AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024406.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024406.01.T01 MTR_5g010610 83.117 462 71 2 3 459 1 460 0.0 776
MsG0580024406.01.T01 MTR_5g010550 79.430 491 67 5 3 460 1 490 0.0 737
MsG0580024406.01.T01 MTR_5g010560 82.090 469 69 5 5 460 6 472 0.0 737
MsG0580024406.01.T01 MTR_5g010550 84.876 443 59 3 26 460 34 476 0.0 727
MsG0580024406.01.T01 MTR_5g010660 68.919 444 75 5 3 439 1 388 0.0 583
MsG0580024406.01.T01 MTR_5g022040 56.795 493 175 10 3 460 1 490 5.35e-171 489
MsG0580024406.01.T01 MTR_5g022900 55.936 497 165 11 3 460 1 482 1.79e-170 488
MsG0580024406.01.T01 MTR_5g021860 56.187 493 155 12 3 454 1 473 6.88e-170 488
MsG0580024406.01.T01 MTR_4g027370 56.098 492 155 11 3 453 1 472 1.91e-169 487
MsG0580024406.01.T01 MTR_5g021880 54.361 493 180 9 3 455 1 488 2.76e-169 485
MsG0580024406.01.T01 MTR_5g021860 57.113 478 144 12 3 439 1 458 3.25e-169 484
MsG0580024406.01.T01 MTR_5g021880 55.136 477 169 9 3 439 1 472 3.04e-168 482
MsG0580024406.01.T01 MTR_5g021880 55.136 477 169 9 3 439 1 472 6.03e-168 483
MsG0580024406.01.T01 MTR_5g022045 54.339 484 170 11 3 460 1 459 3.07e-159 459
MsG0580024406.01.T01 MTR_6g046320 59.033 393 136 9 3 376 1 387 1.24e-143 419
MsG0580024406.01.T01 MTR_7g090810 53.247 462 157 8 3 439 1 428 1.46e-143 417
MsG0580024406.01.T01 MTR_5g007940 49.899 493 167 10 3 460 1 448 1.08e-142 416
MsG0580024406.01.T01 MTR_0627s0010 54.657 408 140 9 3 392 1 381 7.56e-135 395
MsG0580024406.01.T01 MTR_5g022090 48.373 461 152 11 3 439 1 399 1.95e-125 370
MsG0580024406.01.T01 MTR_5g022750 45.570 474 169 14 3 460 1 401 7.51e-110 331
MsG0580024406.01.T01 MTR_7g090810 59.396 298 96 4 182 460 14 305 5.69e-107 320
MsG0580024406.01.T01 MTR_7g117100 51.676 358 131 8 98 439 1 332 6.09e-105 317
MsG0580024406.01.T01 MTR_7g117100 60.289 277 94 4 98 360 1 275 2.24e-104 312
MsG0580024406.01.T01 MTR_5g027330 42.191 493 208 17 3 459 1 452 4.11e-103 315
MsG0580024406.01.T01 MTR_5g027370 42.593 486 205 17 3 459 1 441 3.41e-102 312
MsG0580024406.01.T01 MTR_5g021920 59.191 272 91 7 3 259 1 267 3.90e-91 278
MsG0580024406.01.T01 MTR_3g436150 28.212 358 207 11 31 377 27 345 1.11e-28 117
MsG0580024406.01.T01 MTR_7g407070 29.598 348 203 11 27 367 25 337 2.01e-28 116
MsG0580024406.01.T01 MTR_3g014540 27.874 348 191 17 27 367 21 315 1.40e-26 110
MsG0580024406.01.T01 MTR_3g024040 28.107 338 185 12 42 379 37 316 7.71e-26 108
MsG0580024406.01.T01 MTR_3g006670 27.941 340 185 13 36 367 49 336 2.70e-25 107
MsG0580024406.01.T01 MTR_5g007610 29.107 347 180 13 36 367 41 336 1.04e-24 105
MsG0580024406.01.T01 MTR_3g036335 28.909 339 181 13 36 367 41 326 3.49e-24 104
MsG0580024406.01.T01 MTR_4g055060 26.706 337 197 9 36 367 30 321 6.66e-24 103
MsG0580024406.01.T01 MTR_6g065980 28.060 335 174 12 36 367 16 286 2.05e-23 101
MsG0580024406.01.T01 MTR_3g007330 26.706 337 187 10 35 367 47 327 2.30e-23 102
MsG0580024406.01.T01 MTR_4g107780 27.273 363 180 15 35 381 35 329 7.41e-23 100
MsG0580024406.01.T01 MTR_4g107820 27.824 363 178 16 35 381 35 329 7.84e-23 100
MsG0580024406.01.T01 MTR_3g007360 27.300 337 184 14 40 368 56 339 8.51e-23 100
MsG0580024406.01.T01 MTR_4g107820 27.824 363 178 16 35 381 35 329 9.37e-23 100
MsG0580024406.01.T01 MTR_4g107780 27.824 363 178 16 35 381 35 329 9.37e-23 100
MsG0580024406.01.T01 MTR_3g007410 27.381 336 183 14 40 367 56 338 1.24e-22 99.8
MsG0580024406.01.T01 MTR_3g014570 26.724 348 195 15 27 367 21 315 1.42e-22 99.4
MsG0580024406.01.T01 MTR_3g013740 27.114 343 195 14 36 367 44 342 1.61e-22 99.8
MsG0580024406.01.T01 MTR_2g046900 28.324 346 180 13 36 367 28 319 1.70e-22 99.4
MsG0580024406.01.T01 MTR_3g011100 26.567 335 199 10 36 367 235 525 8.67e-22 98.6
MsG0580024406.01.T01 MTR_1g094210 28.000 375 180 17 11 367 30 332 1.18e-21 97.1
MsG0580024406.01.T01 MTR_3g013770 24.862 362 216 13 9 367 15 323 1.40e-21 96.7
MsG0580024406.01.T01 MTR_1g094210 28.000 375 180 17 11 367 30 332 1.57e-21 96.7
MsG0580024406.01.T01 MTR_6g053260 26.989 352 201 10 22 367 323 624 1.67e-21 98.2
MsG0580024406.01.T01 MTR_1g054575 28.614 339 166 15 36 362 52 326 2.02e-21 97.8
MsG0580024406.01.T01 MTR_4g134560 25.069 363 214 13 35 368 30 363 3.58e-21 96.3
MsG0580024406.01.T01 MTR_4g133170 24.654 361 196 11 35 376 3 306 4.02e-21 95.5
