AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019405.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019405.01.T01 MTR_4g031020 91.841 429 35 0 1 429 1 429 0.0 815
MsG0480019405.01.T01 MTR_4g030980 89.977 429 43 0 1 429 1 429 0.0 803
MsG0480019405.01.T01 MTR_3g464470 63.333 420 114 5 9 428 1 380 0.0 517
MsG0480019405.01.T01 MTR_3g464500 63.095 420 118 5 9 428 21 403 6.14e-178 503
MsG0480019405.01.T01 MTR_4g019990 53.333 420 164 5 10 428 1 389 1.54e-140 407
MsG0480019405.01.T01 MTR_4g030110 53.555 422 138 10 1 416 16 385 1.82e-140 407
MsG0480019405.01.T01 MTR_4g030830 52.235 425 161 12 12 429 6 395 2.84e-131 384
MsG0480019405.01.T01 MTR_4g030090 48.864 440 175 13 1 429 1 401 4.54e-126 371
MsG0480019405.01.T01 MTR_4g024890 49.065 428 168 12 8 429 3 386 2.11e-125 369
MsG0480019405.01.T01 MTR_6g055210 45.133 452 189 13 1 429 6 421 6.87e-111 333
MsG0480019405.01.T01 MTR_2g461450 46.506 415 155 10 2 411 5 357 2.70e-106 318
MsG0480019405.01.T01 MTR_4g030760 46.809 423 156 14 14 429 72 432 4.64e-104 315
MsG0480019405.01.T01 MTR_8g101940 47.743 421 161 15 14 428 1 368 5.05e-103 311
MsG0480019405.01.T01 MTR_8g066440 41.492 429 191 11 11 426 19 400 6.58e-102 309
MsG0480019405.01.T01 MTR_6g016285 43.379 438 188 11 14 429 20 419 2.66e-101 309
MsG0480019405.01.T01 MTR_5g056020 42.759 435 200 8 14 428 16 421 3.05e-99 305
MsG0480019405.01.T01 MTR_7g055930 42.511 454 182 13 14 428 12 425 3.81e-99 303
MsG0480019405.01.T01 MTR_2g043410 42.105 437 197 14 11 428 18 417 2.28e-98 300
MsG0480019405.01.T01 MTR_1g112010 45.823 395 142 10 37 429 2 326 8.93e-98 296
MsG0480019405.01.T01 MTR_7g055870 41.463 451 191 12 14 428 12 425 5.02e-97 297
MsG0480019405.01.T01 MTR_3g080370 44.811 424 172 12 29 429 35 419 1.11e-96 297
MsG0480019405.01.T01 MTR_7g091630 40.547 439 193 13 15 426 32 429 2.83e-92 285
MsG0480019405.01.T01 MTR_7g056003 42.534 442 188 16 10 428 10 408 2.85e-92 285
MsG0480019405.01.T01 MTR_7g057270 39.294 425 209 10 14 426 25 412 1.24e-91 283
MsG0480019405.01.T01 MTR_0707s0020 41.324 438 214 14 15 428 26 444 3.12e-90 280
MsG0480019405.01.T01 MTR_7g060940 42.824 432 174 18 11 426 18 392 3.17e-90 279
MsG0480019405.01.T01 MTR_7g056503 39.675 431 198 13 11 428 17 398 3.16e-89 276
MsG0480019405.01.T01 MTR_2g043400 40.547 439 201 16 11 428 19 418 1.18e-88 276
MsG0480019405.01.T01 MTR_7g056290 41.531 431 206 15 14 428 21 421 6.46e-88 274
MsG0480019405.01.T01 MTR_7g052150 39.813 427 206 13 11 429 18 401 8.14e-88 273
MsG0480019405.01.T01 MTR_7g061050 40.047 422 197 12 12 426 10 382 1.55e-87 271
MsG0480019405.01.T01 MTR_7g056390 41.492 429 205 14 14 426 17 415 3.05e-87 272
MsG0480019405.01.T01 MTR_0464s0020 42.299 435 204 15 14 428 22 429 3.23e-87 272
MsG0480019405.01.T01 MTR_7g070830 40.363 441 198 12 15 429 21 422 9.82e-87 271
MsG0480019405.01.T01 MTR_7g066100 41.014 434 182 12 15 426 11 392 1.69e-86 269
MsG0480019405.01.T01 MTR_7g056200 38.584 438 195 11 1 428 9 382 4.16e-86 268
MsG0480019405.01.T01 MTR_7g070880 40.136 441 199 12 15 429 21 422 1.34e-85 268
MsG0480019405.01.T01 MTR_3g437520 42.787 409 195 14 14 408 22 405 2.12e-85 269
MsG0480019405.01.T01 MTR_6g086920 39.955 448 220 15 15 428 38 470 2.35e-85 270
MsG0480019405.01.T01 MTR_7g066000 40.323 434 186 13 15 429 25 404 4.78e-85 266
MsG0480019405.01.T01 MTR_0128s0010 37.442 430 227 9 2 428 8 398 3.40e-84 263
MsG0480019405.01.T01 MTR_5g069760 38.588 425 196 12 10 426 1 368 1.26e-82 258
MsG0480019405.01.T01 MTR_0128s0020 38.409 440 210 13 2 429 5 395 1.76e-82 259
MsG0480019405.01.T01 MTR_7g066030 40.909 440 188 14 8 426 13 401 3.79e-82 258
MsG0480019405.01.T01 MTR_3g072470 39.955 443 198 16 13 428 17 418 8.58e-82 258
MsG0480019405.01.T01 MTR_2g047892 41.121 428 194 12 11 428 18 397 9.43e-82 257
MsG0480019405.01.T01 MTR_4g011660 38.137 451 193 12 14 428 18 418 1.38e-81 257
MsG0480019405.01.T01 MTR_6g092560 38.605 430 205 12 14 428 11 396 1.97e-81 258
MsG0480019405.01.T01 MTR_7g028660 38.389 422 195 11 15 426 11 377 3.39e-81 255
MsG0480019405.01.T01 MTR_1g088120 39.261 433 205 18 17 426 12 409 7.62e-81 255
MsG0480019405.01.T01 MTR_7g050480 38.915 424 190 13 15 426 22 388 8.18e-81 254
MsG0480019405.01.T01 MTR_0649s0020 37.931 435 204 13 7 426 3 386 1.26e-80 254
MsG0480019405.01.T01 MTR_7g050520 39.151 424 189 13 15 426 22 388 1.38e-80 254
MsG0480019405.01.T01 MTR_7g078840 37.336 458 214 13 10 426 5 430 6.38e-80 253
MsG0480019405.01.T01 MTR_7g061060 38.119 404 200 10 12 409 10 369 1.69e-79 251
MsG0480019405.01.T01 MTR_0128s0070 38.391 435 212 13 1 426 8 395 1.96e-79 251
MsG0480019405.01.T01 MTR_2g010920 36.142 451 228 13 2 426 7 423 2.05e-79 252
MsG0480019405.01.T01 MTR_2g010950 36.574 432 224 13 6 426 11 403 3.83e-79 251
MsG0480019405.01.T01 MTR_5g043160 39.443 431 218 13 17 428 52 458 4.69e-79 252
MsG0480019405.01.T01 MTR_7g056710 38.407 427 201 13 6 426 9 379 8.25e-79 249
MsG0480019405.01.T01 MTR_7g062060 38.018 434 216 12 7 426 4 398 9.00e-79 249
MsG0480019405.01.T01 MTR_1g442850 38.152 422 195 15 17 426 7 374 1.63e-78 248
MsG0480019405.01.T01 MTR_4g013180 38.765 405 196 10 15 409 11 373 2.04e-78 251
MsG0480019405.01.T01 MTR_4g006350 39.524 420 208 11 14 426 493 873 2.29e-78 260
MsG0480019405.01.T01 MTR_7g077070 38.803 451 209 16 10 426 11 428 2.88e-78 249
MsG0480019405.01.T01 MTR_7g022600 37.162 444 223 16 6 428 14 422 2.89e-78 249
MsG0480019405.01.T01 MTR_7g055987 41.333 375 158 14 13 382 18 335 4.99e-78 246
MsG0480019405.01.T01 MTR_4g033495 37.002 427 212 10 10 425 22 402 1.58e-77 248
MsG0480019405.01.T01 MTR_7g062100 40.185 433 201 15 2 426 13 395 2.15e-77 246
MsG0480019405.01.T01 MTR_7g078900 36.404 445 211 14 17 426 14 421 2.37e-77 246
MsG0480019405.01.T01 MTR_0242s0060 36.383 459 206 15 10 427 4 417 2.43e-77 246
MsG0480019405.01.T01 MTR_0242s0040 36.383 459 206 15 10 427 4 417 2.43e-77 246
MsG0480019405.01.T01 MTR_5g096710 37.019 416 223 8 14 428 22 399 2.48e-77 246
MsG0480019405.01.T01 MTR_7g061090 38.152 422 212 11 15 426 22 404 4.90e-77 245
MsG0480019405.01.T01 MTR_2g047200 39.059 425 206 16 11 428 16 394 1.56e-76 243
MsG0480019405.01.T01 MTR_7g077970 36.264 455 206 15 15 426 7 420 1.88e-76 244
MsG0480019405.01.T01 MTR_6g017280 39.394 429 198 15 14 428 8 388 2.25e-76 243
MsG0480019405.01.T01 MTR_0097s0030 37.443 438 201 13 8 428 7 388 7.57e-76 241
MsG0480019405.01.T01 MTR_2g047240 37.443 438 201 13 8 428 7 388 7.57e-76 241
MsG0480019405.01.T01 MTR_7g078040 36.481 466 209 17 10 426 4 431 2.00e-75 242
MsG0480019405.01.T01 MTR_4g013185 37.004 454 213 15 11 426 6 424 4.38e-75 241
MsG0480019405.01.T01 MTR_7g055977 36.855 407 205 13 15 414 7 368 2.72e-74 237
MsG0480019405.01.T01 MTR_4g013175 38.031 447 206 15 17 426 12 424 5.00e-74 238
MsG0480019405.01.T01 MTR_7g077990 37.559 426 200 16 14 424 16 390 6.61e-74 237
MsG0480019405.01.T01 MTR_7g056737 40.099 404 186 13 15 414 22 373 1.24e-73 236
MsG0480019405.01.T01 MTR_7g079160 36.279 430 207 17 15 410 8 404 3.87e-73 237
MsG0480019405.01.T01 MTR_7g091640 40.678 354 163 10 15 360 35 349 8.40e-73 233
MsG0480019405.01.T01 MTR_5g068040 36.977 430 199 13 10 427 11 380 1.27e-72 233
MsG0480019405.01.T01 MTR_7g060960 38.902 419 167 15 14 426 31 366 1.35e-72 233
MsG0480019405.01.T01 MTR_1g071010 36.569 443 210 14 1 428 1 387 1.68e-72 233
