AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039151.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039151.01.T01 MTR_7g066850 89.333 300 28 3 44 342 112 408 0.0 536
MsG0780039151.01.T01 MTR_7g066850 81.667 60 5 1 1 60 1 54 7.97e-21 93.6
MsG0780039151.01.T01 MTR_7g066840 62.752 298 96 5 47 342 117 401 3.64e-119 350
MsG0780039151.01.T01 MTR_7g066840 55.072 69 25 1 1 69 1 63 1.48e-11 65.5
MsG0780039151.01.T01 MTR_6g065510 44.828 348 164 12 1 338 1 330 6.46e-79 244
MsG0780039151.01.T01 MTR_7g445890 40.447 403 158 13 1 340 1 384 4.00e-72 229
MsG0780039151.01.T01 MTR_4g129190 42.179 358 157 16 15 338 48 389 1.86e-67 217
MsG0780039151.01.T01 MTR_2g043410 43.813 299 144 11 52 340 134 418 3.34e-67 217
MsG0780039151.01.T01 MTR_2g043400 43.189 301 145 10 52 340 133 419 4.07e-67 217
MsG0780039151.01.T01 MTR_1g442850 42.671 307 136 8 47 338 94 375 1.73e-65 211
MsG0780039151.01.T01 MTR_7g056290 41.391 302 149 11 52 339 134 421 1.36e-64 210
MsG0780039151.01.T01 MTR_7g060960 38.978 372 145 13 17 337 26 366 4.32e-64 207
MsG0780039151.01.T01 MTR_7g060940 41.346 312 137 14 43 337 110 392 1.52e-63 207
MsG0780039151.01.T01 MTR_7g055830 38.275 371 171 10 15 342 5 360 2.74e-63 205
MsG0780039151.01.T01 MTR_7g078900 40.127 314 147 10 52 338 123 422 2.85e-62 204
MsG0780039151.01.T01 MTR_7g055930 41.562 320 149 9 50 340 116 426 4.12e-62 204
MsG0780039151.01.T01 MTR_7g055870 41.562 320 149 9 50 340 116 426 5.67e-62 204
MsG0780039151.01.T01 MTR_0649s0020 42.105 304 140 12 53 339 104 388 5.86e-61 200
MsG0780039151.01.T01 MTR_4g013185 40.823 316 147 12 52 338 121 425 7.01e-61 201
MsG0780039151.01.T01 MTR_7g091630 41.615 322 143 13 48 338 123 430 1.14e-60 201
MsG0780039151.01.T01 MTR_7g056717 40.909 330 147 11 31 338 82 385 1.17e-60 199
MsG0780039151.01.T01 MTR_4g013175 40.273 293 142 7 52 324 121 400 1.30e-60 200
MsG0780039151.01.T01 MTR_8g066440 41.987 312 135 12 48 338 115 401 1.58e-60 199
MsG0780039151.01.T01 MTR_7g056710 41.830 306 137 12 44 337 103 379 1.60e-60 199
MsG0780039151.01.T01 MTR_5g069760 41.967 305 125 13 52 338 99 369 1.90e-60 198
MsG0780039151.01.T01 MTR_4g013180 41.696 283 134 10 52 317 102 370 2.29e-60 201
MsG0780039151.01.T01 MTR_7g056390 39.867 301 153 11 52 338 130 416 2.42e-60 199
MsG0780039151.01.T01 MTR_7g056003 41.967 305 148 11 52 340 118 409 3.96e-60 198
MsG0780039151.01.T01 MTR_7g050480 43.836 292 134 13 52 337 121 388 2.25e-59 196
MsG0780039151.01.T01 MTR_5g043160 44.586 314 127 15 52 339 166 458 3.82e-59 197
MsG0780039151.01.T01 MTR_7g050520 43.493 292 135 13 52 337 121 388 3.99e-59 195
MsG0780039151.01.T01 MTR_7g056737 41.100 309 140 10 31 318 82 369 5.17e-59 196
MsG0780039151.01.T01 MTR_0097s0030 41.935 310 129 14 52 339 108 388 2.37e-58 193
MsG0780039151.01.T01 MTR_2g047240 41.935 310 129 14 52 339 108 388 2.37e-58 193
MsG0780039151.01.T01 MTR_0128s0010 41.100 309 146 10 47 340 112 399 2.41e-58 194
MsG0780039151.01.T01 MTR_5g068040 43.581 296 139 10 54 337 100 379 3.65e-58 192
MsG0780039151.01.T01 MTR_7g057270 40.924 303 151 9 52 338 123 413 6.15e-58 193
MsG0780039151.01.T01 MTR_0128s0020 41.234 308 145 9 43 337 108 392 7.58e-58 192
MsG0780039151.01.T01 MTR_7g052150 41.447 304 150 13 43 337 114 398 8.42e-58 192
MsG0780039151.01.T01 MTR_1g088120 41.066 319 141 12 52 338 107 410 9.08e-58 192
MsG0780039151.01.T01 MTR_7g052670 39.628 323 141 10 52 340 124 426 1.18e-57 193
MsG0780039151.01.T01 MTR_5g069930 39.672 305 145 11 47 337 96 375 1.41e-57 191
MsG0780039151.01.T01 MTR_4g034860 40.411 292 135 8 47 318 120 392 1.78e-57 191
MsG0780039151.01.T01 MTR_7g056503 42.763 304 136 10 52 339 117 398 1.98e-57 191
MsG0780039151.01.T01 MTR_6g055210 38.378 370 183 12 7 342 65 423 2.49e-57 192
MsG0780039151.01.T01 MTR_4g033495 41.100 309 143 8 50 341 121 407 4.91e-57 191
MsG0780039151.01.T01 MTR_2g010950 37.500 320 162 10 45 338 97 404 5.73e-57 190
MsG0780039151.01.T01 MTR_4g008790 42.029 276 125 7 52 317 163 413 1.46e-56 191
MsG0780039151.01.T01 MTR_2g010920 35.817 349 171 13 16 338 103 424 1.83e-56 189
MsG0780039151.01.T01 MTR_7g009265 43.092 304 145 10 52 338 31 323 2.38e-56 186
MsG0780039151.01.T01 MTR_3g072470 36.043 369 187 13 7 339 63 418 2.54e-56 189
MsG0780039151.01.T01 MTR_7g061060 41.935 279 128 9 52 318 111 367 6.09e-56 187
MsG0780039151.01.T01 MTR_7g113500 36.212 359 187 12 6 338 39 381 6.49e-56 187
MsG0780039151.01.T01 MTR_7g078860 41.304 276 133 9 52 317 120 376 7.86e-56 187
MsG0780039151.01.T01 MTR_6g017305 42.403 283 141 9 69 340 12 283 1.24e-55 183
MsG0780039151.01.T01 MTR_3g464500 40.924 303 149 10 51 340 119 404 1.60e-55 186
MsG0780039151.01.T01 MTR_7g078840 39.871 311 148 10 52 338 120 415 1.75e-55 187
MsG0780039151.01.T01 MTR_7g056760 40.523 306 142 11 52 339 122 405 3.24e-55 186
MsG0780039151.01.T01 MTR_7g078040 38.125 320 171 8 22 321 91 403 3.56e-55 186
MsG0780039151.01.T01 MTR_3g464470 39.077 325 163 12 34 340 74 381 5.88e-55 184
MsG0780039151.01.T01 MTR_7g091640 42.636 258 123 10 23 262 98 348 6.86e-55 184
MsG0780039151.01.T01 MTR_7g062100 39.465 299 148 9 52 338 119 396 1.10e-54 184