MsG0580024406.01.T01 MTR_3g083640 24.523 367 213 12 9 367 24 334 7.44e-21 94.7
MsG0580024406.01.T01 MTR_5g074870 44.118 102 52 1 1 97 42 143 8.55e-21 89.0
MsG0580024406.01.T01 MTR_3g011060 28.286 350 198 18 36 376 28 333 8.74e-21 94.4
MsG0580024406.01.T01 MTR_5g046300 27.139 339 181 15 36 367 4 283 1.02e-20 93.6
MsG0580024406.01.T01 MTR_5g046290 27.139 339 181 15 36 367 4 283 1.02e-20 93.6
MsG0580024406.01.T01 MTR_3g011020 28.107 338 177 15 36 367 28 305 1.61e-20 93.2
MsG0580024406.01.T01 MTR_1g055375 27.893 337 186 15 40 367 8 296 1.69e-20 93.2
MsG0580024406.01.T01 MTR_3g010920 27.072 362 194 15 9 367 16 310 2.44e-20 92.8
MsG0580024406.01.T01 MTR_3g463170 43.137 102 53 1 1 97 52 153 2.70e-20 88.2
MsG0580024406.01.T01 MTR_5g057790 24.277 346 187 11 36 367 46 330 3.65e-20 92.4
MsG0580024406.01.T01 MTR_6g013270 26.901 342 188 16 36 367 29 318 4.92e-20 92.0
MsG0580024406.01.T01 MTR_2g078900 26.822 343 180 15 35 367 32 313 5.05e-20 91.7
MsG0580024406.01.T01 MTR_2g046800 25.070 355 202 12 36 367 14 327 6.39e-20 91.7
MsG0580024406.01.T01 MTR_6g048140 28.198 344 190 15 31 367 34 327 7.08e-20 91.7
MsG0580024406.01.T01 MTR_5g057710 26.301 346 180 13 36 367 46 330 7.76e-20 91.7
MsG0580024406.01.T01 MTR_4g031770 27.168 346 178 13 36 367 4 289 9.34e-20 90.9
MsG0580024406.01.T01 MTR_2g046920 27.679 336 181 12 36 364 24 304 9.55e-20 90.9
MsG0580024406.01.T01 MTR_3g007270 24.332 337 210 7 36 367 47 343 1.15e-19 91.3
MsG0580024406.01.T01 MTR_3g009240 24.119 369 223 10 3 367 1 316 1.31e-19 90.9
MsG0580024406.01.T01 MTR_1g050542 25.225 333 183 10 36 362 58 330 1.53e-19 90.9
MsG0580024406.01.T01 MTR_3g006570 26.844 339 187 16 36 367 21 305 4.41e-19 89.0
MsG0580024406.01.T01 MTR_7g007300 27.485 342 172 14 36 367 103 378 4.93e-19 89.7
MsG0580024406.01.T01 MTR_3g010390 24.642 349 222 10 31 373 28 341 6.52e-19 89.0
MsG0580024406.01.T01 MTR_5g022420 25.208 361 184 12 36 382 27 315 6.89e-19 88.6
MsG0580024406.01.T01 MTR_3g024150 27.326 344 177 18 33 367 37 316 9.24e-19 88.2
MsG0580024406.01.T01 MTR_4g061340 24.047 341 199 12 36 367 26 315 1.48e-18 87.4
MsG0580024406.01.T01 MTR_3g024110 24.629 337 191 11 35 367 100 377 2.15e-18 87.8
MsG0580024406.01.T01 MTR_1g115160 27.246 345 171 17 35 367 21 297 2.25e-18 87.0
MsG0580024406.01.T01 MTR_7g061050 27.479 353 181 16 36 367 13 311 2.61e-18 87.0
MsG0580024406.01.T01 MTR_8g101580 27.679 336 183 16 36 364 45 327 2.92e-18 87.0
MsG0580024406.01.T01 MTR_6g021880 26.444 329 191 12 47 367 31 316 3.12e-18 86.7
MsG0580024406.01.T01 MTR_6g007135 25.393 382 221 15 15 379 5 339 4.04e-18 86.3
MsG0580024406.01.T01 MTR_5g011200 25.424 354 204 14 22 367 4 305 5.46e-18 85.9
MsG0580024406.01.T01 MTR_6g027910 27.679 336 187 15 40 362 13 305 6.87e-18 85.5
MsG0580024406.01.T01 MTR_7g061060 27.247 356 181 14 36 367 13 314 7.43e-18 85.5
MsG0580024406.01.T01 MTR_0760s0010 27.381 336 168 16 42 367 53 322 7.68e-18 85.5
MsG0580024406.01.T01 MTR_2g021155 26.923 338 192 14 36 367 33 321 9.69e-18 86.7
MsG0580024406.01.T01 MTR_2g031720 25.070 359 203 14 36 376 6 316 1.04e-17 85.1
MsG0580024406.01.T01 MTR_6g053240 24.781 343 207 10 31 367 23 320 1.17e-17 85.1
MsG0580024406.01.T01 MTR_7g052150 26.111 360 184 15 36 371 22 323 1.27e-17 85.1
MsG0580024406.01.T01 MTR_3g036290 25.672 335 183 11 36 367 22 293 1.44e-17 84.3
MsG0580024406.01.T01 MTR_7g061090 25.606 371 200 14 36 377 22 345 1.55e-17 84.7
MsG0580024406.01.T01 MTR_3g007430 24.561 342 186 12 39 367 46 328 1.85e-17 84.3
MsG0580024406.01.T01 MTR_4g033495 25.915 355 191 16 36 367 27 332 2.69e-17 84.3
MsG0580024406.01.T01 MTR_0115s0020 23.580 352 228 9 28 367 2 324 4.92e-17 83.2
MsG0580024406.01.T01 MTR_1g056710 24.528 371 209 16 3 361 1 312 5.17e-17 83.2
MsG0580024406.01.T01 MTR_3g010590 26.100 341 184 15 31 367 34 310 5.49e-17 82.8
MsG0580024406.01.T01 MTR_0044s0300 26.790 377 193 16 8 367 9 319 7.28e-17 82.4
MsG0580024406.01.T01 MTR_0064s0160 23.501 417 268 12 23 417 29 416 8.27e-17 82.8
MsG0580024406.01.T01 MTR_2g046830 25.740 338 191 10 36 367 25 308 1.78e-16 81.6
MsG0580024406.01.T01 MTR_3g013950 25.978 358 184 16 40 367 10 316 2.17e-16 81.3
MsG0580024406.01.T01 MTR_3g010620 26.923 338 178 14 33 369 38 307 2.34e-16 80.9