MsG0480019405.01.T01 MTR_7g066010 39.101 445 156 18 8 426 13 368 1.68e-72 232
MsG0480019405.01.T01 MTR_7g056717 39.089 417 197 13 17 429 24 387 1.70e-72 233
MsG0480019405.01.T01 MTR_7g066080 37.416 449 205 17 11 428 12 415 1.90e-72 234
MsG0480019405.01.T01 MTR_7g066060 37.674 430 211 13 13 428 21 407 4.27e-72 236
MsG0480019405.01.T01 MTR_4g129190 37.123 431 210 16 15 429 6 391 1.28e-71 231
MsG0480019405.01.T01 MTR_2g006360 37.300 437 152 14 4 426 33 361 3.76e-71 229
MsG0480019405.01.T01 MTR_7g009265 43.505 331 160 9 110 426 5 322 3.84e-71 227
MsG0480019405.01.T01 MTR_7g055830 44.371 302 120 7 161 428 70 357 4.67e-71 228
MsG0480019405.01.T01 MTR_7g445890 36.636 434 191 14 14 428 15 383 6.61e-71 229
MsG0480019405.01.T01 MTR_6g088385 47.653 277 124 7 163 428 53 319 5.83e-70 224
MsG0480019405.01.T01 MTR_7g061010 38.626 422 200 11 11 426 18 386 5.92e-69 224
MsG0480019405.01.T01 MTR_5g069930 34.813 428 205 14 15 426 6 375 4.94e-68 221
MsG0480019405.01.T01 MTR_7g078860 37.046 413 208 16 11 409 5 379 7.93e-68 221
MsG0480019405.01.T01 MTR_7g035295 36.343 443 194 14 6 428 6 380 1.09e-67 221
MsG0480019405.01.T01 MTR_6g017305 45.652 276 124 7 168 428 18 282 2.99e-67 216
MsG0480019405.01.T01 MTR_7g056170 36.522 460 172 14 15 428 75 460 3.72e-67 221
MsG0480019405.01.T01 MTR_7g052670 38.739 444 203 18 15 428 21 425 1.32e-66 219
MsG0480019405.01.T01 MTR_7g056570 36.235 425 215 11 6 426 9 381 2.06e-66 218
MsG0480019405.01.T01 MTR_7g056260 39.889 361 142 14 14 355 13 317 3.18e-66 214
MsG0480019405.01.T01 MTR_7g056760 35.388 438 222 14 6 428 14 405 5.13e-66 216
MsG0480019405.01.T01 MTR_1g015730 36.889 450 193 18 10 427 4 394 6.09e-66 216
MsG0480019405.01.T01 MTR_7g066850 35.664 429 217 13 14 428 22 405 7.25e-65 215
MsG0480019405.01.T01 MTR_7g056820 33.882 425 228 12 9 429 1 376 1.83e-64 212
MsG0480019405.01.T01 MTR_7g113500 39.048 315 165 8 124 426 81 380 2.67e-64 211
MsG0480019405.01.T01 MTR_7g066840 34.742 426 222 12 12 428 20 398 4.26e-64 211
MsG0480019405.01.T01 MTR_4g008790 36.905 420 194 12 17 409 41 416 2.48e-63 211
MsG0480019405.01.T01 MTR_4g024870 46.021 289 115 9 16 299 45 297 6.85e-63 209
MsG0480019405.01.T01 MTR_1g029650 35.056 445 216 17 11 427 4 403 3.74e-62 206
MsG0480019405.01.T01 MTR_2g047878 36.659 431 177 16 11 428 17 364 3.86e-62 205
MsG0480019405.01.T01 MTR_7g022670 34.107 431 183 14 6 428 14 351 6.63e-62 204
MsG0480019405.01.T01 MTR_4g030790 48.069 233 107 7 131 361 70 290 8.11e-62 204
MsG0480019405.01.T01 MTR_4g030790 63.462 52 19 0 14 65 18 69 3.80e-15 76.6
MsG0480019405.01.T01 MTR_4g020000 50.885 226 101 4 187 411 111 327 1.18e-61 204
MsG0480019405.01.T01 MTR_4g037465 34.279 423 224 14 11 426 17 392 7.95e-61 203
MsG0480019405.01.T01 MTR_7g056797 35.388 438 226 16 2 428 12 403 9.13e-61 203
MsG0480019405.01.T01 MTR_1g047490 37.784 352 136 9 15 353 22 303 3.18e-60 199
MsG0480019405.01.T01 MTR_7g077910 41.066 319 147 12 129 426 36 334 3.26e-60 199
MsG0480019405.01.T01 MTR_4g034860 35.101 396 194 14 38 411 45 399 3.55e-60 201
MsG0480019405.01.T01 MTR_2g010900 34.324 370 193 12 33 390 1 332 4.72e-60 200
MsG0480019405.01.T01 MTR_7g056173 44.015 259 113 6 188 429 26 269 7.61e-60 198
MsG0480019405.01.T01 MTR_7g445750 35.593 354 167 10 11 344 19 331 2.26e-57 192
MsG0480019405.01.T01 MTR_6g017295 40.303 330 151 12 110 408 15 329 4.12e-57 197
MsG0480019405.01.T01 MTR_6g065510 41.786 280 131 10 160 426 69 329 1.20e-56 190
MsG0480019405.01.T01 MTR_5g058620 41.923 260 125 7 187 428 31 282 5.87e-56 186
MsG0480019405.01.T01 MTR_1g058870 41.923 260 125 7 187 428 31 282 5.87e-56 186
MsG0480019405.01.T01 MTR_1g015740 30.626 431 179 10 10 427 3 326 1.11e-55 187
MsG0480019405.01.T01 MTR_2g437110 35.632 435 198 16 14 428 21 393 2.35e-55 191
MsG0480019405.01.T01 MTR_4g129160 36.641 393 194 17 12 385 4 360 2.47e-55 187
MsG0480019405.01.T01 MTR_3g013470 32.151 423 215 13 21 422 1 372 1.87e-53 182
MsG0480019405.01.T01 MTR_2g017720 48.052 231 91 8 199 423 89 296 2.01e-53 184
MsG0480019405.01.T01 MTR_7g070440 32.867 429 214 14 12 427 4 371 8.45e-53 181
MsG0480019405.01.T01 MTR_7g055953 43.145 248 115 8 185 426 86 313 1.01e-52 179
MsG0480019405.01.T01 MTR_2g047895 37.874 301 140 10 137 422 37 305 3.43e-51 176
MsG0480019405.01.T01 MTR_0267s0050 32.394 426 228 15 13 426 5 382 5.74e-51 177
MsG0480019405.01.T01 MTR_8g030630 43.191 257 124 6 179 429 21 261 2.25e-50 176
MsG0480019405.01.T01 MTR_8g030630 42.487 193 84 2 211 403 273 438 1.44e-36 139
MsG0480019405.01.T01 MTR_7g091610 47.541 183 90 4 249 428 69 248 2.62e-49 168
MsG0480019405.01.T01 MTR_3g013950 31.555 431 234 16 10 426 1 384 1.44e-48 170
MsG0480019405.01.T01 MTR_7g078940 38.485 330 143 13 14 314 31 329 2.50e-48 170
MsG0480019405.01.T01 MTR_2g021150 33.095 420 207 16 15 426 14 367 1.28e-46 164
MsG0480019405.01.T01 MTR_6g017270 31.382 427 188 14 14 428 8 341 7.30e-46 162
MsG0480019405.01.T01 MTR_7g066040 48.603 179 72 5 137 301 25 197 1.56e-45 158
MsG0480019405.01.T01 MTR_6g081280 37.849 251 134 5 179 426 8 239 1.14e-44 155
MsG0480019405.01.T01 MTR_7g034310 41.564 243 114 5 184 426 12 226 7.77e-44 153
MsG0480019405.01.T01 MTR_7g078960 36.519 293 132 10 163 426 18 285 1.56e-43 154
MsG0480019405.01.T01 MTR_2g027820 48.619 181 85 3 249 426 124 299 4.05e-43 153
MsG0480019405.01.T01 MTR_1g094210 29.847 392 204 12 11 397 53 378 1.26e-42 155
MsG0480019405.01.T01 MTR_1g097490 30.628 382 188 10 8 385 43 351 1.76e-42 154
MsG0480019405.01.T01 MTR_1g097330 30.562 409 201 15 14 412 15 350 5.05e-42 153
MsG0480019405.01.T01 MTR_2g046920 31.127 408 194 17 9 403 18 351 5.61e-42 152
MsG0480019405.01.T01 MTR_1g094210 30.601 366 185 11 11 373 53 352 7.87e-42 153
MsG0480019405.01.T01 MTR_1g097560 30.556 396 183 17 1 385 18 332 1.42e-41 151
MsG0480019405.01.T01 MTR_2g010935 37.975 237 112 5 194 426 43 248 1.45e-41 148
MsG0480019405.01.T01 MTR_4g006840 39.643 280 104 9 18 296 2 217 2.06e-41 147
MsG0480019405.01.T01 MTR_2g046800 32.213 357 191 12 14 357 13 331 7.29e-41 150
MsG0480019405.01.T01 MTR_7g061100 36.486 296 112 11 12 307 10 229 3.52e-40 146
MsG0480019405.01.T01 MTR_1g054575 31.714 350 170 10 14 358 51 336 1.01e-39 151
MsG0480019405.01.T01 MTR_7g037670 31.640 433 177 18 2 426 10 331 5.69e-39 143
MsG0480019405.01.T01 MTR_7g056023 32.927 328 128 12 15 334 30 273 6.52e-39 141
MsG0480019405.01.T01 MTR_1g050542 31.549 355 162 13 14 358 57 340 3.19e-38 143
MsG0480019405.01.T01 MTR_2g046900 30.709 381 200 13 12 385 25 348 5.44e-38 142
MsG0480019405.01.T01 MTR_2g021252 30.404 421 194 19 18 426 50 383 1.60e-37 140
MsG0480019405.01.T01 MTR_2g047832 29.647 425 216 17 2 403 12 376 1.60e-37 141
MsG0480019405.01.T01 MTR_7g070900 45.745 188 66 4 175 359 223 377 2.07e-37 142
MsG0480019405.01.T01 MTR_6g042600 39.189 222 113 5 224 427 107 324 2.83e-37 140
MsG0480019405.01.T01 MTR_5g011350 41.704 223 95 9 117 334 54 246 3.00e-37 136
MsG0480019405.01.T01 MTR_7g058630 41.860 172 92 1 257 428 17 180 4.31e-37 134
MsG0480019405.01.T01 MTR_2g046830 29.665 418 205 14 12 408 22 371 4.62e-37 140
MsG0480019405.01.T01 MTR_8g467140 32.070 343 166 14 15 350 32 314 6.06e-37 137
MsG0480019405.01.T01 MTR_7g070937 55.970 134 53 3 187 317 10 140 9.12e-37 132