MsG0780039151.01.T01 MTR_7g079160 39.000 300 139 12 52 324 125 407 3.92e-54 184
MsG0780039151.01.T01 MTR_0242s0060 40.000 290 150 10 43 317 106 386 5.06e-54 183
MsG0780039151.01.T01 MTR_0242s0040 40.000 290 150 10 43 317 106 386 5.06e-54 183
MsG0780039151.01.T01 MTR_7g055977 44.364 275 128 12 52 317 102 360 9.05e-54 181
MsG0780039151.01.T01 MTR_6g017295 41.611 298 133 9 52 318 41 328 1.10e-53 185
MsG0780039151.01.T01 MTR_2g047200 40.705 312 145 14 43 339 108 394 1.85e-53 181
MsG0780039151.01.T01 MTR_1g071010 39.748 317 140 13 45 340 102 388 2.96e-53 180
MsG0780039151.01.T01 MTR_5g096710 40.379 317 145 15 43 340 109 400 4.46e-53 180
MsG0780039151.01.T01 MTR_7g061090 38.393 336 159 12 29 338 92 405 7.12e-53 179
MsG0780039151.01.T01 MTR_7g028660 39.610 308 131 12 53 338 104 378 8.01e-53 179
MsG0780039151.01.T01 MTR_5g058620 40.702 285 134 9 77 339 11 282 1.35e-52 175
MsG0780039151.01.T01 MTR_1g058870 40.702 285 134 9 77 339 11 282 1.35e-52 175
MsG0780039151.01.T01 MTR_3g080370 38.810 353 169 11 21 342 85 421 1.57e-52 180
MsG0780039151.01.T01 MTR_6g088385 35.359 362 171 11 2 342 3 322 1.59e-52 176
MsG0780039151.01.T01 MTR_7g056260 46.119 219 107 6 43 257 105 316 2.28e-52 176
MsG0780039151.01.T01 MTR_4g030980 38.629 321 155 14 43 339 126 428 2.55e-52 179
MsG0780039151.01.T01 MTR_0128s0070 38.111 307 155 9 43 337 112 395 2.60e-52 178
MsG0780039151.01.T01 MTR_7g055953 44.856 243 117 9 96 338 89 314 6.11e-52 174
MsG0780039151.01.T01 MTR_7g056797 38.188 309 141 10 53 339 123 403 6.39e-52 177
MsG0780039151.01.T01 MTR_7g055987 46.364 220 98 7 48 263 114 317 9.99e-52 176
MsG0780039151.01.T01 MTR_7g070830 37.963 324 147 12 52 338 114 420 1.12e-51 177
MsG0780039151.01.T01 MTR_7g061010 40.580 276 129 12 69 337 139 386 1.63e-51 176
MsG0780039151.01.T01 MTR_4g031020 38.700 323 152 15 43 339 126 428 1.63e-51 176
MsG0780039151.01.T01 MTR_7g066100 38.580 324 137 13 47 338 100 393 1.81e-51 176
MsG0780039151.01.T01 MTR_7g070880 37.346 324 149 11 52 338 114 420 1.94e-51 176
MsG0780039151.01.T01 MTR_6g017280 40.323 310 141 14 52 340 103 389 3.03e-51 175
MsG0780039151.01.T01 MTR_5g056020 39.024 328 155 10 46 339 105 421 4.41e-51 177
MsG0780039151.01.T01 MTR_6g016285 38.154 325 159 10 47 342 110 421 6.28e-51 175
MsG0780039151.01.T01 MTR_0464s0020 36.888 347 188 13 13 340 96 430 7.58e-51 175
MsG0780039151.01.T01 MTR_7g062060 42.763 304 128 14 52 338 125 399 9.11e-51 174
MsG0780039151.01.T01 MTR_2g047892 39.550 311 146 15 46 339 112 397 1.06e-50 174
MsG0780039151.01.T01 MTR_3g437520 37.380 313 169 11 43 341 126 425 1.39e-50 175
MsG0780039151.01.T01 MTR_4g024890 41.333 300 141 13 52 338 107 384 1.44e-50 173
MsG0780039151.01.T01 MTR_7g061050 39.130 299 147 10 52 338 108 383 7.33e-50 171
MsG0780039151.01.T01 MTR_4g030830 36.932 352 184 15 8 340 63 395 7.62e-50 171
MsG0780039151.01.T01 MTR_7g056570 39.672 305 136 10 50 338 110 382 1.87e-49 171
MsG0780039151.01.T01 MTR_7g077070 36.145 332 171 12 39 338 107 429 2.08e-49 171
MsG0780039151.01.T01 MTR_7g077970 37.224 317 160 11 52 338 114 421 2.70e-49 171
MsG0780039151.01.T01 MTR_4g019990 38.801 317 152 14 43 340 97 390 3.72e-49 169
MsG0780039151.01.T01 MTR_4g030090 40.260 308 146 14 52 339 111 400 4.81e-49 169
MsG0780039151.01.T01 MTR_2g047895 39.145 304 138 15 47 333 32 305 6.34e-49 167
MsG0780039151.01.T01 MTR_7g056173 43.629 259 127 9 91 340 20 268 6.44e-49 167
MsG0780039151.01.T01 MTR_4g011660 36.970 330 157 11 43 340 109 419 9.14e-49 169
MsG0780039151.01.T01 MTR_2g010900 38.095 273 139 9 52 306 77 337 1.01e-48 168
MsG0780039151.01.T01 MTR_2g047878 38.614 303 131 11 47 339 107 364 1.26e-48 167
MsG0780039151.01.T01 MTR_0707s0020 36.486 370 181 13 1 342 104 447 1.59e-48 169
MsG0780039151.01.T01 MTR_7g066030 38.730 315 141 12 52 339 114 403 2.80e-48 167
MsG0780039151.01.T01 MTR_7g022600 35.866 329 162 13 43 339 111 422 7.86e-48 167
MsG0780039151.01.T01 MTR_7g077910 38.796 299 148 10 43 323 32 313 1.08e-47 164
MsG0780039151.01.T01 MTR_7g077990 38.351 279 144 10 43 317 113 367 3.55e-47 164
MsG0780039151.01.T01 MTR_2g006360 36.240 367 143 13 17 337 40 361 1.18e-46 162
MsG0780039151.01.T01 MTR_4g129160 41.065 263 116 11 52 296 119 360 1.83e-46 161
MsG0780039151.01.T01 MTR_6g086920 36.901 355 174 17 21 342 136 473 8.20e-46 163
MsG0780039151.01.T01 MTR_7g056200 36.913 298 142 8 53 340 122 383 1.40e-45 160
MsG0780039151.01.T01 MTR_3g013470 38.947 285 124 12 52 324 106 352 2.35e-45 159
MsG0780039151.01.T01 MTR_6g092560 37.025 316 151 12 52 342 107 399 3.01e-45 160
MsG0780039151.01.T01 MTR_7g066000 35.962 317 155 11 47 340 113 404 7.96e-45 158
MsG0780039151.01.T01 MTR_7g037670 33.835 399 136 14 1 338 1 332 1.32e-44 156
MsG0780039151.01.T01 MTR_7g035295 35.987 314 135 9 51 342 114 383 5.59e-44 155
MsG0780039151.01.T01 MTR_1g029650 37.580 314 143 13 52 337 114 402 8.02e-44 155
MsG0780039151.01.T01 MTR_7g056820 35.793 271 147 6 53 318 108 356 1.73e-43 154
MsG0780039151.01.T01 MTR_5g011350 44.865 185 85 4 47 227 68 239 2.96e-43 150