MsG0580024406.01.T01 MTR_4g129160 27.147 361 196 18 36 367 7 329 2.36e-16 80.9
MsG0580024406.01.T01 MTR_6g004660 25.978 358 201 16 36 378 16 324 2.47e-16 80.9
MsG0580024406.01.T01 MTR_5g009060 26.163 344 222 13 36 370 25 345 2.56e-16 80.9
MsG0580024406.01.T01 MTR_2g021190 25.513 341 200 14 32 367 17 308 3.14e-16 80.5
MsG0580024406.01.T01 MTR_1g097560 28.012 332 176 14 36 364 36 307 3.28e-16 80.5
MsG0580024406.01.T01 MTR_1g115185 26.361 349 194 15 40 383 43 333 7.02e-16 79.7
MsG0580024406.01.T01 MTR_7g056820 25.405 370 191 18 36 378 7 318 7.42e-16 79.3
MsG0580024406.01.T01 MTR_1g054725 25.070 359 176 14 35 367 19 310 7.90e-16 79.3
MsG0580024406.01.T01 MTR_3g010970 26.765 340 175 16 33 367 50 320 9.48e-16 79.3
MsG0580024406.01.T01 MTR_3g034180 25.337 371 200 14 36 385 123 437 1.15e-15 79.3
MsG0580024406.01.T01 MTR_2g028110 23.757 362 202 12 35 376 3 310 1.39e-15 78.6
MsG0580024406.01.T01 MTR_3g006530 23.796 353 206 13 36 378 40 339 1.68e-15 78.6
MsG0580024406.01.T01 MTR_2g047832 25.419 358 187 11 36 367 29 332 1.88e-15 78.6
MsG0580024406.01.T01 MTR_3g030250 25.071 351 200 13 16 365 20 308 2.26e-15 77.8
MsG0580024406.01.T01 MTR_7g066100 25.967 362 191 14 36 367 11 325 5.68e-15 77.0
MsG0580024406.01.T01 MTR_2g021050 24.269 342 196 11 35 370 4 288 9.19e-15 76.3
MsG0580024406.01.T01 MTR_6g048120 23.529 340 209 11 35 367 35 330 9.76e-15 76.3
MsG0580024406.01.T01 MTR_3g009260 24.862 362 198 15 16 367 21 318 1.21e-14 75.9
MsG0580024406.01.T01 MTR_8g064890 23.706 367 213 13 21 367 4 323 1.30e-14 75.9
MsG0580024406.01.T01 MTR_7g066000 24.444 360 206 14 36 374 25 339 1.86e-14 75.5
MsG0580024406.01.T01 MTR_0464s0020 24.865 370 209 13 36 376 23 352 1.87e-14 75.5
MsG0580024406.01.T01 MTR_7g066850 23.446 354 195 13 36 367 23 322 2.49e-14 75.1
MsG0580024406.01.T01 MTR_7g070440 22.059 340 202 9 40 364 11 302 3.37e-14 74.3
MsG0580024406.01.T01 MTR_4g080200 23.162 272 159 11 143 383 48 300 1.66e-13 72.0
MsG0580024406.01.T01 MTR_2g028140 24.457 368 225 12 36 384 5 338 1.92e-13 72.4
MsG0580024406.01.T01 MTR_3g030350 23.235 340 195 14 36 367 35 316 2.76e-13 71.6
MsG0580024406.01.T01 MTR_6g004210 25.434 346 190 18 47 367 36 338 2.88e-13 71.6
MsG0580024406.01.T01 MTR_7g056003 23.784 370 200 14 36 376 15 331 3.96e-13 71.2
MsG0580024406.01.T01 MTR_0667s0010 23.580 352 202 13 34 367 4 306 4.87e-13 70.9
MsG0580024406.01.T01 MTR_3g030320 27.650 217 130 9 165 377 44 237 6.44e-13 69.7
MsG0580024406.01.T01 MTR_2g021252 24.242 330 190 15 39 367 50 320 7.28e-13 70.5
MsG0580024406.01.T01 MTR_5g096910 24.259 371 241 12 10 377 3 336 8.62e-13 70.1
MsG0580024406.01.T01 MTR_5g046280 27.670 206 122 10 167 367 3 186 1.15e-12 68.2
MsG0580024406.01.T01 MTR_7g017130 25.501 349 209 15 34 365 16 330 1.22e-12 69.7
MsG0580024406.01.T01 MTR_7g017170 25.501 349 209 15 34 365 16 330 1.35e-12 69.7
MsG0580024406.01.T01 MTR_2g031640 30.126 239 135 13 159 376 85 312 1.61e-12 69.3
MsG0580024406.01.T01 MTR_4g070550 23.932 351 208 13 36 367 5 315 4.71e-12 67.8
MsG0580024406.01.T01 MTR_2g078870 27.313 227 134 9 146 367 36 236 4.86e-12 67.0
MsG0580024406.01.T01 MTR_1g068860 23.823 361 211 12 35 384 3 310 5.95e-12 67.4
MsG0580024406.01.T01 MTR_2g028130 23.143 350 218 11 36 370 5 318 6.37e-12 67.4
MsG0580024406.01.T01 MTR_2g026010 26.316 228 140 8 157 367 81 297 6.78e-12 67.4
MsG0580024406.01.T01 MTR_6g055210 25.275 364 191 16 36 368 22 335 7.20e-12 67.4
MsG0580024406.01.T01 MTR_2g028160 23.099 355 226 15 36 377 5 325 8.05e-12 67.4
MsG0580024406.01.T01 MTR_3g010450 27.500 280 146 13 42 318 3 228 9.07e-12 65.5
MsG0580024406.01.T01 MTR_7g062060 22.520 373 214 14 36 376 12 341 2.40e-11 65.9
MsG0580024406.01.T01 MTR_0134s0060 25.000 376 198 16 36 367 12 347 2.97e-11 65.5
MsG0580024406.01.T01 MTR_7g066010 24.383 324 163 14 23 311 8 284 6.14e-11 64.3
MsG0580024406.01.T01 MTR_2g425980 20.912 373 225 10 35 384 4 329 8.73e-11 63.9
MsG0580024406.01.T01 MTR_3g083010 24.022 358 214 14 34 370 4 324 9.82e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024406.01.T01 AT3G07870 25.978 358 200 11 33 373 25 334 3.50e-22 99.0
MsG0580024406.01.T01 AT3G06240 27.350 351 202 14 36 364 36 355 8.74e-21 94.7
MsG0580024406.01.T01 AT3G16210 26.071 280 144 12 36 312 5 224 6.43e-15 76.6
MsG0580024406.01.T01 AT1G53370 26.354 277 152 12 32 304 24 252 5.72e-12 67.4

