AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037912.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037912.01.T01 MTR_7g030040 65.289 363 35 6 1 363 1 272 2.47e-140 402
MsG0780037912.01.T01 MTR_5g043160 56.831 366 132 8 6 356 5 359 3.25e-125 368
MsG0780037912.01.T01 MTR_7g445890 45.541 314 123 8 51 356 10 283 2.45e-75 238
MsG0780037912.01.T01 MTR_4g129160 45.723 339 136 10 56 366 6 324 6.00e-75 236
MsG0780037912.01.T01 MTR_6g017280 45.110 317 132 12 55 359 7 293 1.64e-71 228
MsG0780037912.01.T01 MTR_7g035295 43.252 326 113 12 49 356 8 279 1.39e-65 213
MsG0780037912.01.T01 MTR_7g052670 41.061 358 157 13 38 363 8 343 8.07e-64 210
MsG0780037912.01.T01 MTR_7g009265 47.541 244 102 6 118 356 1 223 4.94e-62 202
MsG0780037912.01.T01 MTR_6g017295 47.984 248 102 7 114 356 7 232 1.60e-61 206
MsG0780037912.01.T01 MTR_7g028660 41.250 320 146 13 50 356 4 294 5.51e-61 201
MsG0780037912.01.T01 MTR_7g060940 40.882 340 137 13 36 353 3 300 2.59e-60 199
MsG0780037912.01.T01 MTR_6g055210 40.476 336 147 12 40 356 13 314 3.24e-60 201
MsG0780037912.01.T01 MTR_2g043400 42.320 319 147 12 51 356 17 311 1.08e-59 198
MsG0780037912.01.T01 MTR_0097s0030 40.120 334 141 11 53 365 10 305 2.92e-59 196
MsG0780037912.01.T01 MTR_2g047240 40.120 334 141 11 53 365 10 305 2.92e-59 196
MsG0780037912.01.T01 MTR_6g016285 39.181 342 148 11 40 356 8 314 2.53e-58 196
MsG0780037912.01.T01 MTR_7g091630 40.120 334 142 15 55 363 30 330 2.78e-58 195
MsG0780037912.01.T01 MTR_7g055930 39.039 333 151 12 56 356 12 324 8.57e-58 194
MsG0780037912.01.T01 MTR_2g047892 39.828 349 142 14 29 356 4 305 9.17e-58 193
MsG0780037912.01.T01 MTR_0649s0020 41.121 321 139 13 54 356 8 296 1.48e-57 192
MsG0780037912.01.T01 MTR_2g047200 39.938 323 146 10 51 356 14 305 5.07e-57 191
MsG0780037912.01.T01 MTR_7g057270 39.634 328 151 11 56 363 25 325 2.48e-56 190
MsG0780037912.01.T01 MTR_7g056290 41.121 321 153 14 51 356 16 315 2.59e-56 190
MsG0780037912.01.T01 MTR_7g062060 40.179 336 148 12 48 356 3 312 2.65e-56 189
MsG0780037912.01.T01 MTR_7g055870 39.577 331 152 14 56 356 12 324 3.87e-56 189
MsG0780037912.01.T01 MTR_6g017305 54.945 182 72 5 179 356 6 181 4.11e-56 185
MsG0780037912.01.T01 MTR_3g464500 40.000 315 151 11 52 356 22 308 5.91e-56 188
MsG0780037912.01.T01 MTR_7g062100 41.195 318 145 13 57 363 24 310 1.69e-55 187
MsG0780037912.01.T01 MTR_7g078840 36.826 334 165 11 53 356 6 323 1.87e-55 187
MsG0780037912.01.T01 MTR_7g091640 38.671 331 147 14 55 363 33 329 2.21e-55 186
MsG0780037912.01.T01 MTR_4g030090 39.683 315 160 10 50 356 7 299 9.30e-55 185
MsG0780037912.01.T01 MTR_4g013180 38.978 313 152 11 57 356 11 297 1.72e-54 186
MsG0780037912.01.T01 MTR_1g088120 37.771 323 159 12 53 356 6 305 6.96e-54 183
MsG0780037912.01.T01 MTR_4g030110 39.145 304 147 10 51 340 24 303 7.23e-54 182
MsG0780037912.01.T01 MTR_4g024890 38.080 323 154 14 49 359 2 290 8.32e-54 182
MsG0780037912.01.T01 MTR_3g464470 38.264 311 159 9 52 356 2 285 1.14e-53 182
MsG0780037912.01.T01 MTR_2g010950 37.386 329 144 8 54 356 17 309 1.86e-53 182
MsG0780037912.01.T01 MTR_7g022600 38.988 336 141 13 55 356 21 326 2.44e-53 182
MsG0780037912.01.T01 MTR_5g056020 39.881 336 149 14 51 356 12 324 6.41e-53 182
MsG0780037912.01.T01 MTR_7g055987 40.260 308 141 9 56 356 19 290 7.21e-53 179
MsG0780037912.01.T01 MTR_7g077070 34.694 343 162 11 51 360 10 323 1.29e-52 180
MsG0780037912.01.T01 MTR_3g072470 40.483 331 151 15 46 356 7 311 1.30e-52 180
MsG0780037912.01.T01 MTR_2g043410 40.566 318 146 13 55 356 20 310 1.41e-52 180
MsG0780037912.01.T01 MTR_7g056390 38.906 329 162 13 45 356 5 311 1.63e-52 179
MsG0780037912.01.T01 MTR_4g030790 37.942 311 130 9 50 356 12 263 2.50e-52 177
MsG0780037912.01.T01 MTR_7g050520 38.298 329 136 11 37 348 10 288 3.35e-52 178
MsG0780037912.01.T01 MTR_3g080370 40.580 345 140 15 54 366 18 329 3.72e-52 179
MsG0780037912.01.T01 MTR_7g056200 37.931 319 133 9 53 356 19 287 4.23e-52 177
MsG0780037912.01.T01 MTR_7g061090 37.982 337 165 11 42 356 1 315 9.52e-52 177
MsG0780037912.01.T01 MTR_7g050480 37.910 335 147 11 36 353 3 293 1.23e-51 177
MsG0780037912.01.T01 MTR_4g019990 39.937 318 148 14 53 353 2 293 1.40e-51 176
MsG0780037912.01.T01 MTR_4g030830 39.048 315 152 10 56 356 8 296 1.40e-51 176
MsG0780037912.01.T01 MTR_7g077970 38.365 318 160 12 57 356 7 306 1.66e-51 177
MsG0780037912.01.T01 MTR_7g066850 40.000 325 142 11 38 347 4 290 1.74e-51 178
MsG0780037912.01.T01 MTR_7g061060 38.788 330 138 12 50 356 6 294 2.30e-51 176
MsG0780037912.01.T01 MTR_7g056503 37.152 323 169 11 51 363 15 313 3.70e-51 176
MsG0780037912.01.T01 MTR_7g061050 39.009 323 144 10 50 356 6 291 6.21e-51 174
MsG0780037912.01.T01 MTR_7g079160 37.853 354 162 16 55 366 6 343 8.93e-51 176
MsG0780037912.01.T01 MTR_4g129190 37.304 319 153 10 55 356 4 292 1.32e-50 174
MsG0780037912.01.T01 MTR_8g066440 38.310 355 171 14 26 364 3 325 1.56e-50 174
MsG0780037912.01.T01 MTR_2g461450 38.436 307 145 11 51 356 12 275 1.60e-50 173
MsG0780037912.01.T01 MTR_7g078900 36.364 341 150 14 51 356 5 313 2.21e-50 174
MsG0780037912.01.T01 MTR_0128s0020 39.394 330 126 16 55 356 16 299 2.63e-50 173
MsG0780037912.01.T01 MTR_0464s0020 38.138 333 167 14 45 356 9 323 3.44e-50 174
MsG0780037912.01.T01 MTR_2g010920 37.427 342 152 15 51 356 14 329 4.71e-50 173
MsG0780037912.01.T01 MTR_7g077990 38.291 316 151 13 53 356 13 296 1.02e-49 172
MsG0780037912.01.T01 MTR_7g445750 35.882 340 166 10 49 363 15 327 1.59e-49 169
MsG0780037912.01.T01 MTR_7g052150 35.632 348 168 11 38 366 4 314 1.71e-49 171
