Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033223.01.T01 | KEH15716.1 | 87.822 | 427 | 39 | 3 | 1 | 426 | 1 | 415 | 0 | 764 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033223.01.T01 | Q8GXC7 | 27.253 | 455 | 265 | 20 | 10 | 440 | 7 | 419 | 1.74E-25 | 111 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033223.01.T01 | A0A072TEQ8 | 87.822 | 427 | 39 | 3 | 1 | 426 | 1 | 415 | 0.0 | 764 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033223.01.T01 | MTR_0627s0010 | 87.822 | 427 | 39 | 3 | 1 | 426 | 1 | 415 | 0.0 | 764 |
MsG0680033223.01.T01 | MTR_6g046320 | 85.827 | 381 | 49 | 1 | 1 | 376 | 1 | 381 | 0.0 | 671 |
MsG0680033223.01.T01 | MTR_5g021880 | 64.536 | 485 | 133 | 8 | 1 | 458 | 1 | 473 | 0.0 | 595 |
MsG0680033223.01.T01 | MTR_5g021880 | 64.536 | 485 | 133 | 8 | 1 | 458 | 1 | 473 | 0.0 | 593 |
MsG0680033223.01.T01 | MTR_5g021880 | 64.536 | 485 | 133 | 8 | 1 | 458 | 1 | 473 | 0.0 | 593 |
MsG0680033223.01.T01 | MTR_5g021860 | 63.711 | 485 | 123 | 11 | 1 | 458 | 1 | 459 | 0.0 | 568 |
MsG0680033223.01.T01 | MTR_5g021860 | 63.711 | 485 | 123 | 11 | 1 | 458 | 1 | 459 | 0.0 | 566 |
MsG0680033223.01.T01 | MTR_4g027370 | 63.505 | 485 | 124 | 11 | 1 | 458 | 1 | 459 | 0.0 | 566 |
MsG0680033223.01.T01 | MTR_5g022900 | 59.305 | 489 | 141 | 13 | 1 | 458 | 1 | 462 | 0.0 | 524 |
MsG0680033223.01.T01 | MTR_5g022040 | 58.144 | 485 | 161 | 9 | 1 | 458 | 1 | 470 | 1.81e-180 | 513 |
MsG0680033223.01.T01 | MTR_5g022045 | 58.244 | 467 | 158 | 10 | 1 | 458 | 1 | 439 | 8.45e-171 | 488 |
MsG0680033223.01.T01 | MTR_5g007940 | 55.602 | 482 | 136 | 10 | 1 | 458 | 1 | 428 | 9.05e-164 | 469 |
MsG0680033223.01.T01 | MTR_5g010610 | 56.813 | 477 | 149 | 13 | 1 | 457 | 1 | 440 | 2.41e-161 | 467 |
MsG0680033223.01.T01 | MTR_7g090810 | 55.649 | 478 | 141 | 12 | 1 | 457 | 1 | 428 | 4.33e-156 | 449 |
MsG0680033223.01.T01 | MTR_5g010550 | 53.521 | 497 | 163 | 11 | 1 | 457 | 1 | 469 | 1.44e-155 | 450 |
MsG0680033223.01.T01 | MTR_5g010550 | 55.699 | 465 | 156 | 10 | 15 | 457 | 19 | 455 | 1.30e-154 | 447 |
MsG0680033223.01.T01 | MTR_5g010560 | 55.699 | 465 | 152 | 12 | 15 | 457 | 19 | 451 | 1.32e-154 | 447 |
MsG0680033223.01.T01 | MTR_5g022090 | 52.766 | 470 | 140 | 14 | 1 | 458 | 1 | 400 | 3.43e-145 | 421 |
MsG0680033223.01.T01 | MTR_7g117100 | 57.218 | 381 | 92 | 9 | 101 | 458 | 1 | 333 | 2.45e-134 | 392 |
MsG0680033223.01.T01 | MTR_5g021920 | 71.536 | 267 | 66 | 4 | 1 | 257 | 1 | 267 | 4.92e-127 | 370 |
MsG0680033223.01.T01 | MTR_5g022750 | 47.403 | 462 | 157 | 10 | 1 | 458 | 1 | 380 | 1.15e-123 | 367 |
MsG0680033223.01.T01 | MTR_5g027370 | 49.417 | 429 | 179 | 13 | 36 | 458 | 26 | 422 | 6.14e-123 | 365 |
MsG0680033223.01.T01 | MTR_5g027330 | 46.567 | 466 | 208 | 15 | 1 | 458 | 1 | 433 | 8.45e-123 | 365 |
MsG0680033223.01.T01 | MTR_5g010660 | 47.708 | 480 | 138 | 14 | 1 | 458 | 1 | 389 | 3.76e-121 | 362 |
MsG0680033223.01.T01 | MTR_7g117100 | 63.415 | 287 | 70 | 7 | 101 | 364 | 1 | 275 | 5.22e-113 | 334 |
MsG0680033223.01.T01 | MTR_7g090810 | 61.379 | 290 | 89 | 6 | 175 | 458 | 13 | 285 | 5.96e-110 | 327 |
MsG0680033223.01.T01 | MTR_4g055060 | 29.067 | 375 | 199 | 15 | 38 | 400 | 29 | 348 | 2.89e-27 | 113 |
MsG0680033223.01.T01 | MTR_3g006670 | 29.706 | 340 | 180 | 15 | 39 | 371 | 49 | 336 | 4.54e-24 | 104 |
MsG0680033223.01.T01 | MTR_3g436150 | 28.610 | 374 | 214 | 17 | 39 | 403 | 32 | 361 | 4.82e-24 | 103 |
MsG0680033223.01.T01 | MTR_7g407070 | 27.762 | 353 | 200 | 11 | 39 | 377 | 32 | 343 | 9.23e-24 | 103 |
MsG0680033223.01.T01 | MTR_3g011060 | 28.286 | 350 | 181 | 15 | 39 | 371 | 28 | 324 | 1.17e-22 | 99.8 |
MsG0680033223.01.T01 | MTR_3g007360 | 26.933 | 375 | 192 | 16 | 42 | 398 | 55 | 365 | 4.16e-22 | 98.2 |
MsG0680033223.01.T01 | MTR_3g463170 | 47.000 | 100 | 53 | 0 | 1 | 100 | 54 | 153 | 6.48e-22 | 92.4 |
MsG0680033223.01.T01 | MTR_0115s0020 | 26.331 | 357 | 197 | 14 | 39 | 371 | 10 | 324 | 7.44e-22 | 97.4 |
MsG0680033223.01.T01 | MTR_4g133170 | 24.745 | 392 | 232 | 14 | 39 | 423 | 4 | 339 | 2.21e-21 | 95.9 |
MsG0680033223.01.T01 | MTR_0064s0160 | 24.270 | 445 | 264 | 17 | 22 | 442 | 25 | 420 | 2.23e-21 | 96.7 |
MsG0680033223.01.T01 | MTR_3g007410 | 27.247 | 356 | 187 | 15 | 42 | 387 | 55 | 348 | 2.59e-21 | 95.9 |
MsG0680033223.01.T01 | MTR_2g021155 | 26.699 | 412 | 224 | 18 | 39 | 432 | 33 | 384 | 5.05e-21 | 97.1 |
MsG0680033223.01.T01 | MTR_0760s0010 | 28.571 | 329 | 174 | 14 | 45 | 371 | 53 | 322 | 5.55e-21 | 94.7 |
MsG0680033223.01.T01 | MTR_3g014540 | 28.212 | 358 | 179 | 17 | 36 | 377 | 26 | 321 | 8.26e-21 | 94.4 |
MsG0680033223.01.T01 | MTR_3g024040 | 25.915 | 355 | 200 | 14 | 45 | 398 | 37 | 329 | 1.06e-20 | 94.0 |