MsG0480019405.01.T01 MTR_8g101580 30.244 410 202 16 15 413 45 381 1.46e-35 135
MsG0480019405.01.T01 MTR_7g030040 31.280 422 143 18 14 428 56 337 3.58e-35 133
MsG0480019405.01.T01 MTR_4g024910 41.624 197 81 7 33 228 1 164 5.94e-35 132
MsG0480019405.01.T01 MTR_4g024910 51.240 121 58 1 307 426 144 264 3.01e-34 130
MsG0480019405.01.T01 MTR_4g061340 29.742 427 207 17 15 426 26 374 1.15e-34 132
MsG0480019405.01.T01 MTR_2g029990 29.216 421 217 18 16 426 52 401 1.27e-34 133
MsG0480019405.01.T01 MTR_4g128320 35.039 254 126 7 163 410 41 261 2.13e-34 129
MsG0480019405.01.T01 MTR_2g021190 29.953 424 214 16 14 426 20 371 2.27e-34 132
MsG0480019405.01.T01 MTR_7g061940 38.095 210 106 7 191 398 79 266 2.32e-34 129
MsG0480019405.01.T01 MTR_5g022420 29.620 395 198 17 15 404 27 346 7.38e-34 130
MsG0480019405.01.T01 MTR_2g055970 30.205 341 175 11 15 350 211 493 5.42e-33 131
MsG0480019405.01.T01 MTR_3g009240 32.361 377 163 18 15 376 36 335 2.39e-32 126
MsG0480019405.01.T01 MTR_4g030880 39.256 242 95 9 175 414 11 202 3.05e-32 128
MsG0480019405.01.T01 MTR_3g007360 29.723 397 204 17 18 405 55 385 4.81e-32 126
MsG0480019405.01.T01 MTR_0128s0110 39.130 184 102 4 249 429 29 205 9.59e-32 120
MsG0480019405.01.T01 MTR_3g007330 30.086 349 169 11 15 355 48 329 1.68e-31 124
MsG0480019405.01.T01 MTR_5g069950 32.195 205 99 6 160 358 30 200 2.85e-31 119
MsG0480019405.01.T01 MTR_7g078880 30.323 310 158 10 140 424 35 311 3.56e-31 123
MsG0480019405.01.T01 MTR_3g007410 29.723 397 204 17 18 405 55 385 5.46e-31 123
MsG0480019405.01.T01 MTR_4g107820 27.966 354 182 11 15 360 36 324 5.61e-31 122
MsG0480019405.01.T01 MTR_4g107780 27.966 354 182 11 15 360 36 324 5.61e-31 122
MsG0480019405.01.T01 MTR_4g107820 27.966 354 182 11 15 360 36 324 7.33e-31 123
MsG0480019405.01.T01 MTR_4g107780 27.966 354 182 11 15 360 36 324 7.55e-31 123
MsG0480019405.01.T01 MTR_4g031770 29.954 434 212 19 15 426 4 367 8.46e-31 122
MsG0480019405.01.T01 MTR_5g057690 29.240 342 176 11 15 355 46 322 6.95e-30 119
MsG0480019405.01.T01 MTR_3g055000 41.007 139 67 3 289 426 1 125 3.09e-29 111
MsG0480019405.01.T01 MTR_7g056793 32.653 245 106 7 184 426 43 230 3.13e-29 114
MsG0480019405.01.T01 MTR_2g060555 32.364 275 124 11 163 417 45 277 3.70e-29 115
MsG0480019405.01.T01 MTR_3g036290 31.339 351 158 14 12 354 19 294 3.99e-29 117
MsG0480019405.01.T01 MTR_3g009260 31.458 391 180 17 18 391 44 363 4.96e-29 117
MsG0480019405.01.T01 MTR_3g011100 30.682 352 174 13 15 355 235 527 8.36e-29 119
MsG0480019405.01.T01 MTR_5g057710 30.172 348 175 14 15 355 46 332 1.37e-28 116
MsG0480019405.01.T01 MTR_5g011200 30.141 355 178 20 9 353 11 305 4.54e-28 114
MsG0480019405.01.T01 MTR_1g054725 27.792 403 213 18 15 401 20 360 1.35e-27 113
MsG0480019405.01.T01 MTR_6g007135 29.953 424 228 19 13 426 24 388 1.46e-27 113
MsG0480019405.01.T01 MTR_7g407070 28.678 401 200 15 14 381 31 378 3.29e-27 112
MsG0480019405.01.T01 MTR_5g057020 29.086 361 175 15 15 368 46 332 4.40e-27 111
MsG0480019405.01.T01 MTR_6g065980 29.532 342 167 10 15 353 16 286 5.69e-27 111
MsG0480019405.01.T01 MTR_3g024040 27.427 412 214 15 22 426 38 371 6.92e-27 111
MsG0480019405.01.T01 MTR_5g057790 29.310 348 178 14 15 355 46 332 9.12e-27 111
MsG0480019405.01.T01 MTR_2g021155 27.229 415 221 14 8 411 26 370 1.16e-26 113
MsG0480019405.01.T01 MTR_2g021155 31.538 260 128 15 166 414 724 944 1.79e-15 79.3
MsG0480019405.01.T01 MTR_2g046860 30.333 300 159 12 133 419 3 265 4.69e-26 107
MsG0480019405.01.T01 MTR_3g024110 29.598 348 169 13 15 355 101 379 4.95e-26 110
MsG0480019405.01.T01 MTR_3g007270 28.678 401 213 15 11 393 43 388 5.10e-26 109
MsG0480019405.01.T01 MTR_3g011020 28.438 429 210 19 7 414 18 370 5.16e-26 108
MsG0480019405.01.T01 MTR_3g006670 26.997 363 188 14 14 363 48 346 5.72e-26 109
MsG0480019405.01.T01 MTR_3g006530 28.312 385 195 14 14 386 39 354 9.13e-26 108
MsG0480019405.01.T01 MTR_3g007430 27.273 407 206 14 18 411 46 375 1.30e-25 107
MsG0480019405.01.T01 MTR_3g036335 28.451 355 173 14 15 355 41 328 1.37e-25 107
MsG0480019405.01.T01 MTR_2g078900 29.598 348 175 13 14 355 32 315 1.53e-25 107
MsG0480019405.01.T01 MTR_8g030660 32.624 282 123 11 9 258 21 267 1.91e-25 105
MsG0480019405.01.T01 MTR_3g083640 26.620 432 235 16 2 426 45 401 2.30e-25 107
MsG0480019405.01.T01 MTR_3g009310 28.389 391 207 13 15 393 42 371 2.30e-25 107
MsG0480019405.01.T01 MTR_1g055375 28.706 425 221 23 18 426 7 365 3.19e-25 106
MsG0480019405.01.T01 MTR_3g013740 30.959 365 166 20 15 356 44 345 5.08e-25 106
MsG0480019405.01.T01 MTR_7g055850 35.211 213 94 6 14 205 12 201 5.41e-25 104
MsG0480019405.01.T01 MTR_7g007300 27.962 422 214 17 15 426 103 444 7.29e-25 106
MsG0480019405.01.T01 MTR_7g013590 27.316 421 224 18 18 425 39 390 8.60e-25 105
MsG0480019405.01.T01 MTR_4g053470 26.440 382 177 11 15 392 22 303 9.00e-25 104
MsG0480019405.01.T01 MTR_6g053260 31.161 353 168 18 15 355 337 626 1.12e-24 107
MsG0480019405.01.T01 MTR_5g046300 25.420 417 235 15 15 426 4 349 1.15e-24 104
MsG0480019405.01.T01 MTR_5g046290 25.420 417 235 15 15 426 4 349 1.15e-24 104
MsG0480019405.01.T01 MTR_7g006360 44.444 126 62 3 303 426 155 274 1.94e-24 102
MsG0480019405.01.T01 MTR_7g006360 54.717 53 24 0 16 68 10 62 2.10e-11 64.7
MsG0480019405.01.T01 MTR_3g011060 28.960 404 198 19 15 393 28 367 2.19e-24 104
MsG0480019405.01.T01 MTR_0760s0010 30.618 356 154 16 20 360 52 329 2.29e-24 104
MsG0480019405.01.T01 MTR_3g014570 29.620 368 170 18 14 363 28 324 3.97e-24 103
MsG0480019405.01.T01 MTR_3g006570 25.229 436 221 18 15 426 21 375 6.79e-24 102
MsG0480019405.01.T01 MTR_3g014540 29.589 365 171 17 8 355 22 317 1.37e-23 102
MsG0480019405.01.T01 MTR_8g062660 29.101 378 159 17 8 353 15 315 1.43e-23 103
MsG0480019405.01.T01 MTR_3g010590 26.724 348 170 12 15 353 39 310 2.74e-23 101
MsG0480019405.01.T01 MTR_2g078850 28.152 341 184 10 18 355 33 315 2.91e-23 100
MsG0480019405.01.T01 MTR_6g048120 28.571 350 188 14 15 355 36 332 6.43e-23 100
MsG0480019405.01.T01 MTR_3g024130 35.193 233 99 12 137 355 58 252 6.66e-23 99.0
MsG0480019405.01.T01 MTR_3g010520 26.492 419 218 16 14 426 24 358 7.21e-23 99.8
MsG0480019405.01.T01 MTR_3g013770 30.252 357 173 17 11 353 29 323 8.23e-23 99.8
MsG0480019405.01.T01 MTR_3g010920 28.842 423 204 19 15 426 44 380 9.65e-23 99.8
MsG0480019405.01.T01 MTR_3g030350 29.429 350 172 14 15 355 35 318 1.08e-22 99.4
MsG0480019405.01.T01 MTR_6g004660 27.059 425 238 18 14 426 15 379 1.18e-22 99.4
MsG0480019405.01.T01 MTR_0044s0300 28.732 355 168 14 15 355 38 321 1.60e-22 99.0
MsG0480019405.01.T01 MTR_3g034130 27.855 359 185 12 15 357 9 309 1.72e-22 98.6
MsG0480019405.01.T01 MTR_0354s0030 51.042 96 42 1 338 428 1 96 1.77e-22 91.7
MsG0480019405.01.T01 MTR_7g050490 31.222 221 110 6 15 233 8 188 1.83e-22 94.7
MsG0480019405.01.T01 MTR_6g053240 28.857 350 185 16 15 355 28 322 4.13e-22 98.2
MsG0480019405.01.T01 MTR_3g010870 26.773 437 207 21 14 426 36 383 6.11e-22 97.4
MsG0480019405.01.T01 MTR_4g055060 27.733 375 198 13 4 365 19 333 7.85e-22 97.1
MsG0480019405.01.T01 MTR_3g034180 28.492 358 182 15 15 356 123 422 1.13e-21 97.4
MsG0480019405.01.T01 MTR_7g067680 26.128 421 209 16 15 426 49 376 1.17e-21 96.7
MsG0480019405.01.T01 MTR_3g030330 28.729 362 171 14 14 362 19 306 1.60e-21 95.9