MsG0780037912.01.T01 MTR_7g070830 36.648 352 167 16 36 356 3 329 3.71e-49 171
MsG0780037912.01.T01 MTR_7g078040 36.095 338 184 9 52 366 4 332 4.12e-49 171
MsG0780037912.01.T01 MTR_7g056760 37.539 317 146 14 52 347 18 303 7.04e-49 170
MsG0780037912.01.T01 MTR_7g066840 37.538 333 152 13 50 365 16 309 8.55e-49 169
MsG0780037912.01.T01 MTR_0707s0020 35.014 357 168 12 46 356 15 353 1.36e-48 170
MsG0780037912.01.T01 MTR_4g013175 36.858 331 163 14 53 356 6 317 3.18e-48 169
MsG0780037912.01.T01 MTR_7g056260 37.072 321 151 10 49 352 6 292 3.30e-48 166
MsG0780037912.01.T01 MTR_6g086920 35.014 357 168 12 46 356 27 365 3.66e-48 170
MsG0780037912.01.T01 MTR_5g069760 37.380 313 153 10 53 356 2 280 3.86e-48 167
MsG0780037912.01.T01 MTR_7g066100 37.383 321 162 10 50 353 4 302 6.05e-48 167
MsG0780037912.01.T01 MTR_0128s0070 38.485 330 163 14 38 356 2 302 3.47e-47 165
MsG0780037912.01.T01 MTR_2g010900 37.377 305 137 12 75 356 1 274 3.60e-47 165
MsG0780037912.01.T01 MTR_4g033495 38.580 324 149 12 51 356 21 312 4.96e-47 166
MsG0780037912.01.T01 MTR_7g070880 37.313 335 155 16 54 356 18 329 7.48e-47 165
MsG0780037912.01.T01 MTR_5g069930 37.072 321 144 12 55 356 4 285 1.02e-46 163
MsG0780037912.01.T01 MTR_4g030980 36.970 330 161 15 56 352 14 329 1.20e-46 164
MsG0780037912.01.T01 MTR_7g056797 38.585 311 149 13 52 347 18 301 1.25e-46 164
MsG0780037912.01.T01 MTR_7g066030 35.435 333 159 12 49 356 13 314 3.34e-46 162
MsG0780037912.01.T01 MTR_7g056737 39.423 312 148 11 53 356 18 296 4.52e-46 162
MsG0780037912.01.T01 MTR_4g011660 35.854 357 160 15 49 366 11 337 4.85e-46 162
MsG0780037912.01.T01 MTR_0128s0010 37.069 348 166 15 38 366 5 318 5.17e-46 162
MsG0780037912.01.T01 MTR_3g437520 37.901 343 157 15 45 356 9 326 5.29e-46 163
MsG0780037912.01.T01 MTR_0242s0060 35.632 348 159 12 52 366 4 319 7.44e-46 162
MsG0780037912.01.T01 MTR_0242s0040 35.632 348 159 12 52 366 4 319 7.44e-46 162
MsG0780037912.01.T01 MTR_7g056003 38.650 326 138 13 56 356 14 302 1.22e-45 161
MsG0780037912.01.T01 MTR_4g013185 36.728 324 173 12 53 356 6 317 1.43e-45 161
MsG0780037912.01.T01 MTR_4g031020 35.780 327 177 11 52 352 10 329 3.67e-45 160
MsG0780037912.01.T01 MTR_1g071010 36.792 318 160 9 51 356 10 298 5.59e-45 159
MsG0780037912.01.T01 MTR_2g437110 38.080 323 145 13 50 353 15 301 8.76e-45 161
MsG0780037912.01.T01 MTR_7g061010 37.349 332 154 11 36 353 3 294 2.13e-44 157
MsG0780037912.01.T01 MTR_7g078860 35.669 314 162 11 57 354 9 298 2.27e-44 157
MsG0780037912.01.T01 MTR_7g055977 37.700 313 152 11 55 356 5 285 2.94e-44 157
MsG0780037912.01.T01 MTR_6g017270 43.172 227 98 8 55 270 7 213 9.87e-44 154
MsG0780037912.01.T01 MTR_1g442850 35.692 325 161 11 59 366 7 300 8.74e-43 153
MsG0780037912.01.T01 MTR_5g096710 37.662 308 154 11 55 352 21 300 1.40e-42 153
MsG0780037912.01.T01 MTR_7g056717 38.095 315 146 11 54 356 19 296 1.63e-42 152
MsG0780037912.01.T01 MTR_7g060960 37.695 321 135 12 42 356 17 278 3.49e-42 151
MsG0780037912.01.T01 MTR_7g078940 39.550 311 140 14 55 332 30 325 8.28e-42 151
MsG0780037912.01.T01 MTR_7g056570 36.646 322 156 12 44 353 4 289 2.57e-41 150
MsG0780037912.01.T01 MTR_7g066000 35.202 321 158 12 55 356 23 312 3.25e-41 149
MsG0780037912.01.T01 MTR_7g066080 36.449 321 165 12 51 356 10 306 3.69e-41 150
MsG0780037912.01.T01 MTR_2g047878 37.898 314 130 15 45 347 9 268 4.97e-41 148
MsG0780037912.01.T01 MTR_3g013470 36.027 297 151 10 63 352 1 265 7.40e-41 147
MsG0780037912.01.T01 MTR_7g077910 43.590 195 94 7 159 348 37 220 2.27e-40 145
MsG0780037912.01.T01 MTR_7g056710 35.714 322 164 13 44 356 4 291 3.06e-40 146
MsG0780037912.01.T01 MTR_7g056170 35.913 323 140 10 55 333 73 372 1.16e-39 146
MsG0780037912.01.T01 MTR_2g006360 35.311 354 128 14 5 352 7 265 1.30e-39 144
MsG0780037912.01.T01 MTR_4g008790 33.626 342 166 13 46 356 28 339 1.57e-39 146
MsG0780037912.01.T01 MTR_1g015730 34.539 304 158 10 53 348 5 275 6.17e-39 143
MsG0780037912.01.T01 MTR_1g047490 33.631 336 124 15 52 356 17 284 1.06e-38 140
MsG0780037912.01.T01 MTR_7g066010 35.526 304 137 13 49 325 13 284 1.25e-37 139
MsG0780037912.01.T01 MTR_1g112010 36.170 282 128 10 79 356 2 235 2.20e-37 137
MsG0780037912.01.T01 MTR_4g034860 36.395 294 141 13 84 356 49 317 4.89e-37 138
MsG0780037912.01.T01 MTR_6g092560 34.146 328 159 12 51 356 6 298 5.28e-37 139
MsG0780037912.01.T01 MTR_5g068040 33.651 315 140 13 53 348 12 276 1.46e-36 136
MsG0780037912.01.T01 MTR_7g070440 28.990 307 179 8 59 356 9 285 2.73e-36 135
MsG0780037912.01.T01 MTR_7g056820 34.268 321 152 12 56 356 6 287 1.40e-35 134
MsG0780037912.01.T01 MTR_2g029990 34.007 297 149 11 58 346 52 309 1.56e-35 134
MsG0780037912.01.T01 MTR_7g037670 36.700 297 130 11 38 325 5 252 1.76e-35 132
MsG0780037912.01.T01 MTR_7g061100 36.462 277 114 11 50 323 6 223 5.36e-35 131
MsG0780037912.01.T01 MTR_2g021190 34.114 299 150 11 57 347 21 280 6.72e-35 132
MsG0780037912.01.T01 MTR_4g024870 34.783 299 140 12 42 321 35 297 1.29e-34 132
MsG0780037912.01.T01 MTR_2g047895 38.991 218 101 9 156 356 29 231 3.25e-34 129
MsG0780037912.01.T01 MTR_5g011350 36.905 252 116 8 112 359 36 248 7.12e-34 126
MsG0780037912.01.T01 MTR_4g037465 32.288 319 175 10 49 356 13 301 1.75e-33 128
MsG0780037912.01.T01 MTR_2g046920 33.861 316 143 15 57 358 24 287 2.49e-33 127
MsG0780037912.01.T01 MTR_3g014570 32.308 325 162 13 57 366 29 310 3.07e-33 127
MsG0780037912.01.T01 MTR_1g097560 29.940 334 168 10 40 362 19 297 3.20e-33 127
MsG0780037912.01.T01 MTR_3g013740 30.556 324 181 13 57 366 44 337 4.52e-33 127
MsG0780037912.01.T01 MTR_8g101940 36.025 322 137 14 56 356 1 274 5.61e-33 126