MsG0780039151.01.T01 MTR_7g034310 42.387 243 109 9 96 338 16 227 4.12e-43 149
MsG0780039151.01.T01 MTR_7g056023 40.580 276 114 11 1 237 9 273 8.97e-43 149
MsG0780039151.01.T01 MTR_2g461450 37.722 281 136 9 52 322 106 357 1.24e-42 151
MsG0780039151.01.T01 MTR_4g128320 33.333 333 144 11 1 324 1 264 1.34e-42 149
MsG0780039151.01.T01 MTR_7g078960 38.028 284 135 11 59 324 1 261 4.88e-42 148
MsG0780039151.01.T01 MTR_7g061940 42.453 212 99 7 98 309 78 266 8.57e-42 147
MsG0780039151.01.T01 MTR_4g030790 36.735 294 130 11 11 261 7 287 8.61e-42 149
MsG0780039151.01.T01 MTR_1g015730 38.264 311 141 14 45 337 116 393 1.15e-41 150
MsG0780039151.01.T01 MTR_5g069950 37.647 255 91 10 21 263 4 202 4.29e-40 140
MsG0780039151.01.T01 MTR_7g056170 34.012 344 143 8 41 340 158 461 8.15e-39 143
MsG0780039151.01.T01 MTR_7g066080 35.135 333 152 14 48 340 108 416 1.52e-38 142
MsG0780039151.01.T01 MTR_2g437110 35.897 312 136 13 52 340 124 394 3.53e-38 142
MsG0780039151.01.T01 MTR_7g066010 33.546 313 125 10 52 338 114 369 8.65e-38 139
MsG0780039151.01.T01 MTR_4g030110 37.586 290 135 11 42 318 120 376 2.19e-37 138
MsG0780039151.01.T01 MTR_7g022670 30.749 374 192 15 5 339 6 351 7.09e-37 136
MsG0780039151.01.T01 MTR_1g112010 34.641 306 146 11 44 340 66 326 9.59e-37 135
MsG0780039151.01.T01 MTR_7g066060 34.877 324 162 13 42 340 109 408 3.84e-36 137
MsG0780039151.01.T01 MTR_7g091610 39.450 218 113 8 125 338 44 246 4.72e-36 131
MsG0780039151.01.T01 MTR_7g445750 38.961 231 101 8 46 247 112 331 9.99e-36 132
MsG0780039151.01.T01 MTR_7g066830 63.043 92 34 0 47 138 90 181 1.31e-35 128
MsG0780039151.01.T01 MTR_2g010935 36.777 242 113 9 102 338 43 249 1.86e-35 129
MsG0780039151.01.T01 MTR_0267s0050 30.892 314 178 9 41 337 91 382 7.10e-35 131
MsG0780039151.01.T01 MTR_1g015740 31.481 378 142 12 20 337 5 325 9.82e-35 130
MsG0780039151.01.T01 MTR_6g081280 36.546 249 127 9 96 338 17 240 9.01e-34 125
MsG0780039151.01.T01 MTR_3g013950 29.747 316 181 9 41 337 91 384 2.96e-33 127
MsG0780039151.01.T01 MTR_4g030760 33.333 348 175 15 8 340 127 432 4.27e-33 127
MsG0780039151.01.T01 MTR_4g037465 33.214 280 150 9 52 316 115 372 9.62e-33 125
MsG0780039151.01.T01 MTR_2g060555 33.212 274 123 9 74 330 49 279 1.30e-32 123
MsG0780039151.01.T01 MTR_4g006350 31.879 298 172 10 52 337 595 873 5.67e-32 127
MsG0780039151.01.T01 MTR_7g078940 43.455 191 86 9 43 214 142 329 6.18e-32 124
MsG0780039151.01.T01 MTR_7g078880 31.677 322 149 11 19 317 5 278 7.46e-32 123
MsG0780039151.01.T01 MTR_2g027820 43.548 186 88 7 156 337 127 299 1.89e-31 120
MsG0780039151.01.T01 MTR_2g017720 34.177 237 130 6 101 334 83 296 1.79e-30 120
MsG0780039151.01.T01 MTR_8g101940 36.624 314 147 14 44 340 91 369 1.84e-30 119
MsG0780039151.01.T01 MTR_7g070440 35.000 240 106 9 52 263 95 312 2.83e-30 119
MsG0780039151.01.T01 MTR_8g030630 39.594 197 81 6 120 316 282 440 5.63e-29 116
MsG0780039151.01.T01 MTR_8g030630 37.766 188 91 6 135 317 72 238 1.65e-28 115
MsG0780039151.01.T01 MTR_7g061100 35.146 239 91 7 19 207 5 229 3.48e-27 109
MsG0780039151.01.T01 MTR_4g020000 35.294 238 123 9 90 317 106 322 4.11e-27 110
MsG0780039151.01.T01 MTR_7g058630 36.667 180 99 5 161 340 17 181 6.96e-27 105
MsG0780039151.01.T01 MTR_2g021150 33.108 296 149 14 52 338 113 368 8.56e-27 109
MsG0780039151.01.T01 MTR_7g056793 32.530 249 96 9 96 337 47 230 1.51e-26 105
MsG0780039151.01.T01 MTR_7g070900 32.364 275 115 8 1 262 161 377 2.52e-26 109
MsG0780039151.01.T01 MTR_1g047490 33.484 221 89 6 52 248 110 296 5.36e-26 106
MsG0780039151.01.T01 MTR_1g050542 33.028 218 115 9 52 261 146 340 1.09e-25 106
MsG0780039151.01.T01 MTR_6g017270 32.082 293 139 9 52 340 106 342 3.82e-25 104
MsG0780039151.01.T01 MTR_6g042600 29.375 320 166 10 17 320 30 305 1.65e-24 103
MsG0780039151.01.T01 MTR_7g006360 31.889 323 155 12 24 338 10 275 1.88e-24 101
MsG0780039151.01.T01 MTR_7g066040 39.205 176 76 9 52 200 25 196 4.92e-24 99.4
MsG0780039151.01.T01 MTR_1g097560 27.203 261 139 8 52 307 129 343 2.83e-23 99.8
MsG0780039151.01.T01 MTR_7g070937 44.030 134 59 5 96 217 11 140 2.86e-23 95.1
MsG0780039151.01.T01 MTR_2g046860 30.292 274 144 15 47 309 2 239 9.88e-23 97.1
MsG0780039151.01.T01 MTR_5g022420 30.153 262 139 12 52 309 120 341 4.63e-22 96.3
MsG0780039151.01.T01 MTR_3g009300 29.123 285 119 11 26 258 37 290 4.96e-22 95.9
MsG0780039151.01.T01 MTR_3g014570 29.893 281 139 11 53 316 122 361 5.80e-22 95.9
MsG0780039151.01.T01 MTR_1g097330 27.619 315 176 14 40 342 95 369 6.11e-22 96.3
MsG0780039151.01.T01 MTR_2g046800 31.111 225 116 11 47 260 135 331 9.31e-22 95.5
MsG0780039151.01.T01 MTR_7g050490 57.647 85 30 3 52 133 107 188 1.23e-21 91.3
MsG0780039151.01.T01 MTR_0044s0300 29.195 298 155 13 53 338 136 389 2.48e-21 94.4
MsG0780039151.01.T01 MTR_2g021190 32.444 225 100 10 52 256 116 308 3.83e-21 93.6
MsG0780039151.01.T01 MTR_6g021880 27.607 326 168 15 36 338 101 381 7.40e-21 92.8
MsG0780039151.01.T01 MTR_2g046900 27.723 303 172 14 47 338 118 384 9.48e-21 92.4
MsG0780039151.01.T01 MTR_1g055375 28.197 305 158 13 52 338 105 366 1.04e-20 92.0
MsG0780039151.01.T01 MTR_3g011100 32.883 222 106 9 52 257 332 526 1.24e-20 93.2