MsG0480019405.01.T01 MTR_7g089830 37.500 144 63 3 250 387 7 129 2.00e-21 90.5
MsG0480019405.01.T01 MTR_3g436150 27.136 398 202 15 15 381 32 372 2.07e-21 95.9
MsG0480019405.01.T01 MTR_2g028160 25.191 393 227 13 15 390 5 347 2.43e-21 95.9
MsG0480019405.01.T01 MTR_3g010390 29.155 367 187 18 5 354 26 336 2.88e-21 95.5
MsG0480019405.01.T01 MTR_2g021210 27.465 426 217 13 11 426 80 423 4.22e-21 95.1
MsG0480019405.01.T01 MTR_2g028130 25.698 358 210 10 15 358 5 320 4.61e-21 95.1
MsG0480019405.01.T01 MTR_3g009300 31.301 246 127 11 118 355 79 290 5.03e-21 94.4
MsG0480019405.01.T01 MTR_3g024150 27.378 347 173 14 18 353 38 316 5.17e-21 94.7
MsG0480019405.01.T01 MTR_3g036430 25.522 431 205 15 9 426 14 341 9.22e-21 93.2
MsG0480019405.01.T01 MTR_4g133170 22.196 419 221 13 15 411 4 339 9.65e-21 94.0
MsG0480019405.01.T01 MTR_1g055055 27.160 405 199 20 5 400 18 335 1.00e-20 93.2
MsG0480019405.01.T01 MTR_7g445580 43.636 110 57 2 298 407 42 146 1.33e-20 88.2
MsG0480019405.01.T01 MTR_3g055070 38.017 121 59 3 289 408 1 106 1.41e-20 88.6
MsG0480019405.01.T01 MTR_2g028140 27.049 366 201 17 15 358 5 326 1.73e-20 93.6
MsG0480019405.01.T01 MTR_7g060930 51.852 81 36 1 261 341 1 78 2.08e-20 85.5
MsG0480019405.01.T01 MTR_3g030310 26.343 391 207 16 14 390 20 343 2.09e-20 92.8
MsG0480019405.01.T01 MTR_3g034160 27.945 365 188 16 15 363 9 314 2.13e-20 92.8
MsG0480019405.01.T01 MTR_2g079810 27.742 310 161 11 10 311 1 255 2.38e-20 91.3
MsG0480019405.01.T01 MTR_3g006500 24.941 425 235 15 14 426 16 368 3.77e-20 92.0
MsG0480019405.01.T01 MTR_3g030240 28.814 354 170 16 15 362 40 317 4.09e-20 92.0
MsG0480019405.01.T01 MTR_3g010430 24.545 440 220 17 15 426 36 391 4.50e-20 92.0
MsG0480019405.01.T01 MTR_2g021050 24.348 345 191 11 15 353 5 285 4.84e-20 91.7
MsG0480019405.01.T01 MTR_3g030320 32.000 225 107 8 138 355 44 229 5.94e-20 90.1
MsG0480019405.01.T01 MTR_4g023090 25.916 382 198 13 15 384 16 324 6.66e-20 91.3
MsG0480019405.01.T01 MTR_1g068875 22.877 424 243 16 15 427 4 354 7.06e-20 91.3
MsG0480019405.01.T01 MTR_4g070550 25.833 360 197 11 15 353 5 315 7.77e-20 91.3
MsG0480019405.01.T01 MTR_1g055070 23.832 428 219 14 15 426 49 385 8.08e-20 91.3
MsG0480019405.01.T01 MTR_4g021785 25.858 379 203 12 15 389 9 313 8.62e-20 90.5
MsG0480019405.01.T01 MTR_5g046260 22.563 359 181 10 15 369 4 269 9.55e-20 89.7
MsG0480019405.01.T01 MTR_2g426090 24.863 366 209 13 10 359 1 316 1.14e-19 90.9
MsG0480019405.01.T01 MTR_1g068835 22.478 347 212 9 15 358 4 296 1.21e-19 90.5
MsG0480019405.01.T01 MTR_3g010970 28.070 342 168 13 18 353 51 320 1.32e-19 90.5
MsG0480019405.01.T01 MTR_2g078870 30.565 301 159 14 132 426 50 306 1.51e-19 89.4
MsG0480019405.01.T01 MTR_3g058440 29.677 310 161 14 7 311 29 286 1.71e-19 89.0
MsG0480019405.01.T01 MTR_5g007610 28.065 367 185 15 11 359 37 342 1.86e-19 90.1
MsG0480019405.01.T01 MTR_3g058480 30.375 293 150 10 15 302 39 282 1.90e-19 89.4
MsG0480019405.01.T01 MTR_7g078050 36.723 177 67 8 14 189 5 137 1.93e-19 87.8
MsG0480019405.01.T01 MTR_2g426060 25.635 433 240 15 15 427 6 376 2.51e-19 89.7
MsG0480019405.01.T01 MTR_1g068860 21.170 359 204 9 15 358 4 298 3.06e-19 89.4
MsG0480019405.01.T01 MTR_2g031720 25.824 364 185 16 10 353 1 299 3.15e-19 89.4
MsG0480019405.01.T01 MTR_2g025420 24.331 411 233 14 10 395 1 358 3.52e-19 89.7
MsG0480019405.01.T01 MTR_3g007300 27.714 350 150 14 15 355 49 304 4.13e-19 89.0
MsG0480019405.01.T01 MTR_4g108820 30.043 233 120 8 130 358 100 293 4.13e-19 88.2
MsG0480019405.01.T01 MTR_6g048140 28.084 381 199 17 15 385 39 354 5.85e-19 88.6
MsG0480019405.01.T01 MTR_4g116330 24.433 397 225 13 15 406 23 349 6.83e-19 88.2
MsG0480019405.01.T01 MTR_3g058470 28.117 377 180 17 15 385 37 328 7.45e-19 88.2
MsG0480019405.01.T01 MTR_2g043420 40.580 138 58 4 10 147 21 134 9.25e-19 83.6
MsG0480019405.01.T01 MTR_5g009060 29.121 364 199 18 15 359 25 348 4.10e-18 86.3
MsG0480019405.01.T01 MTR_4g023080 27.005 374 194 13 15 384 9 307 4.58e-18 85.5
MsG0480019405.01.T01 MTR_3g030250 26.211 351 172 15 14 353 36 310 7.56e-18 85.1
MsG0480019405.01.T01 MTR_7g021580 26.780 295 142 6 15 300 33 262 7.58e-18 84.0
MsG0480019405.01.T01 MTR_1g097370 31.527 203 115 6 190 389 135 316 8.80e-18 85.9
MsG0480019405.01.T01 MTR_4g053510 36.641 131 58 3 15 145 22 127 1.04e-17 79.3
MsG0480019405.01.T01 MTR_3g023940 27.557 352 177 14 15 353 34 320 1.51e-17 84.3
MsG0480019405.01.T01 MTR_7g058660 31.973 147 89 2 283 423 69 210 1.68e-17 81.3
MsG0480019405.01.T01 MTR_2g426070 23.184 358 216 11 10 353 1 313 2.33e-17 84.0
MsG0480019405.01.T01 MTR_1g055065 27.961 304 168 13 138 426 19 286 2.84e-17 82.0
MsG0480019405.01.T01 MTR_8g099460 23.889 360 206 12 15 361 5 309 3.28e-17 83.6
MsG0480019405.01.T01 MTR_6g004210 27.059 340 205 12 28 358 38 343 4.08e-17 83.2
MsG0480019405.01.T01 MTR_6g460450 36.957 138 64 3 11 148 25 139 4.95e-17 78.2
MsG0480019405.01.T01 MTR_1g100763 26.343 391 179 21 23 402 6 298 6.03e-17 81.3
MsG0480019405.01.T01 MTR_2g426020 24.601 439 237 17 15 427 6 376 8.16e-17 82.4
MsG0480019405.01.T01 MTR_3g103020 25.176 425 230 16 15 426 20 369 9.00e-17 82.0
MsG0480019405.01.T01 MTR_1004s0010 33.333 225 102 11 140 360 119 299 1.98e-16 80.9
MsG0480019405.01.T01 MTR_3g083010 23.056 373 220 13 10 360 1 328 2.01e-16 81.3
MsG0480019405.01.T01 MTR_6g021880 26.442 416 223 20 27 426 32 380 2.85e-16 80.5
MsG0480019405.01.T01 MTR_7g062070 33.628 113 71 2 292 401 75 186 4.71e-16 77.0
MsG0480019405.01.T01 MTR_7g066830 31.795 195 90 8 46 237 26 180 6.04e-16 76.3
MsG0480019405.01.T01 MTR_1g055135 26.891 357 188 13 15 355 13 312 7.40e-16 79.3
MsG0480019405.01.T01 MTR_7g056373 43.119 109 60 2 1 108 8 115 7.91e-16 73.9
MsG0480019405.01.T01 MTR_3g010620 25.641 390 201 15 18 394 39 352 8.55e-16 79.0
MsG0480019405.01.T01 MTR_1g056710 25.114 438 242 18 1 426 24 387 8.89e-16 79.0
MsG0480019405.01.T01 MTR_2g028110 23.446 354 196 11 15 353 4 297 9.58e-16 79.0
MsG0480019405.01.T01 MTR_0667s0010 23.398 359 197 14 15 353 6 306 1.01e-15 79.0
MsG0480019405.01.T01 MTR_2g031680 21.173 392 220 11 10 386 1 318 1.20e-15 78.6
MsG0480019405.01.T01 MTR_5g070080 25.352 426 245 16 15 426 10 376 1.50e-15 78.2
MsG0480019405.01.T01 MTR_3g009250 30.709 254 117 10 18 264 44 245 1.61e-15 76.3
MsG0480019405.01.T01 MTR_3g011650 30.709 254 118 10 18 264 82 284 1.67e-15 77.0
MsG0480019405.01.T01 MTR_8g069515 33.714 175 91 7 6 178 7 158 2.10e-15 74.7
MsG0480019405.01.T01 MTR_4g023070 25.789 380 213 15 15 384 3 323 4.02e-15 77.0
MsG0480019405.01.T01 MTR_2g024110 23.295 352 191 12 15 351 4 291 4.33e-15 77.0
MsG0480019405.01.T01 MTR_4g023120 26.667 375 200 16 15 382 3 309 5.19e-15 76.6
MsG0480019405.01.T01 MTR_5g070130 23.557 433 242 15 11 426 7 367 5.25e-15 76.6
MsG0480019405.01.T01 MTR_1g097510 30.137 219 101 8 167 384 64 231 6.37e-15 75.1
MsG0480019405.01.T01 MTR_3g006640 29.832 238 117 12 138 357 19 224 1.03e-14 74.7
MsG0480019405.01.T01 MTR_1g058190 27.143 280 147 13 170 426 124 369 1.68e-14 75.1
MsG0480019405.01.T01 MTR_5g070380 34.307 137 61 4 43 179 44 151 1.73e-14 72.0
MsG0480019405.01.T01 MTR_8g013010 26.820 261 136 9 15 265 54 269 2.08e-14 74.3
MsG0480019405.01.T01 MTR_2g435950 30.222 225 114 10 137 353 46 235 2.14e-14 73.9
MsG0480019405.01.T01 MTR_1g046600 29.612 206 86 8 38 220 70 239 2.29e-14 73.9