Find 93 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTTATATTCATCAGTTT+TGG 0.159504 5:-4408809 None:intergenic
TTGCTTTAGTGCTGCATCTT+TGG 0.225505 5:-4408204 None:intergenic
GGGAAGCTTTAGGAGAATTT+TGG 0.258504 5:-4408278 None:intergenic
CTTGATCACCTTATATGATT+TGG 0.260610 5:-4408566 None:intergenic
ACATATGAGAAGAGACTTAA+TGG 0.273797 5:-4408299 None:intergenic
ATTGTGAATTCCCTCGTTAC+TGG 0.287405 5:-4408715 None:intergenic
TCAAACAATATGTTGATATA+TGG 0.296158 5:-4410534 None:intergenic
TGATACTTCGCTCACTCGTT+TGG 0.299331 5:+4409254 MsG0580024406.01.T01:CDS
GTAGATGTGTGTGCAAAATT+TGG 0.300297 5:+4408320 MsG0580024406.01.T01:CDS
ACCCAAAACTGATGAATATA+AGG 0.306297 5:+4408807 MsG0580024406.01.T01:CDS
GCTCGGGTACAAGCTGGTTT+TGG 0.311706 5:+4408778 MsG0580024406.01.T01:CDS
CCTTCTCCTCCACATGTGTT+TGG 0.312967 5:+4409075 MsG0580024406.01.T01:CDS
GAGACTTAATGGGAAGCTTT+AGG 0.316645 5:-4408288 None:intergenic
CCAATCTAATAGGCATGTTA+TGG 0.319328 5:-4409119 None:intergenic
ATGTGGGTTATGAAAGAATA+TGG 0.330754 5:+4409198 MsG0580024406.01.T01:CDS
GTGTTTGGAAATCATGATAA+TGG 0.336058 5:+4409090 MsG0580024406.01.T01:CDS
CCATAACATGCCTATTAGAT+TGG 0.343911 5:+4409119 MsG0580024406.01.T01:CDS
AAATGACGCCAAATCATATA+AGG 0.351050 5:+4408558 MsG0580024406.01.T01:CDS
TTGTGGTGACATATCATCTA+TGG 0.357768 5:+4408531 MsG0580024406.01.T01:CDS
GATACTTCGCTCACTCGTTT+GGG 0.359670 5:+4409255 MsG0580024406.01.T01:CDS
TTCAATTCTCCCAATCTAAT+AGG 0.362989 5:-4409129 None:intergenic
ATATTCGAGCTTCCTCTTTG+TGG 0.366214 5:+4408514 MsG0580024406.01.T01:CDS
ACTTTGAACCCTTGTTTCTC+AGG 0.381708 5:-4409330 None:intergenic
CAATCTAATAGGCATGTTAT+GGG 0.390921 5:-4409118 None:intergenic
GATGGAAGATTATCAAAGTA+AGG 0.426538 5:-4408244 None:intergenic
CAAAGAGGAAGCTCGAATAT+AGG 0.438992 5:-4408511 None:intergenic
ACTTCAAGTAGTGACAAGTT+TGG 0.444787 5:+4408619 MsG0580024406.01.T01:CDS
GAACCTGAAAAGTTTGAGAT+TGG 0.449510 5:+4408463 MsG0580024406.01.T01:CDS
ATTCAAGGGACAACTTTAAG+AGG 0.454804 5:+4409360 MsG0580024406.01.T01:CDS
TGTTTATCTGAAACATCTAC+TGG 0.455409 5:+4408670 MsG0580024406.01.T01:CDS
TATTAGATTGGGAGAATTGA+AGG 0.456228 5:+4409131 MsG0580024406.01.T01:CDS
ACCCTTGTTTCTCAGGTTCG+TGG 0.459568 5:-4409323 None:intergenic
CATAACATGCCTATTAGATT+GGG 0.461483 5:+4409120 MsG0580024406.01.T01:CDS
GTGTGAATGGCGCACTTCAT+TGG 0.461504 5:+4408980 MsG0580024406.01.T01:CDS
ATTCGAAAATTAGACGATAT+AGG 0.464392 5:+4408409 MsG0580024406.01.T01:CDS
TCGGAAGTCGTAGTAAGTTC+AGG 0.471594 5:-4408742 None:intergenic
CTTTGGATAGTAGCCCTTGG+TGG 0.472713 5:-4408187 None:intergenic
CCGACTGGTTTAACACTGCT+CGG 0.484571 5:+4408761 MsG0580024406.01.T01:CDS
TTGAATCCAACGTGTGTGAA+TGG 0.492606 5:+4408967 MsG0580024406.01.T01:CDS
TTTGGATAGTAGCCCTTGGT+GGG 0.494089 5:-4408186 None:intergenic
ACTGGGTTGCAAATTGCTAA+AGG 0.500107 5:-4408697 None:intergenic
CATCTTTGGATAGTAGCCCT+TGG 0.500894 5:-4408190 None:intergenic
TATCCTGATCTGTGGTGTTG+TGG 0.501298 5:+4409279 MsG0580024406.01.T01:CDS
AAACCACAACACCACAGATC+AGG 0.503061 5:-4409282 None:intergenic
TTGTGAATTCCCTCGTTACT+GGG 0.503153 5:-4408714 None:intergenic
ACTTCAACATTTCTCCATGA+TGG 0.505060 5:-4408916 None:intergenic
ATTTGCAATTTAGCGAATTG+TGG 0.515459 5:-4408361 None:intergenic
TCAGGTTCGTGGTGTTTAGA+CGG 0.518208 5:-4409312 None:intergenic
ACTGGCCATGAAAAGAAGAA+AGG 0.519271 5:+4408153 None:intergenic
AACTTACTACGACTTCCGAC+TGG 0.523204 5:+4408746 MsG0580024406.01.T01:CDS
GGCATTGTGAATTCTTGCAA+TGG 0.523377 5:+4408640 MsG0580024406.01.T01:CDS
CATATGAGAAGAGACTTAAT+GGG 0.523652 5:-4408298 None:intergenic
AACACTGCTCGGGTACAAGC+TGG 0.523956 5:+4408772 MsG0580024406.01.T01:CDS
CGACTGGTTTAACACTGCTC+GGG 0.524477 5:+4408762 MsG0580024406.01.T01:CDS
TTTCAGGTTCGCACTCAAGA+AGG 0.529734 5:-4408450 None:intergenic
GCAAGTAATATAACGCCGCT+TGG 0.530083 5:-4408596 None:intergenic
CTGGCCATGAAAAGAAGAAA+GGG 0.530999 5:+4408154 MsG0580024406.01.T01:CDS
TTTCGAGAATGTTACAATGT+GGG 0.536837 5:+4409182 MsG0580024406.01.T01:CDS
TTTCGAATCATGAAACTGAC+TGG 0.541011 5:-4408394 None:intergenic
CCAAACACATGTGGAGGAGA+AGG 0.541884 5:-4409075 None:intergenic
AATATGGCATTGGAGAATCA+TGG 0.550479 5:+4409214 MsG0580024406.01.T01:CDS
GTTATGAAAGAATATGGCAT+TGG 0.563407 5:+4409204 MsG0580024406.01.T01:CDS
TCGTTCAATGAAATTAGACT+TGG 0.572755 5:-4409405 None:intergenic