MsG0680033223.01.T01 | MTR_4g134560 | 26.216 | 370 | 200 | 16 | 39 | 372 | 31 | 363 | 1.28e-20 | 94.7 |
MsG0680033223.01.T01 | MTR_3g036335 | 27.794 | 349 | 189 | 14 | 39 | 379 | 41 | 334 | 1.74e-20 | 93.6 |
MsG0680033223.01.T01 | MTR_3g024110 | 26.316 | 342 | 190 | 11 | 39 | 377 | 101 | 383 | 2.56e-20 | 93.6 |
MsG0680033223.01.T01 | MTR_3g009310 | 27.317 | 410 | 229 | 19 | 39 | 440 | 42 | 390 | 3.34e-20 | 92.4 |
MsG0680033223.01.T01 | MTR_2g046920 | 26.190 | 420 | 227 | 17 | 38 | 442 | 23 | 374 | 3.43e-20 | 92.4 |
MsG0680033223.01.T01 | MTR_5g011200 | 26.100 | 341 | 202 | 14 | 39 | 376 | 17 | 310 | 4.98e-20 | 92.0 |
MsG0680033223.01.T01 | MTR_2g078900 | 27.746 | 346 | 172 | 17 | 39 | 371 | 33 | 313 | 5.03e-20 | 91.7 |
MsG0680033223.01.T01 | MTR_5g046300 | 28.448 | 348 | 166 | 16 | 39 | 371 | 4 | 283 | 7.73e-20 | 90.9 |
MsG0680033223.01.T01 | MTR_5g046290 | 28.448 | 348 | 166 | 16 | 39 | 371 | 4 | 283 | 7.73e-20 | 90.9 |
MsG0680033223.01.T01 | MTR_3g011100 | 25.575 | 348 | 211 | 11 | 39 | 383 | 235 | 537 | 8.93e-20 | 92.4 |
MsG0680033223.01.T01 | MTR_4g061340 | 25.066 | 379 | 216 | 13 | 39 | 408 | 26 | 345 | 1.03e-19 | 90.9 |
MsG0680033223.01.T01 | MTR_4g107820 | 27.320 | 388 | 208 | 18 | 39 | 415 | 36 | 360 | 1.08e-19 | 90.9 |
MsG0680033223.01.T01 | MTR_4g107780 | 27.320 | 388 | 208 | 18 | 39 | 415 | 36 | 360 | 1.08e-19 | 90.9 |
MsG0680033223.01.T01 | MTR_4g107780 | 27.320 | 388 | 208 | 18 | 39 | 415 | 36 | 360 | 1.23e-19 | 91.3 |
MsG0680033223.01.T01 | MTR_4g107820 | 27.320 | 388 | 208 | 18 | 39 | 415 | 36 | 360 | 1.27e-19 | 90.9 |
MsG0680033223.01.T01 | MTR_0667s0010 | 24.541 | 436 | 256 | 17 | 37 | 449 | 4 | 389 | 1.54e-19 | 90.9 |
MsG0680033223.01.T01 | MTR_5g074870 | 49.000 | 100 | 51 | 0 | 1 | 100 | 44 | 143 | 2.01e-19 | 85.1 |
MsG0680033223.01.T01 | MTR_1g054575 | 27.463 | 335 | 178 | 14 | 38 | 366 | 51 | 326 | 2.86e-19 | 91.3 |
MsG0680033223.01.T01 | MTR_3g034130 | 27.027 | 370 | 190 | 15 | 39 | 386 | 9 | 320 | 3.41e-19 | 89.4 |
MsG0680033223.01.T01 | MTR_5g007610 | 27.714 | 350 | 182 | 14 | 39 | 371 | 41 | 336 | 4.75e-19 | 89.4 |
MsG0680033223.01.T01 | MTR_6g027910 | 25.000 | 412 | 245 | 15 | 43 | 440 | 13 | 374 | 5.34e-19 | 89.0 |
MsG0680033223.01.T01 | MTR_3g083640 | 27.273 | 341 | 185 | 14 | 39 | 374 | 55 | 337 | 6.04e-19 | 89.0 |
MsG0680033223.01.T01 | MTR_3g010430 | 26.478 | 389 | 190 | 16 | 39 | 404 | 36 | 351 | 6.71e-19 | 89.0 |
MsG0680033223.01.T01 | MTR_3g006570 | 26.866 | 335 | 193 | 13 | 39 | 371 | 21 | 305 | 6.86e-19 | 88.6 |
MsG0680033223.01.T01 | MTR_3g036430 | 24.324 | 370 | 197 | 12 | 39 | 407 | 20 | 307 | 6.96e-19 | 88.2 |
MsG0680033223.01.T01 | MTR_2g021150 | 26.478 | 423 | 231 | 19 | 38 | 443 | 13 | 372 | 1.16e-18 | 87.8 |
MsG0680033223.01.T01 | MTR_2g047832 | 25.320 | 391 | 239 | 14 | 34 | 412 | 24 | 373 | 1.23e-18 | 88.2 |
MsG0680033223.01.T01 | MTR_2g046800 | 24.747 | 396 | 234 | 15 | 38 | 412 | 13 | 365 | 2.08e-18 | 87.4 |
MsG0680033223.01.T01 | MTR_3g014570 | 26.379 | 417 | 225 | 20 | 39 | 440 | 29 | 378 | 2.83e-18 | 86.7 |
MsG0680033223.01.T01 | MTR_3g007430 | 26.901 | 342 | 189 | 13 | 42 | 377 | 46 | 332 | 2.89e-18 | 86.7 |
MsG0680033223.01.T01 | MTR_1g017970 | 38.462 | 169 | 60 | 6 | 1 | 169 | 1 | 125 | 4.72e-18 | 80.5 |
MsG0680033223.01.T01 | MTR_1g112930 | 27.027 | 333 | 180 | 13 | 39 | 366 | 25 | 299 | 5.69e-18 | 85.9 |
MsG0680033223.01.T01 | MTR_4g031770 | 26.036 | 338 | 193 | 13 | 39 | 371 | 4 | 289 | 5.88e-18 | 85.5 |
MsG0680033223.01.T01 | MTR_3g036290 | 25.641 | 390 | 222 | 16 | 38 | 423 | 21 | 346 | 8.06e-18 | 85.1 |
MsG0680033223.01.T01 | MTR_6g048140 | 26.810 | 373 | 212 | 15 | 39 | 403 | 39 | 358 | 9.47e-18 | 85.5 |
MsG0680033223.01.T01 | MTR_3g013740 | 26.744 | 344 | 196 | 13 | 39 | 371 | 44 | 342 | 1.11e-17 | 85.1 |
MsG0680033223.01.T01 | MTR_3g013770 | 27.324 | 355 | 194 | 15 | 34 | 377 | 28 | 329 | 1.51e-17 | 84.7 |
MsG0680033223.01.T01 | MTR_7g061060 | 25.419 | 358 | 186 | 12 | 39 | 371 | 13 | 314 | 1.74e-17 | 84.3 |
MsG0680033223.01.T01 | MTR_6g065980 | 25.294 | 340 | 178 | 11 | 39 | 371 | 16 | 286 | 1.91e-17 | 84.0 |
MsG0680033223.01.T01 | MTR_7g061050 | 26.010 | 396 | 201 | 15 | 39 | 403 | 13 | 347 | 2.31e-17 | 84.0 |
MsG0680033223.01.T01 | MTR_4g023080 | 25.816 | 337 | 180 | 14 | 39 | 368 | 9 | 282 | 2.62e-17 | 83.6 |
MsG0680033223.01.T01 | MTR_7g057270 | 25.275 | 364 | 192 | 14 | 38 | 371 | 25 | 338 | 4.28e-17 | 83.6 |
MsG0680033223.01.T01 | MTR_3g034180 | 24.250 | 400 | 228 | 13 | 3 | 385 | 92 | 433 | 4.62e-17 | 84.0 |
MsG0680033223.01.T01 | MTR_2g021190 | 26.761 | 355 | 197 | 16 | 26 | 371 | 8 | 308 | 4.81e-17 | 82.8 |