MsG0780037912.01.T01 MTR_2g021150 32.343 303 170 12 57 356 14 284 1.07e-32 125
MsG0780037912.01.T01 MTR_6g053260 32.288 319 171 14 57 366 337 619 2.05e-32 129
MsG0780037912.01.T01 MTR_3g014540 32.500 320 168 15 57 366 29 310 2.63e-32 125
MsG0780037912.01.T01 MTR_7g022670 32.075 318 124 10 50 356 19 255 2.77e-32 124
MsG0780037912.01.T01 MTR_3g011060 32.895 304 159 13 57 347 28 299 5.47e-32 124
MsG0780037912.01.T01 MTR_7g038710 79.570 93 19 0 1 93 1 93 6.74e-32 118
MsG0780037912.01.T01 MTR_1g029650 33.766 308 165 11 53 348 4 284 7.75e-32 124
MsG0780037912.01.T01 MTR_7g066060 32.812 320 166 12 57 356 23 313 7.85e-32 125
MsG0780037912.01.T01 MTR_3g011020 31.845 336 169 12 42 366 14 300 9.02e-32 123
MsG0780037912.01.T01 MTR_2g046900 33.333 312 150 12 57 353 28 296 1.14e-31 123
MsG0780037912.01.T01 MTR_3g007270 31.290 310 157 13 56 346 46 318 2.40e-31 123
MsG0780037912.01.T01 MTR_7g056023 31.642 335 153 11 37 366 15 278 2.88e-31 120
MsG0780037912.01.T01 MTR_7g013590 30.303 330 190 9 22 346 1 295 3.13e-31 122
MsG0780037912.01.T01 MTR_3g006670 30.539 334 188 14 41 366 34 331 4.01e-31 122
MsG0780037912.01.T01 MTR_4g030760 31.447 318 151 12 53 356 69 333 5.47e-31 122
MsG0780037912.01.T01 MTR_5g058620 43.836 146 73 4 214 356 33 172 1.03e-30 118
MsG0780037912.01.T01 MTR_1g058870 43.836 146 73 4 214 356 33 172 1.03e-30 118
MsG0780037912.01.T01 MTR_3g007330 31.646 316 169 11 57 366 48 322 1.61e-30 120
MsG0780037912.01.T01 MTR_6g460450 48.201 139 50 2 43 174 15 138 3.26e-30 113
MsG0780037912.01.T01 MTR_1g050542 30.769 338 165 12 21 350 32 308 5.54e-30 119
MsG0780037912.01.T01 MTR_4g061340 30.982 326 168 11 57 366 26 310 5.95e-30 118
MsG0780037912.01.T01 MTR_6g053240 32.308 325 168 15 57 366 28 315 7.35e-30 119
MsG0780037912.01.T01 MTR_7g407070 33.441 311 159 14 57 350 32 311 9.91e-30 118
MsG0780037912.01.T01 MTR_1g015740 31.169 308 123 11 53 356 4 226 4.91e-29 115
MsG0780037912.01.T01 MTR_3g036290 32.667 300 138 15 56 345 21 266 6.45e-29 115
MsG0780037912.01.T01 MTR_7g050490 36.111 216 102 5 51 259 2 188 7.28e-29 110
MsG0780037912.01.T01 MTR_6g065510 38.342 193 97 7 171 356 59 236 1.03e-28 114
MsG0780037912.01.T01 MTR_3g024110 27.964 329 161 10 57 366 101 372 1.44e-28 115
MsG0780037912.01.T01 MTR_3g013770 31.366 322 173 15 57 366 33 318 2.07e-28 114
MsG0780037912.01.T01 MTR_2g047832 31.402 328 155 12 57 358 29 312 2.47e-28 114
MsG0780037912.01.T01 MTR_7g066040 40.678 177 84 8 164 323 25 197 4.45e-28 110
MsG0780037912.01.T01 MTR_8g101580 31.454 337 179 15 24 350 9 303 1.02e-27 112
MsG0780037912.01.T01 MTR_7g055830 36.765 204 94 9 178 356 63 256 1.37e-27 111
MsG0780037912.01.T01 MTR_3g007410 31.661 319 166 14 60 366 55 333 2.25e-27 112
MsG0780037912.01.T01 MTR_4g006350 28.530 347 192 13 32 356 469 781 2.35e-27 114
MsG0780037912.01.T01 MTR_3g009240 30.599 317 172 11 57 366 36 311 2.36e-27 111
MsG0780037912.01.T01 MTR_4g108820 29.747 316 136 11 54 362 39 275 2.79e-27 110
MsG0780037912.01.T01 MTR_3g011100 31.790 324 167 14 57 365 235 519 3.75e-27 113
MsG0780037912.01.T01 MTR_7g055850 38.265 196 90 8 56 228 12 199 4.11e-27 108
MsG0780037912.01.T01 MTR_3g007360 31.230 317 170 13 60 366 55 333 4.92e-27 110
MsG0780037912.01.T01 MTR_6g065980 31.132 318 159 13 57 366 16 281 4.95e-27 110
MsG0780037912.01.T01 MTR_3g009310 30.278 360 179 15 27 366 14 321 4.96e-27 110
MsG0780037912.01.T01 MTR_1g094210 31.169 308 165 13 45 350 47 309 8.12e-27 110
MsG0780037912.01.T01 MTR_1g094210 31.169 308 165 13 45 350 47 309 9.94e-27 110
MsG0780037912.01.T01 MTR_7g055953 41.892 148 63 4 214 356 90 219 2.47e-26 107
MsG0780037912.01.T01 MTR_3g030310 30.699 329 177 11 51 366 15 305 3.04e-26 108
MsG0780037912.01.T01 MTR_1g054575 29.129 333 183 11 20 350 24 305 4.13e-26 110
MsG0780037912.01.T01 MTR_5g011200 29.595 321 176 16 57 365 17 299 4.37e-26 107
MsG0780037912.01.T01 MTR_2g021252 32.550 298 136 16 60 347 50 292 7.37e-26 107
MsG0780037912.01.T01 MTR_2g021155 32.203 295 160 13 60 350 39 297 8.60e-26 109
MsG0780037912.01.T01 MTR_2g021155 28.191 188 103 7 168 347 695 858 2.24e-11 65.9
MsG0780037912.01.T01 MTR_1g097490 31.157 337 173 13 29 352 16 306 8.88e-26 107
MsG0780037912.01.T01 MTR_5g046300 30.640 297 153 14 57 346 4 254 1.07e-25 106
MsG0780037912.01.T01 MTR_5g046290 30.640 297 153 14 57 346 4 254 1.07e-25 106
MsG0780037912.01.T01 MTR_7g113500 35.160 219 118 10 149 356 81 286 1.36e-25 106
MsG0780037912.01.T01 MTR_2g078900 32.215 298 163 12 51 347 26 285 1.52e-25 106
MsG0780037912.01.T01 MTR_3g006530 30.795 302 167 10 57 352 40 305 1.87e-25 106
MsG0780037912.01.T01 MTR_8g467140 29.276 304 170 10 57 355 32 295 2.28e-25 105
MsG0780037912.01.T01 MTR_2g079810 31.399 293 137 13 52 326 2 248 2.38e-25 104
MsG0780037912.01.T01 MTR_2g046830 31.169 308 162 13 57 358 25 288 3.11e-25 105
MsG0780037912.01.T01 MTR_3g013950 31.098 328 163 14 56 356 5 296 3.17e-25 105
MsG0780037912.01.T01 MTR_3g010390 31.546 317 147 14 57 348 33 304 3.41e-25 105
MsG0780037912.01.T01 MTR_5g057790 31.457 302 155 15 57 347 46 306 3.46e-25 105
MsG0780037912.01.T01 MTR_7g056173 42.581 155 68 6 212 356 25 168 3.66e-25 104
MsG0780037912.01.T01 MTR_1g097330 31.646 316 161 14 56 362 15 284 3.71e-25 105
MsG0780037912.01.T01 MTR_2g046800 31.715 309 157 15 56 340 13 291 4.20e-25 105
MsG0780037912.01.T01 MTR_0267s0050 31.715 309 158 12 60 347 9 285 8.27e-25 104
MsG0780037912.01.T01 MTR_3g436150 29.358 327 182 14 57 366 32 326 9.40e-25 104
MsG0780037912.01.T01 MTR_0044s0300 28.746 327 166 15 57 366 38 314 1.00e-24 104
MsG0780037912.01.T01 MTR_3g006570 30.132 302 155 13 57 347 21 277 1.05e-24 103
