AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047485.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047485.01.T01 MTR_4g128320 79.528 254 28 2 1 253 36 266 6.46e-145 408
MsG0880047485.01.T01 MTR_4g013185 53.558 267 110 4 5 260 147 410 4.14e-90 274
MsG0880047485.01.T01 MTR_7g078900 52.963 270 115 4 2 262 141 407 7.27e-90 273
MsG0880047485.01.T01 MTR_7g078040 51.943 283 110 6 2 261 137 416 5.98e-89 271
MsG0880047485.01.T01 MTR_7g079160 53.704 270 110 6 4 261 151 417 3.86e-88 271
MsG0880047485.01.T01 MTR_4g013180 53.903 269 112 5 3 261 121 387 7.76e-88 270
MsG0880047485.01.T01 MTR_4g013175 53.488 258 107 3 5 252 147 401 1.44e-86 265
MsG0880047485.01.T01 MTR_7g078840 53.184 267 104 5 2 248 138 403 8.26e-86 263
MsG0880047485.01.T01 MTR_7g077070 52.985 268 112 6 2 256 142 408 9.89e-84 258
MsG0880047485.01.T01 MTR_7g077970 51.613 279 114 6 2 261 129 405 6.29e-83 255
MsG0880047485.01.T01 MTR_5g058620 53.360 253 105 7 14 256 12 261 6.68e-82 248
MsG0880047485.01.T01 MTR_1g058870 53.360 253 105 7 14 256 12 261 6.68e-82 248
MsG0880047485.01.T01 MTR_1g088120 53.962 265 102 9 5 256 133 390 3.83e-80 248
MsG0880047485.01.T01 MTR_3g013470 52.988 251 101 5 19 261 120 361 3.73e-77 239
MsG0880047485.01.T01 MTR_7g077990 52.033 246 98 4 6 247 141 370 8.96e-77 239
MsG0880047485.01.T01 MTR_7g078860 52.510 259 105 6 8 255 136 387 1.70e-76 238
MsG0880047485.01.T01 MTR_0242s0060 49.035 259 107 5 7 245 134 387 1.33e-75 236
MsG0880047485.01.T01 MTR_0242s0040 49.035 259 107 5 7 245 134 387 1.33e-75 236
MsG0880047485.01.T01 MTR_7g077910 50.735 272 104 9 3 257 62 320 5.21e-72 225
MsG0880047485.01.T01 MTR_4g008790 46.816 267 114 5 5 263 185 431 2.66e-70 224
MsG0880047485.01.T01 MTR_7g056503 46.094 256 123 5 3 250 134 382 2.22e-69 220
MsG0880047485.01.T01 MTR_7g078960 48.507 268 110 6 2 256 14 266 2.77e-69 216
MsG0880047485.01.T01 MTR_1g029650 45.318 267 117 8 2 256 134 383 2.24e-65 210
MsG0880047485.01.T01 MTR_6g055210 43.866 269 129 6 3 249 135 403 1.50e-63 206
MsG0880047485.01.T01 MTR_2g043400 43.816 283 116 9 3 260 150 414 5.18e-62 201
MsG0880047485.01.T01 MTR_2g043410 46.512 258 110 7 3 244 150 395 5.28e-62 201
MsG0880047485.01.T01 MTR_1g015730 44.526 274 112 10 5 269 144 386 1.92e-60 197
MsG0880047485.01.T01 MTR_2g010920 42.966 263 131 5 4 247 144 406 2.45e-60 197
MsG0880047485.01.T01 MTR_7g062060 43.874 253 128 5 1 247 142 386 3.97e-60 196
MsG0880047485.01.T01 MTR_7g113500 45.238 252 124 8 7 247 115 363 4.22e-60 196
MsG0880047485.01.T01 MTR_3g437520 40.441 272 141 6 2 260 156 419 8.16e-60 197
MsG0880047485.01.T01 MTR_6g065510 45.276 254 111 10 7 246 73 312 2.70e-59 192
MsG0880047485.01.T01 MTR_7g056173 45.957 235 109 5 28 248 19 249 8.17e-59 191
MsG0880047485.01.T01 MTR_7g055830 40.727 275 130 7 2 247 68 338 1.63e-58 191
MsG0880047485.01.T01 MTR_2g010950 43.701 254 130 7 5 247 135 386 3.13e-58 191
MsG0880047485.01.T01 MTR_5g056020 42.222 270 132 7 3 248 134 403 4.10e-58 193
MsG0880047485.01.T01 MTR_7g055930 41.091 275 129 7 2 247 136 406 9.64e-58 191
MsG0880047485.01.T01 MTR_7g056290 42.471 259 120 7 2 244 153 398 1.01e-57 190
MsG0880047485.01.T01 MTR_3g080370 42.593 270 122 7 6 248 137 400 1.09e-57 191
MsG0880047485.01.T01 MTR_1g442850 42.857 252 126 5 3 246 118 359 1.83e-57 189
MsG0880047485.01.T01 MTR_7g055870 40.727 275 130 7 2 247 136 406 2.31e-57 189
MsG0880047485.01.T01 MTR_7g057270 42.802 257 134 6 3 248 142 396 5.31e-57 189
MsG0880047485.01.T01 MTR_4g034860 43.411 258 122 8 3 246 146 393 4.11e-56 186
MsG0880047485.01.T01 MTR_7g056003 41.636 269 116 8 7 251 141 392 5.01e-56 186
MsG0880047485.01.T01 MTR_7g056717 44.082 245 126 3 5 248 138 372 1.48e-55 184
MsG0880047485.01.T01 MTR_8g066440 41.270 252 132 6 3 245 139 383 1.51e-55 184
MsG0880047485.01.T01 MTR_7g056737 44.033 243 125 3 5 246 138 370 1.67e-55 184
MsG0880047485.01.T01 MTR_6g088385 42.188 256 124 6 5 245 52 298 1.80e-55 182
MsG0880047485.01.T01 MTR_7g091630 41.176 272 130 7 3 248 146 413 2.10e-55 185
MsG0880047485.01.T01 MTR_0649s0020 43.191 257 127 9 3 248 122 370 5.78e-55 182
MsG0880047485.01.T01 MTR_7g056390 41.107 253 122 6 7 244 154 394 1.41e-54 182
MsG0880047485.01.T01 MTR_0464s0020 40.698 258 127 7 4 244 158 406 1.83e-54 182
MsG0880047485.01.T01 MTR_1g015740 44.053 227 91 4 34 260 119 309 1.86e-54 179
MsG0880047485.01.T01 MTR_7g055953 44.444 225 106 7 36 254 90 301 5.65e-54 177
MsG0880047485.01.T01 MTR_6g016285 39.927 273 131 7 3 248 134 400 1.44e-53 180
MsG0880047485.01.T01 MTR_7g078940 42.912 261 88 8 3 256 174 380 2.57e-53 178
MsG0880047485.01.T01 MTR_3g072470 40.467 257 125 6 4 244 151 395 3.57e-53 178