MsG0680033223.01.T01 | MTR_6g053240 | 26.901 | 342 | 192 | 15 | 39 | 371 | 28 | 320 | 4.85e-17 | 83.2 |
MsG0680033223.01.T01 | MTR_2g046900 | 26.824 | 425 | 234 | 20 | 34 | 442 | 23 | 386 | 5.04e-17 | 83.2 |
MsG0680033223.01.T01 | MTR_5g057790 | 27.273 | 341 | 184 | 17 | 39 | 371 | 46 | 330 | 5.22e-17 | 83.2 |
MsG0680033223.01.T01 | MTR_6g013270 | 26.176 | 340 | 196 | 14 | 38 | 371 | 28 | 318 | 5.56e-17 | 82.8 |
MsG0680033223.01.T01 | MTR_3g013950 | 26.632 | 383 | 222 | 14 | 36 | 399 | 3 | 345 | 6.52e-17 | 82.8 |
MsG0680033223.01.T01 | MTR_2g025420 | 26.234 | 385 | 224 | 15 | 37 | 400 | 4 | 349 | 7.59e-17 | 82.8 |
MsG0680033223.01.T01 | MTR_1g094210 | 25.731 | 342 | 181 | 13 | 38 | 371 | 56 | 332 | 8.30e-17 | 82.4 |
MsG0680033223.01.T01 | MTR_7g013590 | 26.039 | 457 | 256 | 20 | 8 | 440 | 5 | 403 | 1.13e-16 | 82.0 |
MsG0680033223.01.T01 | MTR_1g094210 | 25.731 | 342 | 181 | 13 | 38 | 371 | 56 | 332 | 1.28e-16 | 82.0 |
MsG0680033223.01.T01 | MTR_1g050542 | 24.533 | 375 | 201 | 16 | 38 | 398 | 57 | 363 | 2.08e-16 | 81.3 |
MsG0680033223.01.T01 | MTR_6g053260 | 27.059 | 340 | 189 | 14 | 39 | 371 | 337 | 624 | 6.47e-16 | 80.9 |
MsG0680033223.01.T01 | MTR_6g007135 | 27.586 | 348 | 186 | 16 | 36 | 369 | 23 | 318 | 1.23e-15 | 79.0 |
MsG0680033223.01.T01 | MTR_2g055970 | 26.024 | 415 | 229 | 18 | 39 | 440 | 211 | 560 | 1.25e-15 | 79.7 |
MsG0680033223.01.T01 | MTR_7g017040 | 25.956 | 366 | 202 | 16 | 39 | 379 | 16 | 337 | 1.36e-15 | 79.0 |
MsG0680033223.01.T01 | MTR_7g056717 | 23.690 | 439 | 228 | 16 | 38 | 442 | 22 | 387 | 2.04e-15 | 78.2 |
MsG0680033223.01.T01 | MTR_4g109270 | 26.685 | 356 | 196 | 15 | 39 | 385 | 8 | 307 | 2.19e-15 | 77.8 |
MsG0680033223.01.T01 | MTR_3g058440 | 29.514 | 288 | 161 | 13 | 39 | 319 | 35 | 287 | 2.49e-15 | 77.0 |
MsG0680033223.01.T01 | MTR_3g009240 | 25.745 | 369 | 204 | 15 | 39 | 399 | 36 | 342 | 3.33e-15 | 77.4 |
MsG0680033223.01.T01 | MTR_7g056820 | 25.401 | 374 | 223 | 13 | 38 | 399 | 6 | 335 | 4.94e-15 | 77.0 |
MsG0680033223.01.T01 | MTR_3g030330 | 24.189 | 339 | 189 | 13 | 39 | 371 | 20 | 296 | 5.72e-15 | 76.6 |
MsG0680033223.01.T01 | MTR_7g061090 | 25.434 | 346 | 213 | 14 | 39 | 371 | 22 | 335 | 6.00e-15 | 77.0 |
MsG0680033223.01.T01 | MTR_0044s0300 | 26.744 | 344 | 179 | 14 | 39 | 371 | 38 | 319 | 6.99e-15 | 76.6 |
MsG0680033223.01.T01 | MTR_6g017280 | 24.928 | 345 | 208 | 14 | 38 | 371 | 8 | 312 | 9.26e-15 | 76.3 |
MsG0680033223.01.T01 | MTR_3g024150 | 26.023 | 342 | 185 | 15 | 36 | 371 | 37 | 316 | 1.42e-14 | 75.5 |
MsG0680033223.01.T01 | MTR_2g034700 | 24.054 | 370 | 230 | 13 | 39 | 405 | 14 | 335 | 1.52e-14 | 75.5 |
MsG0680033223.01.T01 | MTR_8g467140 | 26.113 | 337 | 188 | 13 | 39 | 368 | 32 | 314 | 1.56e-14 | 74.7 |
MsG0680033223.01.T01 | MTR_2g046830 | 25.897 | 390 | 218 | 20 | 34 | 412 | 20 | 349 | 1.63e-14 | 75.5 |
MsG0680033223.01.T01 | MTR_3g011120 | 23.919 | 347 | 211 | 10 | 39 | 374 | 14 | 318 | 1.75e-14 | 75.1 |
MsG0680033223.01.T01 | MTR_5g048160 | 23.967 | 363 | 209 | 12 | 39 | 374 | 4 | 326 | 1.95e-14 | 75.1 |
MsG0680033223.01.T01 | MTR_0267s0050 | 24.474 | 380 | 227 | 13 | 38 | 399 | 6 | 343 | 2.29e-14 | 75.1 |
MsG0680033223.01.T01 | MTR_4g021785 | 24.854 | 342 | 178 | 15 | 39 | 368 | 9 | 283 | 2.51e-14 | 74.7 |
MsG0680033223.01.T01 | MTR_7g060940 | 26.271 | 354 | 192 | 16 | 38 | 372 | 21 | 324 | 3.66e-14 | 74.3 |
MsG0680033223.01.T01 | MTR_2g021252 | 25.513 | 341 | 173 | 17 | 42 | 371 | 50 | 320 | 4.76e-14 | 73.9 |
MsG0680033223.01.T01 | MTR_2g028110 | 23.426 | 397 | 229 | 15 | 39 | 420 | 4 | 340 | 5.21e-14 | 73.9 |
MsG0680033223.01.T01 | MTR_7g056737 | 24.802 | 379 | 215 | 16 | 39 | 399 | 22 | 348 | 5.36e-14 | 73.9 |
MsG0680033223.01.T01 | MTR_5g070080 | 25.074 | 339 | 209 | 12 | 39 | 368 | 10 | 312 | 5.58e-14 | 73.6 |
MsG0680033223.01.T01 | MTR_2g028140 | 25.138 | 362 | 197 | 17 | 39 | 371 | 5 | 321 | 5.97e-14 | 73.9 |
MsG0680033223.01.T01 | MTR_2g426090 | 23.678 | 435 | 259 | 16 | 37 | 449 | 4 | 387 | 6.89e-14 | 73.6 |
MsG0680033223.01.T01 | MTR_7g069550 | 25.490 | 357 | 217 | 15 | 37 | 374 | 12 | 338 | 8.91e-14 | 73.2 |
MsG0680033223.01.T01 | MTR_4g102410 | 26.102 | 295 | 186 | 11 | 33 | 313 | 58 | 334 | 8.92e-14 | 73.6 |
MsG0680033223.01.T01 | MTR_3g058480 | 27.715 | 267 | 146 | 10 | 39 | 294 | 39 | 269 | 9.73e-14 | 72.4 |
MsG0680033223.01.T01 | MTR_2g426020 | 23.325 | 403 | 243 | 12 | 37 | 420 | 4 | 359 | 1.46e-13 | 72.4 |
MsG0680033223.01.T01 | MTR_6g021880 | 24.574 | 411 | 230 | 19 | 50 | 440 | 31 | 381 | 1.60e-13 | 72.4 |
MsG0680033223.01.T01 | MTR_0134s0060 | 26.182 | 275 | 152 | 11 | 37 | 282 | 10 | 262 | 1.69e-13 | 72.4 |