MsG0780039151.01.T01 MTR_6g007135 28.713 303 169 15 49 338 121 389 1.26e-20 92.0
MsG0780039151.01.T01 MTR_2g047832 29.181 281 153 14 47 309 119 371 1.56e-20 92.0
MsG0780039151.01.T01 MTR_0128s0110 31.343 201 111 6 121 316 4 182 2.03e-20 88.6
MsG0780039151.01.T01 MTR_3g024130 31.250 224 106 11 52 257 58 251 2.15e-20 90.5
MsG0780039151.01.T01 MTR_7g407070 30.702 228 112 9 53 257 134 338 2.39e-20 91.7
MsG0780039151.01.T01 MTR_3g014540 29.964 277 139 11 53 314 122 358 2.81e-20 91.3
MsG0780039151.01.T01 MTR_3g013770 26.690 281 152 9 52 318 132 372 7.11e-20 90.1
MsG0780039151.01.T01 MTR_2g029990 31.944 216 111 11 52 256 148 338 9.14e-20 89.7
MsG0780039151.01.T01 MTR_5g046300 30.476 210 114 9 55 257 100 284 9.17e-20 89.4
MsG0780039151.01.T01 MTR_5g046290 30.476 210 114 9 55 257 100 284 9.17e-20 89.4
MsG0780039151.01.T01 MTR_3g011020 28.622 283 123 10 53 316 131 353 9.81e-20 89.4
MsG0780039151.01.T01 MTR_7g089830 35.976 164 82 5 154 316 7 148 1.09e-19 84.7
MsG0780039151.01.T01 MTR_2g046920 30.000 250 129 12 24 254 83 305 1.09e-19 89.4
MsG0780039151.01.T01 MTR_3g036290 29.665 209 115 8 52 258 117 295 1.42e-19 89.0
MsG0780039151.01.T01 MTR_3g083660 30.738 244 116 10 16 256 17 210 1.85e-19 87.4
MsG0780039151.01.T01 MTR_7g013590 25.000 316 185 13 42 341 116 395 2.10e-19 89.0
MsG0780039151.01.T01 MTR_3g007360 30.357 280 137 11 53 314 144 383 2.26e-19 88.6
MsG0780039151.01.T01 MTR_3g010590 27.835 291 156 14 56 338 141 385 2.41e-19 88.6
MsG0780039151.01.T01 MTR_3g436150 32.314 229 102 13 53 257 133 332 3.00e-19 88.2
MsG0780039151.01.T01 MTR_5g046280 30.000 210 115 9 55 257 3 187 3.14e-19 86.3
MsG0780039151.01.T01 MTR_6g007150 28.155 309 166 16 49 338 66 337 3.74e-19 87.4
MsG0780039151.01.T01 MTR_3g055000 35.762 151 71 5 189 338 1 126 5.32e-19 82.4
MsG0780039151.01.T01 MTR_2g046830 29.130 230 132 8 47 269 115 320 7.34e-19 87.0
MsG0780039151.01.T01 MTR_3g009240 31.963 219 107 8 53 257 127 317 9.19e-19 86.7
MsG0780039151.01.T01 MTR_6g027910 26.899 316 162 12 47 338 104 374 1.06e-18 86.7
MsG0780039151.01.T01 MTR_3g007270 31.674 221 110 12 53 258 151 345 1.07e-18 86.7
MsG0780039151.01.T01 MTR_1g094210 28.082 292 160 12 52 338 152 398 1.09e-18 86.7
MsG0780039151.01.T01 MTR_1g055065 27.974 311 157 15 53 338 19 287 1.21e-18 85.1
MsG0780039151.01.T01 MTR_3g010920 29.592 294 142 16 55 338 143 381 1.28e-18 86.3
MsG0780039151.01.T01 MTR_2g021155 29.831 295 148 14 36 314 111 362 1.38e-18 87.4
MsG0780039151.01.T01 MTR_4g108820 26.552 290 130 11 20 261 39 293 1.52e-18 85.5
MsG0780039151.01.T01 MTR_6g065980 30.288 208 111 8 53 256 109 286 1.79e-18 85.9
MsG0780039151.01.T01 MTR_7g445580 38.017 121 59 2 198 318 42 146 2.09e-18 81.3
MsG0780039151.01.T01 MTR_1g054575 26.923 286 147 13 37 312 133 366 2.57e-18 86.3
MsG0780039151.01.T01 MTR_1g097490 27.675 271 133 12 52 309 142 362 2.74e-18 85.5
MsG0780039151.01.T01 MTR_2g078900 30.415 217 124 8 43 256 121 313 3.28e-18 84.7
MsG0780039151.01.T01 MTR_3g030320 30.047 213 111 9 53 256 44 227 3.34e-18 84.0
MsG0780039151.01.T01 MTR_8g467140 25.614 285 164 13 5 265 66 326 3.41e-18 84.3
MsG0780039151.01.T01 MTR_5g007610 25.249 301 158 12 41 316 125 383 4.21e-18 85.1
MsG0780039151.01.T01 MTR_1g094210 28.319 226 133 8 52 275 152 350 4.69e-18 85.1
MsG0780039151.01.T01 MTR_3g010970 29.150 247 128 11 21 258 114 322 7.89e-18 84.0
MsG0780039151.01.T01 MTR_3g007410 29.643 280 139 11 53 314 144 383 8.00e-18 84.3
MsG0780039151.01.T01 MTR_3g096270 31.064 235 93 8 4 199 23 227 1.04e-17 82.4
MsG0780039151.01.T01 MTR_3g006640 25.868 317 163 15 53 339 19 293 1.09e-17 82.4
MsG0780039151.01.T01 MTR_8g101580 25.806 341 183 15 13 338 109 394 1.22e-17 83.6
MsG0780039151.01.T01 MTR_3g007330 30.317 221 110 10 53 257 136 328 1.45e-17 83.2
MsG0780039151.01.T01 MTR_2g078870 29.680 219 125 7 43 258 46 238 1.60e-17 82.4
MsG0780039151.01.T01 MTR_7g021580 34.694 196 68 8 23 167 33 219 1.82e-17 82.0
MsG0780039151.01.T01 MTR_7g021580 44.792 96 38 4 244 338 219 300 1.15e-11 65.1
MsG0780039151.01.T01 MTR_3g011060 27.368 285 144 12 53 318 131 371 1.85e-17 83.2
MsG0780039151.01.T01 MTR_3g010520 29.110 292 145 18 55 338 122 359 2.05e-17 82.8
MsG0780039151.01.T01 MTR_5g011200 28.241 216 119 9 52 256 115 305 2.11e-17 82.8
MsG0780039151.01.T01 MTR_1g097370 28.296 311 172 14 19 316 64 336 2.86e-17 82.8
MsG0780039151.01.T01 MTR_1g054725 25.733 307 162 14 52 338 115 375 4.53e-17 81.6
MsG0780039151.01.T01 MTR_6g004660 28.477 302 163 16 52 338 117 380 7.03e-17 81.3
MsG0780039151.01.T01 MTR_7g056723 38.281 128 62 4 50 169 34 152 7.34e-17 77.8
MsG0780039151.01.T01 MTR_3g009260 31.064 235 122 11 35 257 113 319 7.73e-17 81.3
MsG0780039151.01.T01 MTR_3g010390 29.018 224 122 9 51 257 133 336 2.64e-16 79.7
MsG0780039151.01.T01 MTR_4g031770 28.959 221 112 10 52 256 98 289 2.73e-16 79.3
MsG0780039151.01.T01 MTR_3g030350 33.333 219 113 11 53 263 130 323 2.95e-16 79.3
MsG0780039151.01.T01 MTR_3g024110 26.721 247 133 7 98 338 243 447 4.00e-16 79.3
MsG0780039151.01.T01 MTR_3g006570 30.222 225 118 7 44 256 108 305 5.12e-16 78.6