MsG0780037912.01.T01 MTR_6g088385 40.104 192 86 9 182 356 49 228 1.08e-24 103
MsG0780037912.01.T01 MTR_6g007135 30.159 315 162 13 49 346 18 291 1.55e-24 103
MsG0780037912.01.T01 MTR_6g004660 30.275 327 164 16 42 346 1 285 2.42e-24 103
MsG0780037912.01.T01 MTR_3g058480 33.803 284 147 14 49 324 32 282 2.46e-24 102
MsG0780037912.01.T01 MTR_3g036430 28.814 295 133 9 57 345 20 243 3.55e-24 102
MsG0780037912.01.T01 MTR_7g078960 34.562 217 98 10 171 366 1 194 5.14e-24 100
MsG0780037912.01.T01 MTR_3g030350 28.000 300 161 11 57 348 35 287 6.07e-24 102
MsG0780037912.01.T01 MTR_3g030330 29.538 325 175 11 51 366 12 291 6.35e-24 101
MsG0780037912.01.T01 MTR_5g022420 28.618 304 153 13 57 351 27 275 7.55e-24 101
MsG0780037912.01.T01 MTR_1g056710 30.303 363 174 20 23 365 9 312 9.21e-24 101
MsG0780037912.01.T01 MTR_5g057710 31.169 308 148 15 57 347 46 306 9.94e-24 101
MsG0780037912.01.T01 MTR_4g055060 28.829 333 196 12 44 366 15 316 1.27e-23 101
MsG0780037912.01.T01 MTR_2g055970 29.085 306 168 11 57 355 211 474 2.58e-23 101
MsG0780037912.01.T01 MTR_3g009300 34.783 207 109 7 165 366 98 283 2.84e-23 99.8
MsG0780037912.01.T01 MTR_8g069515 38.636 176 87 6 45 213 3 164 3.44e-23 95.9
MsG0780037912.01.T01 MTR_3g009260 30.503 318 168 11 57 366 41 313 3.57e-23 99.8
MsG0780037912.01.T01 MTR_3g007430 29.154 319 173 10 60 366 46 323 5.02e-23 99.4
MsG0780037912.01.T01 MTR_5g057690 30.272 294 159 10 57 347 46 296 6.78e-23 99.0
MsG0780037912.01.T01 MTR_3g010590 28.963 328 169 12 25 346 12 281 2.17e-22 97.8
MsG0780037912.01.T01 MTR_6g027910 28.528 326 169 15 60 365 12 293 2.67e-22 97.4
MsG0780037912.01.T01 MTR_4g107820 28.322 286 134 11 57 324 36 268 3.21e-22 97.1
MsG0780037912.01.T01 MTR_4g107780 28.322 286 134 11 57 324 36 268 3.21e-22 97.1
MsG0780037912.01.T01 MTR_5g007610 28.472 288 148 11 57 324 41 290 3.73e-22 97.1
MsG0780037912.01.T01 MTR_4g107820 28.322 286 134 11 57 324 36 268 3.74e-22 97.4
MsG0780037912.01.T01 MTR_8g062660 27.907 344 165 11 53 365 18 309 3.99e-22 98.2
MsG0780037912.01.T01 MTR_3g030250 28.475 295 156 12 57 346 37 281 3.99e-22 96.7
MsG0780037912.01.T01 MTR_4g107780 28.322 286 134 11 57 324 36 268 4.32e-22 97.1
MsG0780037912.01.T01 MTR_3g010520 28.383 303 142 11 57 348 25 263 7.85e-22 95.9
MsG0780037912.01.T01 MTR_1g055070 29.474 285 154 11 57 324 49 303 9.29e-22 95.9
MsG0780037912.01.T01 MTR_3g083640 29.940 334 165 14 28 347 28 306 1.64e-21 95.5
MsG0780037912.01.T01 MTR_3g007300 27.457 346 187 10 22 366 15 297 2.47e-21 94.4
MsG0780037912.01.T01 MTR_8g030660 30.224 268 126 12 55 286 25 267 3.15e-21 92.4
MsG0780037912.01.T01 MTR_4g006840 29.044 272 124 10 60 318 2 217 3.25e-21 91.7
MsG0780037912.01.T01 MTR_0760s0010 30.375 293 147 11 62 347 52 294 3.34e-21 94.4
MsG0780037912.01.T01 MTR_4g128320 37.662 154 85 5 184 332 39 186 3.35e-21 92.4
MsG0780037912.01.T01 MTR_3g058470 32.420 219 130 7 48 261 29 234 3.95e-21 94.0
MsG0780037912.01.T01 MTR_7g070937 44.444 126 61 4 212 331 10 132 4.20e-21 89.4
MsG0780037912.01.T01 MTR_3g010970 28.339 307 134 11 60 346 51 291 5.56e-21 93.6
MsG0780037912.01.T01 MTR_5g057020 30.508 295 152 11 57 347 46 291 7.68e-21 92.8
MsG0780037912.01.T01 MTR_3g006500 27.063 303 178 10 57 356 17 279 8.05e-21 92.8
MsG0780037912.01.T01 MTR_3g010920 29.781 319 158 15 57 366 44 305 8.13e-21 93.2
MsG0780037912.01.T01 MTR_3g030240 26.471 340 161 12 25 347 13 280 9.22e-21 92.8
MsG0780037912.01.T01 MTR_4g031770 29.097 299 163 12 57 347 4 261 2.82e-20 91.3
MsG0780037912.01.T01 MTR_3g024040 29.355 310 162 14 64 365 38 298 3.61e-20 91.3
MsG0780037912.01.T01 MTR_1g054725 28.477 302 164 13 57 346 20 281 4.01e-20 90.9
MsG0780037912.01.T01 MTR_7g007300 26.582 316 172 14 55 365 101 361 7.71e-20 90.9
MsG0780037912.01.T01 MTR_4g133170 24.679 312 191 8 57 363 4 276 9.08e-20 90.1
MsG0780037912.01.T01 MTR_5g009060 32.110 327 172 17 45 348 14 313 1.02e-19 90.1
MsG0780037912.01.T01 MTR_7g070900 44.715 123 59 5 214 330 237 356 1.48e-19 90.1
MsG0780037912.01.T01 MTR_7g070900 27.807 187 77 4 54 231 12 149 2.73e-11 65.1
MsG0780037912.01.T01 MTR_2g426090 26.433 314 189 9 52 352 2 286 2.03e-19 89.4
MsG0780037912.01.T01 MTR_3g024130 30.415 217 114 8 161 366 55 245 2.37e-19 88.2
MsG0780037912.01.T01 MTR_3g009290 33.460 263 134 11 57 318 35 257 2.71e-19 86.7
MsG0780037912.01.T01 MTR_7g021580 29.643 280 128 12 57 327 33 252 4.13e-19 87.0
MsG0780037912.01.T01 MTR_8g073550 31.604 212 115 8 57 262 30 217 4.45e-19 85.5
MsG0780037912.01.T01 MTR_3g058440 28.881 277 153 12 57 324 35 276 5.18e-19 87.0
MsG0780037912.01.T01 MTR_6g021880 29.965 287 161 11 68 345 31 286 5.89e-19 87.8
MsG0780037912.01.T01 MTR_6g013270 29.582 311 176 13 50 353 22 296 1.07e-18 87.0
MsG0780037912.01.T01 MTR_2g426060 26.154 325 171 10 57 352 6 290 1.11e-18 87.0
MsG0780037912.01.T01 MTR_3g011650 31.250 256 121 12 45 290 72 282 1.29e-18 85.5
MsG0780037912.01.T01 MTR_2g028160 26.300 327 192 13 57 365 5 300 2.18e-18 86.3
MsG0780037912.01.T01 MTR_3g010620 28.615 325 166 15 54 366 30 300 2.21e-18 86.3
MsG0780037912.01.T01 MTR_7g066830 32.292 192 99 6 77 263 15 180 2.34e-18 82.4
MsG0780037912.01.T01 MTR_2g043420 36.310 168 66 5 52 209 21 157 2.54e-18 81.6
MsG0780037912.01.T01 MTR_4g024910 37.805 164 73 7 75 231 1 142 2.88e-18 85.1
MsG0780037912.01.T01 MTR_3g010430 27.832 309 153 12 57 346 36 293 4.92e-18 85.1
MsG0780037912.01.T01 MTR_5g069950 34.884 172 78 5 188 356 35 175 5.34e-18 82.4
MsG0780037912.01.T01 MTR_2g024110 26.183 317 182 12 57 365 4 276 1.14e-17 84.0
MsG0780037912.01.T01 MTR_4g117850 30.962 239 131 10 57 292 23 230 1.49e-17 83.6