MsG0680033223.01.T01 | MTR_5g070088 | 24.688 | 401 | 234 | 15 | 39 | 411 | 7 | 367 | 1.73e-13 | 72.4 |
MsG0680033223.01.T01 | MTR_2g021050 | 24.219 | 384 | 214 | 14 | 39 | 410 | 5 | 323 | 2.84e-13 | 71.6 |
MsG0680033223.01.T01 | MTR_7g078040 | 25.683 | 366 | 204 | 16 | 38 | 371 | 8 | 337 | 5.26e-13 | 70.9 |
MsG0680033223.01.T01 | MTR_3g083010 | 24.331 | 411 | 245 | 18 | 37 | 420 | 4 | 375 | 6.70e-13 | 70.5 |
MsG0680033223.01.T01 | MTR_3g030240 | 26.347 | 334 | 180 | 15 | 39 | 371 | 40 | 308 | 7.20e-13 | 70.1 |
MsG0680033223.01.T01 | MTR_3g007300 | 25.369 | 339 | 168 | 12 | 39 | 374 | 49 | 305 | 8.18e-13 | 70.1 |
MsG0680033223.01.T01 | MTR_5g096710 | 24.289 | 387 | 203 | 16 | 38 | 400 | 22 | 342 | 9.34e-13 | 70.1 |
MsG0680033223.01.T01 | MTR_2g425980 | 22.365 | 389 | 241 | 11 | 39 | 410 | 5 | 349 | 1.14e-12 | 69.7 |
MsG0680033223.01.T01 | MTR_7g077070 | 25.138 | 362 | 208 | 19 | 38 | 371 | 15 | 341 | 1.27e-12 | 69.7 |
MsG0680033223.01.T01 | MTR_4g024890 | 23.529 | 357 | 192 | 13 | 39 | 371 | 10 | 309 | 1.53e-12 | 69.3 |
MsG0680033223.01.T01 | MTR_8g013010 | 25.275 | 273 | 151 | 10 | 39 | 300 | 54 | 284 | 1.74e-12 | 68.6 |
MsG0680033223.01.T01 | MTR_4g129190 | 21.696 | 401 | 221 | 12 | 39 | 402 | 6 | 350 | 1.76e-12 | 69.3 |
MsG0680033223.01.T01 | MTR_5g057643 | 29.596 | 223 | 115 | 11 | 39 | 258 | 46 | 229 | 2.40e-12 | 67.4 |
MsG0680033223.01.T01 | MTR_7g022600 | 23.743 | 358 | 210 | 13 | 39 | 369 | 23 | 344 | 3.08e-12 | 68.6 |
MsG0680033223.01.T01 | MTR_7g066010 | 24.332 | 374 | 188 | 16 | 30 | 382 | 12 | 311 | 3.61e-12 | 68.2 |
MsG0680033223.01.T01 | MTR_4g109280 | 22.454 | 383 | 220 | 13 | 39 | 403 | 8 | 331 | 3.80e-12 | 67.8 |
MsG0680033223.01.T01 | MTR_7g066850 | 26.038 | 265 | 129 | 9 | 38 | 286 | 22 | 235 | 4.66e-12 | 68.2 |
MsG0680033223.01.T01 | MTR_3g034160 | 24.725 | 364 | 204 | 15 | 39 | 385 | 9 | 319 | 4.75e-12 | 67.8 |
MsG0680033223.01.T01 | MTR_0128s0020 | 23.925 | 372 | 196 | 16 | 38 | 379 | 17 | 331 | 4.81e-12 | 67.8 |
MsG0680033223.01.T01 | MTR_4g030980 | 20.904 | 354 | 246 | 9 | 38 | 371 | 14 | 353 | 4.86e-12 | 68.2 |
MsG0680033223.01.T01 | MTR_1g068875 | 23.016 | 378 | 231 | 12 | 39 | 410 | 4 | 327 | 6.91e-12 | 67.4 |
MsG0680033223.01.T01 | MTR_7g055977 | 23.944 | 355 | 192 | 13 | 39 | 371 | 7 | 305 | 1.15e-11 | 66.6 |
MsG0680033223.01.T01 | MTR_1g055070 | 25.806 | 279 | 173 | 12 | 39 | 307 | 49 | 303 | 1.49e-11 | 66.2 |
MsG0680033223.01.T01 | MTR_7g056760 | 23.462 | 439 | 279 | 15 | 23 | 440 | 2 | 404 | 2.20e-11 | 65.9 |
MsG0680033223.01.T01 | MTR_5g046280 | 27.064 | 218 | 118 | 9 | 161 | 371 | 3 | 186 | 2.35e-11 | 64.3 |
MsG0680033223.01.T01 | MTR_2g043420 | 34.586 | 133 | 62 | 6 | 38 | 168 | 25 | 134 | 2.49e-11 | 62.4 |
MsG0680033223.01.T01 | MTR_4g030830 | 22.951 | 427 | 264 | 16 | 38 | 440 | 8 | 393 | 2.78e-11 | 65.5 |
MsG0680033223.01.T01 | MTR_8g046200 | 25.000 | 396 | 205 | 18 | 20 | 369 | 5 | 354 | 4.10e-11 | 65.1 |
MsG0680033223.01.T01 | MTR_3g058470 | 24.490 | 343 | 173 | 12 | 39 | 371 | 37 | 303 | 4.16e-11 | 64.7 |
MsG0680033223.01.T01 | MTR_8g433030 | 40.777 | 103 | 53 | 2 | 39 | 140 | 40 | 135 | 5.88e-11 | 63.9 |
MsG0680033223.01.T01 | MTR_0464s0020 | 26.462 | 359 | 202 | 17 | 38 | 371 | 22 | 343 | 7.16e-11 | 64.3 |
MsG0680033223.01.T01 | MTR_3g030320 | 27.064 | 218 | 120 | 9 | 159 | 371 | 44 | 227 | 7.78e-11 | 63.5 |
MsG0680033223.01.T01 | MTR_4g019990 | 23.274 | 391 | 230 | 14 | 39 | 404 | 6 | 351 | 8.40e-11 | 63.9 |
MsG0680033223.01.T01 | MTR_5g009060 | 26.074 | 349 | 215 | 14 | 39 | 373 | 25 | 344 | 8.67e-11 | 63.9 |
MsG0680033223.01.T01 | MTR_5g069760 | 23.098 | 368 | 177 | 15 | 39 | 372 | 6 | 301 | 9.61e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033223.01.T01 | AT3G06240 | 27.253 | 455 | 265 | 20 | 10 | 440 | 7 | 419 | 1.77e-26 | 111 |
MsG0680033223.01.T01 | AT3G07870 | 25.916 | 382 | 213 | 13 | 36 | 397 | 25 | 356 | 1.65e-18 | 87.8 |
MsG0680033223.01.T01 | AT1G53550 | 25.959 | 339 | 194 | 16 | 35 | 367 | 31 | 318 | 6.15e-15 | 77.0 |
MsG0680033223.01.T01 | AT1G53370 | 24.723 | 271 | 162 | 8 | 34 | 302 | 23 | 253 | 5.44e-13 | 70.9 |
Find 104 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAAGCCATATTTATCAATT+TGG | 0.171054 | 6:+59859040 | None:intergenic |
GTAAATGTGTGTGCAAAATT+TGG | 0.230841 | 6:-59859815 | MsG0680033223.01.T01:CDS |
TCTCTATTGCAAGCAATATA+AGG | 0.243202 | 6:+59859558 | None:intergenic |
GTTCGAATCATGAGACTAAT+TGG | 0.246505 | 6:+59859741 | None:intergenic |
AATATAAGGTAATACATATT+TGG | 0.267747 | 6:-59859332 | MsG0680033223.01.T01:CDS |
AATGACACGGTTCGTGTAAT+AGG | 0.270939 | 6:-59859393 | MsG0680033223.01.T01:CDS |
TATTAGCATGGGAGAATTAA+AGG | 0.273494 | 6:-59859001 | MsG0680033223.01.T01:CDS |