MsG0880047485.01.T01 MTR_7g056710 41.736 242 128 4 7 246 135 365 6.75e-53 177
MsG0880047485.01.T01 MTR_4g030830 42.126 254 130 8 10 253 134 380 1.10e-52 177
MsG0880047485.01.T01 MTR_7g061050 42.570 249 128 6 3 247 131 368 2.55e-52 175
MsG0880047485.01.T01 MTR_7g060940 40.856 257 121 5 4 248 138 375 4.57e-52 175
MsG0880047485.01.T01 MTR_7g091640 45.771 201 102 4 5 199 149 348 6.81e-52 174
MsG0880047485.01.T01 MTR_3g464470 41.732 254 134 7 2 248 116 362 2.71e-51 172
MsG0880047485.01.T01 MTR_7g060960 43.902 246 118 7 5 248 122 349 4.22e-51 172
MsG0880047485.01.T01 MTR_7g070830 40.449 267 130 9 3 247 142 401 1.23e-50 172
MsG0880047485.01.T01 MTR_2g010900 43.723 231 118 7 5 225 101 329 2.25e-50 170
MsG0880047485.01.T01 MTR_7g061060 40.551 254 136 6 3 253 134 375 2.75e-50 171
MsG0880047485.01.T01 MTR_0707s0020 38.462 260 134 6 3 245 173 423 3.23e-50 171
MsG0880047485.01.T01 MTR_7g055977 42.292 253 126 9 7 250 125 366 4.96e-50 169
MsG0880047485.01.T01 MTR_6g086920 36.879 282 142 8 3 255 185 459 1.80e-49 171
MsG0880047485.01.T01 MTR_7g055987 43.842 203 97 4 1 203 135 320 5.18e-49 166
MsG0880047485.01.T01 MTR_7g056570 41.250 240 127 4 8 244 137 365 8.12e-49 167
MsG0880047485.01.T01 MTR_7g070880 40.385 260 134 8 3 244 142 398 1.93e-48 166
MsG0880047485.01.T01 MTR_2g006360 39.382 259 122 9 2 253 119 349 2.79e-47 162
MsG0880047485.01.T01 MTR_3g464500 41.224 245 131 6 11 248 147 385 2.92e-47 162
MsG0880047485.01.T01 MTR_4g033495 40.000 260 124 8 3 246 145 388 3.21e-47 163
MsG0880047485.01.T01 MTR_4g031020 38.735 253 140 6 6 248 163 410 4.25e-47 163
MsG0880047485.01.T01 MTR_5g069930 38.866 247 134 4 2 244 123 356 7.62e-47 161
MsG0880047485.01.T01 MTR_7g445890 37.544 285 150 8 2 268 105 379 1.94e-46 160
MsG0880047485.01.T01 MTR_4g019990 39.271 247 132 6 11 248 134 371 2.79e-46 160
MsG0880047485.01.T01 MTR_7g050520 36.992 246 139 4 4 247 139 370 3.31e-46 159
MsG0880047485.01.T01 MTR_7g078880 41.200 250 115 6 27 264 72 301 3.68e-46 159
MsG0880047485.01.T01 MTR_7g061090 36.782 261 144 6 3 255 151 398 3.87e-46 160
MsG0880047485.01.T01 MTR_5g069760 42.169 249 120 8 2 244 119 349 5.72e-46 158
MsG0880047485.01.T01 MTR_7g066100 38.372 258 130 7 7 247 129 374 5.98e-46 159
MsG0880047485.01.T01 MTR_7g028660 39.768 259 122 8 8 252 126 364 8.09e-46 158
MsG0880047485.01.T01 MTR_7g050480 37.805 246 137 4 4 247 139 370 1.09e-45 158
MsG0880047485.01.T01 MTR_5g043160 37.548 261 146 8 4 251 187 443 1.42e-45 159
MsG0880047485.01.T01 MTR_2g047878 40.964 249 113 6 2 248 130 346 1.68e-45 157
MsG0880047485.01.T01 MTR_6g081280 43.379 219 107 5 34 247 16 222 2.10e-45 153
MsG0880047485.01.T01 MTR_7g062100 43.496 246 120 7 9 247 146 379 2.14e-45 157
MsG0880047485.01.T01 MTR_4g024890 42.276 246 126 9 10 248 131 367 2.98e-45 157
MsG0880047485.01.T01 MTR_2g047892 36.948 249 138 7 3 244 138 374 3.52e-45 157
MsG0880047485.01.T01 MTR_0097s0030 39.200 250 133 8 2 248 127 360 4.79e-45 156
MsG0880047485.01.T01 MTR_2g047240 39.200 250 133 8 2 248 127 360 4.79e-45 156
MsG0880047485.01.T01 MTR_6g092560 36.090 266 141 8 1 248 124 378 5.41e-45 157
MsG0880047485.01.T01 MTR_7g034310 44.076 211 102 4 36 246 17 211 5.76e-45 152
MsG0880047485.01.T01 MTR_2g047200 38.672 256 133 9 3 249 138 378 7.07e-45 156
MsG0880047485.01.T01 MTR_5g068040 38.996 259 138 8 3 250 116 365 8.55e-45 155
MsG0880047485.01.T01 MTR_4g129190 38.783 263 133 8 2 245 117 370 1.22e-44 155
MsG0880047485.01.T01 MTR_0128s0020 39.600 250 129 7 3 245 139 373 1.36e-44 155
MsG0880047485.01.T01 MTR_7g052670 36.496 274 146 7 3 254 144 411 1.80e-44 156
MsG0880047485.01.T01 MTR_7g066030 38.168 262 132 8 7 251 141 389 2.65e-44 155
MsG0880047485.01.T01 MTR_6g017305 36.154 260 149 5 2 248 9 264 3.08e-44 152
MsG0880047485.01.T01 MTR_4g030980 36.328 256 148 6 3 248 160 410 3.08e-44 155
MsG0880047485.01.T01 MTR_1g071010 38.760 258 129 11 2 247 128 368 4.16e-44 154
MsG0880047485.01.T01 MTR_7g056820 37.190 242 142 4 3 243 122 354 4.21e-44 154
MsG0880047485.01.T01 MTR_7g009265 37.692 260 147 6 2 248 49 306 6.88e-44 152
MsG0880047485.01.T01 MTR_2g047895 38.431 255 127 8 4 248 59 293 1.24e-43 152
MsG0880047485.01.T01 MTR_0128s0010 37.945 253 138 7 1 245 136 377 3.85e-43 152
MsG0880047485.01.T01 MTR_7g066840 38.745 271 136 10 5 260 139 394 5.43e-43 151
MsG0880047485.01.T01 MTR_2g010935 40.566 212 98 4 41 247 43 231 1.17e-42 146
MsG0880047485.01.T01 MTR_6g017295 36.900 271 141 7 2 244 59 327 1.18e-42 153
MsG0880047485.01.T01 MTR_0128s0070 37.698 252 135 7 3 247 142 378 1.30e-42 150