MsG0480019405.01.T01 MTR_6g007150 27.759 299 176 14 137 426 69 336 4.26e-14 73.6
MsG0480019405.01.T01 MTR_7g077930 52.542 59 27 1 14 71 18 76 6.71e-14 67.8
MsG0480019405.01.T01 MTR_5g056990 33.728 169 82 7 190 355 36 177 9.71e-14 70.9
MsG0480019405.01.T01 MTR_3g083660 28.253 269 141 12 167 427 56 280 1.25e-13 71.2
MsG0480019405.01.T01 MTR_2g031640 25.479 365 181 18 10 353 1 295 2.18e-13 71.6
MsG0480019405.01.T01 MTR_1g016960 35.922 103 60 2 331 427 153 255 3.01e-13 69.7
MsG0480019405.01.T01 MTR_3g010450 26.087 299 142 10 22 311 4 232 3.15e-13 69.7
MsG0480019405.01.T01 MTR_7g016930 23.446 354 187 12 15 349 16 304 4.14e-13 70.5
MsG0480019405.01.T01 MTR_8g054320 31.559 263 124 13 141 383 56 282 4.24e-13 70.1
MsG0480019405.01.T01 MTR_6g048150 40.000 95 50 3 335 424 13 105 4.78e-13 66.2
MsG0480019405.01.T01 MTR_1g056280 31.100 209 107 10 199 398 3 183 8.49e-13 67.8
MsG0480019405.01.T01 MTR_4g116330 27.344 256 136 10 15 265 23 233 9.04e-13 69.3
MsG0480019405.01.T01 MTR_0064s0060 34.351 131 62 3 14 144 16 122 1.12e-12 65.5
MsG0480019405.01.T01 MTR_7g061130 43.333 90 47 2 338 426 1 87 1.27e-12 63.9
MsG0480019405.01.T01 MTR_5g057040 28.889 225 115 9 15 234 46 230 1.83e-12 70.1
MsG0480019405.01.T01 MTR_5g096630 26.253 419 218 20 15 403 18 375 2.78e-12 68.6
MsG0480019405.01.T01 MTR_5g087530 72.973 37 10 0 15 51 45 81 4.09e-12 62.4
MsG0480019405.01.T01 MTR_3g009290 32.240 183 92 9 120 296 101 257 5.24e-12 66.2
MsG0480019405.01.T01 MTR_4g089125 41.667 72 42 0 7 78 4 75 7.75e-12 61.6
MsG0480019405.01.T01 MTR_7g056727 35.542 166 69 8 55 212 3 138 2.84e-11 63.5
MsG0480019405.01.T01 MTR_2g026010 22.888 367 182 13 15 353 4 297 4.20e-11 64.7
MsG0480019405.01.T01 MTR_7g017040 25.414 362 199 18 15 351 16 331 5.56e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019405.01.T01 AT3G23880 25.980 408 212 18 8 403 7 336 1.04e-16 81.6
MsG0480019405.01.T01 AT4G12560 23.677 359 195 14 15 353 4 303 1.18e-13 72.8
MsG0480019405.01.T01 AT4G12560 23.677 359 195 14 15 353 4 303 1.18e-13 72.8
MsG0480019405.01.T01 AT4G12560 23.677 359 195 14 15 353 4 303 1.18e-13 72.8

Find 104 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTATTCTGATTATGAAAT+TGG 0.138983 4:-19716384 MsG0480019405.01.T01:CDS
CCTTCGTGGTGAATCAAATT+TGG 0.151778 4:+19716872 None:intergenic
TCCCCGTGCTTCCACTTTAC+TGG 0.211533 4:-19716476 MsG0480019405.01.T01:CDS
TTATGGAAAATGACAGATTT+TGG 0.219105 4:-19716180 MsG0480019405.01.T01:CDS
AGTATTATTGGCTCTATCTT+TGG 0.226560 4:-19716701 MsG0480019405.01.T01:CDS
ATTGGCCTCGTGAGTATTAT+TGG 0.231090 4:-19716713 MsG0480019405.01.T01:CDS
CTAGACTTAGTTCTTGTAGC+TGG 0.275747 4:+19716675 None:intergenic
ATTTGGAATCAGAGGCTATT+AGG 0.281611 4:-19717241 MsG0480019405.01.T01:intron
CAAGGATTACGTTGAAAGTT+TGG 0.297233 4:-19715929 MsG0480019405.01.T01:CDS
GCCATGTGTCAGCCTATAAA+AGG 0.316761 4:-19719223 MsG0480019405.01.T01:five_prime_UTR
TATTTCAAGCAAAACTTATA+AGG 0.322117 4:-19716601 MsG0480019405.01.T01:CDS
GAAGGCGGGTATACATGTTT+TGG 0.341876 4:+19716907 None:intergenic
ATTTGAGTGGTACAATTAAC+TGG 0.342115 4:-19716425 MsG0480019405.01.T01:CDS
TTAGAATCACTAATAAAATA+TGG 0.348136 4:-19715963 MsG0480019405.01.T01:CDS
GGTAGCGTTTCGTGTGGATT+TGG 0.355918 4:-19716577 MsG0480019405.01.T01:CDS
GCCACCTCACTGAGCAAGTC+AGG 0.362209 4:-19719201 MsG0480019405.01.T01:five_prime_UTR
TCAATAAATATTCGCTTGAA+TGG 0.362317 4:+19716109 None:intergenic
TGGTGAATCAAATTTGGGTC+TGG 0.376962 4:+19716878 None:intergenic
TCAATTGAACTGTGCTTCAA+TGG 0.380133 4:+19717215 None:intergenic
CACTGAATTATTGCTTCCTC+GGG 0.382772 4:-19716295 MsG0480019405.01.T01:CDS
TTCTCGTCCAATTGGTAGTA+AGG 0.385938 4:+19716813 None:intergenic
TCAACTTTGCGGTAAATTCA+TGG 0.389806 4:-19716515 MsG0480019405.01.T01:CDS
CTTCGTGGTGAATCAAATTT+GGG 0.390823 4:+19716873 None:intergenic
CTGCAATCCTTACTACCAAT+TGG 0.396118 4:-19716820 MsG0480019405.01.T01:CDS
TTGAGTTGTTGCGTTGTGAA+TGG 0.410376 4:+19719171 None:intergenic
AGATGCATTTGAACAAAGTC+AGG 0.412216 4:+19717038 None:intergenic
TCATCTCGTGCAAGCCTTCG+TGG 0.421265 4:+19716858 None:intergenic
ACACACTTGAATTGCATAAG+AGG 0.424414 4:+19717092 None:intergenic
CTAATAAAATATGGTGGTTG+TGG 0.429486 4:-19715954 MsG0480019405.01.T01:CDS
ACACTGAATTATTGCTTCCT+CGG 0.430168 4:-19716296 MsG0480019405.01.T01:CDS
TAGACTTAGTTCTTGTAGCT+GGG 0.431933 4:+19716676 None:intergenic
CAACTTTGCGGTAAATTCAT+GGG 0.438337 4:-19716514 MsG0480019405.01.T01:CDS
AACCAACGACCCACCATGTA+TGG 0.440258 4:+19716787 None:intergenic
GAAACTCACTTTCATCGAGT+TGG 0.457779 4:+19715904 None:intergenic
CAAACTTTCAACGTAATCCT+TGG 0.459013 4:+19715930 None:intergenic
ACCTGTTGTGACACTAAATC+AGG 0.462844 4:+19717164 None:intergenic
TATGGTAATTCTCGTCCAAT+TGG 0.464416 4:+19716805 None:intergenic
AAAGAGAACTTAAAATTACT+AGG 0.464694 4:+19716633 None:intergenic
ATTTCTATGATAAGTTCGTC+GGG 0.465336 4:+19717137 None:intergenic
GGTGAATCAAATTTGGGTCT+GGG 0.478923 4:+19716879 None:intergenic
TTATGACGCTGAATTGTTCA+AGG 0.484221 4:+19716952 None:intergenic
GATTTCTATGATAAGTTCGT+CGG 0.488604 4:+19717136 None:intergenic
AATTGCATAAGAGGTTTCAC+TGG 0.489565 4:+19717101 None:intergenic
CATTTGAACAAAGTCAGGAT+TGG 0.495810 4:+19717043 None:intergenic
TGAGTTGTTGCGTTGTGAAT+GGG 0.498158 4:+19719172 None:intergenic
ACCTGATTTAGTGTCACAAC+AGG 0.498237 4:-19717165 MsG0480019405.01.T01:CDS
TAATAAAATATGGTGGTTGT+GGG 0.498920 4:-19715953 MsG0480019405.01.T01:CDS
AATGCTCTCGACATAATGAT+TGG 0.501183 4:-19716731 MsG0480019405.01.T01:CDS
AACCAGTAAAGTGGAAGCAC+GGG 0.511083 4:+19716474 None:intergenic
GCTGAATTGTTCAAGGGTTG+TGG 0.513670 4:+19716959 None:intergenic
ATGTATCAGCATTCTTAGAA+AGG 0.523634 4:+19716055 None:intergenic
TCACGCTTAAACCAGTAAAG+TGG 0.526510 4:+19716465 None:intergenic
GGTAGTAAGGATTGCAGCGA+AGG 0.534873 4:+19716826 None:intergenic
CCCTGACTTGCTCAGTGAGG+TGG 0.541167 4:+19719200 None:intergenic
CAGAATAGAAATAATTGCGA+AGG 0.543645 4:+19716397 None:intergenic
TTTATTGAACTTTGAAACGA+TGG 0.543964 4:-19716094 MsG0480019405.01.T01:CDS
AATATGGTGGTTGTGGGCCA+AGG 0.544250 4:-19715947 MsG0480019405.01.T01:CDS
AAAGTCAGGATTGGAGATGC+GGG 0.547288 4:+19717052 None:intergenic
TATAATTGCAGAGACAATAG+AGG 0.548187 4:-19715994 MsG0480019405.01.T01:CDS
ATCCACACCTTGCACTAATG+TGG 0.548276 4:-19716998 MsG0480019405.01.T01:CDS
CAAAGTCAGGATTGGAGATG+CGG 0.550863 4:+19717051 None:intergenic
TACCATACATGGTGGGTCGT+TGG 0.551695 4:-19716789 MsG0480019405.01.T01:CDS
AACTTTGCGGTAAATTCATG+GGG 0.561736 4:-19716513 MsG0480019405.01.T01:CDS
AAGAGAACTTAAAATTACTA+GGG 0.566111 4:+19716634 None:intergenic
GAATTGTTCAAGGGTTGTGG+AGG 0.574371 4:+19716962 None:intergenic
GAGTGGTACAATTAACTGGT+TGG 0.581638 4:-19716421 MsG0480019405.01.T01:CDS
TTCAAGCAAAACTTATAAGG+TGG 0.582636 4:-19716598 MsG0480019405.01.T01:CDS
TGGGTCGTTGGTTCATGCAA+TGG 0.582754 4:-19716777 MsG0480019405.01.T01:CDS
TGGACGAGAATTACCATACA+TGG 0.583101 4:-19716800 MsG0480019405.01.T01:CDS
TAAGGTGGTAGCGTTTCGTG+TGG 0.588078 4:-19716583 MsG0480019405.01.T01:CDS
AAACCAGTAAAGTGGAAGCA+CGG 0.588834 4:+19716473 None:intergenic
TGCAAGGTGTGGATTTCGTG+AGG 0.589341 4:+19717007 None:intergenic
TTCCACATTAGTGCAAGGTG+TGG 0.591108 4:+19716996 None:intergenic
AGAATAGAAATAATTGCGAA+GGG 0.597581 4:+19716398 None:intergenic
AACAATGGTGTCTATTTGAG+TGG 0.597994 4:-19716438 MsG0480019405.01.T01:CDS
CATGTTTCCACATTAGTGCA+AGG 0.604808 4:+19716991 None:intergenic