TCCTAAAACTAATGAATATA+AGG | 0.275555 | 6:-59859346 | MsG0680033223.01.T01:CDS |
GCAGATCACTAAAGGGTTTC+CGG | 0.276169 | 6:+59859473 | None:intergenic |
ACAGTTCAATTACCCTTGTT+AGG | 0.290088 | 6:-59859977 | MsG0680033223.01.T01:CDS |
CAGGACCAAATTGATAAATA+TGG | 0.308143 | 6:-59859045 | MsG0680033223.01.T01:CDS |
TACTATGAGCCTAATGAATA+TGG | 0.310016 | 6:-59858769 | MsG0680033223.01.T01:CDS |
ACATGACTGCCAAACGCAAC+TGG | 0.316100 | 6:+59859069 | None:intergenic |
GGCTAGCCAAAGATGCAATA+AGG | 0.321382 | 6:-59859955 | MsG0680033223.01.T01:CDS |
ATAGGACAAGAAGCTGGTTT+TGG | 0.341685 | 6:-59859375 | MsG0680033223.01.T01:CDS |
CTCAATATTGTCTCCTTTCA+CGG | 0.358205 | 6:+59858660 | None:intergenic |
CAAACAAAGCAAGCCATTAC+AGG | 0.370690 | 6:+59859509 | None:intergenic |
CAAATTCTTGGGTATTCTAA+AGG | 0.378154 | 6:-59858733 | MsG0680033223.01.T01:CDS |
AGTGATCTGCAACCCATTCA+TGG | 0.389927 | 6:-59859460 | MsG0680033223.01.T01:CDS |
ATGTGGGTTATGAATGAATA+TGG | 0.396610 | 6:-59858934 | MsG0680033223.01.T01:CDS |
GATCGCACTCAAGAAGGTAT+AGG | 0.408613 | 6:+59859691 | None:intergenic |
CAAAGATGCAATAAGGGAAA+AGG | 0.411061 | 6:-59859948 | MsG0680033223.01.T01:CDS |
ACAAATGAGAAGAGACTTGA+TGG | 0.428308 | 6:+59859836 | None:intergenic |
CTTCATTGGATCAGATTTGA+GGG | 0.430753 | 6:-59859156 | MsG0680033223.01.T01:CDS |
ATCGCACTCAAGAAGGTATA+GGG | 0.440938 | 6:+59859692 | None:intergenic |
TCCAAGTCTAATCTCATTGA+AGG | 0.442216 | 6:-59858686 | MsG0680033223.01.T01:CDS |
GTGTGAATGGTGCACTTCAT+TGG | 0.443289 | 6:-59859170 | MsG0680033223.01.T01:CDS |
CAGTTCAATTACCCTTGTTA+GGG | 0.444386 | 6:-59859976 | MsG0680033223.01.T01:CDS |
AGTATTGTGAATTCCTGTAA+TGG | 0.445864 | 6:-59859522 | MsG0680033223.01.T01:CDS |
AGACATGAAAATGAAATTTG+AGG | 0.447128 | 6:+59859207 | None:intergenic |
CGAAGAGGAAGCCTGAATAT+AGG | 0.448133 | 6:+59859624 | None:intergenic |
ATTAGCATGGGAGAATTAAA+GGG | 0.449576 | 6:-59859000 | MsG0680033223.01.T01:CDS |
TGCGTTTGGCAGTCATGTCC+AGG | 0.449619 | 6:-59859064 | MsG0680033223.01.T01:CDS |
AATTAGATTCTTACCTTGAG+TGG | 0.450866 | 6:+59858626 | None:intergenic |
TGAAGCTTGAGCCTATATTC+AGG | 0.453785 | 6:-59859635 | MsG0680033223.01.T01:CDS |
ACTAAAGGGTTTCCGGTAGT+TGG | 0.453956 | 6:+59859480 | None:intergenic |
CTCTATTGCAAGCAATATAA+GGG | 0.460492 | 6:+59859559 | None:intergenic |
GATCCTGAAAAGTTTGAGAT+TGG | 0.461475 | 6:-59859672 | MsG0680033223.01.T01:CDS |
ATTACACGAACCGTGTCATT+CGG | 0.466156 | 6:+59859396 | None:intergenic |
ATGAATCCCACTTGTGTGAA+TGG | 0.466445 | 6:-59859183 | MsG0680033223.01.T01:CDS |
GCTAGCCAAAGATGCAATAA+GGG | 0.468402 | 6:-59859954 | MsG0680033223.01.T01:CDS |
ATATTCAGGCTTCCTCTTCG+TGG | 0.472954 | 6:-59859621 | MsG0680033223.01.T01:CDS |
ATGTGGGCGGTGAGGTGGGA+TGG | 0.491526 | 6:+59859873 | None:intergenic |
AATGGGTTGCAGATCACTAA+AGG | 0.491916 | 6:+59859465 | None:intergenic |
CATATTTATCAATTTGGTCC+TGG | 0.492897 | 6:+59859046 | None:intergenic |
GTGATCTGCAACCCATTCAT+GGG | 0.493175 | 6:-59859459 | MsG0680033223.01.T01:CDS |
CATTGGAGAATCATGGACTA+AGG | 0.493487 | 6:-59858911 | MsG0680033223.01.T01:CDS |
AACTTGACTCCATATTCATT+AGG | 0.495500 | 6:+59858760 | None:intergenic |
TCCTTCAATGAGATTAGACT+TGG | 0.497436 | 6:+59858685 | None:intergenic |
ATGGGTTGCAGATCACTAAA+GGG | 0.499946 | 6:+59859466 | None:intergenic |
ACTTCATTGGATCAGATTTG+AGG | 0.504033 | 6:-59859157 | MsG0680033223.01.T01:CDS |
CATGACTGCCAAACGCAACT+GGG | 0.509050 | 6:+59859070 | None:intergenic |
AAAGATGCAATAAGGGAAAA+GGG | 0.510305 | 6:-59859947 | MsG0680033223.01.T01:CDS |
GAGATTAGACTTGGAATATG+TGG | 0.511414 | 6:+59858694 | None:intergenic |
TGTTTGTCTCAACCAACTAC+CGG | 0.512691 | 6:-59859492 | MsG0680033223.01.T01:CDS |
TTGGATCAGATTTGAGGGAA+AGG | 0.514735 | 6:-59859151 | MsG0680033223.01.T01:CDS |
ACATTGATATTTCTCCATGT+TGG | 0.515176 | 6:+59859234 | None:intergenic |
ATCTTTGGCTAGCCCTAACA+AGG | 0.516533 | 6:+59859964 | None:intergenic |
ATACGAACGGTAGTAGCTTC+AGG | 0.534267 | 6:+59859420 | None:intergenic |
CAGAATGTGGGCGGTGAGGT+GGG | 0.534960 | 6:+59859869 | None:intergenic |
AAAGGATTACGCCACGCTAA+AGG | 0.539138 | 6:+59858862 | None:intergenic |
TTTCAGGATCGCACTCAAGA+AGG | 0.539810 | 6:+59859685 | None:intergenic |
GCAGAATGTGGGCGGTGAGG+TGG | 0.542760 | 6:+59859868 | None:intergenic |
CCGGTAAAACACTTTGAAGA+GGG | 0.547837 | 6:-59858832 | MsG0680033223.01.T01:CDS |
ATGCTAATATGTATGTTACT+TGG | 0.548079 | 6:+59859015 | None:intergenic |
CGTTCGTATGCCGAATGACA+CGG | 0.548124 | 6:-59859406 | MsG0680033223.01.T01:CDS |
GGGAAAAGGGAAAGTTGAGG+AGG | 0.548932 | 6:-59859934 | MsG0680033223.01.T01:CDS |
AATATGGCATTGGAGAATCA+TGG | 0.555886 | 6:-59858918 | MsG0680033223.01.T01:CDS |