MsG0780037912.01.T01 MTR_7g061940 36.527 167 77 7 208 366 71 216 1.60e-17 82.0
MsG0780037912.01.T01 MTR_6g081280 34.211 152 79 3 208 356 12 145 2.29e-17 80.9
MsG0780037912.01.T01 MTR_7g091610 40.594 101 46 4 277 366 69 166 2.79e-17 80.9
MsG0780037912.01.T01 MTR_4g020000 35.897 156 80 7 209 356 108 251 2.80e-17 82.4
MsG0780037912.01.T01 MTR_6g004210 30.068 296 162 12 71 346 39 309 4.43e-17 82.4
MsG0780037912.01.T01 MTR_1g055375 28.939 311 167 19 60 357 7 276 5.10e-17 82.0
MsG0780037912.01.T01 MTR_5g046260 25.424 295 141 11 57 346 4 224 5.71e-17 80.9
MsG0780037912.01.T01 MTR_4g116330 27.372 274 166 7 57 324 23 269 7.24e-17 81.3
MsG0780037912.01.T01 MTR_1g058190 27.273 308 149 12 52 346 30 275 7.62e-17 81.3
MsG0780037912.01.T01 MTR_6g042600 35.196 179 77 5 51 228 30 170 8.30e-17 81.6
MsG0780037912.01.T01 MTR_5g057643 31.667 240 119 14 57 285 46 251 8.74e-17 79.7
MsG0780037912.01.T01 MTR_3g030320 35.135 185 83 9 167 347 46 197 9.94e-17 80.1
MsG0780037912.01.T01 MTR_4g089125 63.158 57 21 0 53 109 8 64 1.34e-16 74.7
MsG0780037912.01.T01 MTR_7g034310 37.931 145 71 5 214 356 17 144 1.42e-16 78.6
MsG0780037912.01.T01 MTR_2g078850 29.795 292 162 13 60 347 33 285 1.44e-16 80.5
MsG0780037912.01.T01 MTR_4g063955 33.333 213 107 11 42 241 10 200 1.72e-16 79.0
MsG0780037912.01.T01 MTR_6g048120 27.964 329 165 14 42 346 21 301 1.90e-16 80.5
MsG0780037912.01.T01 MTR_3g024150 27.243 301 154 13 60 346 38 287 2.02e-16 80.1
MsG0780037912.01.T01 MTR_5g070080 28.829 222 137 5 49 261 2 211 2.80e-16 79.7
MsG0780037912.01.T01 MTR_2g017720 40.299 134 60 6 223 352 88 205 3.33e-16 80.1
MsG0780037912.01.T01 MTR_3g103020 28.723 282 156 10 57 331 20 263 3.46e-16 79.3
MsG0780037912.01.T01 MTR_8g013010 28.889 270 137 15 57 313 54 281 3.48e-16 79.0
MsG0780037912.01.T01 MTR_7g067680 27.666 347 178 16 23 365 21 298 6.30e-16 79.0
MsG0780037912.01.T01 MTR_4g021785 28.374 289 145 12 51 328 3 240 7.45e-16 78.2
MsG0780037912.01.T01 MTR_4g023120 29.091 275 156 10 57 328 3 241 7.47e-16 78.6
MsG0780037912.01.T01 MTR_3g009250 30.328 244 119 11 57 290 41 243 1.03e-15 76.3
MsG0780037912.01.T01 MTR_4g053510 50.633 79 30 2 55 125 20 97 1.06e-15 73.6
MsG0780037912.01.T01 MTR_2g426020 25.633 316 177 10 57 352 6 283 1.43e-15 77.8
MsG0780037912.01.T01 MTR_4g116330 27.881 269 158 7 57 324 23 256 1.47e-15 77.8
MsG0780037912.01.T01 MTR_2g034700 24.042 287 176 11 44 318 1 257 1.56e-15 77.4
MsG0780037912.01.T01 MTR_2g021210 29.795 292 157 12 57 345 84 330 2.53e-15 77.4
MsG0780037912.01.T01 MTR_4g117780 32.227 211 103 10 57 260 11 188 2.73e-15 76.6
MsG0780037912.01.T01 MTR_2g060555 34.375 192 75 9 190 366 49 204 2.83e-15 75.9
MsG0780037912.01.T01 MTR_6g048140 27.667 300 140 12 49 324 32 278 3.89e-15 76.6
MsG0780037912.01.T01 MTR_4g121580 30.374 214 119 8 55 260 9 200 7.22e-15 75.5
MsG0780037912.01.T01 MTR_3g023940 27.393 303 162 11 57 346 34 291 1.39e-14 74.7
MsG0780037912.01.T01 MTR_1g046600 30.909 220 114 10 41 232 17 226 1.71e-14 73.9
MsG0780037912.01.T01 MTR_4g023070 29.167 288 139 13 57 328 3 241 1.93e-14 74.3
MsG0780037912.01.T01 MTR_1g068860 23.226 310 184 10 55 352 2 269 7.49e-14 72.4
MsG0780037912.01.T01 MTR_3g096250 30.601 183 95 7 57 230 47 206 8.37e-14 72.0
MsG0780037912.01.T01 MTR_6g007150 30.270 185 110 6 164 346 69 236 9.07e-14 72.0
MsG0780037912.01.T01 MTR_2g031720 26.573 286 144 11 56 324 5 241 1.08e-13 72.0
MsG0780037912.01.T01 MTR_6g027890 27.803 223 121 11 164 366 53 255 1.22e-13 71.6
MsG0780037912.01.T01 MTR_4g094365 28.926 242 130 11 57 290 8 215 1.42e-13 71.6
MsG0780037912.01.T01 MTR_2g435950 29.730 222 112 11 157 365 39 229 1.77e-13 70.9
MsG0780037912.01.T01 MTR_4g122850 27.059 255 142 8 68 313 12 231 2.12e-13 71.2
MsG0780037912.01.T01 MTR_4g023200 28.400 250 124 12 71 313 24 225 2.14e-13 70.9
MsG0780037912.01.T01 MTR_5g046280 30.270 185 94 9 167 346 3 157 2.36e-13 69.7
MsG0780037912.01.T01 MTR_2g028140 24.348 345 182 13 57 363 5 308 2.61e-13 71.2
MsG0780037912.01.T01 MTR_1g055135 28.520 277 157 11 54 324 10 251 3.28e-13 70.5
MsG0780037912.01.T01 MTR_1g115185 27.246 334 182 15 50 366 32 321 3.54e-13 70.5
MsG0780037912.01.T01 MTR_7g078050 36.111 144 74 3 53 195 2 128 4.47e-13 68.9
MsG0780037912.01.T01 MTR_1g112930 27.437 277 151 13 57 324 25 260 4.89e-13 70.1
MsG0780037912.01.T01 MTR_8g030630 36.842 114 48 3 243 356 279 368 4.98e-13 70.5
MsG0780037912.01.T01 MTR_3g010450 29.323 266 137 13 64 325 4 222 7.05e-13 68.2
MsG0780037912.01.T01 MTR_1g097520 29.012 162 85 6 167 324 8 143 8.27e-13 66.2
MsG0780037912.01.T01 MTR_4g023080 31.148 244 123 13 53 290 5 209 1.03e-12 68.9
MsG0780037912.01.T01 MTR_5g070088 29.864 221 129 8 53 261 3 209 1.23e-12 68.9
MsG0780037912.01.T01 MTR_4g023150 28.629 248 132 9 49 290 2 210 1.39e-12 68.6
MsG0780037912.01.T01 MTR_7g069550 25.926 297 159 14 56 324 13 276 2.22e-12 68.2
MsG0780037912.01.T01 MTR_5g070130 27.329 322 185 15 53 365 7 288 2.89e-12 67.8
MsG0780037912.01.T01 MTR_3g096280 25.185 270 146 10 71 324 19 248 3.34e-12 67.4
MsG0780037912.01.T01 MTR_2g010935 34.752 141 60 6 219 356 43 154 3.72e-12 66.2
MsG0780037912.01.T01 MTR_2g026010 27.273 286 144 10 57 324 4 243 3.79e-12 67.4
MsG0780037912.01.T01 MTR_4g023190 30.876 217 113 9 49 261 2 185 4.40e-12 67.0
MsG0780037912.01.T01 MTR_2g048580 27.206 272 148 10 55 324 6 229 4.53e-12 67.0
MsG0780037912.01.T01 MTR_2g027820 47.561 82 35 3 280 356 127 205 6.65e-12 65.9
MsG0780037912.01.T01 MTR_2g021050 27.574 272 143 10 57 316 5 234 8.28e-12 66.2
MsG0780037912.01.T01 MTR_0064s0060 58.182 55 23 0 55 109 15 69 9.61e-12 62.8