TGGGTCTGGGAAAGTGAAGG+CGG 0.607702 4:+19716892 None:intergenic
ACGAAGGCTTGCACGAGATG+AGG 0.618413 4:-19716856 MsG0480019405.01.T01:CDS
AATTGTTCAAGGGTTGTGGA+GGG 0.621767 4:+19716963 None:intergenic
TTAAGCAAAACAACAAGCGT+TGG 0.621859 4:+19716246 None:intergenic
ATTGCATAAGAGGTTTCACT+GGG 0.626541 4:+19717102 None:intergenic
GTGGATTTGGATAAAGAGCA+TGG 0.633528 4:-19716564 MsG0480019405.01.T01:CDS
CCAAATTTGATTCACCACGA+AGG 0.633806 4:-19716872 MsG0480019405.01.T01:CDS
CCACCTCACTGAGCAAGTCA+GGG 0.634193 4:-19719200 MsG0480019405.01.T01:five_prime_UTR
GGGTCTGGGAAAGTGAAGGC+GGG 0.635188 4:+19716893 None:intergenic
TATGACGCTGAATTGTTCAA+GGG 0.637898 4:+19716953 None:intergenic
CTATGATAAGTTCGTCGGGG+AGG 0.639118 4:+19717141 None:intergenic
TTTGGAGTAAAAGAGAAATG+GGG 0.643395 4:+19716925 None:intergenic
GTAGTAAGGATTGCAGCGAA+GGG 0.644108 4:+19716827 None:intergenic
GAATCACTAATAAAATATGG+TGG 0.650968 4:-19715960 MsG0480019405.01.T01:CDS
ATTTGGGTCTGGGAAAGTGA+AGG 0.656708 4:+19716889 None:intergenic
CGAGAATTACCATACATGGT+GGG 0.671080 4:-19716796 MsG0480019405.01.T01:CDS
TTTAAGCGTGAAAAGAACAA+TGG 0.671441 4:-19716453 MsG0480019405.01.T01:CDS
TGACCCTGACTTGCTCAGTG+AGG 0.672602 4:+19719197 None:intergenic
GCATTCTTAGAAAGGTACAA+TGG 0.673575 4:+19716063 None:intergenic
ACGAGAATTACCATACATGG+TGG 0.687383 4:-19716797 MsG0480019405.01.T01:CDS
TTGAAGAAGAAGCTATGCAG+CGG 0.688153 4:-19717196 MsG0480019405.01.T01:exon
TTATCATAGAAATCATGACA+TGG 0.691177 4:-19717127 MsG0480019405.01.T01:CDS
ACCAGTAAAGTGGAAGCACG+GGG 0.694579 4:+19716475 None:intergenic
GCATGGTAATGCAACAAGTG+TGG 0.706443 4:-19716547 MsG0480019405.01.T01:CDS
TTTCTATGATAAGTTCGTCG+GGG 0.715258 4:+19717138 None:intergenic
ACTGAATTATTGCTTCCTCG+GGG 0.721082 4:-19716294 MsG0480019405.01.T01:CDS
TAGAGCCAATAATACTCACG+AGG 0.734472 4:+19716708 None:intergenic
GACACCTCATCAAAACCCCG+AGG 0.762728 4:+19716279 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATCCAAAAATAAT+AGG - Chr4:19716489-19716508 MsG0480019405.01.T01:CDS 10.0%
!! AAAAAAATCCAAAAATAATA+GGG - Chr4:19716490-19716509 MsG0480019405.01.T01:CDS 10.0%
!! ATAATTGTGTTAAATTAATA+GGG + Chr4:19717141-19717160 None:intergenic 10.0%
!! TATAATTGTGTTAAATTAAT+AGG + Chr4:19717142-19717161 None:intergenic 10.0%
!! AAATTATCATAATCAACTAT+TGG + Chr4:19716706-19716725 None:intergenic 15.0%
!! AATAGTTGATTATGATAATT+TGG - Chr4:19716705-19716724 MsG0480019405.01.T01:CDS 15.0%
!! ATGAAATAATAAATGAGTAA+CGG - Chr4:19716903-19716922 MsG0480019405.01.T01:CDS 15.0%
!! TCTATATAGTATTAATTGAA+GGG + Chr4:19716642-19716661 None:intergenic 15.0%
!! TTAGAATCACTAATAAAATA+TGG - Chr4:19719172-19719191 MsG0480019405.01.T01:five_prime_UTR 15.0%
!! TTCTATATAGTATTAATTGA+AGG + Chr4:19716643-19716662 None:intergenic 15.0%
!!! TGTACTTTTATGTTTAAATT+TGG - Chr4:19717877-19717896 MsG0480019405.01.T01:intron 15.0%
!! AAAGAGAACTTAAAATTACT+AGG + Chr4:19718505-19718524 None:intergenic 20.0%
!! AACAAAATTATTCTCCAAAA+TGG + Chr4:19716787-19716806 None:intergenic 20.0%
!! AAGAGAACTTAAAATTACTA+GGG + Chr4:19718504-19718523 None:intergenic 20.0%
!! AATGGACAAGTATTATAAAA+CGG + Chr4:19716769-19716788 None:intergenic 20.0%
!! ACGAAGAATACAAAAATAAT+AGG - Chr4:19716458-19716477 MsG0480019405.01.T01:CDS 20.0%
!! CGAAGAATACAAAAATAATA+GGG - Chr4:19716459-19716478 MsG0480019405.01.T01:CDS 20.0%
!! TAATCTATACAATATTGCAT+AGG - Chr4:19717106-19717125 MsG0480019405.01.T01:CDS 20.0%
!! TATGTGTAATTTCTTCAAAA+TGG - Chr4:19716986-19717005 MsG0480019405.01.T01:CDS 20.0%
!! TATTTCAAGCAAAACTTATA+AGG - Chr4:19718534-19718553 MsG0480019405.01.T01:intron 20.0%
!! TCTAGTCAATATGATATTTA+AGG - Chr4:19717738-19717757 MsG0480019405.01.T01:intron 20.0%
!! TTCAATGCAACATTAATTAT+TGG - Chr4:19716831-19716850 MsG0480019405.01.T01:CDS 20.0%
!! TTCTATTCTGATTATGAAAT+TGG - Chr4:19718751-19718770 MsG0480019405.01.T01:intron 20.0%
!!! AAACAACATTCATTTTGAAA+CGG - Chr4:19717061-19717080 MsG0480019405.01.T01:CDS 20.0%
!!! AATTTTTTTCTTTTTGACCA+TGG - Chr4:19717688-19717707 MsG0480019405.01.T01:intron 20.0%
!!! AGTAATTTTAAGTTCTCTTT+TGG - Chr4:19718505-19718524 MsG0480019405.01.T01:intron 20.0%
!!! ATATTTCACCCTATTATTTT+TGG + Chr4:19716501-19716520 None:intergenic 20.0%
!!! TGTTTTTGTCATGATTTTAA+GGG - Chr4:19718919-19718938 MsG0480019405.01.T01:intron 20.0%
!!! TTGTTTTTGTCATGATTTTA+AGG - Chr4:19718918-19718937 MsG0480019405.01.T01:intron 20.0%
!!! TTTATAATACTTGTCCATTT+TGG - Chr4:19716770-19716789 MsG0480019405.01.T01:CDS 20.0%
!!! TTTTTCTCTCTACAATAAAT+AGG + Chr4:19716876-19716895 None:intergenic 20.0%
! AAAACAATAGAGAGAGAAAA+AGG + Chr4:19717538-19717557 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - Chr4:19717563-19717582 MsG0480019405.01.T01:intron 25.0%
! AGAATAGAAATAATTGCGAA+GGG + Chr4:19718740-19718759 None:intergenic 25.0%
! GAATCACTAATAAAATATGG+TGG - Chr4:19719175-19719194 MsG0480019405.01.T01:five_prime_UTR 25.0%
! TAATAAAATATGGTGGTTGT+GGG - Chr4:19719182-19719201 MsG0480019405.01.T01:five_prime_UTR 25.0%
! TACTTATAAAAGTGACTAGA+GGG - Chr4:19717413-19717432 MsG0480019405.01.T01:intron 25.0%
! TCAATAAATATTCGCTTGAA+TGG + Chr4:19719029-19719048 None:intergenic 25.0%
! TCATTAATTTCATTTGACCA+GGG - Chr4:19717190-19717209 MsG0480019405.01.T01:exon 25.0%
! TCTCTACAATAAATAGGTAA+GGG + Chr4:19716870-19716889 None:intergenic 25.0%
! TTACTTATAAAAGTGACTAG+AGG - Chr4:19717412-19717431 MsG0480019405.01.T01:intron 25.0%
! TTATCATAGAAATCATGACA+TGG - Chr4:19718008-19718027 MsG0480019405.01.T01:intron 25.0%
!! AGAAAAAGTTGTTATTGCAT+TGG + Chr4:19716608-19716627 None:intergenic 25.0%
!! ATCTTCAAGTATTTTATCCT+TGG - Chr4:19717790-19717809 MsG0480019405.01.T01:intron 25.0%
!! ATGTTTAAATTTGGAATCAG+AGG - Chr4:19717886-19717905 MsG0480019405.01.T01:intron 25.0%
!! TCATTTTCCATAAAACAAGA+TGG + Chr4:19718948-19718967 None:intergenic 25.0%
!! TCTTCAAGTATTTTATCCTT+GGG - Chr4:19717791-19717810 MsG0480019405.01.T01:intron 25.0%
!! TTATGGAAAATGACAGATTT+TGG - Chr4:19718955-19718974 MsG0480019405.01.T01:intron 25.0%
!! TTCTTTTCTTTGAATTCGTT+GGG + Chr4:19716057-19716076 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + Chr4:19717564-19717583 None:intergenic 25.0%
!!! TTTATTGAACTTTGAAACGA+TGG - Chr4:19719041-19719060 MsG0480019405.01.T01:intron 25.0%
!!! TTTTGGAGTAAAAGAGAAAT+GGG + Chr4:19718214-19718233 None:intergenic 25.0%
AATACTTGAAGATTGATCGT+AGG + Chr4:19717783-19717802 None:intergenic 30.0%
ATACTTGAAGATTGATCGTA+GGG + Chr4:19717782-19717801 None:intergenic 30.0%
ATGTATCAGCATTCTTAGAA+AGG + Chr4:19719083-19719102 None:intergenic 30.0%
ATTTCTATGATAAGTTCGTC+GGG + Chr4:19718001-19718020 None:intergenic 30.0%
ATTTGAGTGGTACAATTAAC+TGG - Chr4:19718710-19718729 MsG0480019405.01.T01:intron 30.0%
CAACAACTCAACAAAATTGT+GGG - Chr4:19715976-19715995 MsG0480019405.01.T01:CDS 30.0%
CAGAATAGAAATAATTGCGA+AGG + Chr4:19718741-19718760 None:intergenic 30.0%
CTAATAAAATATGGTGGTTG+TGG - Chr4:19719181-19719200 MsG0480019405.01.T01:five_prime_UTR 30.0%
CTCATTAATTTCATTTGACC+AGG - Chr4:19717189-19717208 MsG0480019405.01.T01:exon 30.0%
CTCTCTACAATAAATAGGTA+AGG + Chr4:19716871-19716890 None:intergenic 30.0%
GACAAGTATTATAAAACGGA+GGG + Chr4:19716765-19716784 None:intergenic 30.0%
GATAACTAATTATTCTCCCA+AGG + Chr4:19717810-19717829 None:intergenic 30.0%