ATAAGGTAATACATATTTGG+AGG | 0.557384 | 6:-59859329 | MsG0680033223.01.T01:CDS |
CCTTAAAATATGTTACAATG+TGG | 0.560424 | 6:-59858951 | MsG0680033223.01.T01:CDS |
CTTAAAATATGTTACAATGT+GGG | 0.567922 | 6:-59858950 | MsG0680033223.01.T01:CDS |
GTTATGAATGAATATGGCAT+TGG | 0.576286 | 6:-59858928 | MsG0680033223.01.T01:CDS |
TCATTGAAGGATGCCGTGAA+AGG | 0.577533 | 6:-59858673 | MsG0680033223.01.T01:CDS |
AAGTGCACCATTCACACAAG+TGG | 0.585491 | 6:+59859176 | None:intergenic |
AAGTAACATACATATTAGCA+TGG | 0.586965 | 6:-59859013 | MsG0680033223.01.T01:CDS |
TCCGGTAAAACACTTTGAAG+AGG | 0.588102 | 6:-59858833 | MsG0680033223.01.T01:CDS |
GAACACATGCTCAGAGTCTG+AGG | 0.588141 | 6:+59859284 | None:intergenic |
CGTGTAATAGGACAAGAAGC+TGG | 0.589080 | 6:-59859381 | MsG0680033223.01.T01:CDS |
AAGTGTAATTTAGCAAAATG+TGG | 0.592030 | 6:+59859774 | None:intergenic |
CGTGTCATTCGGCATACGAA+CGG | 0.595562 | 6:+59859407 | None:intergenic |
GTGGTGATGTCAAATCACTT+AGG | 0.608927 | 6:-59859602 | MsG0680033223.01.T01:CDS |
CAAATGAGAAGAGACTTGAT+GGG | 0.614627 | 6:+59859837 | None:intergenic |
CGAGTGTGTGTATCTCAACA+AGG | 0.616725 | 6:+59859262 | None:intergenic |
AGGTGTTGAATATCCACTCA+AGG | 0.621823 | 6:-59858639 | MsG0680033223.01.T01:CDS |
ATGACTGCCAAACGCAACTG+GGG | 0.623534 | 6:+59859071 | None:intergenic |
CTTGTTGAGATACACACACT+CGG | 0.625865 | 6:-59859261 | MsG0680033223.01.T01:CDS |
AGTAACATACATATTAGCAT+GGG | 0.629764 | 6:-59859012 | MsG0680033223.01.T01:CDS |
ACACACTCGGAACACCAACA+TGG | 0.640562 | 6:-59859248 | MsG0680033223.01.T01:CDS |
TGGGAAGTTGAAGCAGAATG+TGG | 0.646067 | 6:+59859856 | None:intergenic |
CTTTGTACAATCCTTTAGCG+TGG | 0.648053 | 6:-59858873 | MsG0680033223.01.T01:CDS |
TGATCTGCAACCCATTCATG+GGG | 0.648933 | 6:-59859458 | MsG0680033223.01.T01:CDS |
CGTGAAAGGAGACAATATTG+AGG | 0.654299 | 6:-59858659 | MsG0680033223.01.T01:CDS |
TGTGTGTGCAAAATTTGGAA+AGG | 0.655005 | 6:-59859810 | MsG0680033223.01.T01:CDS |
GATTTGACATCACCACGAAG+AGG | 0.658795 | 6:+59859609 | None:intergenic |
AGTGCACCATTCACACAAGT+GGG | 0.658959 | 6:+59859177 | None:intergenic |
GGGAAGTTGAAGCAGAATGT+GGG | 0.674863 | 6:+59859857 | None:intergenic |
TAAGGGAAAAGGGAAAGTTG+AGG | 0.683713 | 6:-59859937 | MsG0680033223.01.T01:CDS |
TGACTGCCAAACGCAACTGG+GGG | 0.688123 | 6:+59859072 | None:intergenic |
GATTGTACAAAGTATCAATG+TGG | 0.712500 | 6:+59858884 | None:intergenic |
AACATGGAGAAATATCAATG+TGG | 0.716841 | 6:-59859232 | MsG0680033223.01.T01:CDS |
GAAGCAGAATGTGGGCGGTG+AGG | 0.717628 | 6:+59859865 | None:intergenic |
AAGTTGAAGCAGAATGTGGG+CGG | 0.739091 | 6:+59859860 | None:intergenic |
TCTTTGGCTAGCCCTAACAA+GGG | 0.778460 | 6:+59859965 | None:intergenic |
GATCTGCAACCCATTCATGG+GGG | 0.787368 | 6:-59859457 | MsG0680033223.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATAAGGTAATACATATT+TGG | - | Chr6:59859294-59859313 | MsG0680033223.01.T01:CDS | 15.0% |
!! | AAAAGCCATATTTATCAATT+TGG | + | Chr6:59859589-59859608 | None:intergenic | 20.0% |
!! | CTTAAAATATGTTACAATGT+GGG | - | Chr6:59859676-59859695 | MsG0680033223.01.T01:CDS | 20.0% |
!! | TCCTAAAACTAATGAATATA+AGG | - | Chr6:59859280-59859299 | MsG0680033223.01.T01:CDS | 20.0% |
!!! | ACCTTATATTCATTAGTTTT+AGG | + | Chr6:59859284-59859303 | None:intergenic | 20.0% |
!!! | TCAAGTTTTTTCAAATTCTT+GGG | - | Chr6:59859882-59859901 | MsG0680033223.01.T01:CDS | 20.0% |
! | AAGTAACATACATATTAGCA+TGG | - | Chr6:59859613-59859632 | MsG0680033223.01.T01:CDS | 25.0% |
! | AAGTGTAATTTAGCAAAATG+TGG | + | Chr6:59858855-59858874 | None:intergenic | 25.0% |
! | AGACATGAAAATGAAATTTG+AGG | + | Chr6:59859422-59859441 | None:intergenic | 25.0% |
! | AGTAACATACATATTAGCAT+GGG | - | Chr6:59859614-59859633 | MsG0680033223.01.T01:CDS | 25.0% |
! | ATAAGGTAATACATATTTGG+AGG | - | Chr6:59859297-59859316 | MsG0680033223.01.T01:CDS | 25.0% |
! | ATGCTAATATGTATGTTACT+TGG | + | Chr6:59859614-59859633 | None:intergenic | 25.0% |
! | CCTTAAAATATGTTACAATG+TGG | - | Chr6:59859675-59859694 | MsG0680033223.01.T01:CDS | 25.0% |
!! | CCACATTGTAACATATTTTA+AGG | + | Chr6:59859678-59859697 | None:intergenic | 25.0% |
!!! | GTCAAGTTTTTTCAAATTCT+TGG | - | Chr6:59859881-59859900 | MsG0680033223.01.T01:CDS | 25.0% |
AAAGATGCAATAAGGGAAAA+GGG | - | Chr6:59858679-59858698 | MsG0680033223.01.T01:CDS | 30.0% | |
AACATGGAGAAATATCAATG+TGG | - | Chr6:59859394-59859413 | MsG0680033223.01.T01:CDS | 30.0% | |
AACTTGACTCCATATTCATT+AGG | + | Chr6:59859869-59859888 | None:intergenic | 30.0% | |
ACATTGATATTTCTCCATGT+TGG | + | Chr6:59859395-59859414 | None:intergenic | 30.0% | |
AGTATTGTGAATTCCTGTAA+TGG | - | Chr6:59859104-59859123 | MsG0680033223.01.T01:CDS | 30.0% | |
ATTAGCATGGGAGAATTAAA+GGG | - | Chr6:59859626-59859645 | MsG0680033223.01.T01:CDS | 30.0% | |