MsG0780037912.01.T01 MTR_7g056373 42.857 84 39 1 51 125 16 99 1.16e-11 62.0
MsG0780037912.01.T01 MTR_7g056787 46.789 109 51 4 8 111 31 137 1.20e-11 62.8
MsG0780037912.01.T01 MTR_4g117770 30.769 208 110 8 57 260 11 188 2.29e-11 65.1
MsG0780037912.01.T01 MTR_4g117810 30.769 208 110 8 57 260 11 188 2.29e-11 65.1
MsG0780037912.01.T01 MTR_2g066150 27.778 180 102 8 57 228 12 171 4.50e-11 63.9
MsG0780037912.01.T01 MTR_7g077930 47.692 65 33 1 51 114 13 77 6.63e-11 58.9
MsG0780037912.01.T01 MTR_1004s0010 30.270 185 94 7 163 347 115 264 7.04e-11 63.5
MsG0780037912.01.T01 MTR_2g065860 23.313 326 194 13 55 357 10 302 7.37e-11 63.5
MsG0780037912.01.T01 MTR_7g006360 58.824 51 21 0 58 108 10 60 8.33e-11 62.8
MsG0780037912.01.T01 MTR_7g057090 51.786 56 26 1 50 104 11 66 8.52e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037912.01.T01 AT3G23880 28.216 241 140 7 53 287 10 223 1.35e-17 83.6

Find 88 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTTTGGGTGTTAATATT+TGG 0.142061 7:+36290384 MsG0780037912.01.T01:CDS
AAGAGCATTCGTTCTGTTTC+TGG 0.147560 7:+36290189 MsG0780037912.01.T01:CDS
TATTTCCATAATAAGTTCTT+TGG 0.210647 7:-36289811 None:intergenic
TCTCCCCAAAGAACTTATTA+TGG 0.236112 7:+36289806 MsG0780037912.01.T01:CDS
ATATGGCAAATGAAGAAATT+TGG 0.241025 7:+36290711 MsG0780037912.01.T01:CDS
GTGATTATCTCGCTTGATTT+GGG 0.255984 7:+36290557 MsG0780037912.01.T01:CDS
TCCAACCCTTACTGTATTGA+TGG 0.275503 7:+36290643 MsG0780037912.01.T01:CDS
TGTGATTATCTCGCTTGATT+TGG 0.291883 7:+36290556 MsG0780037912.01.T01:CDS
GGGGTGGAGGTGGTGGTTGA+GGG 0.316634 7:-36289647 None:intergenic
AGTTCTTTGGGGAGAATTAC+CGG 0.343564 7:-36289798 None:intergenic
AAATTTGTTGTCCTTGTGGC+AGG 0.352145 7:-36290215 None:intergenic
TTGAATTCGTGGCAAGGATC+AGG 0.373696 7:-36290077 None:intergenic
ATTTCCATAATAAGTTCTTT+GGG 0.381206 7:-36289810 None:intergenic
GTTTCATCCTGATTCTTATG+AGG 0.424286 7:+36290439 MsG0780037912.01.T01:CDS
GGTTTCGCGCAGATAACTTA+AGG 0.427362 7:-36289929 None:intergenic
GGATGAAACACGACCACCAC+TGG 0.436588 7:-36290425 None:intergenic
TACAATTACCAACATTTCCA+TGG 0.439344 7:+36290104 MsG0780037912.01.T01:CDS
TGTTCAACCTCATAAGAATC+AGG 0.441098 7:-36290446 None:intergenic
ATGCATTGGGCGAAGGAGGT+AGG 0.444594 7:-36289713 None:intergenic
GGCAATCCATCAATACAGTA+AGG 0.444700 7:-36290649 None:intergenic
CGCAGCAATTCTGATGCATT+GGG 0.446683 7:-36289726 None:intergenic
GTCACTGTTATACATGTCAT+TGG 0.451130 7:+36290510 MsG0780037912.01.T01:CDS
TATCGTAACCGAACCCAAAC+AGG 0.454165 7:-36290274 None:intergenic
GGCGACAATTCCAACGCATT+GGG 0.459435 7:-36289753 None:intergenic
TCGGTCAAAGTCTTCACTTT+GGG 0.461528 7:+36290371 MsG0780037912.01.T01:CDS
TGCATTGGGCGAAGGAGGTA+GGG 0.465158 7:-36289712 None:intergenic
GGGATCCTCGGTTCATGTAA+TGG 0.465383 7:+36290125 MsG0780037912.01.T01:CDS
AATTGTAGTATTTGAATTCG+TGG 0.471156 7:-36290088 None:intergenic
TTGAAATTAAATCGACAGTA+AGG 0.478425 7:-36290047 None:intergenic
AGGACCGTGCGTGATGAACT+TGG 0.485841 7:-36290027 None:intergenic
ACGCAGCAATTCTGATGCAT+TGG 0.487274 7:-36289727 None:intergenic
CAACATTTCCATGGGATCCT+CGG 0.492460 7:+36290113 MsG0780037912.01.T01:CDS
ATTTGAGTAATAGTTTAAGT+TGG 0.494957 7:+36290480 MsG0780037912.01.T01:CDS
AGCAAATGAGTCACAGGTAT+GGG 0.497824 7:-36289987 None:intergenic
CTCGGTCAAAGTCTTCACTT+TGG 0.499034 7:+36290370 MsG0780037912.01.T01:CDS
TTTCGATCCGTCTGCAACGC+CGG 0.506667 7:+36289779 MsG0780037912.01.T01:CDS
TAGCAAATGAGTCACAGGTA+TGG 0.507896 7:-36289988 None:intergenic
CACCCTATGTGTCGTCGGTA+CGG 0.509482 7:+36289670 MsG0780037912.01.T01:CDS
TGAATTCGTGGCAAGGATCA+GGG 0.511021 7:-36290076 None:intergenic
AGGCGACAATTCCAACGCAT+TGG 0.520733 7:-36289754 None:intergenic
CGAGGATCCCATGGAAATGT+TGG 0.524021 7:-36290112 None:intergenic
CACTCTAGCAAATGAGTCAC+AGG 0.524862 7:-36289993 None:intergenic
TCCATCAATACAGTAAGGGT+TGG 0.532871 7:-36290644 None:intergenic
AATTTGTTGTCCTTGTGGCA+GGG 0.541946 7:-36290214 None:intergenic
GCATTGGGCGAAGGAGGTAG+GGG 0.543379 7:-36289711 None:intergenic
GAGTAATAGTTTAAGTTGGT+TGG 0.543540 7:+36290484 MsG0780037912.01.T01:CDS
TACCGACGACACATAGGGTG+GGG 0.544642 7:-36289667 None:intergenic
AATTCAAAGTTTCCCAGTGG+TGG 0.553753 7:+36290412 MsG0780037912.01.T01:CDS
TACATGAACCGAGGATCCCA+TGG 0.562361 7:-36290121 None:intergenic
AATTCTGATGCATTGGGCGA+AGG 0.565128 7:-36289720 None:intergenic
CAGCCGTACCGACGACACAT+AGG 0.569678 7:-36289673 None:intergenic
TGATTATCTCGCTTGATTTG+GGG 0.571973 7:+36290558 MsG0780037912.01.T01:CDS
TAGTATTTGAATTCGTGGCA+AGG 0.576936 7:-36290083 None:intergenic
TTCAAAATTTGTTGTCCTTG+TGG 0.577091 7:-36290219 None:intergenic
TCTGATGCATTGGGCGAAGG+AGG 0.581440 7:-36289717 None:intergenic
TTATTATGGAAATACTATCA+CGG 0.583665 7:+36289820 MsG0780037912.01.T01:CDS
AGAATTACCGGCGTTGCAGA+CGG 0.583714 7:-36289786 None:intergenic
ACAATTACCAACATTTCCAT+GGG 0.586791 7:+36290105 MsG0780037912.01.T01:CDS
GGCGTTGCAGACGGATCGAA+AGG 0.590604 7:-36289777 None:intergenic
GCTGCGTCCTCCCAATGCGT+TGG 0.594743 7:+36289743 MsG0780037912.01.T01:CDS
TTCAACAGACACGTACAAGA+TGG 0.601793 7:+36290298 MsG0780037912.01.T01:CDS
CAAAATCACGAGTAAAACAA+AGG 0.602126 7:-36290670 None:intergenic
AGCCGTACCGACGACACATA+GGG 0.602190 7:-36289672 None:intergenic
GCAATCCATCAATACAGTAA+GGG 0.615326 7:-36290648 None:intergenic
GTTTCTGGAACCCTGCCACA+AGG 0.617101 7:+36290204 MsG0780037912.01.T01:CDS
TTTCCATAATAAGTTCTTTG+GGG 0.618019 7:-36289809 None:intergenic
TGAAGTGTGTGAGTAAGTCA+TGG 0.624183 7:+36289868 MsG0780037912.01.T01:CDS
GATGAAACACGACCACCACT+GGG 0.627132 7:-36290424 None:intergenic
ACCGACGACACATAGGGTGG+GGG 0.631173 7:-36289666 None:intergenic