GATTTCTATGATAAGTTCGT+CGG + Chr4:19718002-19718021 None:intergenic 30.0%
TATAATTGCAGAGACAATAG+AGG - Chr4:19719141-19719160 MsG0480019405.01.T01:intron 30.0%
TCAACAAAGTTGTCATCAAA+TGG - Chr4:19717589-19717608 MsG0480019405.01.T01:intron 30.0%
TGTATCAATGATACACTCTT+CGG - Chr4:19717272-19717291 MsG0480019405.01.T01:intron 30.0%
TTCAAGCAAAACTTATAAGG+TGG - Chr4:19718537-19718556 MsG0480019405.01.T01:intron 30.0%
TTTAAGCGTGAAAAGAACAA+TGG - Chr4:19718682-19718701 MsG0480019405.01.T01:intron 30.0%
! AATGGACAAGTATTGTGAAA+CGG - Chr4:19717004-19717023 MsG0480019405.01.T01:CDS 30.0%
! AGGGTGAAATATCTTTTTAG+TGG - Chr4:19716509-19716528 MsG0480019405.01.T01:CDS 30.0%
! CTTCTTTTCTTTGAATTCGT+TGG + Chr4:19716058-19716077 None:intergenic 30.0%
! TTTGGAGTAAAAGAGAAATG+GGG + Chr4:19718213-19718232 None:intergenic 30.0%
!! AGTATTATTGGCTCTATCTT+TGG - Chr4:19718434-19718453 MsG0480019405.01.T01:intron 30.0%
!! ATTTTGGTACGAATTTGTGT+TGG + Chr4:19716141-19716160 None:intergenic 30.0%
!! TTTTTCAGTTCACAACAACA+AGG - Chr4:19716407-19716426 MsG0480019405.01.T01:CDS 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - Chr4:19717466-19717485 MsG0480019405.01.T01:intron 30.0%
!!! GAGAGAAAGAAAAGTGTTTT+TGG + Chr4:19716010-19716029 None:intergenic 30.0%
!!! GTTTTGGAGTAAAAGAGAAA+TGG + Chr4:19718215-19718234 None:intergenic 30.0%
AAAACGGTTAGGGTTTAGAA+AGG + Chr4:19716105-19716124 None:intergenic 35.0%
AAACGGTTAGGGTTTAGAAA+GGG + Chr4:19716104-19716123 None:intergenic 35.0%
AACAATGGTGTCTATTTGAG+TGG - Chr4:19718697-19718716 MsG0480019405.01.T01:intron 35.0%
AACTTTGCGGTAAATTCATG+GGG - Chr4:19718622-19718641 MsG0480019405.01.T01:intron 35.0%
AATGCTCTCGACATAATGAT+TGG - Chr4:19718404-19718423 MsG0480019405.01.T01:intron 35.0%
AATTGCATAAGAGGTTTCAC+TGG + Chr4:19718037-19718056 None:intergenic 35.0%
ACACACTTGAATTGCATAAG+AGG + Chr4:19718046-19718065 None:intergenic 35.0%
ACACTGAATTATTGCTTCCT+CGG - Chr4:19718839-19718858 MsG0480019405.01.T01:intron 35.0%
AGATGCATTTGAACAAAGTC+AGG + Chr4:19718100-19718119 None:intergenic 35.0%
ATTGCATAAGAGGTTTCACT+GGG + Chr4:19718036-19718055 None:intergenic 35.0%
CAAACTTTCAACGTAATCCT+TGG + Chr4:19719208-19719227 None:intergenic 35.0%
CAACTTTGCGGTAAATTCAT+GGG - Chr4:19718621-19718640 MsG0480019405.01.T01:intron 35.0%
CAAGGATTACGTTGAAAGTT+TGG - Chr4:19719206-19719225 MsG0480019405.01.T01:five_prime_UTR 35.0%
CATTTGAACAAAGTCAGGAT+TGG + Chr4:19718095-19718114 None:intergenic 35.0%
CTAATTTCAAATGTACCCTG+TGG + Chr4:19717849-19717868 None:intergenic 35.0%
CTTCGTGGTGAATCAAATTT+GGG + Chr4:19718265-19718284 None:intergenic 35.0%
GCAACAACTCAACAAAATTG+TGG - Chr4:19715975-19715994 MsG0480019405.01.T01:CDS 35.0%
GGACAAGTATTATAAAACGG+AGG + Chr4:19716766-19716785 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + Chr4:19717471-19717490 None:intergenic 35.0%
TACTTGAAGATTGATCGTAG+GGG + Chr4:19717781-19717800 None:intergenic 35.0%
TATGACGCTGAATTGTTCAA+GGG + Chr4:19718185-19718204 None:intergenic 35.0%
TATGGTAATTCTCGTCCAAT+TGG + Chr4:19718333-19718352 None:intergenic 35.0%
TCAACTTTGCGGTAAATTCA+TGG - Chr4:19718620-19718639 MsG0480019405.01.T01:intron 35.0%
TCAATTGAACTGTGCTTCAA+TGG + Chr4:19717923-19717942 None:intergenic 35.0%
TCATTAATACATCATCGCCA+TGG + Chr4:19717708-19717727 None:intergenic 35.0%
TTAAGCAAAACAACAAGCGT+TGG + Chr4:19718892-19718911 None:intergenic 35.0%
TTATGACGCTGAATTGTTCA+AGG + Chr4:19718186-19718205 None:intergenic 35.0%
TTGTGAACTGAAAAACGAAC+CGG + Chr4:19716402-19716421 None:intergenic 35.0%
TTTCTATGATAAGTTCGTCG+GGG + Chr4:19718000-19718019 None:intergenic 35.0%
! ATTTGGAATCAGAGGCTATT+AGG - Chr4:19717894-19717913 MsG0480019405.01.T01:intron 35.0%
! CCCTTTGTTTCAAAATGAGT+GGG - Chr4:19716536-19716555 MsG0480019405.01.T01:CDS 35.0%
! CCTTTGTTTCAAAATGAGTG+GGG - Chr4:19716537-19716556 MsG0480019405.01.T01:CDS 35.0%
! GCATTCTTAGAAAGGTACAA+TGG + Chr4:19719075-19719094 None:intergenic 35.0%
! GGTGAAAGTTTTCAACTTTG+CGG - Chr4:19718609-19718628 MsG0480019405.01.T01:intron 35.0%
! GTGTGTTCGATGATGAATTT+TGG + Chr4:19716157-19716176 None:intergenic 35.0%
! TAGACTTAGTTCTTGTAGCT+GGG + Chr4:19718462-19718481 None:intergenic 35.0%
!! ATTTGACCAGGGTATCTTTT+GGG - Chr4:19717201-19717220 MsG0480019405.01.T01:exon 35.0%
!!! ATTTTGGAGTTCAAGAGTCT+TGG - Chr4:19718971-19718990 MsG0480019405.01.T01:intron 35.0%
!!! CACTCATTTTGAAACAAAGG+GGG + Chr4:19716537-19716556 None:intergenic 35.0%
!!! CCACTCATTTTGAAACAAAG+GGG + Chr4:19716538-19716557 None:intergenic 35.0%
!!! CCCACTCATTTTGAAACAAA+GGG + Chr4:19716539-19716558 None:intergenic 35.0%
!!! GAAAAGTGTTTTTGGTGATG+TGG + Chr4:19716002-19716021 None:intergenic 35.0%
!!! GCTGTTTGATTCGTTTTTTG+TGG + Chr4:19716196-19716215 None:intergenic 35.0%
AAACCAGTAAAGTGGAAGCA+CGG + Chr4:19718665-19718684 None:intergenic 40.0%
AACGGTTAGGGTTTAGAAAG+GGG + Chr4:19716103-19716122 None:intergenic 40.0%
AAGGGGATGAATGTTCTTGA+AGG + Chr4:19716086-19716105 None:intergenic 40.0%
AATTGTTCAAGGGTTGTGGA+GGG + Chr4:19718175-19718194 None:intergenic 40.0%
ACCTGATTTAGTGTCACAAC+AGG - Chr4:19717970-19717989 MsG0480019405.01.T01:intron 40.0%
ACCTGTTGTGACACTAAATC+AGG + Chr4:19717974-19717993 None:intergenic 40.0%
ACCTTAGGGTTTGAATTGCA+GGG + Chr4:19716299-19716318 None:intergenic 40.0%
ACGAGAATTACCATACATGG+TGG - Chr4:19718338-19718357 MsG0480019405.01.T01:intron 40.0%
ACTGAATTATTGCTTCCTCG+GGG - Chr4:19718841-19718860 MsG0480019405.01.T01:intron 40.0%
ACTTGAAGATTGATCGTAGG+GGG + Chr4:19717780-19717799 None:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + Chr4:19717528-19717547 None:intergenic 40.0%
CACTGAATTATTGCTTCCTC+GGG - Chr4:19718840-19718859 MsG0480019405.01.T01:intron 40.0%
CATGTTTCCACATTAGTGCA+AGG + Chr4:19718147-19718166 None:intergenic 40.0%
CCAAATTTGATTCACCACGA+AGG - Chr4:19718263-19718282 MsG0480019405.01.T01:intron 40.0%
CCTTCGTGGTGAATCAAATT+TGG + Chr4:19718266-19718285 None:intergenic 40.0%
CGAGAATTACCATACATGGT+GGG - Chr4:19718339-19718358 MsG0480019405.01.T01:intron 40.0%
CTGCAATCCTTACTACCAAT+TGG - Chr4:19718315-19718334 MsG0480019405.01.T01:intron 40.0%
GAAGAAGAAAAGGAGTTCAC+CGG - Chr4:19716380-19716399 MsG0480019405.01.T01:CDS 40.0%
GAATTCGTTGGGTTTGATCT+TGG + Chr4:19716046-19716065 None:intergenic 40.0%
GAGTGGTACAATTAACTGGT+TGG - Chr4:19718714-19718733 MsG0480019405.01.T01:intron 40.0%
GGTGAATCAAATTTGGGTCT+GGG + Chr4:19718259-19718278 None:intergenic 40.0%
GGTTTGATCTTGGATGATTC+TGG + Chr4:19716036-19716055 None:intergenic 40.0%
GTGGATTTGGATAAAGAGCA+TGG - Chr4:19718571-19718590 MsG0480019405.01.T01:intron 40.0%
TAGAGCCAATAATACTCACG+AGG + Chr4:19718430-19718449 None:intergenic 40.0%
TCACGCTTAAACCAGTAAAG+TGG + Chr4:19718673-19718692 None:intergenic 40.0%
TCGAAGCAGAGAAGAAGAAA+AGG - Chr4:19716370-19716389 MsG0480019405.01.T01:CDS 40.0%
TGAGTTGTTGCGTTGTGAAT+GGG + Chr4:19715966-19715985 None:intergenic 40.0%
TGGACGAGAATTACCATACA+TGG - Chr4:19718335-19718354 MsG0480019405.01.T01:intron 40.0%
TGGTGAATCAAATTTGGGTC+TGG + Chr4:19718260-19718279 None:intergenic 40.0%
TTCTTCCTGTGATCACCTTA+GGG + Chr4:19716313-19716332 None:intergenic 40.0%
TTGAAGAAGAAGCTATGCAG+CGG - Chr4:19717939-19717958 MsG0480019405.01.T01:intron 40.0%
TTTGTGTTGGATTGTGTTGC+TGG + Chr4:19716128-19716147 None:intergenic 40.0%
! ATTGGCCTCGTGAGTATTAT+TGG - Chr4:19718422-19718441 MsG0480019405.01.T01:intron 40.0%