MsG0880047485.01.T01 MTR_4g037465 36.364 242 145 5 5 243 137 372 2.55e-42 149
MsG0880047485.01.T01 MTR_5g096710 36.111 252 145 6 1 247 140 380 3.64e-42 149
MsG0880047485.01.T01 MTR_2g461450 37.500 248 135 5 9 248 121 356 5.15e-42 148
MsG0880047485.01.T01 MTR_6g017280 36.111 252 146 6 2 244 121 366 8.45e-42 148
MsG0880047485.01.T01 MTR_7g056760 36.398 261 147 7 2 252 140 391 1.28e-41 148
MsG0880047485.01.T01 MTR_7g066850 37.591 274 144 8 5 260 137 401 1.58e-41 149
MsG0880047485.01.T01 MTR_7g061010 37.549 253 137 6 4 252 138 373 2.20e-41 147
MsG0880047485.01.T01 MTR_7g066080 36.531 271 133 9 5 244 134 396 2.31e-41 148
MsG0880047485.01.T01 MTR_2g017720 38.494 239 131 7 19 253 61 287 2.33e-41 148
MsG0880047485.01.T01 MTR_4g011660 36.466 266 134 6 7 247 144 399 3.02e-41 147
MsG0880047485.01.T01 MTR_7g066060 38.672 256 135 7 3 244 141 388 3.79e-41 149
MsG0880047485.01.T01 MTR_4g129160 40.343 233 117 8 3 223 138 360 4.12e-41 145
MsG0880047485.01.T01 MTR_0128s0110 40.217 184 101 4 64 243 4 182 3.31e-40 139
MsG0880047485.01.T01 MTR_7g052150 37.647 255 140 7 4 251 141 383 4.49e-40 144
MsG0880047485.01.T01 MTR_7g056260 47.179 195 85 7 7 195 135 317 1.40e-39 140
MsG0880047485.01.T01 MTR_4g030090 38.521 257 132 10 10 250 138 384 3.10e-39 141
MsG0880047485.01.T01 MTR_7g091610 42.697 178 97 2 70 242 46 223 1.02e-38 136
MsG0880047485.01.T01 MTR_7g056200 36.287 237 137 7 22 248 132 364 2.09e-38 139
MsG0880047485.01.T01 MTR_7g035295 34.733 262 113 7 3 244 135 358 2.66e-38 139
MsG0880047485.01.T01 MTR_7g056797 36.905 252 136 7 7 247 145 384 4.38e-38 138
MsG0880047485.01.T01 MTR_4g020000 40.948 232 116 8 34 254 111 332 7.41e-38 137
MsG0880047485.01.T01 MTR_7g066000 34.483 261 137 9 3 244 135 380 4.35e-37 136
MsG0880047485.01.T01 MTR_2g027820 41.916 167 92 3 88 251 119 283 6.61e-37 133
MsG0880047485.01.T01 MTR_7g022600 34.109 258 155 7 4 247 147 403 9.20e-37 135
MsG0880047485.01.T01 MTR_7g061940 41.379 203 100 6 38 236 79 266 3.02e-36 130
MsG0880047485.01.T01 MTR_8g030630 41.711 187 81 4 60 243 279 440 4.75e-36 134
MsG0880047485.01.T01 MTR_8g030630 44.000 175 88 5 78 247 72 241 2.85e-34 129
MsG0880047485.01.T01 MTR_4g030110 37.008 254 121 8 10 250 154 381 5.39e-36 132
MsG0880047485.01.T01 MTR_1g112010 34.400 250 133 6 1 248 87 307 1.42e-35 130
MsG0880047485.01.T01 MTR_7g066010 35.385 260 106 9 3 245 137 351 2.57e-34 128
MsG0880047485.01.T01 MTR_2g437110 34.749 259 130 9 3 248 143 375 5.74e-34 129
MsG0880047485.01.T01 MTR_2g060555 34.363 259 121 10 6 248 45 270 8.10e-34 124
MsG0880047485.01.T01 MTR_5g069950 39.196 199 90 6 6 201 33 203 1.51e-33 122
MsG0880047485.01.T01 MTR_0267s0050 33.929 224 128 5 36 251 159 370 1.31e-31 121
MsG0880047485.01.T01 MTR_4g030760 34.783 253 129 10 10 253 192 417 2.31e-31 121
MsG0880047485.01.T01 MTR_3g013950 34.375 224 127 5 36 251 161 372 3.58e-31 120
MsG0880047485.01.T01 MTR_7g445750 37.438 203 86 6 7 184 145 331 4.71e-31 118
MsG0880047485.01.T01 MTR_6g042600 45.455 132 64 2 119 244 173 302 1.88e-30 118
MsG0880047485.01.T01 MTR_7g056170 36.564 227 102 4 33 248 247 442 2.71e-30 118
MsG0880047485.01.T01 MTR_4g006350 32.444 225 137 5 35 248 637 857 2.11e-29 117
MsG0880047485.01.T01 MTR_4g030790 36.123 227 126 8 10 232 105 316 3.35e-29 113
MsG0880047485.01.T01 MTR_1g047490 38.235 204 85 6 4 196 134 307 3.53e-29 113
MsG0880047485.01.T01 MTR_7g058630 42.000 150 79 3 101 247 17 161 7.54e-29 108
MsG0880047485.01.T01 MTR_7g022670 36.634 202 120 5 50 247 135 332 8.29e-29 112
MsG0880047485.01.T01 MTR_8g101940 35.341 249 131 10 10 248 122 350 9.03e-29 113
MsG0880047485.01.T01 MTR_7g070937 47.407 135 64 5 30 157 6 140 2.27e-28 107
MsG0880047485.01.T01 MTR_7g070440 33.333 261 141 9 5 251 116 357 1.82e-27 109
MsG0880047485.01.T01 MTR_7g056023 41.477 176 87 8 8 177 113 278 2.17e-26 104
MsG0880047485.01.T01 MTR_7g006360 36.646 161 96 4 89 244 98 257 6.89e-26 103
MsG0880047485.01.T01 MTR_7g070900 38.857 175 70 5 32 199 233 377 5.60e-25 103
MsG0880047485.01.T01 MTR_5g011350 36.207 174 89 5 4 174 92 246 1.97e-23 96.3
MsG0880047485.01.T01 MTR_7g066040 39.490 157 74 6 3 141 44 197 3.06e-23 95.9
MsG0880047485.01.T01 MTR_7g062070 44.068 118 60 3 132 244 75 191 1.25e-22 92.8
MsG0880047485.01.T01 MTR_3g055000 40.000 120 59 2 129 247 1 108 4.32e-22 89.4
MsG0880047485.01.T01 MTR_7g037670 31.020 245 111 9 5 245 121 311 5.35e-22 94.0
MsG0880047485.01.T01 MTR_7g445580 44.860 107 56 2 138 244 42 145 1.10e-21 89.0
MsG0880047485.01.T01 MTR_7g030040 32.927 246 93 9 4 248 145 319 3.31e-21 92.0
MsG0880047485.01.T01 MTR_7g056793 28.505 214 107 5 34 247 46 213 4.19e-19 84.3