ATGGAAGATTATCAAAGTAA+GGG 0.576784 5:-4408243 None:intergenic
AGCTACATTTGTACCATGAG+TGG 0.579705 5:-4409464 None:intergenic
ATTAGATTGGGAGAATTGAA+GGG 0.585464 5:+4409132 MsG0580024406.01.T01:CDS
CACCACGAACCTGAGAAACA+AGG 0.594879 5:+4409321 MsG0580024406.01.T01:CDS
CAATTTGCAACCCAGTAACG+AGG 0.600062 5:+4408704 MsG0580024406.01.T01:CDS
CTTTCGAGAATGTTACAATG+TGG 0.601443 5:+4409181 MsG0580024406.01.T01:CDS
ACACGCTCGGAATACCATCA+TGG 0.611164 5:+4408902 MsG0580024406.01.T01:CDS
TCATGATTTCCAAACACATG+TGG 0.612663 5:-4409084 None:intergenic
ATCATGGAGAAATGTTGAAG+TGG 0.615193 5:+4408918 MsG0580024406.01.T01:CDS
AATATAAGGTGATCATAATG+TGG 0.616656 5:+4408821 MsG0580024406.01.T01:CDS
TGATTTCCAAACACATGTGG+AGG 0.617145 5:-4409081 None:intergenic
CTACACGCTCAAACACCATA+CGG 0.621082 5:-4408867 None:intergenic
ATGTGTTGAACACCCACTCA+TGG 0.626884 5:+4409451 MsG0580024406.01.T01:CDS
CCGAGCAGTGTTAAACCAGT+CGG 0.630980 5:-4408761 None:intergenic
GATGATATGTCACCACAAAG+AGG 0.636680 5:-4408526 None:intergenic
GCTACATTTGTACCATGAGT+GGG 0.637920 5:-4409463 None:intergenic
AATCTAATAGGCATGTTATG+GGG 0.646998 5:-4409117 None:intergenic
ACCACGAACCTGAGAAACAA+GGG 0.650539 5:+4409322 MsG0580024406.01.T01:CDS
GGTGGGAAAACGATATTACG+TGG 0.661530 5:+4410492 MsG0580024406.01.T01:intron
GGGTTCAATTACCCCACCAA+GGG 0.661683 5:+4408174 MsG0580024406.01.T01:CDS
GTGGGAAAACGATATTACGT+GGG 0.667649 5:+4410493 MsG0580024406.01.T01:CDS
GTGCTCGAGATACACACGCT+CGG 0.672975 5:+4408889 MsG0580024406.01.T01:CDS
AATTTGCAACCCAGTAACGA+GGG 0.673900 5:+4408705 MsG0580024406.01.T01:CDS
AGGGTTCAATTACCCCACCA+AGG 0.674978 5:+4408173 MsG0580024406.01.T01:CDS
TGTTAGACGAGATAACCGTA+TGG 0.677365 5:+4408852 MsG0580024406.01.T01:CDS
TTGGATAGTAGCCCTTGGTG+GGG 0.684403 5:-4408185 None:intergenic
AGTGCGCCATTCACACACGT+TGG 0.689998 5:-4408973 None:intergenic
GTTTGGGCTATCCTGATCTG+TGG 0.696434 5:+4409271 MsG0580024406.01.T01:CDS
TGGGAAAACGATATTACGTG+GGG 0.716504 5:+4410494 MsG0580024406.01.T01:CDS
TGATCAAGAATAAATCCAAG+CGG 0.728151 5:+4408581 MsG0580024406.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTTTTAATTTTTTGT+AGG + Chr5:4410471-4410490 MsG0580024406.01.T01:intron 10.0%
!! AGATGTAATTATTAACAAAT+AGG - Chr5:4409952-4409971 None:intergenic 15.0%
!! AAAACAAAATTAAGGAACAA+TGG - Chr5:4410461-4410480 None:intergenic 20.0%
!! ATTTATCTTATAAATGTCGT+TGG + Chr5:4409977-4409996 MsG0580024406.01.T01:intron 20.0%
!! TCAAACAATATGTTGATATA+TGG - Chr5:4410537-4410556 None:intergenic 20.0%
!! TTTATCTTATAAATGTCGTT+GGG + Chr5:4409978-4409997 MsG0580024406.01.T01:intron 20.0%
!! TTTGTTAAAAAGTTCTACAT+TGG - Chr5:4410287-4410306 None:intergenic 20.0%
!!! ACAAATTCCTTTATACTTTT+TGG + Chr5:4410302-4410321 MsG0580024406.01.T01:intron 20.0%
!!! TGTTTTAATTTTTTGTAGGT+GGG + Chr5:4410475-4410494 MsG0580024406.01.T01:intron 20.0%
!!! TTGTTTTAATTTTTTGTAGG+TGG + Chr5:4410474-4410493 MsG0580024406.01.T01:intron 20.0%
! AATATAAGGTGATCATAATG+TGG + Chr5:4408821-4408840 MsG0580024406.01.T01:CDS 25.0%
! AGCTAAGATGTAATTAAAGA+CGG - Chr5:4409699-4409718 None:intergenic 25.0%
! AGCTTCAAAAAAGAAATTTG+AGG - Chr5:4408946-4408965 None:intergenic 25.0%
! ATGGAAGATTATCAAAGTAA+GGG - Chr5:4408246-4408265 None:intergenic 25.0%
! ATTCGAAAATTAGACGATAT+AGG + Chr5:4408409-4408428 MsG0580024406.01.T01:CDS 25.0%
! ATTTAACCCAATAAGAGAAT+TGG - Chr5:4409806-4409825 None:intergenic 25.0%
! ATTTATCTTAGAAATGTCGT+TGG + Chr5:4410181-4410200 MsG0580024406.01.T01:intron 25.0%
! TCTAATATTCACTCTCTTAT+CGG - Chr5:4409894-4409913 None:intergenic 25.0%
! TCTATACAAGTGTTTATATG+CGG - Chr5:4410253-4410272 None:intergenic 25.0%
! TTTATCTTAGAAATGTCGTT+GGG + Chr5:4410182-4410201 MsG0580024406.01.T01:intron 25.0%
!! ACCTTATATTCATCAGTTTT+GGG - Chr5:4408811-4408830 None:intergenic 25.0%
!! CATCAATCCAAAAAGTATAA+AGG - Chr5:4410312-4410331 None:intergenic 25.0%
!!! CTTTATACTTTTTGGATTGA+TGG + Chr5:4410310-4410329 MsG0580024406.01.T01:intron 25.0%
!!! TCAAAGTTTTTCGAATTCAA+GGG + Chr5:4409346-4409365 MsG0580024406.01.T01:CDS 25.0%
!!! TTCAAAGTTTTTCGAATTCA+AGG + Chr5:4409345-4409364 MsG0580024406.01.T01:CDS 25.0%
AAATGACGCCAAATCATATA+AGG + Chr5:4408558-4408577 MsG0580024406.01.T01:CDS 30.0%
AATCTAATAGGCATGTTATG+GGG - Chr5:4409120-4409139 None:intergenic 30.0%