! CCCCTTTGTTTCAAAATGAG+TGG - Chr4:19716535-19716554 MsG0480019405.01.T01:CDS 40.0%
! CTAGACTTAGTTCTTGTAGC+TGG + Chr4:19718463-19718482 None:intergenic 40.0%
! GACAAGTATTGTGAAACGGA+GGG - Chr4:19717008-19717027 MsG0480019405.01.T01:CDS 40.0%
! TGGATTGTGTTGCTGGAAAA+CGG + Chr4:19716121-19716140 None:intergenic 40.0%
! TTCTCGTCCAATTGGTAGTA+AGG + Chr4:19718325-19718344 None:intergenic 40.0%
! TTGAGTTGTTGCGTTGTGAA+TGG + Chr4:19715967-19715986 None:intergenic 40.0%
!! CATTTGACCAGGGTATCTTT+TGG - Chr4:19717200-19717219 MsG0480019405.01.T01:exon 40.0%
!!! AGGGAAGCCATCTTGTTTTA+TGG - Chr4:19718938-19718957 MsG0480019405.01.T01:intron 40.0%
!!! CCCCACTCATTTTGAAACAA+AGG + Chr4:19716540-19716559 None:intergenic 40.0%
AAAGTCAGGATTGGAGATGC+GGG + Chr4:19718086-19718105 None:intergenic 45.0%
AGGAATCTACCAGACACATC+AGG - Chr4:19716427-19716446 MsG0480019405.01.T01:CDS 45.0%
ATCCACACCTTGCACTAATG+TGG - Chr4:19718137-19718156 MsG0480019405.01.T01:intron 45.0%
ATCTACCAGACACATCAGGA+AGG - Chr4:19716431-19716450 MsG0480019405.01.T01:CDS 45.0%
ATTTGGGTCTGGGAAAGTGA+AGG + Chr4:19718249-19718268 None:intergenic 45.0%
CAAAGTCAGGATTGGAGATG+CGG + Chr4:19718087-19718106 None:intergenic 45.0%
CACCTTAGGGTTTGAATTGC+AGG + Chr4:19716300-19716319 None:intergenic 45.0%
CTTCTTCCTGTGATCACCTT+AGG + Chr4:19716314-19716333 None:intergenic 45.0%
GAATTGTTCAAGGGTTGTGG+AGG + Chr4:19718176-19718195 None:intergenic 45.0%
GCTGAATTGTTCAAGGGTTG+TGG + Chr4:19718179-19718198 None:intergenic 45.0%
GTAGTAAGGATTGCAGCGAA+GGG + Chr4:19718311-19718330 None:intergenic 45.0%
TCAAACCCTAAGGTGATCAC+AGG - Chr4:19716305-19716324 MsG0480019405.01.T01:CDS 45.0%
TCCCTGCAATTCAAACCCTA+AGG - Chr4:19716295-19716314 MsG0480019405.01.T01:CDS 45.0%
TGAATCCTTCCTGATGTGTC+TGG + Chr4:19716439-19716458 None:intergenic 45.0%
TTCCACATTAGTGCAAGGTG+TGG + Chr4:19718142-19718161 None:intergenic 45.0%
! AACCAGTAAAGTGGAAGCAC+GGG + Chr4:19718664-19718683 None:intergenic 45.0%
! GAAGGCGGGTATACATGTTT+TGG + Chr4:19718231-19718250 None:intergenic 45.0%
! GCATGGTAATGCAACAAGTG+TGG - Chr4:19718588-19718607 MsG0480019405.01.T01:intron 45.0%
! GGACAAGTATTGTGAAACGG+AGG - Chr4:19717007-19717026 MsG0480019405.01.T01:CDS 45.0%
! GTGTTGCTGGAAAACGGTTA+GGG + Chr4:19716115-19716134 None:intergenic 45.0%
! TCAGTGAGGTGGCCTTTTAT+AGG + Chr4:19715927-19715946 None:intergenic 45.0%
! TGTGTTGCTGGAAAACGGTT+AGG + Chr4:19716116-19716135 None:intergenic 45.0%
AACCAACGACCCACCATGTA+TGG + Chr4:19718351-19718370 None:intergenic 50.0%
AATATGGTGGTTGTGGGCCA+AGG - Chr4:19719188-19719207 MsG0480019405.01.T01:five_prime_UTR 50.0%
AGGGTTTGAATTGCAGGGAG+AGG + Chr4:19716294-19716313 None:intergenic 50.0%
CTATGATAAGTTCGTCGGGG+AGG + Chr4:19717997-19718016 None:intergenic 50.0%
GGTAGCGTTTCGTGTGGATT+TGG - Chr4:19718558-19718577 MsG0480019405.01.T01:intron 50.0%
GGTAGTAAGGATTGCAGCGA+AGG + Chr4:19718312-19718331 None:intergenic 50.0%
TGCAAGGTGTGGATTTCGTG+AGG + Chr4:19718131-19718150 None:intergenic 50.0%
! AAGTGAGAGCACAACTCCAC+AGG - Chr4:19717830-19717849 MsG0480019405.01.T01:intron 50.0%
! ACCAGTAAAGTGGAAGCACG+GGG + Chr4:19718663-19718682 None:intergenic 50.0%
! AGTGAGAGCACAACTCCACA+GGG - Chr4:19717831-19717850 MsG0480019405.01.T01:intron 50.0%
! TAAGGTGGTAGCGTTTCGTG+TGG - Chr4:19718552-19718571 MsG0480019405.01.T01:intron 50.0%
!! CAGGGTATCTTTTGGGAGGA+CGG - Chr4:19717208-19717227 MsG0480019405.01.T01:five_prime_UTR 50.0%
!! TACCATACATGGTGGGTCGT+TGG - Chr4:19718346-19718365 MsG0480019405.01.T01:intron 50.0%
!! TGACCAGGGTATCTTTTGGG+AGG - Chr4:19717204-19717223 MsG0480019405.01.T01:exon 50.0%
!! TGGGTCGTTGGTTCATGCAA+TGG - Chr4:19718358-19718377 MsG0480019405.01.T01:intron 50.0%
ACGAAGGCTTGCACGAGATG+AGG - Chr4:19718279-19718298 MsG0480019405.01.T01:intron 55.0%
CCACCTCACTGAGCAAGTCA+GGG - Chr4:19715935-19715954 MsG0480019405.01.T01:CDS 55.0%
CGTCCTCCCAAAAGATACCC+TGG + Chr4:19717210-19717229 None:intergenic 55.0%
GACACCTCATCAAAACCCCG+AGG + Chr4:19718859-19718878 None:intergenic 55.0%
TCATCTCGTGCAAGCCTTCG+TGG + Chr4:19718280-19718299 None:intergenic 55.0%
TCCCCGTGCTTCCACTTTAC+TGG - Chr4:19718659-19718678 MsG0480019405.01.T01:intron 55.0%
TGGGTCTGGGAAAGTGAAGG+CGG + Chr4:19718246-19718265 None:intergenic 55.0%
!! GCTTCCTCGGGGTTTTGATG+AGG - Chr4:19718852-19718871 MsG0480019405.01.T01:intron 55.0%
!! TGACCCTGACTTGCTCAGTG+AGG + Chr4:19715941-19715960 None:intergenic 55.0%
GCCACCTCACTGAGCAAGTC+AGG - Chr4:19715934-19715953 MsG0480019405.01.T01:CDS 60.0%
GGGTCTGGGAAAGTGAAGGC+GGG + Chr4:19718245-19718264 None:intergenic 60.0%
!! CCCTGACTTGCTCAGTGAGG+TGG + Chr4:19715938-19715957 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 19715915 19719242 19715915 ID=MsG0480019405.01;Name=MsG0480019405.01
Chr4 mRNA 19715915 19719242 19715915 ID=MsG0480019405.01.T01;Parent=MsG0480019405.01;Name=MsG0480019405.01.T01;_AED=0.50;_eAED=0.54;_QI=126|0|0|1|1|1|2|0|429
Chr4 exon 19719164 19719242 19719164 ID=MsG0480019405.01.T01:exon:7946;Parent=MsG0480019405.01.T01
Chr4 exon 19715915 19717251 19715915 ID=MsG0480019405.01.T01:exon:7945;Parent=MsG0480019405.01.T01
Chr4 five_prime_UTR 19719164 19719242 19719164 ID=MsG0480019405.01.T01:five_prime_utr;Parent=MsG0480019405.01.T01
Chr4 five_prime_UTR 19717205 19717251 19717205 ID=MsG0480019405.01.T01:five_prime_utr;Parent=MsG0480019405.01.T01
Chr4 CDS 19715915 19717204 19715915 ID=MsG0480019405.01.T01:cds;Parent=MsG0480019405.01.T01
Gene Sequence

>MsG0480019405.01.T01

ATGCAGCGGCAATATCAACCTGATTTAGTGTCACAACAGGTCCTCCCCGACGAACTTATCATAGAAATCATGACATGGCTCCCAGTGAAACCTCTTATGCAATTCAAGTGTGTTAACAAGTTTTTCAAAACCCGCATCTCCAATCCTGACTTTGTTCAAATGCATCTCAATAAATCCTCACGAAATCCACACCTTGCACTAATGTGGAAACATGACTTTCCCTCCACAACCCTTGAACAATTCAGCGTCATAACATTCCCCATTTCTCTTTTACTCCAAAACATGTATACCCGCCTTCACTTTCCCAGACCCAAATTTGATTCACCACGAAGGCTTGCACGAGATGAGGCTACTACCCTTCGCTGCAATCCTTACTACCAATTGGACGAGAATTACCATACATGGTGGGTCGTTGGTTCATGCAATGGATTGTTGTGCTTGATTGATGTTCAATGCTCTCGACATAATGATTGGCCTCGTGAGTATTATTGGCTCTATCTTTGGAACCCAGCTACAAGAACTAAGTCTAGAAGAAATTCAATCACTTTCCCTAGTAATTTTAAGTTCTCTTTTGGCTATGATATTTCAAGCAAAACTTATAAGGTGGTAGCGTTTCGTGTGGATTTGGATAAAGAGCATGGTAATGCAACAAGTGTGGTGAAAGTTTTCAACTTTGCGGTAAATTCATGGGGAAACATTCAATGTTTCCCCGTGCTTCCACTTTACTGGTTTAAGCGTGAAAAGAACAATGGTGTCTATTTGAGTGGTACAATTAACTGGTTGGCCCTTCGCAATTATTTCTATTCTGATTATGAAATTGGTAATGTTAGCAGTATAACTGTTGAGCAATATGTGATTGTTTCGCTTGATCTCTCAACTGAGTCATACACTGAATTATTGCTTCCTCGGGGTTTTGATGAGGTGTCTCGTGTTCAGCCAACGCTTGTTGTTTTGCTTAACTGTCTTTGTTTTTGTCATGATTTTAAGGGAAGCCATCTTGTTTTATGGAAAATGACAGATTTTGGAGTTCAAGAGTCTTGGATTCAGTTGTTTAAAATTAGTTATGAGAATTTCCATTCAAGCGAATATTTATTGAACTTTGAAACGATGGAGTTCTTGCCATTGTACCTTTCTAAGAATGCTGATACATTGATATTTGCAAATGATGAAAACGACGCAGCATTTATCTATAATTGCAGAGACAATAGAGGTGAGCAAATTAGAATCACTAATAAAATATGGTGGTTGTGGGCCAAGGATTACGTTGAAAGTTTGGTTCCAACTCGATGA
Protein sequence

>MsG0480019405.01.T01

MQRQYQPDLVSQQVLPDELIIEIMTWLPVKPLMQFKCVNKFFKTRISNPDFVQMHLNKSSRNPHLALMWKHDFPSTTLEQFSVITFPISLLLQNMYTRLHFPRPKFDSPRRLARDEATTLRCNPYYQLDENYHTWWVVGSCNGLLCLIDVQCSRHNDWPREYYWLYLWNPATRTKSRRNSITFPSNFKFSFGYDISSKTYKVVAFRVDLDKEHGNATSVVKVFNFAVNSWGNIQCFPVLPLYWFKREKNNGVYLSGTINWLALRNYFYSDYEIGNVSSITVEQYVIVSLDLSTESYTELLLPRGFDEVSRVQPTLVVLLNCLCFCHDFKGSHLVLWKMTDFGVQESWIQLFKISYENFHSSEYLLNFETMEFLPLYLSKNADTLIFANDENDAAFIYNCRDNRGEQIRITNKIWWLWAKDYVESLVPTR*