MsG0880047485.01.T01 MTR_6g017270 44.340 106 48 2 152 246 219 324 6.87e-19 85.5
MsG0880047485.01.T01 MTR_2g021150 30.242 248 144 9 10 252 132 355 1.30e-18 85.1
MsG0880047485.01.T01 MTR_1g094210 27.660 282 153 12 2 276 164 401 1.70e-18 85.1
MsG0880047485.01.T01 MTR_1g016960 51.163 86 37 2 170 250 152 237 1.91e-18 82.8
MsG0880047485.01.T01 MTR_1g094210 29.897 194 109 6 2 193 164 332 2.88e-18 84.3
MsG0880047485.01.T01 MTR_6g048150 50.562 89 31 3 175 258 13 93 7.60e-18 78.2
MsG0880047485.01.T01 MTR_1g097560 29.339 242 134 10 2 240 141 348 1.03e-17 82.4
MsG0880047485.01.T01 MTR_7g089830 36.806 144 66 4 91 226 4 130 2.90e-17 77.0
MsG0880047485.01.T01 MTR_4g031770 30.000 230 125 10 10 224 116 324 3.87e-17 80.9
MsG0880047485.01.T01 MTR_2g055970 30.453 243 141 12 3 240 316 535 1.10e-16 80.1
MsG0880047485.01.T01 MTR_3g055070 38.053 113 56 3 129 240 1 100 1.85e-16 75.5
MsG0880047485.01.T01 MTR_1g050542 30.570 193 116 5 8 198 164 340 2.45e-16 78.6
MsG0880047485.01.T01 MTR_2g046860 30.288 208 125 8 38 243 57 246 5.12e-16 77.0
MsG0880047485.01.T01 MTR_7g021580 50.746 67 33 0 180 246 218 284 5.34e-16 77.0
MsG0880047485.01.T01 MTR_4g053470 29.858 211 98 8 23 224 128 297 1.18e-15 75.9
MsG0880047485.01.T01 MTR_4g024910 40.164 122 67 2 130 248 130 248 1.42e-15 75.9
MsG0880047485.01.T01 MTR_2g046920 28.807 243 148 10 4 243 133 353 1.52e-15 76.3
MsG0880047485.01.T01 MTR_8g098640 43.421 76 39 2 171 243 3 77 4.95e-15 69.3
MsG0880047485.01.T01 MTR_1g046600 53.623 69 27 1 173 236 238 306 1.34e-14 72.8
MsG0880047485.01.T01 MTR_1g046600 47.436 78 32 3 2 74 169 242 1.09e-12 67.4
MsG0880047485.01.T01 MTR_2g047832 30.317 221 124 9 38 243 173 378 1.49e-14 73.6
MsG0880047485.01.T01 MTR_4g061340 30.620 258 121 15 2 239 133 352 2.35e-14 72.8
MsG0880047485.01.T01 MTR_1g056280 32.749 171 91 8 60 224 28 180 2.50e-14 70.9
MsG0880047485.01.T01 MTR_7g058660 36.458 96 53 1 160 247 101 196 3.43e-14 70.5
MsG0880047485.01.T01 MTR_1g097330 30.636 173 95 7 38 201 154 310 4.59e-14 72.0
MsG0880047485.01.T01 MTR_2g046900 30.144 209 127 8 38 243 173 365 6.20e-14 71.6
MsG0880047485.01.T01 MTR_1g097510 32.386 176 96 7 70 242 95 250 1.07e-13 70.1
MsG0880047485.01.T01 MTR_3g024130 27.907 258 144 13 10 253 78 307 1.29e-13 70.1
MsG0880047485.01.T01 MTR_8g030660 36.842 133 48 4 2 102 139 267 1.64e-13 69.3
MsG0880047485.01.T01 MTR_1g054575 28.436 211 134 4 2 211 155 349 3.05e-13 70.1
MsG0880047485.01.T01 MTR_4g107780 27.386 241 144 8 6 240 144 359 3.15e-13 69.7
MsG0880047485.01.T01 MTR_4g107820 27.386 241 144 8 6 240 144 359 3.19e-13 69.3
MsG0880047485.01.T01 MTR_4g107780 27.386 241 144 8 6 240 144 359 3.19e-13 69.3
MsG0880047485.01.T01 MTR_4g107820 27.386 241 144 8 6 240 144 359 3.30e-13 69.7
MsG0880047485.01.T01 MTR_0760s0010 28.571 196 102 9 10 199 165 328 4.96e-13 68.9
MsG0880047485.01.T01 MTR_7g060930 47.059 68 36 0 114 181 11 78 8.10e-13 63.2
MsG0880047485.01.T01 MTR_1004s0010 28.061 196 103 9 10 199 135 298 1.36e-12 67.4
MsG0880047485.01.T01 MTR_2g078870 26.971 241 144 10 10 247 78 289 1.87e-12 66.6
MsG0880047485.01.T01 MTR_3g010970 33.696 184 88 9 10 193 171 320 2.31e-12 67.0
MsG0880047485.01.T01 MTR_5g022420 27.468 233 134 10 9 236 139 341 2.49e-12 66.6
MsG0880047485.01.T01 MTR_1g115160 28.346 254 131 11 21 261 143 358 3.65e-12 66.2
MsG0880047485.01.T01 MTR_4g030880 31.282 195 87 8 61 250 48 200 4.32e-12 66.2
MsG0880047485.01.T01 MTR_2g021155 26.860 242 137 11 10 239 147 360 4.59e-12 66.6
MsG0880047485.01.T01 MTR_8g467140 30.500 200 118 9 3 197 137 320 4.82e-12 65.9
MsG0880047485.01.T01 MTR_0354s0030 39.744 78 40 1 178 248 1 78 5.55e-12 61.2
MsG0880047485.01.T01 MTR_6g007135 30.151 199 120 9 2 195 138 322 5.77e-12 65.9
MsG0880047485.01.T01 MTR_1g055375 30.151 199 112 9 32 224 146 323 6.78e-12 65.5
MsG0880047485.01.T01 MTR_2g046830 29.843 191 107 6 38 223 169 337 8.11e-12 65.5
MsG0880047485.01.T01 MTR_3g007360 28.629 248 132 11 8 240 165 382 1.14e-11 65.1
MsG0880047485.01.T01 MTR_3g007410 28.916 249 130 11 8 240 165 382 1.82e-11 64.3
MsG0880047485.01.T01 MTR_3g014540 26.506 249 142 10 11 246 143 363 2.21e-11 63.9
MsG0880047485.01.T01 MTR_3g009240 27.966 236 124 13 2 223 139 342 2.66e-11 63.9
MsG0880047485.01.T01 MTR_3g009300 28.163 245 131 14 8 239 119 331 3.05e-11 63.5
MsG0880047485.01.T01 MTR_7g407070 27.778 270 135 14 8 255 162 393 6.41e-11 62.8
MsG0880047485.01.T01 MTR_6g053240 26.877 253 149 12 10 250 152 380 6.94e-11 62.4
MsG0880047485.01.T01 MTR_3g010920 29.730 185 96 7 10 193 159 310 9.81e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 59 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAATACTGGTTCCGTTTA+TGG 0.111982 8:-86996697 MsG0880047485.01.T01:CDS