TACATATGAAGTGCGAGATG+TGG 0.632813 7:-36289951 None:intergenic
GAGTCCAAGTTCATCACGCA+CGG 0.637027 7:+36290023 MsG0780037912.01.T01:CDS
AGGTAAAACTTATGCAAGCG+AGG 0.641815 7:-36290254 None:intergenic
GACAATTCCAACGCATTGGG+AGG 0.642056 7:-36289750 None:intergenic
CGTACCGACGACACATAGGG+TGG 0.646704 7:-36289669 None:intergenic
GTTGCAGACGGATCGAAAGG+AGG 0.647353 7:-36289774 None:intergenic
ACATATGAAGTGCGAGATGT+GGG 0.650240 7:-36289950 None:intergenic
AATGACATGTATAACAGTGA+CGG 0.652274 7:-36290508 None:intergenic
TGAAGATCAAGTGAGAAACT+CGG 0.664397 7:+36290352 MsG0780037912.01.T01:CDS
GCAACTTATCACAACATGGA+GGG 0.664750 7:-36290607 None:intergenic
GTACCGACGACACATAGGGT+GGG 0.668110 7:-36289668 None:intergenic
GTAAGGGTTGGAATATTAAG+CGG 0.671422 7:-36290632 None:intergenic
AGGGTTGGAATATTAAGCGG+TGG 0.678584 7:-36290629 None:intergenic
TCAATCCATTACATGAACCG+AGG 0.698186 7:-36290130 None:intergenic
GGCAACTTATCACAACATGG+AGG 0.706450 7:-36290608 None:intergenic
AGAAATTCAAAGTTTCCCAG+TGG 0.722221 7:+36290409 MsG0780037912.01.T01:CDS
TCATTTGCTAGAGTGTACGT+CGG 0.744851 7:+36290001 MsG0780037912.01.T01:CDS
GGTGGCAACTTATCACAACA+TGG 0.751354 7:-36290611 None:intergenic
TCTTATGAGGTTGAACACAG+TGG 0.774072 7:+36290452 MsG0780037912.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTCATTTCATTATA+TGG + Chr7:36290694-36290713 MsG0780037912.01.T01:CDS 15.0%
!! ATTTCCATAATAAGTTCTTT+GGG - Chr7:36289813-36289832 None:intergenic 20.0%
!! ATTTGAGTAATAGTTTAAGT+TGG + Chr7:36290480-36290499 MsG0780037912.01.T01:CDS 20.0%
!! TATTTCCATAATAAGTTCTT+TGG - Chr7:36289814-36289833 None:intergenic 20.0%
!! TTATTATGGAAATACTATCA+CGG + Chr7:36289820-36289839 MsG0780037912.01.T01:CDS 20.0%
!!! ATGTTAAGATTTTATCATGT+TGG + Chr7:36290323-36290342 MsG0780037912.01.T01:CDS 20.0%
! AATTGTAGTATTTGAATTCG+TGG - Chr7:36290091-36290110 None:intergenic 25.0%
! ATATGGCAAATGAAGAAATT+TGG + Chr7:36290711-36290730 MsG0780037912.01.T01:CDS 25.0%
! TTGAAATTAAATCGACAGTA+AGG - Chr7:36290050-36290069 None:intergenic 25.0%
! TTTCCATAATAAGTTCTTTG+GGG - Chr7:36289812-36289831 None:intergenic 25.0%
AATGACATGTATAACAGTGA+CGG - Chr7:36290511-36290530 None:intergenic 30.0%
ACAATTACCAACATTTCCAT+GGG + Chr7:36290105-36290124 MsG0780037912.01.T01:CDS 30.0%
CAAAATCACGAGTAAAACAA+AGG - Chr7:36290673-36290692 None:intergenic 30.0%
TACAATTACCAACATTTCCA+TGG + Chr7:36290104-36290123 MsG0780037912.01.T01:CDS 30.0%
TCACTTTGGGTGTTAATATT+TGG + Chr7:36290384-36290403 MsG0780037912.01.T01:CDS 30.0%
! TGCATAAGTTTTACCTGTTT+GGG + Chr7:36290261-36290280 MsG0780037912.01.T01:CDS 30.0%
! TTGCATAAGTTTTACCTGTT+TGG + Chr7:36290260-36290279 MsG0780037912.01.T01:CDS 30.0%
!! AAGGTGCATTTTGATGAATA+TGG - Chr7:36289913-36289932 None:intergenic 30.0%
!! AGGTGCATTTTGATGAATAT+GGG - Chr7:36289912-36289931 None:intergenic 30.0%
!! GAGTAATAGTTTAAGTTGGT+TGG + Chr7:36290484-36290503 MsG0780037912.01.T01:CDS 30.0%
!! TTCAAAATTTGTTGTCCTTG+TGG - Chr7:36290222-36290241 None:intergenic 30.0%
AGAAATTCAAAGTTTCCCAG+TGG + Chr7:36290409-36290428 MsG0780037912.01.T01:CDS 35.0%
GCAATCCATCAATACAGTAA+GGG - Chr7:36290651-36290670 None:intergenic 35.0%
GTAAGGGTTGGAATATTAAG+CGG - Chr7:36290635-36290654 None:intergenic 35.0%
GTCACTGTTATACATGTCAT+TGG + Chr7:36290510-36290529 MsG0780037912.01.T01:CDS 35.0%
GTGATTATCTCGCTTGATTT+GGG + Chr7:36290557-36290576 MsG0780037912.01.T01:CDS 35.0%
GTTTCATCCTGATTCTTATG+AGG + Chr7:36290439-36290458 MsG0780037912.01.T01:CDS 35.0%
TAGTATTTGAATTCGTGGCA+AGG - Chr7:36290086-36290105 None:intergenic 35.0%
TCTCCCCAAAGAACTTATTA+TGG + Chr7:36289806-36289825 MsG0780037912.01.T01:CDS 35.0%
TGAAGATCAAGTGAGAAACT+CGG + Chr7:36290352-36290371 MsG0780037912.01.T01:CDS 35.0%
TGTGATTATCTCGCTTGATT+TGG + Chr7:36290556-36290575 MsG0780037912.01.T01:CDS 35.0%
TGTTCAACCTCATAAGAATC+AGG - Chr7:36290449-36290468 None:intergenic 35.0%
! TGATTATCTCGCTTGATTTG+GGG + Chr7:36290558-36290577 MsG0780037912.01.T01:CDS 35.0%
!! AAGTTTTACCTGTTTGGGTT+CGG + Chr7:36290266-36290285 MsG0780037912.01.T01:CDS 35.0%
AATTCAAAGTTTCCCAGTGG+TGG + Chr7:36290412-36290431 MsG0780037912.01.T01:CDS 40.0%
ACATATGAAGTGCGAGATGT+GGG - Chr7:36289953-36289972 None:intergenic 40.0%
AGCAAATGAGTCACAGGTAT+GGG - Chr7:36289990-36290009 None:intergenic 40.0%
AGGTAAAACTTATGCAAGCG+AGG - Chr7:36290257-36290276 None:intergenic 40.0%
GCAACTTATCACAACATGGA+GGG - Chr7:36290610-36290629 None:intergenic 40.0%
GGCAATCCATCAATACAGTA+AGG - Chr7:36290652-36290671 None:intergenic 40.0%
TACATATGAAGTGCGAGATG+TGG - Chr7:36289954-36289973 None:intergenic 40.0%
TAGCAAATGAGTCACAGGTA+TGG - Chr7:36289991-36290010 None:intergenic 40.0%
TCAATCCATTACATGAACCG+AGG - Chr7:36290133-36290152 None:intergenic 40.0%
TCCAACCCTTACTGTATTGA+TGG + Chr7:36290643-36290662 MsG0780037912.01.T01:CDS 40.0%
TCCATCAATACAGTAAGGGT+TGG - Chr7:36290647-36290666 None:intergenic 40.0%
TCGGTCAAAGTCTTCACTTT+GGG + Chr7:36290371-36290390 MsG0780037912.01.T01:CDS 40.0%
TCTTATGAGGTTGAACACAG+TGG + Chr7:36290452-36290471 MsG0780037912.01.T01:CDS 40.0%
TGAAGTGTGTGAGTAAGTCA+TGG + Chr7:36289868-36289887 MsG0780037912.01.T01:CDS 40.0%
TTCAACAGACACGTACAAGA+TGG + Chr7:36290298-36290317 MsG0780037912.01.T01:CDS 40.0%
! AGTTCTTTGGGGAGAATTAC+CGG - Chr7:36289801-36289820 None:intergenic 40.0%
! TCATTTGCTAGAGTGTACGT+CGG + Chr7:36290001-36290020 MsG0780037912.01.T01:CDS 40.0%
!! AAATTTGTTGTCCTTGTGGC+AGG - Chr7:36290218-36290237 None:intergenic 40.0%
!! AAGAGCATTCGTTCTGTTTC+TGG + Chr7:36290189-36290208 MsG0780037912.01.T01:CDS 40.0%
!! AATTTGTTGTCCTTGTGGCA+GGG - Chr7:36290217-36290236 None:intergenic 40.0%