MsG0780039151.01.T01 MTR_3g006670 27.234 235 127 10 52 270 144 350 5.36e-16 79.0
MsG0780039151.01.T01 MTR_2g055970 27.344 256 138 12 29 261 271 501 6.19e-16 79.0
MsG0780039151.01.T01 MTR_3g055070 32.000 150 72 5 189 334 1 124 7.08e-16 74.7
MsG0780039151.01.T01 MTR_4g055060 29.386 228 111 9 52 258 125 323 7.50e-16 78.2
MsG0780039151.01.T01 MTR_1g058190 33.140 172 85 8 98 256 150 304 8.51e-16 77.8
MsG0780039151.01.T01 MTR_4g061340 30.864 243 110 12 43 257 104 316 9.51e-16 77.8
MsG0780039151.01.T01 MTR_4g107820 24.342 304 175 12 49 340 127 387 2.03e-15 77.0
MsG0780039151.01.T01 MTR_4g107780 24.342 304 175 12 49 340 127 387 2.03e-15 77.0
MsG0780039151.01.T01 MTR_4g107780 25.000 304 173 13 49 340 127 387 2.15e-15 77.0
MsG0780039151.01.T01 MTR_4g107820 25.000 304 173 13 49 340 127 387 2.21e-15 77.0
MsG0780039151.01.T01 MTR_6g053260 29.224 219 113 11 52 256 434 624 2.50e-15 77.4
MsG0780039151.01.T01 MTR_3g010870 30.660 212 111 11 55 258 134 317 2.92e-15 76.6
MsG0780039151.01.T01 MTR_4g006840 35.714 168 73 9 40 198 78 219 4.95e-15 73.9
MsG0780039151.01.T01 MTR_8g054320 31.274 259 131 15 9 257 17 238 5.00e-15 75.1
MsG0780039151.01.T01 MTR_3g007430 29.437 231 109 12 49 256 129 328 5.83e-15 75.5
MsG0780039151.01.T01 MTR_1g113900 29.218 243 125 12 101 338 45 245 7.06e-15 73.6
MsG0780039151.01.T01 MTR_6g027890 25.688 327 156 12 48 338 49 324 7.32e-15 74.7
MsG0780039151.01.T01 MTR_1g016960 46.154 91 35 3 77 164 72 151 9.30e-15 73.6
MsG0780039151.01.T01 MTR_1g016960 36.449 107 60 2 234 337 153 254 9.58e-11 62.0
MsG0780039151.01.T01 MTR_3g030240 26.545 275 141 13 72 338 156 377 1.17e-14 74.7
MsG0780039151.01.T01 MTR_7g060930 49.206 63 29 1 182 244 19 78 1.42e-14 68.6
MsG0780039151.01.T01 MTR_4g024870 33.333 210 105 11 52 239 142 338 3.27e-14 73.6
MsG0780039151.01.T01 MTR_2g078850 28.111 217 132 7 43 256 118 313 4.32e-14 72.8
MsG0780039151.01.T01 MTR_1004s0010 23.684 304 177 11 41 338 105 359 6.35e-14 72.4
MsG0780039151.01.T01 MTR_7g062070 36.434 129 67 5 192 317 75 191 1.46e-13 68.9
MsG0780039151.01.T01 MTR_3g007300 29.524 210 107 8 52 257 131 303 1.47e-13 71.2
MsG0780039151.01.T01 MTR_6g014720 27.234 235 135 10 33 256 91 300 2.43e-13 70.9
MsG0780039151.01.T01 MTR_3g009290 34.337 166 82 9 41 196 109 257 3.18e-13 69.3
MsG0780039151.01.T01 MTR_5g046260 27.778 234 104 10 52 272 94 275 3.35e-13 69.7
MsG0780039151.01.T01 MTR_0354s0030 41.346 104 50 2 241 340 1 97 5.08e-13 64.7
MsG0780039151.01.T01 MTR_6g048150 50.562 89 29 5 238 321 13 91 1.02e-12 65.1
MsG0780039151.01.T01 MTR_3g034180 27.170 265 145 11 36 279 200 437 1.13e-12 68.9
MsG0780039151.01.T01 MTR_8g062660 27.311 238 110 10 54 262 118 321 1.35e-12 68.9
MsG0780039151.01.T01 MTR_4g023130 24.719 267 147 10 23 261 9 249 1.75e-12 67.8
MsG0780039151.01.T01 MTR_3g023940 26.552 290 162 13 56 338 138 383 1.76e-12 68.2
MsG0780039151.01.T01 MTR_4g023080 26.047 215 128 8 52 261 102 290 1.96e-12 67.8
MsG0780039151.01.T01 MTR_3g036430 29.108 213 109 8 53 256 94 273 2.39e-12 67.4
MsG0780039151.01.T01 MTR_1g114650 29.240 171 92 6 90 256 13 158 3.08e-12 65.9
MsG0780039151.01.T01 MTR_4g053470 32.000 200 84 10 107 299 145 299 3.59e-12 66.6
MsG0780039151.01.T01 MTR_2g028160 25.263 285 154 13 53 311 105 356 7.26e-12 66.2
MsG0780039151.01.T01 MTR_1g068835 25.410 244 138 11 36 258 73 293 9.19e-12 65.9
MsG0780039151.01.T01 MTR_4g132560 27.652 264 126 13 97 338 38 258 9.93e-12 64.7
MsG0780039151.01.T01 MTR_6g004210 26.360 239 137 12 41 256 116 338 1.22e-11 65.9
MsG0780039151.01.T01 MTR_1g097510 28.351 194 92 9 123 309 91 244 1.51e-11 64.7
MsG0780039151.01.T01 MTR_3g083010 23.625 309 164 15 47 318 101 374 1.87e-11 65.1
MsG0780039151.01.T01 MTR_3g034130 24.727 275 160 10 49 306 101 345 1.90e-11 65.1
MsG0780039151.01.T01 MTR_1g097520 27.389 157 86 6 55 203 8 144 2.28e-11 62.0
MsG0780039151.01.T01 MTR_7g056727 43.182 88 36 3 49 122 54 141 3.94e-11 62.8
MsG0780039151.01.T01 MTR_3g096280 30.233 172 86 7 43 202 99 248 4.30e-11 63.5
MsG0780039151.01.T01 MTR_1g055055 27.317 205 112 7 52 256 126 293 5.25e-11 63.5
MsG0780039151.01.T01 MTR_4g021785 26.829 205 126 9 52 254 102 284 7.36e-11 63.2
MsG0780039151.01.T01 MTR_7g067680 26.341 205 111 8 52 256 151 315 8.49e-11 63.2
MsG0780039151.01.T01 MTR_1g112930 26.818 220 111 9 53 258 123 306 8.63e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039151.01.T01 AT3G06240 25.743 303 165 13 52 340 165 421 6.81e-15 75.9
MsG0780039151.01.T01 AT3G23880 27.111 225 123 8 45 256 105 301 3.24e-11 64.3

Find 72 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTGTAGCCAACTTTAA+AGG 0.159504 7:-58719897 None:intergenic
TGCGATCATCTCACTTGATT+TGG 0.224639 7:+58720024 MsG0780039151.01.T01:CDS
CATCTTCCATAAAACAAAAT+TGG 0.231715 7:-58720173 None:intergenic
AAATGCAATCTTTGATCTAT+TGG 0.240535 7:-58719747 None:intergenic
TGAAACTTCTTATGCGATTC+AGG 0.255351 7:+58719374 MsG0780039151.01.T01:CDS
AATGGTTTGGTTTGCTTGCT+TGG 0.255971 7:+58719641 MsG0780039151.01.T01:CDS
CAATAATTACGTTGATAGTT+TGG 0.266445 7:+58720459 MsG0780039151.01.T01:CDS