ACATATGAGAAGAGACTTAA+TGG - Chr5:4408302-4408321 None:intergenic 30.0%
ACCCAAAACTGATGAATATA+AGG + Chr5:4408807-4408826 MsG0580024406.01.T01:CDS 30.0%
AGCTATAACTGCAATTTGTA+GGG - Chr5:4410426-4410445 None:intergenic 30.0%
ATCTTCGTTGTTCAAAAAAG+TGG - Chr5:4409616-4409635 None:intergenic 30.0%
ATGGATAGTTGTTGTAATGT+CGG + Chr5:4410344-4410363 MsG0580024406.01.T01:intron 30.0%
ATGTGTATTTAACCCATTTG+TGG - Chr5:4410016-4410035 None:intergenic 30.0%
ATTAGATTGGGAGAATTGAA+GGG + Chr5:4409132-4409151 MsG0580024406.01.T01:CDS 30.0%
ATTTGCAATTTAGCGAATTG+TGG - Chr5:4408364-4408383 None:intergenic 30.0%
CAATCTAATAGGCATGTTAT+GGG - Chr5:4409121-4409140 None:intergenic 30.0%
CATAACATGCCTATTAGATT+GGG + Chr5:4409120-4409139 MsG0580024406.01.T01:CDS 30.0%
CATATGAGAAGAGACTTAAT+GGG - Chr5:4408301-4408320 None:intergenic 30.0%
CTATACAAGTGTTTATATGC+GGG - Chr5:4410252-4410271 None:intergenic 30.0%
CTTGATCACCTTATATGATT+TGG - Chr5:4408569-4408588 None:intergenic 30.0%
GAGTGAATATTAGAATGAAG+AGG + Chr5:4409900-4409919 MsG0580024406.01.T01:intron 30.0%
GATGGAAGATTATCAAAGTA+AGG - Chr5:4408247-4408266 None:intergenic 30.0%
GTGTTTGGAAATCATGATAA+TGG + Chr5:4409090-4409109 MsG0580024406.01.T01:CDS 30.0%
GTTATGAAAGAATATGGCAT+TGG + Chr5:4409204-4409223 MsG0580024406.01.T01:CDS 30.0%
TAGCTATAACTGCAATTTGT+AGG - Chr5:4410427-4410446 None:intergenic 30.0%
TATACAAGTGTTTATATGCG+GGG - Chr5:4410251-4410270 None:intergenic 30.0%
TATCTATAACTCAACAACGA+AGG - Chr5:4410382-4410401 None:intergenic 30.0%
TATTAGATTGGGAGAATTGA+AGG + Chr5:4409131-4409150 MsG0580024406.01.T01:CDS 30.0%
TCATAAGACGAAGATTCAAT+GGG + Chr5:4409549-4409568 MsG0580024406.01.T01:intron 30.0%
TCGTTCAATGAAATTAGACT+TGG - Chr5:4409408-4409427 None:intergenic 30.0%
TGATCAAGAATAAATCCAAG+CGG + Chr5:4408581-4408600 MsG0580024406.01.T01:CDS 30.0%
TTCAATTCTCCCAATCTAAT+AGG - Chr5:4409132-4409151 None:intergenic 30.0%
TTTCGAGAATGTTACAATGT+GGG + Chr5:4409182-4409201 MsG0580024406.01.T01:CDS 30.0%
! ATGTGGGTTATGAAAGAATA+TGG + Chr5:4409198-4409217 MsG0580024406.01.T01:CDS 30.0%
! CACCTTATATTCATCAGTTT+TGG - Chr5:4408812-4408831 None:intergenic 30.0%
! TGTTTATCTGAAACATCTAC+TGG + Chr5:4408670-4408689 MsG0580024406.01.T01:CDS 30.0%
!! ATGTCGACTCAATTATTTGT+TGG + Chr5:4409738-4409757 MsG0580024406.01.T01:intron 30.0%
!! ATTTTGGTAGTTAAGTGAGA+TGG - Chr5:4408265-4408284 None:intergenic 30.0%
!! GTTTCAATTTTGAAAGTGAG+AGG + Chr5:4409040-4409059 MsG0580024406.01.T01:CDS 30.0%
!! TATACTTTTTGGATTGATGG+AGG + Chr5:4410313-4410332 MsG0580024406.01.T01:intron 30.0%
!!! TATATTCATCAGTTTTGGGT+TGG - Chr5:4408807-4408826 None:intergenic 30.0%
ACTTCAACATTTCTCCATGA+TGG - Chr5:4408919-4408938 None:intergenic 35.0%
ACTTCAAGTAGTGACAAGTT+TGG + Chr5:4408619-4408638 MsG0580024406.01.T01:CDS 35.0%
ATACAAGTGTTTATATGCGG+GGG - Chr5:4410250-4410269 None:intergenic 35.0%
ATCATGGAGAAATGTTGAAG+TGG + Chr5:4408918-4408937 MsG0580024406.01.T01:CDS 35.0%
ATTCAAGGGACAACTTTAAG+AGG + Chr5:4409360-4409379 MsG0580024406.01.T01:CDS 35.0%
ATTTAACCCATTTGTGGAGT+TGG - Chr5:4410010-4410029 None:intergenic 35.0%
CCAATCTAATAGGCATGTTA+TGG - Chr5:4409122-4409141 None:intergenic 35.0%
CCATAACATGCCTATTAGAT+TGG + Chr5:4409119-4409138 MsG0580024406.01.T01:CDS 35.0%
CTACCACCAATTCTCTTATT+GGG + Chr5:4409797-4409816 MsG0580024406.01.T01:intron 35.0%
CTCATAAGACGAAGATTCAA+TGG + Chr5:4409548-4409567 MsG0580024406.01.T01:intron 35.0%
CTTATCGGTGAAATACATGT+AGG - Chr5:4409879-4409898 None:intergenic 35.0%
CTTTCGAGAATGTTACAATG+TGG + Chr5:4409181-4409200 MsG0580024406.01.T01:CDS 35.0%
GCTATAACTGCAATTTGTAG+GGG - Chr5:4410425-4410444 None:intergenic 35.0%
GTAGATGTGTGTGCAAAATT+TGG + Chr5:4408320-4408339 MsG0580024406.01.T01:CDS 35.0%
GTTCTACATTGGATAAGAGA+TGG - Chr5:4410276-4410295 None:intergenic 35.0%
TAACCCAATAAGAGAATTGG+TGG - Chr5:4409803-4409822 None:intergenic 35.0%
TCATGATTTCCAAACACATG+TGG - Chr5:4409087-4409106 None:intergenic 35.0%
TCTACCACCAATTCTCTTAT+TGG + Chr5:4409796-4409815 MsG0580024406.01.T01:intron 35.0%
TTGTGGTGACATATCATCTA+TGG + Chr5:4408531-4408550 MsG0580024406.01.T01:CDS 35.0%
TTTAACCCATTTGTGGAGTT+GGG - Chr5:4410009-4410028 None:intergenic 35.0%
TTTCGAATCATGAAACTGAC+TGG - Chr5:4408397-4408416 None:intergenic 35.0%
! AATATGGCATTGGAGAATCA+TGG + Chr5:4409214-4409233 MsG0580024406.01.T01:CDS 35.0%