ATTGCTAGTTCTATAATTAT+TGG 0.157462 8:+86995947 None:intergenic
AGACAAACTTCTCCAAAATT+TGG 0.198602 8:-86996662 MsG0880047485.01.T01:CDS
GTGCGAAAATAGCCAAATTT+TGG 0.228505 8:+86996650 None:intergenic
ATGGAGCAATTCTCTATAAT+TGG 0.231393 8:-86996019 MsG0880047485.01.T01:CDS
TGTTATTGTTTCCCTTGATC+TGG 0.256369 8:-86996336 MsG0880047485.01.T01:CDS
CTATATCCCTTGACAAGAAT+TGG 0.308975 8:+86994550 None:intergenic
GCTCCAATTGTTGGCGTGCT+AGG 0.320900 8:-86996254 MsG0880047485.01.T01:CDS
ATATGGCAGATGAAGAAATA+TGG 0.333908 8:-86996185 MsG0880047485.01.T01:CDS
CTTCGCAGTTGTCAAGAAAA+TGG 0.344773 8:-86996038 MsG0880047485.01.T01:CDS
CTCCAATTGTTGGCGTGCTA+GGG 0.349278 8:-86996253 MsG0880047485.01.T01:CDS
CATCTGCCATATGACAAAAT+AGG 0.364418 8:+86996196 None:intergenic
CCACCTGCAGCTCCAATTGT+TGG 0.368443 8:-86996263 MsG0880047485.01.T01:CDS
GTTATTGTTTCCCTTGATCT+GGG 0.379686 8:-86996335 MsG0880047485.01.T01:CDS
CGATGGATTATCAAGAATAC+TGG 0.393226 8:-86996709 MsG0880047485.01.T01:CDS
AATATGGGGCCGAAGAATCT+TGG 0.403564 8:-86996169 MsG0880047485.01.T01:CDS
GGTACCTACACATTCAAGTT+TGG 0.408021 8:-86996614 MsG0880047485.01.T01:CDS
TCCAATTGTTGGCGTGCTAG+GGG 0.418317 8:-86996252 MsG0880047485.01.T01:CDS
CAATTCATCAGGCACTTATA+AGG 0.419776 8:-86996585 MsG0880047485.01.T01:CDS
GTCAGTACAATCTGCCTTGT+GGG 0.432125 8:-86996298 MsG0880047485.01.T01:CDS
TTTGGTTGTGACAATTCATC+AGG 0.438570 8:-86996596 MsG0880047485.01.T01:CDS
TGAGTGGTGATGATGTTGTT+TGG 0.442299 8:-86996511 MsG0880047485.01.T01:CDS
GCCATTCACGACGGCATCAA+TGG 0.450243 8:-86996392 MsG0880047485.01.T01:CDS
ACCATTGATGCCGTCGTGAA+TGG 0.452425 8:+86996391 None:intergenic
TCGGTTGATTTAGTTTCTCT+CGG 0.452505 8:+86996552 None:intergenic
TGGAGGCTACGTTCCATAAA+CGG 0.459897 8:+86996684 None:intergenic
TATGGCAGATGAAGAAATAT+GGG 0.477118 8:-86996184 MsG0880047485.01.T01:CDS
GAATTGAGTCCAAGATTCTT+CGG 0.477491 8:+86996160 None:intergenic
ATTCCTCTTTGCTCCGCCAA+TGG 0.477950 8:-86996464 MsG0880047485.01.T01:CDS
CATAGTTTACTTGAAGATGT+TGG 0.478921 8:+86996123 None:intergenic
ACGTCTCAGTCCCCAGATCA+AGG 0.504059 8:+86996324 None:intergenic
ATCAGGCACTTATAAGGTGC+TGG 0.506230 8:-86996579 MsG0880047485.01.T01:CDS
GCGGAGCAAAGAGGAATAGC+GGG 0.514550 8:+86996470 None:intergenic
ACGCCAACAATTGGAGCTGC+AGG 0.525520 8:+86996260 None:intergenic
TTTCGCACTGTCAGGTGCCG+TGG 0.542551 8:-86996635 MsG0880047485.01.T01:CDS
CCTCTTTGCTCCGCCAATGG+TGG 0.549010 8:-86996461 MsG0880047485.01.T01:CDS
ACCGGCAACAATTGAAAACT+AGG 0.550019 8:+86996092 None:intergenic
TTATTGTTTCCCTTGATCTG+GGG 0.557597 8:-86996334 MsG0880047485.01.T01:CDS
TAAGAAGCCAATTCTTGTCA+AGG 0.560116 8:-86994557 MsG0880047485.01.T01:CDS
CCAATTGTTGGCGTGCTAGG+GGG 0.571332 8:-86996251 MsG0880047485.01.T01:CDS
GGTGATGATGTTGTTTGGAG+AGG 0.576092 8:-86996506 MsG0880047485.01.T01:CDS
AGTCAGTACAATCTGCCTTG+TGG 0.584817 8:-86996299 MsG0880047485.01.T01:CDS
AAGAAGCCAATTCTTGTCAA+GGG 0.585019 8:-86994556 MsG0880047485.01.T01:CDS
CGTCTCAGTCCCCAGATCAA+GGG 0.594950 8:+86996325 None:intergenic
ATTCGTAGAACATCCACCAT+TGG 0.597722 8:+86996448 None:intergenic
CGTAGAACATCCACCATTGG+CGG 0.599471 8:+86996451 None:intergenic
ACGAATGGTGTATATTGTAG+TGG 0.605685 8:-86996431 MsG0880047485.01.T01:CDS
CCAACAATTGGAGCTGCAGG+TGG 0.618329 8:+86996263 None:intergenic
GGCAATTCATCGAACCCACA+AGG 0.620254 8:+86996284 None:intergenic
CCACCATTGGCGGAGCAAAG+AGG 0.620817 8:+86996461 None:intergenic
GGCGGAGCAAAGAGGAATAG+CGG 0.628490 8:+86996469 None:intergenic
ACAACCAAACTTGAATGTGT+AGG 0.640513 8:+86996610 None:intergenic
AATTGGTTTGCCATTCACGA+CGG 0.648625 8:-86996401 MsG0880047485.01.T01:CDS
AATGGTGGATGTTCTACGAA+TGG 0.657460 8:-86996446 MsG0880047485.01.T01:CDS
ACTTGAATGTGTAGGTACCA+CGG 0.685881 8:+86996618 None:intergenic
GACAAAATAGGTGTGCCTGT+AGG 0.700256 8:+86996208 None:intergenic
ATGGCAGATGAAGAAATATG+GGG 0.712010 8:-86996183 MsG0880047485.01.T01:CDS
CGGAGCAAAGAGGAATAGCG+GGG 0.716393 8:+86996471 None:intergenic
AGCAGTGTGAGAATTCTGAG+TGG 0.817874 8:-86996527 MsG0880047485.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAATAATTGAATGAA+AGG - Chr8:86995683-86995702 MsG0880047485.01.T01:intron 10.0%
!! ATATGTTGTTATAATTATAG+TGG - Chr8:86995426-86995445 MsG0880047485.01.T01:intron 15.0%
!! GAAAAGAAATAAAGTTAGAT+TGG + Chr8:86995788-86995807 None:intergenic 20.0%
!! TCAACAAAAGTTAATGTATT+TGG - Chr8:86995848-86995867 MsG0880047485.01.T01:intron 20.0%
!!! ATATTTTAATGACTATCTGT+TGG - Chr8:86995495-86995514 MsG0880047485.01.T01:intron 20.0%
!!! ATTAGGTCTTGTTTTTATTT+TGG - Chr8:86996573-86996592 MsG0880047485.01.T01:CDS 20.0%