GCCAACTATTTGTGTGCTTA+TGG 0.267716 7:+58720108 MsG0780039151.01.T01:CDS
TTAGTTTGGGTAATAATATT+TGG 0.268553 7:+58719840 MsG0780039151.01.T01:CDS
GCGATCATCTCACTTGATTT+GGG 0.275112 7:+58720025 MsG0780039151.01.T01:CDS
ATTTGAGCGGAACTCTTAAT+TGG 0.319875 7:+58719942 MsG0780039151.01.T01:CDS
TTCTCAGAATGACACAATAA+TGG 0.321934 7:-58720322 None:intergenic
TAATTCAACGGACACATATA+AGG 0.335755 7:+58719778 MsG0780039151.01.T01:CDS
AATAGATCAAAGATTGCATT+TGG 0.368654 7:+58719749 MsG0780039151.01.T01:CDS
TTATAACTACCAAAGGAAAA+AGG 0.371439 7:+58720425 MsG0780039151.01.T01:CDS
GACAACTAATTCTCTACAAT+TGG 0.375035 7:+58720380 MsG0780039151.01.T01:CDS
AGTTCATCGGGGAGAATTAC+CGG 0.378646 7:-58719322 None:intergenic
TCCGATACTTTCCTTGTGGC+CGG 0.390553 7:-58719701 None:intergenic
TGTGTTGTTGGTTCCTGCAA+TGG 0.402984 7:+58719623 MsG0780039151.01.T01:CDS
CTATTGTAGCCAACTTTAAA+GGG 0.406904 7:-58719896 None:intergenic
CAAGCAAACCAAACCATTGC+AGG 0.419753 7:-58719636 None:intergenic
TACAATAGTTGTCGTGGTCT+TGG 0.445264 7:+58719911 MsG0780039151.01.T01:CDS
TCTCAGAATGACACAATAAT+GGG 0.446829 7:-58720321 None:intergenic
CCGATACTTTCCTTGTGGCC+GGG 0.448275 7:-58719700 None:intergenic
GAAGATAACCTCTGTGTTGT+TGG 0.449330 7:+58719611 MsG0780039151.01.T01:CDS
TATACGATGATTCGAAGAAT+AGG 0.449921 7:+58719987 MsG0780039151.01.T01:CDS
GATCGGCGTCGTGACTTAGC+TGG 0.454159 7:-58719277 None:intergenic
AACAAAATTGGTGGTTCCCA+TGG 0.455941 7:-58720161 None:intergenic
TGTTGGTTCCTGCAATGGTT+TGG 0.456820 7:+58719628 MsG0780039151.01.T01:CDS
GTAATGATAATCTTCAAATA+AGG 0.460692 7:+58720242 MsG0780039151.01.T01:CDS
TTTGTTCAGCATCATGTCGT+TGG 0.462579 7:+58720293 MsG0780039151.01.T01:CDS
TTGTTCAGCATCATGTCGTT+GGG 0.470030 7:+58720294 MsG0780039151.01.T01:CDS
TTATGGAAGATGAAGAACTT+TGG 0.472225 7:+58720184 MsG0780039151.01.T01:CDS
GATAGTTTGGTTTCGACGAA+TGG 0.482996 7:+58720472 MsG0780039151.01.T01:CDS
GATAGAGACATACACACAAT+TGG 0.487309 7:+58720048 MsG0780039151.01.T01:CDS
TCCATAAGCACACAAATAGT+TGG 0.491724 7:-58720109 None:intergenic
GAGCGGAACTCTTAATTGGT+TGG 0.497771 7:+58719946 MsG0780039151.01.T01:CDS
ACTTCACAGACAAGTTCATC+GGG 0.500431 7:-58719334 None:intergenic
GAATTAGTTGTCCTACTCTA+CGG 0.504274 7:-58720369 None:intergenic
ATGACAGTTGCGCAAGGGAT+CGG 0.504667 7:-58719294 None:intergenic
CTACAATTGGAGGACTAATA+CGG 0.510511 7:+58720393 MsG0780039151.01.T01:CDS
AACTAATTCTCTACAATTGG+AGG 0.512072 7:+58720383 MsG0780039151.01.T01:CDS
GAATCGCATAAGAAGTTTCA+CGG 0.519429 7:-58719371 None:intergenic
CTTCCATAAAACAAAATTGG+TGG 0.519755 7:-58720170 None:intergenic
ACACTTCATCAGAACCTTGA+GGG 0.520743 7:-58720075 None:intergenic
GCATAAGAAGTTTCACGGTA+AGG 0.526679 7:-58719366 None:intergenic
AATAGTTGTCGTGGTCTTGG+TGG 0.540912 7:+58719914 MsG0780039151.01.T01:CDS
CACTTCACAGACAAGTTCAT+CGG 0.556015 7:-58719335 None:intergenic
AACGGACACATATAAGGTTG+TGG 0.561340 7:+58719784 MsG0780039151.01.T01:CDS
GTGGAGATGACAGTTGCGCA+AGG 0.564782 7:-58719300 None:intergenic
TGCGCAACTGTCATCTCCAC+CGG 0.565278 7:+58719303 MsG0780039151.01.T01:CDS
ACACAATTGGTGGCCCCTCA+AGG 0.571849 7:+58720061 MsG0780039151.01.T01:CDS
TGAACATCACTGCAGATTGA+CGG 0.574493 7:+58719589 MsG0780039151.01.T01:intron
CCCGGCCACAAGGAAAGTAT+CGG 0.581869 7:+58719700 MsG0780039151.01.T01:CDS
CAATTGGAGGACTAATACGG+TGG 0.582938 7:+58720396 MsG0780039151.01.T01:CDS
GAGCGAATTATAACTACCAA+AGG 0.587671 7:+58720418 MsG0780039151.01.T01:CDS
CGATCATCTCACTTGATTTG+GGG 0.592513 7:+58720026 MsG0780039151.01.T01:CDS
CGGCGTCGTGACTTAGCTGG+AGG 0.599750 7:-58719274 None:intergenic
TTATTGTGTCATTCTGAGAA+CGG 0.599839 7:+58720325 MsG0780039151.01.T01:CDS
AGAGACATACACACAATTGG+TGG 0.605181 7:+58720051 MsG0780039151.01.T01:CDS
ATGTTGGCAAACCGTAGAGT+AGG 0.609050 7:+58720358 MsG0780039151.01.T01:CDS
GTTGGCTACAATAGTTGTCG+TGG 0.621035 7:+58719905 MsG0780039151.01.T01:CDS
ATTTCTATAACCCGGCCACA+AGG 0.622457 7:+58719690 MsG0780039151.01.T01:CDS
TGGAGATGACAGTTGCGCAA+GGG 0.637523 7:-58719299 None:intergenic
GAACGGTGATACATTGATGT+TGG 0.640128 7:+58720342 MsG0780039151.01.T01:CDS
CTTGGTGGTGTGTATTTGAG+CGG 0.645272 7:+58719929 MsG0780039151.01.T01:CDS
AACACTTCATCAGAACCTTG+AGG 0.659599 7:-58720076 None:intergenic
CACTTCATCAGAACCTTGAG+GGG 0.662577 7:-58720074 None:intergenic
GGCGTCGTGACTTAGCTGGA+GGG 0.677357 7:-58719273 None:intergenic
TCATCGGGGAGAATTACCGG+TGG 0.727497 7:-58719319 None:intergenic
TGCAGGAACCAACAACACAG+AGG 0.762462 7:-58719619 None:intergenic
CTTCACAGACAAGTTCATCG+GGG 0.801261 7:-58719333 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTAATCAATTAGAAAAT+TGG + Chr7:58719663-58719682 MsG0780039151.01.T01:CDS 15.0%
!! GTAATGATAATCTTCAAATA+AGG + Chr7:58720242-58720261 MsG0780039151.01.T01:CDS 20.0%
!! TTTAAAGGGAATAAAAACAT+CGG - Chr7:58719885-58719904 None:intergenic 20.0%
!!! ATTTGGTTTTGATAATTCAA+CGG + Chr7:58719766-58719785 MsG0780039151.01.T01:CDS 20.0%
!!! TTAGTTTGGGTAATAATATT+TGG + Chr7:58719840-58719859 MsG0780039151.01.T01:CDS 20.0%
! AAATGCAATCTTTGATCTAT+TGG - Chr7:58719750-58719769 None:intergenic 25.0%
! AATAGATCAAAGATTGCATT+TGG + Chr7:58719749-58719768 MsG0780039151.01.T01:CDS 25.0%