CAAATTCTTGGGTATTCTAA+AGG | - | Chr6:59859893-59859912 | MsG0680033223.01.T01:CDS | 30.0% | |
CAGGACCAAATTGATAAATA+TGG | - | Chr6:59859581-59859600 | MsG0680033223.01.T01:CDS | 30.0% | |
CATATTTATCAATTTGGTCC+TGG | + | Chr6:59859583-59859602 | None:intergenic | 30.0% | |
CTCTATTGCAAGCAATATAA+GGG | + | Chr6:59859070-59859089 | None:intergenic | 30.0% | |
GTAAATGTGTGTGCAAAATT+TGG | - | Chr6:59858811-59858830 | MsG0680033223.01.T01:CDS | 30.0% | |
GTTATGAATGAATATGGCAT+TGG | - | Chr6:59859698-59859717 | MsG0680033223.01.T01:CDS | 30.0% | |
TACTATGAGCCTAATGAATA+TGG | - | Chr6:59859857-59859876 | MsG0680033223.01.T01:CDS | 30.0% | |
TATTAGCATGGGAGAATTAA+AGG | - | Chr6:59859625-59859644 | MsG0680033223.01.T01:CDS | 30.0% | |
TCTCTATTGCAAGCAATATA+AGG | + | Chr6:59859071-59859090 | None:intergenic | 30.0% | |
! | ATGTGGGTTATGAATGAATA+TGG | - | Chr6:59859692-59859711 | MsG0680033223.01.T01:CDS | 30.0% |
! | GATTGTACAAAGTATCAATG+TGG | + | Chr6:59859745-59859764 | None:intergenic | 30.0% |
ACAAATGAGAAGAGACTTGA+TGG | + | Chr6:59858793-59858812 | None:intergenic | 35.0% | |
ACAGTTCAATTACCCTTGTT+AGG | - | Chr6:59858649-59858668 | MsG0680033223.01.T01:CDS | 35.0% | |
ACTTCATTGGATCAGATTTG+AGG | - | Chr6:59859469-59859488 | MsG0680033223.01.T01:CDS | 35.0% | |
CAAAGATGCAATAAGGGAAA+AGG | - | Chr6:59858678-59858697 | MsG0680033223.01.T01:CDS | 35.0% | |
CAAATGAGAAGAGACTTGAT+GGG | + | Chr6:59858792-59858811 | None:intergenic | 35.0% | |
CAGTTCAATTACCCTTGTTA+GGG | - | Chr6:59858650-59858669 | MsG0680033223.01.T01:CDS | 35.0% | |
CTCAATATTGTCTCCTTTCA+CGG | + | Chr6:59859969-59859988 | None:intergenic | 35.0% | |
CTTCATTGGATCAGATTTGA+GGG | - | Chr6:59859470-59859489 | MsG0680033223.01.T01:CDS | 35.0% | |
GAGATTAGACTTGGAATATG+TGG | + | Chr6:59859935-59859954 | None:intergenic | 35.0% | |
GTTCGAATCATGAGACTAAT+TGG | + | Chr6:59858888-59858907 | None:intergenic | 35.0% | |
TCCAAGTCTAATCTCATTGA+AGG | - | Chr6:59859940-59859959 | MsG0680033223.01.T01:CDS | 35.0% | |
TCCTTCAATGAGATTAGACT+TGG | + | Chr6:59859944-59859963 | None:intergenic | 35.0% | |
TGTGTGTGCAAAATTTGGAA+AGG | - | Chr6:59858816-59858835 | MsG0680033223.01.T01:CDS | 35.0% | |
! | AATATGGCATTGGAGAATCA+TGG | - | Chr6:59859708-59859727 | MsG0680033223.01.T01:CDS | 35.0% |
! | CTTCCAATCTCAAACTTTTC+AGG | + | Chr6:59858960-59858979 | None:intergenic | 35.0% |
! | CTTTTCCCTTATTGCATCTT+TGG | + | Chr6:59858680-59858699 | None:intergenic | 35.0% |
! | GATCCTGAAAAGTTTGAGAT+TGG | - | Chr6:59858954-59858973 | MsG0680033223.01.T01:CDS | 35.0% |
! | TGTTTTACCGGAAAACACAA+AGG | + | Chr6:59859785-59859804 | None:intergenic | 35.0% |
!!! | GTTTTTGTTTTGACAGTGAG+AGG | - | Chr6:59859513-59859532 | MsG0680033223.01.T01:CDS | 35.0% |
AATGACACGGTTCGTGTAAT+AGG | - | Chr6:59859233-59859252 | MsG0680033223.01.T01:CDS | 40.0% | |
ATGAATCCCACTTGTGTGAA+TGG | - | Chr6:59859443-59859462 | MsG0680033223.01.T01:CDS | 40.0% | |
CAAACAAAGCAAGCCATTAC+AGG | + | Chr6:59859120-59859139 | None:intergenic | 40.0% | |
CGTGAAAGGAGACAATATTG+AGG | - | Chr6:59859967-59859986 | MsG0680033223.01.T01:CDS | 40.0% | |
CTTGTTGAGATACACACACT+CGG | - | Chr6:59859365-59859384 | MsG0680033223.01.T01:CDS | 40.0% | |
CTTTGTACAATCCTTTAGCG+TGG | - | Chr6:59859753-59859772 | MsG0680033223.01.T01:CDS | 40.0% | |
GCTAGCCAAAGATGCAATAA+GGG | - | Chr6:59858672-59858691 | MsG0680033223.01.T01:CDS | 40.0% | |
TAAGGGAAAAGGGAAAGTTG+AGG | - | Chr6:59858689-59858708 | MsG0680033223.01.T01:CDS | 40.0% | |
TGAAGCTTGAGCCTATATTC+AGG | - | Chr6:59858991-59859010 | MsG0680033223.01.T01:CDS | 40.0% | |
TGTTTGTCTCAACCAACTAC+CGG | - | Chr6:59859134-59859153 | MsG0680033223.01.T01:CDS | 40.0% | |
TTATGAACTCCCCCATGAAT+GGG | + | Chr6:59859181-59859200 | None:intergenic | 40.0% | |
TTGGATCAGATTTGAGGGAA+AGG | - | Chr6:59859475-59859494 | MsG0680033223.01.T01:CDS | 40.0% | |
! | ATCGCACTCAAGAAGGTATA+GGG | + | Chr6:59858937-59858956 | None:intergenic | 40.0% |
! | ATGGGTTGCAGATCACTAAA+GGG | + | Chr6:59859163-59859182 | None:intergenic | 40.0% |
! | ATTACACGAACCGTGTCATT+CGG | + | Chr6:59859233-59859252 | None:intergenic | 40.0% |
! | CATTGGAGAATCATGGACTA+AGG | - | Chr6:59859715-59859734 | MsG0680033223.01.T01:CDS | 40.0% |
! | CCGGTAAAACACTTTGAAGA+GGG | - | Chr6:59859794-59859813 | MsG0680033223.01.T01:CDS | 40.0% |
! | GCGTAATCCTTTGTGTTTTC+CGG | - | Chr6:59859775-59859794 | MsG0680033223.01.T01:CDS | 40.0% |
! | GTGGTGATGTCAAATCACTT+AGG | - | Chr6:59859024-59859043 | MsG0680033223.01.T01:CDS | 40.0% |
! | TCCGGTAAAACACTTTGAAG+AGG | - | Chr6:59859793-59859812 | MsG0680033223.01.T01:CDS | 40.0% |
!! | AATGGGTTGCAGATCACTAA+AGG | + | Chr6:59859164-59859183 | None:intergenic | 40.0% |