!!! ATTGCTAGTTCTATAATTAT+TGG + Chr8:86995300-86995319 None:intergenic 20.0%
!!! TAAAGAAAGACTTTTTTAAG+AGG + Chr8:86996435-86996454 None:intergenic 20.0%
! AAAACAAATTCATCAAAACC+AGG + Chr8:86995548-86995567 None:intergenic 25.0%
! ACAAGACCTAATTTATTTCA+CGG + Chr8:86996565-86996584 None:intergenic 25.0%
! GTCAACAAAAGTTAATGTAT+TGG + Chr8:86995866-86995847 None:intergenic 25.0%
! GTTATTCTAATGAATACACA+TGG + Chr8:86996496-86996515 None:intergenic 25.0%
!! AATGGTTTTTGAATCCTATT+GGG - Chr8:86996134-86996153 MsG0880047485.01.T01:CDS 25.0%
!! ACTAATTTTTGCTTACAGTT+TGG + Chr8:86995829-86995848 None:intergenic 25.0%
!! ATGTGCTGATGAATATTATT+AGG - Chr8:86996270-86996289 MsG0880047485.01.T01:CDS 25.0%
!! CTAATTTTTGCTTACAGTTT+GGG + Chr8:86995828-86995847 None:intergenic 25.0%
!! TGTGCTGATGAATATTATTA+GGG - Chr8:86996271-86996290 MsG0880047485.01.T01:CDS 25.0%
!!! GATGTTGGTAACTAATTTTA+AGG + Chr8:86995109-86995128 None:intergenic 25.0%
!!! TTTGTTTTTCTTATTCCTAC+AGG - Chr8:86995021-86995040 MsG0880047485.01.T01:intron 25.0%
!!! TTTTTTTCTTATGACTGCTT+AGG - Chr8:86995464-86995483 MsG0880047485.01.T01:intron 25.0%
AAAACAAAAATACACCCGTT+TGG + Chr8:86996356-86996375 None:intergenic 30.0%
AAACAAGTAAACCATGAAAG+AGG + Chr8:86995389-86995408 None:intergenic 30.0%
AAATCCTAATATGCTATGCT+TGG - Chr8:86996627-86996646 MsG0880047485.01.T01:CDS 30.0%
AACGAAACAATGAAAACTCA+AGG + Chr8:86995630-86995649 None:intergenic 30.0%
AATGATCATCATGTTATGCT+TGG + Chr8:86996518-86996537 None:intergenic 30.0%
AATTGAATGAAAGGTTGAAG+TGG - Chr8:86995692-86995711 MsG0880047485.01.T01:intron 30.0%
ACGAAACAATGAAAACTCAA+GGG + Chr8:86995629-86995648 None:intergenic 30.0%
ACGTTATAATTTGAGCTACA+AGG - Chr8:86996090-86996109 MsG0880047485.01.T01:CDS 30.0%
AGACAAACTTCTCCAAAATT+TGG - Chr8:86994582-86994601 MsG0880047485.01.T01:intron 30.0%
ATATGGCAGATGAAGAAATA+TGG - Chr8:86995059-86995078 MsG0880047485.01.T01:intron 30.0%
ATGGAGCAATTCTCTATAAT+TGG - Chr8:86995225-86995244 MsG0880047485.01.T01:intron 30.0%
ATTGAATGAAAGGTTGAAGT+GGG - Chr8:86995693-86995712 MsG0880047485.01.T01:intron 30.0%
CATAGTTTACTTGAAGATGT+TGG + Chr8:86995124-86995143 None:intergenic 30.0%
CGTTATAATTTGAGCTACAA+GGG - Chr8:86996091-86996110 MsG0880047485.01.T01:CDS 30.0%
CTGATGAATATTATTAGGGT+GGG - Chr8:86996275-86996294 MsG0880047485.01.T01:CDS 30.0%
CTTATTATGTTGTGCGTATT+TGG + Chr8:86996034-86996053 None:intergenic 30.0%
GCACAACATAATAAGATAGA+GGG - Chr8:86996039-86996058 MsG0880047485.01.T01:CDS 30.0%
TATGGCAGATGAAGAAATAT+GGG - Chr8:86995060-86995079 MsG0880047485.01.T01:intron 30.0%
TCAGAACCGTGAAATAAATT+AGG - Chr8:86996556-86996575 MsG0880047485.01.T01:CDS 30.0%
TGTTTAAGCTTCAGTATAAG+TGG - Chr8:86996313-86996332 MsG0880047485.01.T01:CDS 30.0%
TGTTTCGTTTGTCATCTAAA+TGG - Chr8:86995641-86995660 MsG0880047485.01.T01:intron 30.0%
TTGAACTGAACATTTGTTTG+TGG - Chr8:86995949-86995968 MsG0880047485.01.T01:CDS 30.0%
TTTATTTGGGTATTCCAAAC+GGG - Chr8:86996339-86996358 MsG0880047485.01.T01:CDS 30.0%
! ACCAATTTTTGCTTACAGTT+TGG - Chr8:86995906-86995925 MsG0880047485.01.T01:intron 30.0%
! AGTATAAGTGGTGCTTTATT+TGG - Chr8:86996325-86996344 MsG0880047485.01.T01:CDS 30.0%
! ATTGTAGTGGCACTTTTAAT+TGG - Chr8:86994826-86994845 MsG0880047485.01.T01:intron 30.0%
! CAATGGTTTTTGAATCCTAT+TGG - Chr8:86996133-86996152 MsG0880047485.01.T01:CDS 30.0%
! CCAATTTTTGCTTACAGTTT+GGG - Chr8:86995907-86995926 MsG0880047485.01.T01:intron 30.0%
! CTTTATTTGGGTATTCCAAA+CGG - Chr8:86996338-86996357 MsG0880047485.01.T01:CDS 30.0%
! TTTTGTACTTCGTATCACAA+TGG - Chr8:86996116-86996135 MsG0880047485.01.T01:CDS 30.0%
!! AAATTTTGGAGAAGTTTGTC+TGG + Chr8:86994583-86994602 None:intergenic 30.0%
!! GTATAAGTGGTGCTTTATTT+GGG - Chr8:86996326-86996345 MsG0880047485.01.T01:CDS 30.0%
!!! ATTTTGGAATGAGTGTCAAT+TGG - Chr8:86996005-86996024 MsG0880047485.01.T01:CDS 30.0%
!!! GTATCTCCTTTGTTACTTTT+GGG - Chr8:86995975-86995994 MsG0880047485.01.T01:CDS 30.0%
!!! TGTATCTCCTTTGTTACTTT+TGG - Chr8:86995974-86995993 MsG0880047485.01.T01:CDS 30.0%
AAGAAGCCAATTCTTGTCAA+GGG - Chr8:86996688-86996707 MsG0880047485.01.T01:CDS 35.0%
AATTGTCTGCAGTAATGCAT+AGG - Chr8:86996247-86996266 MsG0880047485.01.T01:CDS 35.0%
ACAACCAAACTTGAATGTGT+AGG + Chr8:86994637-86994656 None:intergenic 35.0%
ACAATTAAAAAGCTCACCTG+AGG + Chr8:86996233-86996252 None:intergenic 35.0%
ACGAATGGTGTATATTGTAG+TGG - Chr8:86994813-86994832 MsG0880047485.01.T01:intron 35.0%
ACGCATCAATAGACTTAGAT+GGG - Chr8:86995727-86995746 MsG0880047485.01.T01:intron 35.0%
ACTTCCAAGCATAGCATATT+AGG + Chr8:86996634-86996653 None:intergenic 35.0%
ATACTGAAGCTTAAACATGC+AGG + Chr8:86996310-86996329 None:intergenic 35.0%