! CTTCCAATCTCAAACTTTTC+AGG - Chr5:4408469-4408488 None:intergenic 35.0%
! GAACCTGAAAAGTTTGAGAT+TGG + Chr5:4408463-4408482 MsG0580024406.01.T01:CDS 35.0%
! TGAACCCTTTCTTCTTTTCA+TGG - Chr5:4408161-4408180 None:intergenic 35.0%
!!! GTTGTTGTAATGTCGGTTTT+TGG + Chr5:4410351-4410370 MsG0580024406.01.T01:intron 35.0%
AATTTGCAACCCAGTAACGA+GGG + Chr5:4408705-4408724 MsG0580024406.01.T01:CDS 40.0%
ACATGTAGGTCCTATCACTT+TGG - Chr5:4409865-4409884 None:intergenic 40.0%
ACTGGGTTGCAAATTGCTAA+AGG - Chr5:4408700-4408719 None:intergenic 40.0%
AGACTCGTTTCCAAAGTGAT+AGG + Chr5:4409852-4409871 MsG0580024406.01.T01:intron 40.0%
AGCTACATTTGTACCATGAG+TGG - Chr5:4409467-4409486 None:intergenic 40.0%
ATATTCGAGCTTCCTCTTTG+TGG + Chr5:4408514-4408533 MsG0580024406.01.T01:CDS 40.0%
ATTGATGGAGGAGGAGAAAA+TGG + Chr5:4410325-4410344 MsG0580024406.01.T01:intron 40.0%
ATTGTGAATTCCCTCGTTAC+TGG - Chr5:4408718-4408737 None:intergenic 40.0%
CAAAGAGGAAGCTCGAATAT+AGG - Chr5:4408514-4408533 None:intergenic 40.0%
CTGGCCATGAAAAGAAGAAA+GGG + Chr5:4408154-4408173 MsG0580024406.01.T01:CDS 40.0%
GAAACGAGTCTCACATATAG+TGG - Chr5:4409843-4409862 None:intergenic 40.0%
GAGACTTAATGGGAAGCTTT+AGG - Chr5:4408291-4408310 None:intergenic 40.0%
GATGATATGTCACCACAAAG+AGG - Chr5:4408529-4408548 None:intergenic 40.0%
GCTACATTTGTACCATGAGT+GGG - Chr5:4409466-4409485 None:intergenic 40.0%
GGCATTGTGAATTCTTGCAA+TGG + Chr5:4408640-4408659 MsG0580024406.01.T01:CDS 40.0%
GTGGGAAAACGATATTACGT+GGG + Chr5:4410493-4410512 MsG0580024406.01.T01:CDS 40.0%
TAACTGCAATTTGTAGGGGA+TGG - Chr5:4410421-4410440 None:intergenic 40.0%
TCTTACCCAACTCCACAAAT+GGG + Chr5:4410001-4410020 MsG0580024406.01.T01:intron 40.0%
TGATTTCCAAACACATGTGG+AGG - Chr5:4409084-4409103 None:intergenic 40.0%
TGGGAAAACGATATTACGTG+GGG + Chr5:4410494-4410513 MsG0580024406.01.T01:CDS 40.0%
TGTTAGACGAGATAACCGTA+TGG + Chr5:4408852-4408871 MsG0580024406.01.T01:CDS 40.0%
TTGAATCCAACGTGTGTGAA+TGG + Chr5:4408967-4408986 MsG0580024406.01.T01:CDS 40.0%
TTGCTTTAGTGCTGCATCTT+TGG - Chr5:4408207-4408226 None:intergenic 40.0%
TTGTGAATTCCCTCGTTACT+GGG - Chr5:4408717-4408736 None:intergenic 40.0%
! ACAAAACTGGCTTAAGAGGT+GGG + Chr5:4410219-4410238 MsG0580024406.01.T01:intron 40.0%
! ACTTTGAACCCTTGTTTCTC+AGG - Chr5:4409333-4409352 None:intergenic 40.0%
! ACTTTTTGGATTGATGGAGG+AGG + Chr5:4410316-4410335 MsG0580024406.01.T01:intron 40.0%
!! TAAGCCAGTTTTGTGGAGTT+GGG - Chr5:4410213-4410232 None:intergenic 40.0%
!! TTAAGCCAGTTTTGTGGAGT+TGG - Chr5:4410214-4410233 None:intergenic 40.0%
!!! GGGAAGCTTTAGGAGAATTT+TGG - Chr5:4408281-4408300 None:intergenic 40.0%
!!! TGTGGTGTTGTGGTTTTTGT+TGG + Chr5:4409289-4409308 MsG0580024406.01.T01:CDS 40.0%
AAACCACAACACCACAGATC+AGG - Chr5:4409285-4409304 None:intergenic 45.0%
AACTTACTACGACTTCCGAC+TGG + Chr5:4408746-4408765 MsG0580024406.01.T01:CDS 45.0%
ACCACGAACCTGAGAAACAA+GGG + Chr5:4409322-4409341 MsG0580024406.01.T01:CDS 45.0%
ACGAGTCTCACATATAGTGG+TGG - Chr5:4409840-4409859 None:intergenic 45.0%
ATGTGTTGAACACCCACTCA+TGG + Chr5:4409451-4409470 MsG0580024406.01.T01:CDS 45.0%
CAATTTGCAACCCAGTAACG+AGG + Chr5:4408704-4408723 MsG0580024406.01.T01:CDS 45.0%
CATCTTTGGATAGTAGCCCT+TGG - Chr5:4408193-4408212 None:intergenic 45.0%
CGAGTCTCACATATAGTGGT+GGG - Chr5:4409839-4409858 None:intergenic 45.0%
CTACACGCTCAAACACCATA+CGG - Chr5:4408870-4408889 None:intergenic 45.0%
CTTACCCAACTCCACAAAAC+TGG + Chr5:4410206-4410225 MsG0580024406.01.T01:intron 45.0%
GATACTTCGCTCACTCGTTT+GGG + Chr5:4409255-4409274 MsG0580024406.01.T01:CDS 45.0%
GCAAGTAATATAACGCCGCT+TGG - Chr5:4408599-4408618 None:intergenic 45.0%
GGTGGGAAAACGATATTACG+TGG + Chr5:4410492-4410511 MsG0580024406.01.T01:intron 45.0%
GTCTTACCCAACTCCACAAA+TGG + Chr5:4410000-4410019 MsG0580024406.01.T01:intron 45.0%
TCAGGTTCGTGGTGTTTAGA+CGG - Chr5:4409315-4409334 None:intergenic 45.0%
TCGGAAGTCGTAGTAAGTTC+AGG - Chr5:4408745-4408764 None:intergenic 45.0%
TGATACTTCGCTCACTCGTT+TGG + Chr5:4409254-4409273 MsG0580024406.01.T01:CDS 45.0%
TTTGGATAGTAGCCCTTGGT+GGG - Chr5:4408189-4408208 None:intergenic 45.0%
! CACAAAACTGGCTTAAGAGG+TGG + Chr5:4410218-4410237 MsG0580024406.01.T01:intron 45.0%
! CACCTCTTAAGCCAGTTTTG+TGG - Chr5:4410220-4410239 None:intergenic 45.0%
! CTCCACAAAACTGGCTTAAG+AGG + Chr5:4410215-4410234 MsG0580024406.01.T01:intron 45.0%