!! | AGGTGTTGAATATCCACTCA+AGG | - | Chr6:59859987-59860006 | MsG0680033223.01.T01:CDS | 40.0% |
!! | ATAGGACAAGAAGCTGGTTT+TGG | - | Chr6:59859251-59859270 | MsG0680033223.01.T01:CDS | 40.0% |
!! | CCCTCTTCAAAGTGTTTTAC+CGG | + | Chr6:59859797-59859816 | None:intergenic | 40.0% |
AAAGGATTACGCCACGCTAA+AGG | + | Chr6:59859767-59859786 | None:intergenic | 45.0% | |
AAGTGCACCATTCACACAAG+TGG | + | Chr6:59859453-59859472 | None:intergenic | 45.0% | |
AAGTTGAAGCAGAATGTGGG+CGG | + | Chr6:59858769-59858788 | None:intergenic | 45.0% | |
ACTAAAGGGTTTCCGGTAGT+TGG | + | Chr6:59859149-59859168 | None:intergenic | 45.0% | |
AGTGATCTGCAACCCATTCA+TGG | - | Chr6:59859166-59859185 | MsG0680033223.01.T01:CDS | 45.0% | |
AGTGCACCATTCACACAAGT+GGG | + | Chr6:59859452-59859471 | None:intergenic | 45.0% | |
ATACGAACGGTAGTAGCTTC+AGG | + | Chr6:59859209-59859228 | None:intergenic | 45.0% | |
ATATTCAGGCTTCCTCTTCG+TGG | - | Chr6:59859005-59859024 | MsG0680033223.01.T01:CDS | 45.0% | |
CGAAGAGGAAGCCTGAATAT+AGG | + | Chr6:59859005-59859024 | None:intergenic | 45.0% | |
CGAGTGTGTGTATCTCAACA+AGG | + | Chr6:59859367-59859386 | None:intergenic | 45.0% | |
CGTGTAATAGGACAAGAAGC+TGG | - | Chr6:59859245-59859264 | MsG0680033223.01.T01:CDS | 45.0% | |
CTTATGAACTCCCCCATGAA+TGG | + | Chr6:59859182-59859201 | None:intergenic | 45.0% | |
GATTTGACATCACCACGAAG+AGG | + | Chr6:59859020-59859039 | None:intergenic | 45.0% | |
GCAGATCACTAAAGGGTTTC+CGG | + | Chr6:59859156-59859175 | None:intergenic | 45.0% | |
GGGAAGTTGAAGCAGAATGT+GGG | + | Chr6:59858772-59858791 | None:intergenic | 45.0% | |
GTGATCTGCAACCCATTCAT+GGG | - | Chr6:59859167-59859186 | MsG0680033223.01.T01:CDS | 45.0% | |
GTGTGAATGGTGCACTTCAT+TGG | - | Chr6:59859456-59859475 | MsG0680033223.01.T01:CDS | 45.0% | |
TCATTGAAGGATGCCGTGAA+AGG | - | Chr6:59859953-59859972 | MsG0680033223.01.T01:CDS | 45.0% | |
TGATCTGCAACCCATTCATG+GGG | - | Chr6:59859168-59859187 | MsG0680033223.01.T01:CDS | 45.0% | |
TGGGAAGTTGAAGCAGAATG+TGG | + | Chr6:59858773-59858792 | None:intergenic | 45.0% | |
TTTCAGGATCGCACTCAAGA+AGG | + | Chr6:59858944-59858963 | None:intergenic | 45.0% | |
! | ATCTTTGGCTAGCCCTAACA+AGG | + | Chr6:59858665-59858684 | None:intergenic | 45.0% |
! | GATCGCACTCAAGAAGGTAT+AGG | + | Chr6:59858938-59858957 | None:intergenic | 45.0% |
! | GGCTAGCCAAAGATGCAATA+AGG | - | Chr6:59858671-59858690 | MsG0680033223.01.T01:CDS | 45.0% |
! | TCTTTGGCTAGCCCTAACAA+GGG | + | Chr6:59858664-59858683 | None:intergenic | 45.0% |
ACACACTCGGAACACCAACA+TGG | - | Chr6:59859378-59859397 | MsG0680033223.01.T01:CDS | 50.0% | |
ACATGACTGCCAAACGCAAC+TGG | + | Chr6:59859560-59859579 | None:intergenic | 50.0% | |
ATGACTGCCAAACGCAACTG+GGG | + | Chr6:59859558-59859577 | None:intergenic | 50.0% | |
CATGACTGCCAAACGCAACT+GGG | + | Chr6:59859559-59859578 | None:intergenic | 50.0% | |
CGTTCGTATGCCGAATGACA+CGG | - | Chr6:59859220-59859239 | MsG0680033223.01.T01:CDS | 50.0% | |
GAACACATGCTCAGAGTCTG+AGG | + | Chr6:59859345-59859364 | None:intergenic | 50.0% | |
GATCTGCAACCCATTCATGG+GGG | - | Chr6:59859169-59859188 | MsG0680033223.01.T01:CDS | 50.0% | |
GGGAAAAGGGAAAGTTGAGG+AGG | - | Chr6:59858692-59858711 | MsG0680033223.01.T01:CDS | 50.0% | |
! | CGTGTCATTCGGCATACGAA+CGG | + | Chr6:59859222-59859241 | None:intergenic | 50.0% |
TGACTGCCAAACGCAACTGG+GGG | + | Chr6:59859557-59859576 | None:intergenic | 55.0% | |
TGCGTTTGGCAGTCATGTCC+AGG | - | Chr6:59859562-59859581 | MsG0680033223.01.T01:CDS | 55.0% | |
CAGAATGTGGGCGGTGAGGT+GGG | + | Chr6:59858760-59858779 | None:intergenic | 60.0% | |
CCAAACGCAACTGGGGGAGA+GGG | + | Chr6:59859551-59859570 | None:intergenic | 60.0% | |
GAAGCAGAATGTGGGCGGTG+AGG | + | Chr6:59858764-59858783 | None:intergenic | 60.0% | |
ATGTGGGCGGTGAGGTGGGA+TGG | + | Chr6:59858756-59858775 | None:intergenic | 65.0% | |
CCCTCTCCCCCAGTTGCGTT+TGG | - | Chr6:59859548-59859567 | MsG0680033223.01.T01:CDS | 65.0% | |
GCAGAATGTGGGCGGTGAGG+TGG | + | Chr6:59858761-59858780 | None:intergenic | 65.0% | |
GCCAAACGCAACTGGGGGAG+AGG | + | Chr6:59859552-59859571 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 59858636 | 59860012 | 59858636 | ID=MsG0680033223.01;Name=MsG0680033223.01 |
Chr6 | mRNA | 59858636 | 59860012 | 59858636 | ID=MsG0680033223.01.T01;Parent=MsG0680033223.01;Name=MsG0680033223.01.T01;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|458 |
Chr6 | exon | 59858636 | 59860012 | 59858636 | ID=MsG0680033223.01.T01:exon:5482;Parent=MsG0680033223.01.T01 |
Chr6 | CDS | 59858636 | 59860012 | 59858636 | ID=MsG0680033223.01.T01:cds;Parent=MsG0680033223.01.T01 |
Gene Sequence |
Protein sequence |