ATCAATAGACTTAGATGGGT+AGG - Chr8:86995731-86995750 MsG0880047485.01.T01:intron 35.0%
ATGGCAGATGAAGAAATATG+GGG - Chr8:86995061-86995080 MsG0880047485.01.T01:intron 35.0%
CAATTCATCAGGCACTTATA+AGG - Chr8:86994659-86994678 MsG0880047485.01.T01:intron 35.0%
CATCTGCCATATGACAAAAT+AGG + Chr8:86995051-86995070 None:intergenic 35.0%
CCCAAACTGTAAGCAAAAAT+TGG + Chr8:86995844-86995825 None:intergenic 35.0%
CGCACAACATAATAAGATAG+AGG - Chr8:86996038-86996057 MsG0880047485.01.T01:CDS 35.0%
CTATATCCCTTGACAAGAAT+TGG + Chr8:86996697-86996716 None:intergenic 35.0%
GAAAGTAAGTTCCTCTTTCA+TGG - Chr8:86995375-86995394 MsG0880047485.01.T01:intron 35.0%
GAACTAGCAATCAAGTAATC+TGG - Chr8:86995309-86995328 MsG0880047485.01.T01:intron 35.0%
GAATTGAGTCCAAGATTCTT+CGG + Chr8:86995087-86995106 None:intergenic 35.0%
GCTGATGAATATTATTAGGG+TGG - Chr8:86996274-86996293 MsG0880047485.01.T01:CDS 35.0%
GTTATTGTTTCCCTTGATCT+GGG - Chr8:86994909-86994928 MsG0880047485.01.T01:intron 35.0%
TAAGAAGCCAATTCTTGTCA+AGG - Chr8:86996687-86996706 MsG0880047485.01.T01:CDS 35.0%
TAATTGATTGATGAAGCCTC+AGG - Chr8:86996214-86996233 MsG0880047485.01.T01:CDS 35.0%
TCATCACCCAAAAGTAACAA+AGG + Chr8:86995984-86996003 None:intergenic 35.0%
TGTTATTGTTTCCCTTGATC+TGG - Chr8:86994908-86994927 MsG0880047485.01.T01:intron 35.0%
TTAAAGACTTGACAATCTCC+TGG - Chr8:86995527-86995546 MsG0880047485.01.T01:intron 35.0%
TTATTGTTTCCCTTGATCTG+GGG - Chr8:86994910-86994929 MsG0880047485.01.T01:intron 35.0%
TTTGGTTGTGACAATTCATC+AGG - Chr8:86994648-86994667 MsG0880047485.01.T01:intron 35.0%
! ATGCTTGGAAGTTGATTCTT+TGG - Chr8:86996642-86996661 MsG0880047485.01.T01:CDS 35.0%
! ATTTTTGCTTACAGTTTGGG+AGG + Chr8:86995929-86995910 None:intergenic 35.0%
! GTGCGAAAATAGCCAAATTT+TGG + Chr8:86994597-86994616 None:intergenic 35.0%
! GTTTTTGAATCCTATTGGGT+GGG - Chr8:86996138-86996157 MsG0880047485.01.T01:CDS 35.0%
! TAGAAGTTGATTCTCCTGAA+AGG - Chr8:86995592-86995611 MsG0880047485.01.T01:intron 35.0%
! TCGGTTGATTTAGTTTCTCT+CGG + Chr8:86994695-86994714 None:intergenic 35.0%
! TTTTTGAATCCTATTGGGTG+GGG - Chr8:86996139-86996158 MsG0880047485.01.T01:CDS 35.0%
! TTTTTGCTTACAGTTTGGGA+CGG - Chr8:86995911-86995930 MsG0880047485.01.T01:intron 35.0%
! TTTTTGCTTACAGTTTGGGA+GGG + Chr8:86995930-86995911 None:intergenic 35.0%
!! AAGAATACTGGTTCCGTTTA+TGG - Chr8:86994547-86994566 MsG0880047485.01.T01:CDS 35.0%
!! ACCTAGTTTTCAATTGTTGC+CGG - Chr8:86995151-86995170 MsG0880047485.01.T01:intron 35.0%
!! ACTTTTGGGTGATGAGATTT+TGG - Chr8:86995989-86996008 MsG0880047485.01.T01:CDS 35.0%
!! AGAATTCTCACACTGCTTTT+CGG + Chr8:86994714-86994733 None:intergenic 35.0%
!!! GGTCTTGTTTTTATTTTGGC+AGG - Chr8:86996577-86996596 MsG0880047485.01.T01:CDS 35.0%
ACCGGCAACAATTGAAAACT+AGG + Chr8:86995155-86995174 None:intergenic 40.0%
ACTTGAATGTGTAGGTACCA+CGG + Chr8:86994629-86994648 None:intergenic 40.0%
ATCCTTCTGCTAGAACCATA+TGG + Chr8:86996184-86996203 None:intergenic 40.0%
ATTCGTAGAACATCCACCAT+TGG + Chr8:86994799-86994818 None:intergenic 40.0%
CACGCATCAATAGACTTAGA+TGG - Chr8:86995726-86995745 MsG0880047485.01.T01:intron 40.0%
CTAGATTGACACAGTCCATA+TGG - Chr8:86996166-86996185 MsG0880047485.01.T01:CDS 40.0%
CTTCGCAGTTGTCAAGAAAA+TGG - Chr8:86995206-86995225 MsG0880047485.01.T01:intron 40.0%
GAAGCTTAAACATGCAGGTA+TGG + Chr8:86996305-86996324 None:intergenic 40.0%
GGGAGATTGAATTTCCTTTC+AGG + Chr8:86995609-86995628 None:intergenic 40.0%
TAAGCTCTCAACGTAATTGC+TGG + Chr8:86995342-86995361 None:intergenic 40.0%
! GGCACACCTATTTTGTCATA+TGG - Chr8:86995042-86995061 MsG0880047485.01.T01:intron 40.0%
! GGTACCTACACATTCAAGTT+TGG - Chr8:86994630-86994649 MsG0880047485.01.T01:intron 40.0%
! GGTTTTTGAATCCTATTGGG+TGG - Chr8:86996137-86996156 MsG0880047485.01.T01:CDS 40.0%
! GTTGATTCTTTGGCTCAGTT+TGG - Chr8:86996652-86996671 MsG0880047485.01.T01:CDS 40.0%
! TGAGTGGTGATGATGTTGTT+TGG - Chr8:86994733-86994752 MsG0880047485.01.T01:intron 40.0%
! TTTTGAATCCTATTGGGTGG+GGG - Chr8:86996140-86996159 MsG0880047485.01.T01:CDS 40.0%
!! AATGGTGGATGTTCTACGAA+TGG - Chr8:86994798-86994817 MsG0880047485.01.T01:intron 40.0%
!! AATTGGTTTGCCATTCACGA+CGG - Chr8:86994843-86994862 MsG0880047485.01.T01:intron 40.0%
!! TTTTGGAGAAGTTTGTCTGG+AGG + Chr8:86994580-86994599 None:intergenic 40.0%
AATATGGGGCCGAAGAATCT+TGG - Chr8:86995075-86995094 MsG0880047485.01.T01:intron 45.0%
AGCAGTGTGAGAATTCTGAG+TGG - Chr8:86994717-86994736 MsG0880047485.01.T01:intron 45.0%
AGTCAGTACAATCTGCCTTG+TGG - Chr8:86994945-86994964 MsG0880047485.01.T01:intron 45.0%
ATCAGGCACTTATAAGGTGC+TGG - Chr8:86994665-86994684 MsG0880047485.01.T01:intron 45.0%