! AGTTAAGATGACAAAAACAA+AGG - Chr7:58720138-58720157 None:intergenic 25.0%
! ATGTCTTAATAGTCAATTCT+TGG + Chr7:58719522-58719541 MsG0780039151.01.T01:intron 25.0%
! CATCTTCCATAAAACAAAAT+TGG - Chr7:58720176-58720195 None:intergenic 25.0%
! GAATTGACTATTAAGACATT+TGG - Chr7:58719521-58719540 None:intergenic 25.0%
! TTAAAGGGAATAAAAACATC+GGG - Chr7:58719884-58719903 None:intergenic 25.0%
! TTATAACTACCAAAGGAAAA+AGG + Chr7:58720425-58720444 MsG0780039151.01.T01:CDS 25.0%
!! AAAAATTAGGGTCTTTTACA+AGG + Chr7:58719723-58719742 MsG0780039151.01.T01:CDS 25.0%
!!! CAATAATTACGTTGATAGTT+TGG + Chr7:58720459-58720478 MsG0780039151.01.T01:CDS 25.0%
!!! GGTGAATTTTGATAAAACTA+GGG - Chr7:58719435-58719454 None:intergenic 25.0%
!!! GTTTTTATTCCCTTTAAAGT+TGG + Chr7:58719887-58719906 MsG0780039151.01.T01:CDS 25.0%
!!! TGGTGAATTTTGATAAAACT+AGG - Chr7:58719436-58719455 None:intergenic 25.0%
!!! TTGGTTTTATTTCTATAACC+CGG + Chr7:58719682-58719701 MsG0780039151.01.T01:CDS 25.0%
AACTAATTCTCTACAATTGG+AGG + Chr7:58720383-58720402 MsG0780039151.01.T01:CDS 30.0%
ACTATTGTAGCCAACTTTAA+AGG - Chr7:58719900-58719919 None:intergenic 30.0%
CTATTGTAGCCAACTTTAAA+GGG - Chr7:58719899-58719918 None:intergenic 30.0%
CTTCCATAAAACAAAATTGG+TGG - Chr7:58720173-58720192 None:intergenic 30.0%
GACAACTAATTCTCTACAAT+TGG + Chr7:58720380-58720399 MsG0780039151.01.T01:CDS 30.0%
TAATTCAACGGACACATATA+AGG + Chr7:58719778-58719797 MsG0780039151.01.T01:CDS 30.0%
TATACGATGATTCGAAGAAT+AGG + Chr7:58719987-58720006 MsG0780039151.01.T01:CDS 30.0%
TCTCAGAATGACACAATAAT+GGG - Chr7:58720324-58720343 None:intergenic 30.0%
TTATGGAAGATGAAGAACTT+TGG + Chr7:58720184-58720203 MsG0780039151.01.T01:CDS 30.0%
TTCTCAGAATGACACAATAA+TGG - Chr7:58720325-58720344 None:intergenic 30.0%
! TGTCATCTTAACTTTTCCAT+GGG + Chr7:58720145-58720164 MsG0780039151.01.T01:CDS 30.0%
! TTATTGTGTCATTCTGAGAA+CGG + Chr7:58720325-58720344 MsG0780039151.01.T01:CDS 30.0%
! TTGTCATCTTAACTTTTCCA+TGG + Chr7:58720144-58720163 MsG0780039151.01.T01:CDS 30.0%
! TTTTTCGCTCAGATTTCTTT+TGG - Chr7:58719456-58719475 None:intergenic 30.0%
!! ACTTTGGAGTTGAAAAATCT+TGG + Chr7:58720200-58720219 MsG0780039151.01.T01:CDS 30.0%
!! AGGAAAGTATCGGAAAAATT+AGG + Chr7:58719710-58719729 MsG0780039151.01.T01:CDS 30.0%
!! GGAAAGTATCGGAAAAATTA+GGG + Chr7:58719711-58719730 MsG0780039151.01.T01:CDS 30.0%
!!! AGATGTGAGAGTTTTTAGTT+TGG + Chr7:58719826-58719845 MsG0780039151.01.T01:CDS 30.0%
!!! GAACCACCAATTTTGTTTTA+TGG + Chr7:58720167-58720186 MsG0780039151.01.T01:CDS 30.0%
!!! GATGTGAGAGTTTTTAGTTT+GGG + Chr7:58719827-58719846 MsG0780039151.01.T01:CDS 30.0%
ATTAAGACATTTGGACACGA+TGG - Chr7:58719512-58719531 None:intergenic 35.0%
ATTTGAGCGGAACTCTTAAT+TGG + Chr7:58719942-58719961 MsG0780039151.01.T01:CDS 35.0%
CTACAATTGGAGGACTAATA+CGG + Chr7:58720393-58720412 MsG0780039151.01.T01:CDS 35.0%
GAATCGCATAAGAAGTTTCA+CGG - Chr7:58719374-58719393 None:intergenic 35.0%
GAATTAGTTGTCCTACTCTA+CGG - Chr7:58720372-58720391 None:intergenic 35.0%
GAGCGAATTATAACTACCAA+AGG + Chr7:58720418-58720437 MsG0780039151.01.T01:CDS 35.0%
GATAGAGACATACACACAAT+TGG + Chr7:58720048-58720067 MsG0780039151.01.T01:CDS 35.0%
TAACTACCAAAGGAAAAAGG+CGG + Chr7:58720428-58720447 MsG0780039151.01.T01:CDS 35.0%
TCCATAAGCACACAAATAGT+TGG - Chr7:58720112-58720131 None:intergenic 35.0%
TGAAACTTCTTATGCGATTC+AGG + Chr7:58719374-58719393 MsG0780039151.01.T01:CDS 35.0%
! TTTTTCCGATACTTTCCTTG+TGG - Chr7:58719708-58719727 None:intergenic 35.0%
AACACTTCATCAGAACCTTG+AGG - Chr7:58720079-58720098 None:intergenic 40.0%
AACGGACACATATAAGGTTG+TGG + Chr7:58719784-58719803 MsG0780039151.01.T01:CDS 40.0%
AACTACCAAAGGAAAAAGGC+GGG + Chr7:58720429-58720448 MsG0780039151.01.T01:CDS 40.0%
ACACTTCATCAGAACCTTGA+GGG - Chr7:58720078-58720097 None:intergenic 40.0%
ACTTCACAGACAAGTTCATC+GGG - Chr7:58719337-58719356 None:intergenic 40.0%
AGAGACATACACACAATTGG+TGG + Chr7:58720051-58720070 MsG0780039151.01.T01:CDS 40.0%
CACTTCACAGACAAGTTCAT+CGG - Chr7:58719338-58719357 None:intergenic 40.0%
GAACGGTGATACATTGATGT+TGG + Chr7:58720342-58720361 MsG0780039151.01.T01:CDS 40.0%
GAAGATAACCTCTGTGTTGT+TGG + Chr7:58719611-58719630 MsG0780039151.01.T01:CDS 40.0%
GCATAAGAAGTTTCACGGTA+AGG - Chr7:58719369-58719388 None:intergenic 40.0%
GCCAACTATTTGTGTGCTTA+TGG + Chr7:58720108-58720127 MsG0780039151.01.T01:CDS 40.0%
GCGATCATCTCACTTGATTT+GGG + Chr7:58720025-58720044 MsG0780039151.01.T01:CDS 40.0%
TACAATAGTTGTCGTGGTCT+TGG + Chr7:58719911-58719930 MsG0780039151.01.T01:CDS 40.0%
TGAACATCACTGCAGATTGA+CGG + Chr7:58719589-58719608 MsG0780039151.01.T01:intron 40.0%
TGCGATCATCTCACTTGATT+TGG + Chr7:58720024-58720043 MsG0780039151.01.T01:CDS 40.0%
TTGTTCAGCATCATGTCGTT+GGG + Chr7:58720294-58720313 MsG0780039151.01.T01:CDS 40.0%
TTTGTTCAGCATCATGTCGT+TGG + Chr7:58720293-58720312 MsG0780039151.01.T01:CDS 40.0%
! AAAAACCCGCCTTTTTCCTT+TGG - Chr7:58720437-58720456 None:intergenic 40.0%
! AACAAAATTGGTGGTTCCCA+TGG - Chr7:58720164-58720183 None:intergenic 40.0%
! CGATCATCTCACTTGATTTG+GGG + Chr7:58720026-58720045 MsG0780039151.01.T01:CDS 40.0%
! GATAGTTTGGTTTCGACGAA+TGG + Chr7:58720472-58720491 MsG0780039151.01.T01:CDS 40.0%
