTTAGGA+AGG - Chr7:33598227-33598246 None:intergenic 40.0%
GTATCGCCAAGATAGTAAGA+TGG - Chr7:33599702-33599721 None:intergenic 40.0%
TCAACGGTGAAATCCTATCA+TGG + Chr7:33597996-33598015 MsG0780037812.01.T01:CDS 40.0%
TCCATTAAAGCACAAACACC+TGG - Chr7:33598768-33598787 None:intergenic 40.0%
TCCGATCATAGAGAATTGCT+CGG - Chr7:33598983-33599002 None:intergenic 40.0%
TCTTACTATCTTGGCGATAC+TGG + Chr7:33599702-33599721 MsG0780037812.01.T01:intron 40.0%
TTTCACCGTTGAGATCATCA+GGG - Chr7:33597988-33598007 None:intergenic 40.0%
! ATATGGTTTCAAGGGGTGTA+CGG + Chr7:33599814-33599833 MsG0780037812.01.T01:intron 40.0%
! ATGATTGTAGAAGCATGGCA+AGG - Chr7:33598560-33598579 None:intergenic 40.0%
AAGAGACGTGGCTTCGTTTA+TGG + Chr7:33598331-33598350 MsG0780037812.01.T01:CDS 45.0%
AAGGACTGTCGTAGAGTTGT+TGG + Chr7:33598258-33598277 MsG0780037812.01.T01:CDS 45.0%
ACGATCAACGTAAAGAGACG+TGG + Chr7:33598319-33598338 MsG0780037812.01.T01:CDS 45.0%
ACTGCAATCACCATCCTGTA+TGG - Chr7:33598157-33598176 None:intergenic 45.0%
AGGTAGTAATGTGACAACGG+AGG + Chr7:33598485-33598504 MsG0780037812.01.T01:CDS 45.0%
ATGTACACCAGCATACATCC+TGG - Chr7:33598598-33598617 None:intergenic 45.0%
GATCATACCAGGATGTATGC+TGG + Chr7:33598588-33598607 MsG0780037812.01.T01:CDS 45.0%
GTATCGCCGAGATAGTAAGA+TGG - Chr7:33599845-33599864 None:intergenic 45.0%
GTTTCACTGGAAGCCATGAT+AGG - Chr7:33598012-33598031 None:intergenic 45.0%
TCAGATATTGTTCTGGTGGC+GGG - Chr7:33598360-33598379 None:intergenic 45.0%
TCTTACTATCTCGGCGATAC+TGG + Chr7:33599845-33599864 MsG0780037812.01.T01:CDS 45.0%
! AAGGTGTCAAGTGTACTACC+AGG + Chr7:33598747-33598766 MsG0780037812.01.T01:CDS 45.0%
! AGAGAATTGCTCGGTCTTGT+TGG - Chr7:33598974-33598993 None:intergenic 45.0%
! CGGTGTTTACCGTTGATGAA+AGG + Chr7:33599739-33599758 MsG0780037812.01.T01:intron 45.0%
!! TGTTGGTTCCTGCAATGCAT+TGG + Chr7:33598275-33598294 MsG0780037812.01.T01:CDS 45.0%
AAGGCGGCATGTTGGATTGA+CGG - Chr7:33597955-33597974 None:intergenic 50.0%
ACCCTCCCTGATGATCTCAA+CGG + Chr7:33597980-33597999 MsG0780037812.01.T01:CDS 50.0%
ACCGTTGAGATCATCAGGGA+GGG - Chr7:33597984-33598003 None:intergenic 50.0%
CAACTCTACGACAGTCCTTG+TGG - Chr7:33598257-33598276 None:intergenic 50.0%
CAAGCAGACCAATGCATTGC+AGG - Chr7:33598286-33598305 None:intergenic 50.0%
TCATCAGGGAGGGTTACAGA+AGG - Chr7:33597974-33597993 None:intergenic 50.0%
! ATGCATTGGTCTGCTTGCTC+AGG + Chr7:33598289-33598308 MsG0780037812.01.T01:CDS 50.0%
! CAGATATTGTTCTGGTGGCG+GGG - Chr7:33598359-33598378 None:intergenic 50.0%
CACCGTTGAGATCATCAGGG+AGG - Chr7:33597985-33598004 None:intergenic 55.0%
GGTTACAGAAGGCGGCATGT+TGG - Chr7:33597963-33597982 None:intergenic 55.0%
GTGTGTGTGTCTCCGTACCT+AGG - Chr7:33598698-33598717 None:intergenic 55.0%
TCAGGGAGGGTTACAGAAGG+CGG - Chr7:33597971-33597990 None:intergenic 55.0%
ATGCCGCGTCATCGGTGGTT+GGG - Chr7:33597927-33597946 None:intergenic 60.0%
CCTTAGGAAGGGTGACCGAG+CGG - Chr7:33598215-33598234 None:intergenic 60.0%
GTACCCAACCACCGATGACG+CGG + Chr7:33597921-33597940 MsG0780037812.01.T01:CDS 60.0%
CCGCTCGGTCACCCTTCCTA+AGG + Chr7:33598212-33598231 MsG0780037812.01.T01:CDS 65.0%
CGGTGACGATGCCGCGTCAT+CGG - Chr7:33597935-33597954 None:intergenic 65.0%
GATGCCGCGTCATCGGTGGT+TGG - Chr7:33597928-33597947 None:intergenic 65.0%
TGACGATGCCGCGTCATCGG+TGG - Chr7:33597932-33597951 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 33597917 33599871 33597917 ID=MsG0780037812.01;Name=MsG0780037812.01
Chr7 mRNA 33597917 33599871 33597917 ID=MsG0780037812.01.T01;Parent=MsG0780037812.01;Name=MsG0780037812.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.66|1|1|3|0|348
Chr7 exon 33597917 33598051 33597917 ID=MsG0780037812.01.T01:exon:812;Parent=MsG0780037812.01.T01
Chr7 exon 33598162 33599028 33598162 ID=MsG0780037812.01.T01:exon:811;Parent=MsG0780037812.01.T01
Chr7 exon 33599827 33599871 33599827 ID=MsG0780037812.01.T01:exon:810;Parent=MsG0780037812.01.T01
Chr7 CDS 33597917 33598051 33597917 ID=MsG0780037812.01.T01:cds;Parent=MsG0780037812.01.T01
Chr7 CDS 33598162 33599028 33598162 ID=MsG0780037812.01.T01:cds;Parent=MsG0780037812.01.T01
Chr7 CDS 33599827 33599871 33599827 ID=MsG0780037812.01.T01:cds;Parent=MsG0780037812.01.T01
Gene Sequence