CTCGAGCATAAGAAATGCGA+AGG + Chr8:86996383-86996402 None:intergenic 45.0%
GACAAAATAGGTGTGCCTGT+AGG + Chr8:86995039-86995058 None:intergenic 45.0%
GTCAGTACAATCTGCCTTGT+GGG - Chr8:86994946-86994965 MsG0880047485.01.T01:intron 45.0%
TGGAGGCTACGTTCCATAAA+CGG + Chr8:86994563-86994582 None:intergenic 45.0%
! GCATCCTCAAAAAGAAGCAC+CGG + Chr8:86995173-86995192 None:intergenic 45.0%
! GGTGATGATGTTGTTTGGAG+AGG - Chr8:86994738-86994757 MsG0880047485.01.T01:intron 45.0%
!! GTCCATATGGTTCTAGCAGA+AGG - Chr8:86996179-86996198 MsG0880047485.01.T01:CDS 45.0%
!! TTGGCTATTTTCGCACTGTC+AGG - Chr8:86994601-86994620 MsG0880047485.01.T01:intron 45.0%
!!! TGGGACGGAGAGTATTTTTC+TGG - Chr8:86995926-86995945 MsG0880047485.01.T01:intron 45.0%
ACCATTGATGCCGTCGTGAA+TGG + Chr8:86994856-86994875 None:intergenic 50.0%
ATTCCTCTTTGCTCCGCCAA+TGG - Chr8:86994780-86994799 MsG0880047485.01.T01:intron 50.0%
CGTAGAACATCCACCATTGG+CGG + Chr8:86994796-86994815 None:intergenic 50.0%
CTCCAATTGTTGGCGTGCTA+GGG - Chr8:86994991-86995010 MsG0880047485.01.T01:intron 50.0%
GGCAATTCATCGAACCCACA+AGG + Chr8:86994963-86994982 None:intergenic 50.0%
TCCAATTGTTGGCGTGCTAG+GGG - Chr8:86994992-86995011 MsG0880047485.01.T01:intron 50.0%
TTGCTTACAGTTTGGGAGGG+AGG + Chr8:86995821-86995840 None:intergenic 50.0%
! GTTGCCGGTGCTTCTTTTTG+AGG - Chr8:86995166-86995185 MsG0880047485.01.T01:intron 50.0%
ACGCCAACAATTGGAGCTGC+AGG + Chr8:86994987-86995006 None:intergenic 55.0%
ACGTCTCAGTCCCCAGATCA+AGG + Chr8:86994923-86994942 None:intergenic 55.0%
CCAACAATTGGAGCTGCAGG+TGG + Chr8:86994984-86995003 None:intergenic 55.0%
CCAATTGTTGGCGTGCTAGG+GGG - Chr8:86994993-86995012 MsG0880047485.01.T01:intron 55.0%
CCACCTGCAGCTCCAATTGT+TGG - Chr8:86994981-86995000 MsG0880047485.01.T01:intron 55.0%
CGGAGCAAAGAGGAATAGCG+GGG + Chr8:86994776-86994795 None:intergenic 55.0%
CGTCTCAGTCCCCAGATCAA+GGG + Chr8:86994922-86994941 None:intergenic 55.0%
GCCATTCACGACGGCATCAA+TGG - Chr8:86994852-86994871 MsG0880047485.01.T01:intron 55.0%
GCGGAGCAAAGAGGAATAGC+GGG + Chr8:86994777-86994796 None:intergenic 55.0%
GCTCCAATTGTTGGCGTGCT+AGG - Chr8:86994990-86995009 MsG0880047485.01.T01:intron 55.0%
GGCGGAGCAAAGAGGAATAG+CGG + Chr8:86994778-86994797 None:intergenic 55.0%
TGAATCCTATTGGGTGGGGG+TGG - Chr8:86996143-86996162 MsG0880047485.01.T01:CDS 55.0%
CCACCATTGGCGGAGCAAAG+AGG + Chr8:86994786-86994805 None:intergenic 60.0%
CCCCCTAGCACGCCAACAAT+TGG + Chr8:86994996-86995015 None:intergenic 60.0%
CCTCTTTGCTCCGCCAATGG+TGG - Chr8:86994783-86994802 MsG0880047485.01.T01:intron 60.0%
TCTAGCCACCCCCACCCAAT+AGG + Chr8:86996151-86996170 None:intergenic 60.0%
! TTTCGCACTGTCAGGTGCCG+TGG - Chr8:86994609-86994628 MsG0880047485.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 86994537 86996729 86994537 ID=MsG0880047485.01;Name=MsG0880047485.01
Chr8 mRNA 86994537 86996729 86994537 ID=MsG0880047485.01.T01;Parent=MsG0880047485.01;Name=MsG0880047485.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0|0|1|1|1|2|0|281
Chr8 exon 86995944 86996729 86995944 ID=MsG0880047485.01.T01:exon:18558;Parent=MsG0880047485.01.T01
Chr8 exon 86994537 86994596 86994537 ID=MsG0880047485.01.T01:exon:18557;Parent=MsG0880047485.01.T01
Chr8 CDS 86995944 86996729 86995944 ID=MsG0880047485.01.T01:cds;Parent=MsG0880047485.01.T01
Chr8 CDS 86994537 86994596 86994537 ID=MsG0880047485.01.T01:cds;Parent=MsG0880047485.01.T01
Gene Sequence

>MsG0880047485.01.T01

ATGGATTATCAAGAATACTGGTTCCGTTTATGGAACGTAGCCTCCAGACAAACTTCTCCAAAATTTGGCTATTTTCGCACTGTCAGGTGCCGTGGTACCTACACATTCAAGTTTGGTTGTGACAATTCATCAGGCACTTATAAGGTGCTGGCGTTCCGAGAGAAACTAAATCAACCGAAAAGCAGTGTGAGAATTCTGAGTGGTGATGATGTTGTTTGGAGAGGTATTGAAAGTTTCCCCGCTATTCCTCTTTGCTCCGCCAATGGTGGATGTTCTACGAATGGTGTATATTGTAGTGGCACTTTTAATTGGTTTGCCATTCACGACGGCATCAATGGTTATGATCTTGAGTATATTACAGTTGAACAACTTGTTATTGTTTCCCTTGATCTGGGGACTGAGACGTACAGTCAGTACAATCTGCCTTGTGGGTTCGATGAATTGCCACCTGCAGCTCCAATTGTTGGCGTGCTAGGGGGCTATCTTTGTTTTTCTTATTCCTACAGGCACACCTATTTTGTCATATGGCAGATGAAGAAATATGGGGCCGAAGAATCTTGGACTCAATTCCTTAAAATTAGTTACCAACATCTTCAAGTAAACTATGACTTAGCACCTAGTTTTCAATTGTTGCCGGTGCTTCTTTTTGAGGATGCTAATACATTGATACTTCGCAGTTGTCAAGAAAATGGAGCAATTCTCTATAATTGGAGAGATAACAAAGTCGAGAGAACAAACATTACTGCAAGTAAAGCTATTACCAATAATTATAGAACTAGCAATCAATTTGGAAATGACGAAGCTAAGAAGCCAATTCTTGTCAAGGGATATAGTAGTGAATTTTAA
Protein sequence

>MsG0880047485.01.T01

MDYQEYWFRLWNVASRQTSPKFGYFRTVRCRGTYTFKFGCDNSSGTYKVLAFREKLNQPKSSVRILSGDDVVWRGIESFPAIPLCSANGGCSTNGVYCSGTFNWFAIHDGINGYDLEYITVEQLVIVSLDLGTETYSQYNLPCGFDELPPAAPIVGVLGGYLCFSYSYRHTYFVIWQMKKYGAEESWTQFLKISYQHLQVNYDLAPSFQLLPVLLFEDANTLILRSCQENGAILYNWRDNKVERTNITASKAITNNYRTSNQFGNDEAKKPILVKGYSSEF*