!! AATGGTTTGGTTTGCTTGCT+TGG + Chr7:58719641-58719660 MsG0780039151.01.T01:CDS 40.0%
AGTTCATCGGGGAGAATTAC+CGG - Chr7:58719325-58719344 None:intergenic 45.0%
ATGTTGGCAAACCGTAGAGT+AGG + Chr7:58720358-58720377 MsG0780039151.01.T01:CDS 45.0%
ATTTCTATAACCCGGCCACA+AGG + Chr7:58719690-58719709 MsG0780039151.01.T01:CDS 45.0%
CAAGCAAACCAAACCATTGC+AGG - Chr7:58719639-58719658 None:intergenic 45.0%
CAATTGGAGGACTAATACGG+TGG + Chr7:58720396-58720415 MsG0780039151.01.T01:CDS 45.0%
CACTTCATCAGAACCTTGAG+GGG - Chr7:58720077-58720096 None:intergenic 45.0%
CTTCACAGACAAGTTCATCG+GGG - Chr7:58719336-58719355 None:intergenic 45.0%
GAGCGGAACTCTTAATTGGT+TGG + Chr7:58719946-58719965 MsG0780039151.01.T01:CDS 45.0%
GCAGTGATGTTCATCCACAT+GGG - Chr7:58719582-58719601 None:intergenic 45.0%
GTTCTCCACTAAACCACGAA+CGG - Chr7:58719549-58719568 None:intergenic 45.0%
GTTGGCTACAATAGTTGTCG+TGG + Chr7:58719905-58719924 MsG0780039151.01.T01:CDS 45.0%
TCATCCACATGGGTGATCAA+CGG - Chr7:58719572-58719591 None:intergenic 45.0%
TGCAGTGATGTTCATCCACA+TGG - Chr7:58719583-58719602 None:intergenic 45.0%
TTCTCCACTAAACCACGAAC+GGG - Chr7:58719548-58719567 None:intergenic 45.0%
! AATAGTTGTCGTGGTCTTGG+TGG + Chr7:58719914-58719933 MsG0780039151.01.T01:CDS 45.0%
!! CTTGGTGGTGTGTATTTGAG+CGG + Chr7:58719929-58719948 MsG0780039151.01.T01:CDS 45.0%
!! TGTGTTGTTGGTTCCTGCAA+TGG + Chr7:58719623-58719642 MsG0780039151.01.T01:CDS 45.0%
!! TGTTGGTTCCTGCAATGGTT+TGG + Chr7:58719628-58719647 MsG0780039151.01.T01:CDS 45.0%
ATGACAGTTGCGCAAGGGAT+CGG - Chr7:58719297-58719316 None:intergenic 50.0%
CATCCACATGGGTGATCAAC+GGG - Chr7:58719571-58719590 None:intergenic 50.0%
TCAGGTGCGTTTGCAAGTCA+TGG + Chr7:58719392-58719411 MsG0780039151.01.T01:intron 50.0%
TCCGATACTTTCCTTGTGGC+CGG - Chr7:58719704-58719723 None:intergenic 50.0%
TGCAGGAACCAACAACACAG+AGG - Chr7:58719622-58719641 None:intergenic 50.0%
TGGAGATGACAGTTGCGCAA+GGG - Chr7:58719302-58719321 None:intergenic 50.0%
CCGATACTTTCCTTGTGGCC+GGG - Chr7:58719703-58719722 None:intergenic 55.0%
GAACCCGTTGATCACCCATG+TGG + Chr7:58719565-58719584 MsG0780039151.01.T01:intron 55.0%
GTCAATTCTTGGCCCGTTCG+TGG + Chr7:58719533-58719552 MsG0780039151.01.T01:intron 55.0%
GTGGAGATGACAGTTGCGCA+AGG - Chr7:58719303-58719322 None:intergenic 55.0%
TCATCGGGGAGAATTACCGG+TGG - Chr7:58719322-58719341 None:intergenic 55.0%
TGCGCAACTGTCATCTCCAC+CGG + Chr7:58719303-58719322 MsG0780039151.01.T01:CDS 55.0%
TTGGCCCGTTCGTGGTTTAG+TGG + Chr7:58719541-58719560 MsG0780039151.01.T01:intron 55.0%
! ACACAATTGGTGGCCCCTCA+AGG + Chr7:58720061-58720080 MsG0780039151.01.T01:CDS 55.0%
! CCCGGCCACAAGGAAAGTAT+CGG + Chr7:58719700-58719719 MsG0780039151.01.T01:CDS 55.0%
GATCGGCGTCGTGACTTAGC+TGG - Chr7:58719280-58719299 None:intergenic 60.0%
GGCGTCGTGACTTAGCTGGA+GGG - Chr7:58719276-58719295 None:intergenic 60.0%
CGGCGTCGTGACTTAGCTGG+AGG - Chr7:58719277-58719296 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 58719265 58720501 58719265 ID=MsG0780039151.01;Name=MsG0780039151.01
Chr7 mRNA 58719265 58720501 58719265 ID=MsG0780039151.01.T01;Parent=MsG0780039151.01;Name=MsG0780039151.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|342
Chr7 exon 58719265 58719395 58719265 ID=MsG0780039151.01.T01:exon:6846;Parent=MsG0780039151.01.T01
Chr7 exon 58719604 58720501 58719604 ID=MsG0780039151.01.T01:exon:6847;Parent=MsG0780039151.01.T01
Chr7 CDS 58719265 58719395 58719265 ID=MsG0780039151.01.T01:cds;Parent=MsG0780039151.01.T01
Chr7 CDS 58719604 58720501 58719604 ID=MsG0780039151.01.T01:cds;Parent=MsG0780039151.01.T01
Gene Sequence

>MsG0780039151.01.T01

ATGAATATCCCTCCAGCTAAGTCACGACGCCGATCCCTTGCGCAACTGTCATCTCCACCGGTAATTCTCCCCGATGAACTTGTCTGTGAAGTGTTATCATTCCTTACCGTGAAACTTCTTATGCGATTCAGATTGACGGAAGATAACCTCTGTGTTGTTGGTTCCTGCAATGGTTTGGTTTGCTTGCTTGGTTTTAATCAATTAGAAAATTGGTTTTATTTCTATAACCCGGCCACAAGGAAAGTATCGGAAAAATTAGGGTCTTTTACAAGGACCAATAGATCAAAGATTGCATTTGGTTTTGATAATTCAACGGACACATATAAGGTTGTGGAGTTTTGTGAAATGAGTAGAGATGTGAGAGTTTTTAGTTTGGGTAATAATATTTGGAGAAATATTCAAAGTTTTCCCGATGTTTTTATTCCCTTTAAAGTTGGCTACAATAGTTGTCGTGGTCTTGGTGGTGTGTATTTGAGCGGAACTCTTAATTGGTTGGTCTTTCGAAATGATATTATATACGATGATTCGAAGAATAGGAAGTTTGAGCATTATGCGATCATCTCACTTGATTTGGGGATAGAGACATACACACAATTGGTGGCCCCTCAAGGTTCTGATGAAGTGTTGTTGAATGAGCCAACTATTTGTGTGCTTATGGATTGCCTTTGTTTTTGTCATCTTAACTTTTCCATGGGAACCACCAATTTTGTTTTATGGAAGATGAAGAACTTTGGAGTTGAAAAATCTTGGAGTCAATTTCTTAACGTTAGTAATGATAATCTTCAAATAAGGTCGAGTCAATTTCGTAAGTTTAATGAATTTTGTTCAGCATCATGTCGTTGGGTGTTCCCATTATTGTGTCATTCTGAGAACGGTGATACATTGATGTTGGCAAACCGTAGAGTAGGACAACTAATTCTCTACAATTGGAGGACTAATACGGTGGAGCGAATTATAACTACCAAAGGAAAAAGGCGGGTTTTTTTCAATAATTACGTTGATAGTTTGGTTTCGACGAATGGAAAGTAA
Protein sequence

>MsG0780039151.01.T01

MNIPPAKSRRRSLAQLSSPPVILPDELVCEVLSFLTVKLLMRFRLTEDNLCVVGSCNGLVCLLGFNQLENWFYFYNPATRKVSEKLGSFTRTNRSKIAFGFDNSTDTYKVVEFCEMSRDVRVFSLGNNIWRNIQSFPDVFIPFKVGYNSCRGLGGVYLSGTLNWLVFRNDIIYDDSKNRKFEHYAIISLDLGIETYTQLVAPQGSDEVLLNEPTICVLMDCLCFCHLNFSMGTTNFVLWKMKNFGVEKSWSQFLNVSNDNLQIRSSQFRKFNEFCSASCRWVFPLLCHSENGDTLMLANRRVGQLILYNWRTNTVERIITTKGKRRVFFNNYVDSLVSTNGK*