>MsG0780037812.01.T01

ATGGGTACCCAACCACCGATGACGCGGCATCGTCACCGTCAATCCAACATGCCGCCTTCTGTAACCCTCCCTGATGATCTCAACGGTGAAATCCTATCATGGCTTCCAGTGAAACCATTGATGAAGATGAAGTGTGATGGTGATTGCAGTTTCGTACCTTTTTCTGTTAGCTGTTTACTAGATAACCGCTCGGTCACCCTTCCTAAGGATCCTTACTATCGATTGATCCACAAGGACTGTCGTAGAGTTGTTGGTTCCTGCAATGCATTGGTCTGCTTGCTCAGGTATGATGACGATCAACGTAAAGAGACGTGGCTTCGTTTATGGAACCCCGCCACCAGAACAATATCTGATAAGTTCGGGTATTTACATGATGATATGAATGGATTGAAATATTGGAAGTTTGAGTTTGGTTATAACAATTCAACTAATACTTATAAAGTTGTTGCGTTAAATAGAGGTAGTAATGTGACAACGGAGGTCCAAGTTCTTAGTTTCGGGAATAATATTTGGAGAAAGATTCAAAGTTTCCTTGCCATGCTTCTACAATCATACTGTTATGATCATACCAGGATGTATGCTGGTGTACATTTGAACTGCACTTTTAATTGGTTGGCCATTGTTTGGAATAATAATCTTGATGCTCGATTTGCTATTATTTCACTTGACCTAGGTACGGAGACACACACACAATTTTCGCCTCCTATAATGGATTCTGTGAAGGTGTCAAGTGTACTACCAGGTGTTTGTGCTTTAATGGATTCCCTTTGTTTTTATCATGAGTTTGAGGGAACGGATTTTGTTATATGGAAGATGACAAAATTTGGAGATGAAAATTCTTGGACTCAATTCCTTAAATTTAGCTATCACAATCTTCAAATGAACTTTCAATGTGGTCATTTCAATATTTATGAGAATGATGATACAATGGTATTTGTACACAGCCAACAAGACCGAGCAATTCTCTATGATCGGAGAAATAATAGAGTAGTGAAAACTAGGGGGTGTACGGTCATTCCATCTTACTATCTCGGCGATACTGGTTAA
Protein sequence

>MsG0780037812.01.T01

MGTQPPMTRHRHRQSNMPPSVTLPDDLNGEILSWLPVKPLMKMKCDGDCSFVPFSVSCLLDNRSVTLPKDPYYRLIHKDCRRVVGSCNALVCLLRYDDDQRKETWLRLWNPATRTISDKFGYLHDDMNGLKYWKFEFGYNNSTNTYKVVALNRGSNVTTEVQVLSFGNNIWRKIQSFLAMLLQSYCYDHTRMYAGVHLNCTFNWLAIVWNNNLDARFAIISLDLGTETHTQFSPPIMDSVKVSSVLPGVCALMDSLCFYHEFEGTDFVIWKMTKFGDENSWTQFLKFSYHNLQMNFQCGHFNIYENDDTMVFVHSQQDRAILYDRRNNRVVKTRGCTVIPSYYLGDTG*