AATTCTGATGCATTGGGCGA+AGG - Chr7:36289723-36289742 None:intergenic 45.0%
ACGCAGCAATTCTGATGCAT+TGG - Chr7:36289730-36289749 None:intergenic 45.0%
AGGGTTGGAATATTAAGCGG+TGG - Chr7:36290632-36290651 None:intergenic 45.0%
CAACATTTCCATGGGATCCT+CGG + Chr7:36290113-36290132 MsG0780037912.01.T01:CDS 45.0%
CACTCTAGCAAATGAGTCAC+AGG - Chr7:36289996-36290015 None:intergenic 45.0%
CGCAGCAATTCTGATGCATT+GGG - Chr7:36289729-36289748 None:intergenic 45.0%
CTCGGTCAAAGTCTTCACTT+TGG + Chr7:36290370-36290389 MsG0780037912.01.T01:CDS 45.0%
GGCAACTTATCACAACATGG+AGG - Chr7:36290611-36290630 None:intergenic 45.0%
GGTGGCAACTTATCACAACA+TGG - Chr7:36290614-36290633 None:intergenic 45.0%
GGTTTCGCGCAGATAACTTA+AGG - Chr7:36289932-36289951 None:intergenic 45.0%
TATCGTAACCGAACCCAAAC+AGG - Chr7:36290277-36290296 None:intergenic 45.0%
TGAATTCGTGGCAAGGATCA+GGG - Chr7:36290079-36290098 None:intergenic 45.0%
TTGAATTCGTGGCAAGGATC+AGG - Chr7:36290080-36290099 None:intergenic 45.0%
AGAATTACCGGCGTTGCAGA+CGG - Chr7:36289789-36289808 None:intergenic 50.0%
AGGCGACAATTCCAACGCAT+TGG - Chr7:36289757-36289776 None:intergenic 50.0%
CGAGGATCCCATGGAAATGT+TGG - Chr7:36290115-36290134 None:intergenic 50.0%
GACAATTCCAACGCATTGGG+AGG - Chr7:36289753-36289772 None:intergenic 50.0%
GAGTCCAAGTTCATCACGCA+CGG + Chr7:36290023-36290042 MsG0780037912.01.T01:CDS 50.0%
GATGAAACACGACCACCACT+GGG - Chr7:36290427-36290446 None:intergenic 50.0%
GGCGACAATTCCAACGCATT+GGG - Chr7:36289756-36289775 None:intergenic 50.0%
GGGATCCTCGGTTCATGTAA+TGG + Chr7:36290125-36290144 MsG0780037912.01.T01:CDS 50.0%
TACATGAACCGAGGATCCCA+TGG - Chr7:36290124-36290143 None:intergenic 50.0%
AGGACCGTGCGTGATGAACT+TGG - Chr7:36290030-36290049 None:intergenic 55.0%
ATGCATTGGGCGAAGGAGGT+AGG - Chr7:36289716-36289735 None:intergenic 55.0%
CACCCTATGTGTCGTCGGTA+CGG + Chr7:36289670-36289689 MsG0780037912.01.T01:CDS 55.0%
GGATGAAACACGACCACCAC+TGG - Chr7:36290428-36290447 None:intergenic 55.0%
GTTGCAGACGGATCGAAAGG+AGG - Chr7:36289777-36289796 None:intergenic 55.0%
TACCGACGACACATAGGGTG+GGG - Chr7:36289670-36289689 None:intergenic 55.0%
TCTGATGCATTGGGCGAAGG+AGG - Chr7:36289720-36289739 None:intergenic 55.0%
TGCATTGGGCGAAGGAGGTA+GGG - Chr7:36289715-36289734 None:intergenic 55.0%
TTTCGATCCGTCTGCAACGC+CGG + Chr7:36289779-36289798 MsG0780037912.01.T01:CDS 55.0%
! AGCCGTACCGACGACACATA+GGG - Chr7:36289675-36289694 None:intergenic 55.0%
! GTACCGACGACACATAGGGT+GGG - Chr7:36289671-36289690 None:intergenic 55.0%
!! GTTTCTGGAACCCTGCCACA+AGG + Chr7:36290204-36290223 MsG0780037912.01.T01:CDS 55.0%
ACCCCCACCCTATGTGTCGT+CGG + Chr7:36289665-36289684 MsG0780037912.01.T01:CDS 60.0%
ACCGACGACACATAGGGTGG+GGG - Chr7:36289669-36289688 None:intergenic 60.0%
GCATTGGGCGAAGGAGGTAG+GGG - Chr7:36289714-36289733 None:intergenic 60.0%
GGCGTTGCAGACGGATCGAA+AGG - Chr7:36289780-36289799 None:intergenic 60.0%
! CAGCCGTACCGACGACACAT+AGG - Chr7:36289676-36289695 None:intergenic 60.0%
! CGTACCGACGACACATAGGG+TGG - Chr7:36289672-36289691 None:intergenic 60.0%
ACATAGGGTGGGGGTGGAGG+TGG - Chr7:36289660-36289679 None:intergenic 65.0%
GACACATAGGGTGGGGGTGG+AGG - Chr7:36289663-36289682 None:intergenic 65.0%
GACGACACATAGGGTGGGGG+TGG - Chr7:36289666-36289685 None:intergenic 65.0%
GCTGCGTCCTCCCAATGCGT+TGG + Chr7:36289743-36289762 MsG0780037912.01.T01:CDS 65.0%
! GGGGTGGAGGTGGTGGTTGA+GGG - Chr7:36289650-36289669 None:intergenic 65.0%
TAGGGTGGGGGTGGAGGTGG+TGG - Chr7:36289657-36289676 None:intergenic 70.0%
! GGGGGTGGAGGTGGTGGTTG+AGG - Chr7:36289651-36289670 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 36289639 36290739 36289639 ID=MsG0780037912.01;Name=MsG0780037912.01
Chr7 mRNA 36289639 36290739 36289639 ID=MsG0780037912.01.T01;Parent=MsG0780037912.01;Name=MsG0780037912.01.T01;_AED=0.51;_eAED=0.51;_QI=0|-1|0|1|-1|1|1|0|366
Chr7 exon 36289639 36290739 36289639 ID=MsG0780037912.01.T01:exon:10347;Parent=MsG0780037912.01.T01
Chr7 CDS 36289639 36290739 36289639 ID=MsG0780037912.01.T01:cds;Parent=MsG0780037912.01.T01
Gene Sequence

>MsG0780037912.01.T01

ATGAACATCCCTCAACCACCACCTCCACCCCCACCCTATGTGTCGTCGGTACGGCTGCTGATACTGCGTCAACCCCTACCTCCTTCGCCCAATGCATCAGAATTGCTGCGTCCTCCCAATGCGTTGGAATTGTCGCCTCCTTTCGATCCGTCTGCAACGCCGGTAATTCTCCCCAAAGAACTTATTATGGAAATACTATCACGGTTTAACGTGAAATATCTGATGCGAATGAAGTGTGTGAGTAAGTCATGGAAAAGCTTCATCTCTGATCCCATATTCATCAAAATGCACCTTAAGTTATCTGCGCGAAACCCACATCTCGCACTTCATATGTACAATAAATGCGCTCCCATACCTGTGACTCATTTGCTAGAGTGTACGTCGGAGTCCAAGTTCATCACGCACGGTCCTTACTGTCGATTTAATTTCAAAGACTTCCCTGATCCTTGCCACGAATTCAAATACTACAATTACCAACATTTCCATGGGATCCTCGGTTCATGTAATGGATTGATCTGCTTGCACAAATTTTTTTTTAGTCGTACATCTCAAGAGCATTCGTTCTGTTTCTGGAACCCTGCCACAAGGACAACAAATTTTGAAGCATTAATGTCTCCTCGCTTGCATAAGTTTTACCTGTTTGGGTTCGGTTACGATAATTCAACAGACACGTACAAGATGGTGATGTTAAGATTTTATCATGTTGGTCAGATTGAAGATCAAGTGAGAAACTCGGTCAAAGTCTTCACTTTGGGTGTTAATATTTGGAAAGAAATTCAAAGTTTCCCAGTGGTGGTCGTGTTTCATCCTGATTCTTATGAGGTTGAACACAGTGGTGTGTATTTGAGTAATAGTTTAAGTTGGTTGGTCCGTCACTGTTATACATGTCATTGGAATAATCTCACGATTGAGCAATTTGTGATTATCTCGCTTGATTTGGGGACTGAGACATATACACAATTGTTACTCCCTCCATGTTGTGATAAGTTGCCACCGCTTAATATTCCAACCCTTACTGTATTGATGGATTGCCTTTGTTTTACTCGTGATTTTGAAAAAAACTCATTTCATTATATGGCAAATGAAGAAATTTGGAGTTGA
Protein sequence

>MsG0780037912.01.T01

MNIPQPPPPPPPYVSSVRLLILRQPLPPSPNASELLRPPNALELSPPFDPSATPVILPKELIMEILSRFNVKYLMRMKCVSKSWKSFISDPIFIKMHLKLSARNPHLALHMYNKCAPIPVTHLLECTSESKFITHGPYCRFNFKDFPDPCHEFKYYNYQHFHGILGSCNGLICLHKFFFSRTSQEHSFCFWNPATRTTNFEALMSPRLHKFYLFGFGYDNSTDTYKMVMLRFYHVGQIEDQVRNSVKVFTLGVNIWKEIQSFPVVVVFHPDSYEVEHSGVYLSNSLSWLVRHCYTCHWNNLTIEQFVIISLDLGTETYTQLLLPPCCDKLPPLNIPTLTVLMDCLCFTRDFEKNSFHYMANEEIWS*