! TATCCTGATCTGTGGTGTTG+TGG + Chr5:4409279-4409298 MsG0580024406.01.T01:CDS 45.0%
!! TTTCAGGTTCGCACTCAAGA+AGG - Chr5:4408453-4408472 None:intergenic 45.0%
!! AAAAAATTAAAACAAAATTA+AGG - Chr5:4410469-4410488 None:intergenic 5.0%
ACACGCTCGGAATACCATCA+TGG + Chr5:4408902-4408921 MsG0580024406.01.T01:CDS 50.0%
AGGGTTCAATTACCCCACCA+AGG + Chr5:4408173-4408192 MsG0580024406.01.T01:CDS 50.0%
CACCACGAACCTGAGAAACA+AGG + Chr5:4409321-4409340 MsG0580024406.01.T01:CDS 50.0%
CCAAACACATGTGGAGGAGA+AGG - Chr5:4409078-4409097 None:intergenic 50.0%
CCGAGCAGTGTTAAACCAGT+CGG - Chr5:4408764-4408783 None:intergenic 50.0%
CCTTCTCCTCCACATGTGTT+TGG + Chr5:4409075-4409094 MsG0580024406.01.T01:CDS 50.0%
CTTTGGATAGTAGCCCTTGG+TGG - Chr5:4408190-4408209 None:intergenic 50.0%
GGGTTCAATTACCCCACCAA+GGG + Chr5:4408174-4408193 MsG0580024406.01.T01:CDS 50.0%
GTGTGAATGGCGCACTTCAT+TGG + Chr5:4408980-4408999 MsG0580024406.01.T01:CDS 50.0%
GTTTGGGCTATCCTGATCTG+TGG + Chr5:4409271-4409290 MsG0580024406.01.T01:CDS 50.0%
TTGGATAGTAGCCCTTGGTG+GGG - Chr5:4408188-4408207 None:intergenic 50.0%
! ACCCTTGTTTCTCAGGTTCG+TGG - Chr5:4409326-4409345 None:intergenic 50.0%
!! CCGACTGGTTTAACACTGCT+CGG + Chr5:4408761-4408780 MsG0580024406.01.T01:CDS 50.0%
!! CGACTGGTTTAACACTGCTC+GGG + Chr5:4408762-4408781 MsG0580024406.01.T01:CDS 50.0%
AACACTGCTCGGGTACAAGC+TGG + Chr5:4408772-4408791 MsG0580024406.01.T01:CDS 55.0%
AGTGCGCCATTCACACACGT+TGG - Chr5:4408976-4408995 None:intergenic 55.0%
GTGCTCGAGATACACACGCT+CGG + Chr5:4408889-4408908 MsG0580024406.01.T01:CDS 55.0%
!! GCTCGGGTACAAGCTGGTTT+TGG + Chr5:4408778-4408797 MsG0580024406.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 4408154 4410556 4408154 ID=MsG0580024406.01;Name=MsG0580024406.01
Chr5 mRNA 4408154 4410556 4408154 ID=MsG0580024406.01.T01;Parent=MsG0580024406.01;Name=MsG0580024406.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|1|1|2|0|460
Chr5 exon 4408154 4409472 4408154 ID=MsG0580024406.01.T01:exon:28987;Parent=MsG0580024406.01.T01
Chr5 exon 4410493 4410556 4410493 ID=MsG0580024406.01.T01:exon:28988;Parent=MsG0580024406.01.T01
Chr5 CDS 4408154 4409472 4408154 ID=MsG0580024406.01.T01:cds;Parent=MsG0580024406.01.T01
Chr5 CDS 4410493 4410556 4410493 ID=MsG0580024406.01.T01:cds;Parent=MsG0580024406.01.T01
Gene Sequence

>MsG0580024406.01.T01

CTGGCCATGAAAAGAAGAAAGGGTTCAATTACCCCACCAAGGGCTACTATCCAAAGATGCAGCACTAAAGCAAAAAGTCATGAACTTTGCCCTTACTTTGATAATCTTCCATCTCACTTAACTACCAAAATTCTCCTAAAGCTTCCCATTAAGTCTCTTCTCATATGTAGATGTGTGTGCAAAATTTGGAATACACTTGTTTCAGAACCACAATTCGCTAAATTGCAAATTGAGCGAGCACCAGTCAGTTTCATGATTCGAAAATTAGACGATATAGGAGTGTCAAGAAACATATACCTTCTTGAGTGCGAACCTGAAAAGTTTGAGATTGGAAGCAACAATCTTGTGAAGCTTAAGCCTATATTCGAGCTTCCTCTTTGTGGTGACATATCATCTATGGACAAAAATGACGCCAAATCATATAAGGTGATCAAGAATAAATCCAAGCGGCGTTATATTACTTGCACTTCAAGTAGTGACAAGTTTGGCATTGTGAATTCTTGCAATGGCTTGCTTTGTTTATCTGAAACATCTACTGGAAGACCTTTAGCAATTTGCAACCCAGTAACGAGGGAATTCACAATACTTCCTGAACTTACTACGACTTCCGACTGGTTTAACACTGCTCGGGTACAAGCTGGTTTTGGTTTCCAACCCAAAACTGATGAATATAAGGTGATCATAATGTGGAACAAATATGTTAGACGAGATAACCGTATGGTGTTTGAGCGTGTAGTGCTCGAGATACACACGCTCGGAATACCATCATGGAGAAATGTTGAAGTGGATCCTCAAATTTCTTTTTTGAAGCTTTTGAATCCAACGTGTGTGAATGGCGCACTTCATTGGATTATATTTGAAGCTTGTCAACAAAAGTCAATATTGTGTTTCAATTTTGAAAGTGAGAGGTTGCAGTCATTTCCTTCTCCTCCACATGTGTTTGGAAATCATGATAATGGATTTCCCCATAACATGCCTATTAGATTGGGAGAATTGAAGGGATTTCTTTACATTTTTCATAGATCGTCTTTCGAGAATGTTACAATGTGGGTTATGAAAGAATATGGCATTGGAGAATCATGGACTAATGTTTACAACATTGATACTTCGCTCACTCGTTTGGGCTATCCTGATCTGTGGTGTTGTGGTTTTTGTTGGCCGTCTAAACACCACGAACCTGAGAAACAAGGGTTCAAAGTTTTTCGAATTCAAGGGACAACTTTAAGAGGAGTTGAAGTAATTGAACATATTCCAAGTCTAATTTCATTGAACGATGTAGTGAAAAGAAACAATGTTGATGTGTTGAACACCCACTCATGGTGGGAAAACGATATTACGTGGGGAGAAAATGAAGTTCTTTCCATATATCAACATATTGTTTGA
Protein sequence

>MsG0580024406.01.T01

LAMKRRKGSITPPRATIQRCSTKAKSHELCPYFDNLPSHLTTKILLKLPIKSLLICRCVCKIWNTLVSEPQFAKLQIERAPVSFMIRKLDDIGVSRNIYLLECEPEKFEIGSNNLVKLKPIFELPLCGDISSMDKNDAKSYKVIKNKSKRRYITCTSSSDKFGIVNSCNGLLCLSETSTGRPLAICNPVTREFTILPELTTTSDWFNTARVQAGFGFQPKTDEYKVIIMWNKYVRRDNRMVFERVVLEIHTLGIPSWRNVEVDPQISFLKLLNPTCVNGALHWIIFEACQQKSILCFNFESERLQSFPSPPHVFGNHDNGFPHNMPIRLGELKGFLYIFHRSSFENVTMWVMKEYGIGESWTNVYNIDTSLTRLGYPDLWCCGFCWPSKHHEPEKQGFKVFRIQGTTLRGVEVIEHIPSLISLNDVVKRNNVDVLNTHSWWENDITWGENEVLSIYQHIV*